|
Name |
Accession |
Description |
Interval |
E-value |
| TonB-Xanth-Caul |
TIGR01782 |
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane ... |
61-915 |
0e+00 |
|
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins]
Pssm-ID: 273804 [Multi-domain] Cd Length: 845 Bit Score: 600.09 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 61 DEIVVQGFRSSIAQSLQAKRLTDMVADVLSAEDIGKFPDKNVAEALQRVPGIVINREFGEGERVSLRGTAPNLTKTLVNG 140
Cdd:TIGR01782 2 DAVQVTGQRASLEKAIDAKRDADSVVDVISAEDIGKLPDVNVAEALQRVPGVSIERDQGEGRYVSVRGLGPSYNRTTLNG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 141 HGIATADWfildqlsATRSFNYLTLPSEIVGKLEVFKSPQADIEEGGIGGTINVNTRRPLDLDRWTVSASAQAVYTERSG 220
Cdd:TIGR01782 82 RTIASTDS-------GGRAFSLDLLPSELVSGVEVYKTPTADMDEGGIGGTVDLRTRSPFDYDGRTLSGSAQGGYNDLAG 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 221 --KVDPQASGMVSWKNADETFGILLGAVYQKRQIRRDGVEVLGYQDVTVGGQTAQ---IPALIGSALFQQTRERYGGNIE 295
Cdd:TIGR01782 155 kdKPGPRGAASYSWTFGDGQFGVLLSASYQKRDFAEDNVETENWGTYTSADGGAQglyFPRGVRYRSYRNDRERKGVNGS 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 296 LQFKPSDDLEIIATGLYSRFNADNVNANYLAWTSNAlGGGGTLTNPTVANGTVVRGTVTSTPGGRAAVYDVIDRdafaDT 375
Cdd:TIGR01782 235 LQWRPSDALELYLDTLYSKYDDDETRQQIEFRTLNG-GSTVITSNQTATSGALVQGTVANLQILVEARYNEEKE----TT 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 376 WSGDLDVTWQvGDSARLHLKGGYTKAKGATNSQ---PFYEGAAPGAFTFDITGRVPQVRFT-GIDPNR---PSDLIFDFA 448
Cdd:TIGR01782 310 TSLTLGGEWT-GDRWTLDGDLGYSKATRDRPDRvtrFFTAPTPGYDFDYRGGPTLTLGTPAdGDDASNytnPANGELRRT 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 449 SLHKIDNIDEETYFYADLEKDvdwGPITALKFGGKYTDHLREARFLATTFGGFFIPlSTRGCGGAPCTSASFAGGSLPDD 528
Cdd:TIGR01782 389 QISYQKAEDSEDAAQLDATFD---GPFTSLKFGVRYRRRDKTNRGSRYRRSIIGAT-GASGLAGVPSDLAGAGLDGGLGG 464
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 529 FLANIaLPGTLTSYFAVDRGKLRSILNGQPASvrerviNPPENYSITERTYGGYVMAKIGGeGEKVRGNFGVRIIRTDQI 608
Cdd:TIGR01782 465 PLTGW-DPADLDAFLNAARGDAAGGGTYTYAS------TAPNTYTVTEDTTAAYAMANFDT-GLRLRGNVGVRYERTDQT 536
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 609 SRGNLLGVPANTPGaianpfGTYLPVEINQSYTDILPSANLAFDVSPTVVVRVAAGRTVTRPDYTDIVPRVSLN----PG 684
Cdd:TIGR01782 537 SDGWQSQPAANGTG------SVLVPVSADRDYTDVLPSLNLAYDLTDDLVLRFAASKTITRPDFGDLAANTSLSddgtGG 610
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 685 ALTGDGGDPNVRPYRANGADLSIEWYPDRDTIVAAALYYRDIQSYIVNRTVQERFPVQTGTPNLsrctlinagqqlyncL 764
Cdd:TIGR01782 611 TVTVSGGNPDLKPYESDNLDLSLEWYFGPGGLLSAAVFYKDIKNFIVTTTSTETNDGGGGLVVA---------------G 675
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 765 FDINRRSNGAGGTN-KGFELQVSRPI------WGGFGAVVNYTYSDAQSESGD--------PIPGNSKHALNLTGYYEND 829
Cdd:TIGR01782 676 VLVSRPVNGGKAGKiRGVELGYQQTFdflpgpLSGFGVQANYTYVDSEADPSVdgvqrrklPLPGLSKNTANATLYYEKG 755
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 830 RLSARLSYNYRSAFFINI----DRASPLNQAATDTLDASISYKLTDNVSLTADAVNLTNTKIFQYAGTTDRFRALYDNGR 905
Cdd:TIGR01782 756 GFSARLSYNYRSDYLLDVggsnINRLDRYVDPRGQLDLSASYQVSDHLSLGLQASNLTNEPSRWYTGGKQRPREYVETGR 835
|
890
....*....|
gi 1799464186 906 IFYAGVRVRY 915
Cdd:TIGR01782 836 TYMLGLRYKF 845
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
87-914 |
4.54e-67 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 236.19 E-value: 4.54e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 87 DVLSAEDIGKFPDKNVAEALQRVPGIVINREF-GEGERVSLRGTAPNLTKTLVNGHGIATADWfildqlsaTRSFNYLTL 165
Cdd:cd01347 3 SVITAEDIEKQPATSLADLLRRIPGVSVTRGGgGGGSTISIRGFGPDRTLVLVDGLPLASSNY--------GRGVDLNTI 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 166 PSEIVGKLEVFKSPQADI-EEGGIGGTINVNTRRPLDLD--RWTVSASAQAVYTERSGKVDpqASGMVSWknaDETFGIL 242
Cdd:cd01347 75 PPELIERVEVLKGPSSALyGSGAIGGVVNIITKRPTDEFggSVTAGYGSDNSGSSGGGGFD--VSGALAD---DGAFGAR 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 243 LGAVYQKRQIRRDGVEVLGYQDvtvggqtaqipaligsalfqqtRERYGGNIELQFKPSDDLEIIATGLYSRFNADNVNA 322
Cdd:cd01347 150 LYGAYRDGDGTIDGDGQADDSD----------------------EERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGG 207
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 323 NYLAWTSNALGGGGTLTNPTVANGTVVRGTVtstpggRAAVYDVIDRDAFADTWSGDLDVTWQvgdsaRLHLKGGYTKAK 402
Cdd:cd01347 208 TLPANGTGSSLGGGPSSNTNGDRDWDYRDRY------RKRASLGLEHDLNDTGWTLRANLSYS-----YTDNDGDPLILN 276
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 403 GATNSQPFYEGAAPGAFTFDITGRVpqvrftgidpnrpsdlifdfaslhkidnideetyFYADLEKDVDWGPIT-ALKFG 481
Cdd:cd01347 277 GGNNAAGGDLGRSGYSSERDTTQLG----------------------------------FDAGLNAPFGTGPVAhTLTLG 322
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 482 GKYTdhlrearflattfggffiplstrgcggapctsasfaggslpddflanialpgtltsyfavdrgklrsilngqpasv 561
Cdd:cd01347 323 VEYR---------------------------------------------------------------------------- 326
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 562 rervinppeNYSITERTYGGYVMAKIGGeGEKVRGNFGVRIIRTDQISRGNLLGVPANTpgaianpfgtylpveinQSYT 641
Cdd:cd01347 327 ---------REELDEKQTALYAQDTIEL-TDDLTLTLGLRYDHYDQDSKDTIAGGTTAK-----------------KSYS 379
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 642 DILPSANLAFDVSPTVVVRVAAGRTVTRPDYTDIVPRVSLNPGALtgdGGDPNVRPYRANGADLSIEWYPDRDTIVAAAL 721
Cdd:cd01347 380 HWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHGGTAA---VGNPNLKPEKSKQYELGLKYDPGDGLTLSAAL 456
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 722 YYRDIQSYIVNrtvqerfpvqtgtpnlsrctlinagQQLYNCLFDINRRSNGAGGTNKGFELQVSRPIWGGFGAVVNYTY 801
Cdd:cd01347 457 FRIDIKNEIVS-------------------------TPTNTGLGLVTVYVNGGKARIRGVELEASYDLTDGLGLTGSYTY 511
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 802 SDA------QSESGDPIPGNSKHALNLTGYYE--NDRLSARLSYNYRSAFFINIDR-ASPLNQAATDTLDASISYKLTDN 872
Cdd:cd01347 512 TDTevkrtdGATTGNRLPGIPKHTANLGLDYElpDEGLTAGGGVRYRGKQYADTANgNNTVKVPGYTLVDLSASYQFTKN 591
|
810 820 830 840
....*....|....*....|....*....|....*....|...
gi 1799464186 873 VSLTADAVNLTNTKIFQYAGTTDRFRALYD-NGRIFYAGVRVR 914
Cdd:cd01347 592 LTLRLGVNNLFDKDYYTSLSVRGSGLYGYYgPGRTYYLSVSYK 634
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
61-901 |
9.36e-38 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 150.75 E-value: 9.36e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 61 DEIVVQGFRSSiaqslQAKRLTDMVADVLSAEDIGKFPDKNVAEALQRVPGIVINREFGEGERVSLRG--TAPNLTKTLV 138
Cdd:COG1629 2 EEVVVTATRTD-----ESLQDVPGSVSVISREQLEDQPATDLGDLLRRVPGVSVTSAGGGAGQISIRGfgGGGNRVLVLV 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 139 NGHGIATADWFildqlsatrSFNYLTLPSEIVGKLEVFKSPQADIE-EGGIGGTINVNTRRPLDLDRWTVSASAQAVYTE 217
Cdd:COG1629 77 DGVPLNDPSGG---------DGGLSYIDPEDIERVEVLRGPSSALYgSGALGGVINIVTKKPKDGKGGEVSASYGSYGTY 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 218 RsgkvdpqASGMVSWKNadETFGILLGAVYQKRQirrdgvevlGYQDvtvggqtaqipaligsalfQQTRERYGGNIELQ 297
Cdd:COG1629 148 R-------ASLSLSGGN--GKLAYRLSASYRDSD---------GYRD-------------------NSDSDRYNLRAKLG 190
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 298 FKPSDDLEIIATGLYSRFNADNvnanylawtsnalggggtltnptvaNGTVVRGTVTSTPGGRAAVYDVIDRDAFADTWS 377
Cdd:COG1629 191 YQLGDDTRLTLSASYSDSDQDS-------------------------PGYLTLAALRPRGAMDDGTNPYSNDTDDNTRDR 245
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 378 GDLDVTWQ-VGDSARLHLKGGYTKAKGATNSQPFYEGAAPGAFTFDitgrvpqvrftgidpnrpsdlifdfaslhkidNI 456
Cdd:COG1629 246 YSLSLEYEhLGDGLKLSASAYYRYDDTDLDSDFTPTPADGGTLEQT--------------------------------DF 293
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 457 DEETY-FYADLEKDVDWGPITALKFGGKYTDHLREARFLATTFGgffiplstrgcggapctsasfaggslpddflanial 535
Cdd:COG1629 294 DNRTYgLELRLTYDLGFGGKHTLLVGLDYQRQDLDGSGYPLDLG------------------------------------ 337
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 536 pgtltsyfavdrgklrsilngqpaSVRERVINPPENYSITERTYGGYVMAKIGGeGEKVRGNFGVRIIRTDQISRGNLLG 615
Cdd:COG1629 338 ------------------------SGSLPTLTSGADDDGTTTSLALYAQDTYKL-TDKLTLTAGLRYDYVSYDVDDTVTG 392
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 616 VPANTPgaianpfgtylpveiNQSYTDILPSANLAFDVSPTVVVRVAAGRTVTRPDYTDIVPRvslnpGALTGDGGDPNV 695
Cdd:COG1629 393 TDSASG---------------SRSYSAFSPSLGLTYQLSPNLSLYASYSRGFRAPTFGELYAN-----GTDPYSVGNPDL 452
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 696 RPYRANGADLSIEWYPDRDTI-VAAALYYRDIQSYIVNRTVQERFPVQTgtpnlsrcTLINAGQQlynclfdinrrsnga 774
Cdd:COG1629 453 KPETSTNYELGLRYRLLDGRLsLSLALFYSDVDNEILSVPLPNDSGFST--------YYTNAGKA--------------- 509
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 775 ggTNKGFELQVSRPIWGGFGAVVNYTYSDAQ---------SESGDPIPGNSKHALNLTGYYE-NDRLSARLSYNYRSAFF 844
Cdd:COG1629 510 --RSYGVELELSYQLTPGLSLNASYSYTDAKfdddtdgsaDLDGNRLPGVPPLTANLGLTYEfPGGWSLGLGVRYVGDRY 587
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*..
gi 1799464186 845 INiDRASPLNQAATDTLDASISYKLTDNVSLTADAVNLTNTKIFQYAGTTDRFRALY 901
Cdd:COG1629 588 LD-DANTQGAPGGYTLVDLGAGYRFGDNLTLSLGVDNLFDKKYATSLSVRASNVRGF 643
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
419-914 |
4.14e-30 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 125.27 E-value: 4.14e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 419 FTFDITGRVPQVRFTGIDPNRPSDLIFDFASLHKIDNIDEETYFYADLEKDVDWgpITALKFGGKYTDHLREARFLATTF 498
Cdd:pfam00593 24 YTDGLDLGLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSW--LSTLRLGLRYSSLDGDYTSNSSGL 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 499 GGFF-IPLSTRGCGGAPCTSASFAGGSLPDDFLANIALPGTLTSYFAVDRGKLRSILNGQPasvrerviNPPENYSITER 577
Cdd:pfam00593 102 SGAGdYLSDDRLYGLYGLDGDLELSLDLSHDLLLGVELRTAGLDYRRLDDDAYDPYDPANP--------SSSSYSDTTTD 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 578 TYGGYVMAKIGGeGEKVRGNFGVRIIRTDQISRGNLLGVPAntpgaianpfgtylpveINQSYTDILPSANLAFDVSPTV 657
Cdd:pfam00593 174 SYGLYLQDNIKL-TDRLTLTLGLRYDHYSTDGDDGNGGGDN-----------------FSRSYSAFSPRLGLVYKPTDNL 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 658 VVRVAAGRTVTRPDYTDIVPRVSlNPGALTGDGGDPNVRPYRANGADLSIEWYPDRDTIvAAALYYRDIQSYIVNRTVqe 737
Cdd:pfam00593 236 SLYASYSRGFRAPSLGELYGSGS-GGGGGAVAGGNPDLKPETSDNYELGLKYDDGRLSL-SLALFYIDIKNLITSDPD-- 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 738 rfpvqTGTPNLSRCTLINAGQQlynclfdinrrsngaggTNKGFELQVSRPIWGGFGAVVNYTYSDAQ-----SESGDPI 812
Cdd:pfam00593 312 -----GPGLGGTVYTYTNVGKA-----------------RIRGVELELSGRLWGLGLSGGGYTYTDADddadaDDTGNPL 369
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 813 PGNSKHALNLTGYYE--NDRLSARLSYNY-RSAFFINIDRASPLNQAATDTLDASISYKLTDNVSLTADAVNLTNTKIFQ 889
Cdd:pfam00593 370 PNVPRHTANLGLTYDfpLGGWGARLGARYvGSGERRYGDAANTFKTPGYTLVDLSAGYRLNKNLTLRLGVNNLFDKYYKR 449
|
490 500
....*....|....*....|....*.
gi 1799464186 890 YAGTTD-RFRALYDNGRIFYAGVRVR 914
Cdd:pfam00593 450 YYSSGGgNLGGYPGPGRTFYLGLSYK 475
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
58-336 |
3.03e-06 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 51.04 E-value: 3.03e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 58 QNGDEIVVQGfrSSIAQSLQAKRLTdmvADVLSAEDIGKFPDKNVAEALQRVPGIVINREFGEGERVSLRGTAPNLTKTL 137
Cdd:PRK10064 28 DDGETMVVTA--SAVEQNLKDAPAS---ISVITQEDLQRKPVQNLKDVLKEVPGVQLTNEGDNRKGVSIRGLDSSYTLIL 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 138 VNGHGIatadwfilDQLSATRSFNYLTL---PSEIVGKLEVFKSPQADIE-EGGIGGTINVNTRRPldLDRWTVSASAQA 213
Cdd:PRK10064 103 IDGKRV--------NSRNAVFRHNDFDLnwiPVDAIERIEVVRGPMSSLYgSDALGGVVNIITKKI--GQKWHGTVTVDT 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 214 VYTERSGKVDPQASGM-VSWKNADETFGILLGAVYQKRQirRDGVEvlgYQDVTVGGQTAQIPALigsalfqQTRErygG 292
Cdd:PRK10064 173 TIQEHRDRGDTYNGQFfTSGPLIDGVLGMKAYGSLAKRE--KDDPQ---NSTTTDTGETPRIEGF-------TSRD---G 237
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1799464186 293 NIELQFKPSDDLEIIATGLYSR--FNADNVNANYLAWTSNALGGGG 336
Cdd:PRK10064 238 NVEFAWTPNQNHDFTAGYGFDRqdRDSDSLDKNRLERQNYSLSHNG 283
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| TonB-Xanth-Caul |
TIGR01782 |
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane ... |
61-915 |
0e+00 |
|
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins]
Pssm-ID: 273804 [Multi-domain] Cd Length: 845 Bit Score: 600.09 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 61 DEIVVQGFRSSIAQSLQAKRLTDMVADVLSAEDIGKFPDKNVAEALQRVPGIVINREFGEGERVSLRGTAPNLTKTLVNG 140
Cdd:TIGR01782 2 DAVQVTGQRASLEKAIDAKRDADSVVDVISAEDIGKLPDVNVAEALQRVPGVSIERDQGEGRYVSVRGLGPSYNRTTLNG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 141 HGIATADWfildqlsATRSFNYLTLPSEIVGKLEVFKSPQADIEEGGIGGTINVNTRRPLDLDRWTVSASAQAVYTERSG 220
Cdd:TIGR01782 82 RTIASTDS-------GGRAFSLDLLPSELVSGVEVYKTPTADMDEGGIGGTVDLRTRSPFDYDGRTLSGSAQGGYNDLAG 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 221 --KVDPQASGMVSWKNADETFGILLGAVYQKRQIRRDGVEVLGYQDVTVGGQTAQ---IPALIGSALFQQTRERYGGNIE 295
Cdd:TIGR01782 155 kdKPGPRGAASYSWTFGDGQFGVLLSASYQKRDFAEDNVETENWGTYTSADGGAQglyFPRGVRYRSYRNDRERKGVNGS 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 296 LQFKPSDDLEIIATGLYSRFNADNVNANYLAWTSNAlGGGGTLTNPTVANGTVVRGTVTSTPGGRAAVYDVIDRdafaDT 375
Cdd:TIGR01782 235 LQWRPSDALELYLDTLYSKYDDDETRQQIEFRTLNG-GSTVITSNQTATSGALVQGTVANLQILVEARYNEEKE----TT 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 376 WSGDLDVTWQvGDSARLHLKGGYTKAKGATNSQ---PFYEGAAPGAFTFDITGRVPQVRFT-GIDPNR---PSDLIFDFA 448
Cdd:TIGR01782 310 TSLTLGGEWT-GDRWTLDGDLGYSKATRDRPDRvtrFFTAPTPGYDFDYRGGPTLTLGTPAdGDDASNytnPANGELRRT 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 449 SLHKIDNIDEETYFYADLEKDvdwGPITALKFGGKYTDHLREARFLATTFGGFFIPlSTRGCGGAPCTSASFAGGSLPDD 528
Cdd:TIGR01782 389 QISYQKAEDSEDAAQLDATFD---GPFTSLKFGVRYRRRDKTNRGSRYRRSIIGAT-GASGLAGVPSDLAGAGLDGGLGG 464
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 529 FLANIaLPGTLTSYFAVDRGKLRSILNGQPASvrerviNPPENYSITERTYGGYVMAKIGGeGEKVRGNFGVRIIRTDQI 608
Cdd:TIGR01782 465 PLTGW-DPADLDAFLNAARGDAAGGGTYTYAS------TAPNTYTVTEDTTAAYAMANFDT-GLRLRGNVGVRYERTDQT 536
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 609 SRGNLLGVPANTPGaianpfGTYLPVEINQSYTDILPSANLAFDVSPTVVVRVAAGRTVTRPDYTDIVPRVSLN----PG 684
Cdd:TIGR01782 537 SDGWQSQPAANGTG------SVLVPVSADRDYTDVLPSLNLAYDLTDDLVLRFAASKTITRPDFGDLAANTSLSddgtGG 610
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 685 ALTGDGGDPNVRPYRANGADLSIEWYPDRDTIVAAALYYRDIQSYIVNRTVQERFPVQTGTPNLsrctlinagqqlyncL 764
Cdd:TIGR01782 611 TVTVSGGNPDLKPYESDNLDLSLEWYFGPGGLLSAAVFYKDIKNFIVTTTSTETNDGGGGLVVA---------------G 675
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 765 FDINRRSNGAGGTN-KGFELQVSRPI------WGGFGAVVNYTYSDAQSESGD--------PIPGNSKHALNLTGYYEND 829
Cdd:TIGR01782 676 VLVSRPVNGGKAGKiRGVELGYQQTFdflpgpLSGFGVQANYTYVDSEADPSVdgvqrrklPLPGLSKNTANATLYYEKG 755
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 830 RLSARLSYNYRSAFFINI----DRASPLNQAATDTLDASISYKLTDNVSLTADAVNLTNTKIFQYAGTTDRFRALYDNGR 905
Cdd:TIGR01782 756 GFSARLSYNYRSDYLLDVggsnINRLDRYVDPRGQLDLSASYQVSDHLSLGLQASNLTNEPSRWYTGGKQRPREYVETGR 835
|
890
....*....|
gi 1799464186 906 IFYAGVRVRY 915
Cdd:TIGR01782 836 TYMLGLRYKF 845
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
87-914 |
4.54e-67 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 236.19 E-value: 4.54e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 87 DVLSAEDIGKFPDKNVAEALQRVPGIVINREF-GEGERVSLRGTAPNLTKTLVNGHGIATADWfildqlsaTRSFNYLTL 165
Cdd:cd01347 3 SVITAEDIEKQPATSLADLLRRIPGVSVTRGGgGGGSTISIRGFGPDRTLVLVDGLPLASSNY--------GRGVDLNTI 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 166 PSEIVGKLEVFKSPQADI-EEGGIGGTINVNTRRPLDLD--RWTVSASAQAVYTERSGKVDpqASGMVSWknaDETFGIL 242
Cdd:cd01347 75 PPELIERVEVLKGPSSALyGSGAIGGVVNIITKRPTDEFggSVTAGYGSDNSGSSGGGGFD--VSGALAD---DGAFGAR 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 243 LGAVYQKRQIRRDGVEVLGYQDvtvggqtaqipaligsalfqqtRERYGGNIELQFKPSDDLEIIATGLYSRFNADNVNA 322
Cdd:cd01347 150 LYGAYRDGDGTIDGDGQADDSD----------------------EERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGG 207
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 323 NYLAWTSNALGGGGTLTNPTVANGTVVRGTVtstpggRAAVYDVIDRDAFADTWSGDLDVTWQvgdsaRLHLKGGYTKAK 402
Cdd:cd01347 208 TLPANGTGSSLGGGPSSNTNGDRDWDYRDRY------RKRASLGLEHDLNDTGWTLRANLSYS-----YTDNDGDPLILN 276
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 403 GATNSQPFYEGAAPGAFTFDITGRVpqvrftgidpnrpsdlifdfaslhkidnideetyFYADLEKDVDWGPIT-ALKFG 481
Cdd:cd01347 277 GGNNAAGGDLGRSGYSSERDTTQLG----------------------------------FDAGLNAPFGTGPVAhTLTLG 322
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 482 GKYTdhlrearflattfggffiplstrgcggapctsasfaggslpddflanialpgtltsyfavdrgklrsilngqpasv 561
Cdd:cd01347 323 VEYR---------------------------------------------------------------------------- 326
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 562 rervinppeNYSITERTYGGYVMAKIGGeGEKVRGNFGVRIIRTDQISRGNLLGVPANTpgaianpfgtylpveinQSYT 641
Cdd:cd01347 327 ---------REELDEKQTALYAQDTIEL-TDDLTLTLGLRYDHYDQDSKDTIAGGTTAK-----------------KSYS 379
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 642 DILPSANLAFDVSPTVVVRVAAGRTVTRPDYTDIVPRVSLNPGALtgdGGDPNVRPYRANGADLSIEWYPDRDTIVAAAL 721
Cdd:cd01347 380 HWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHGGTAA---VGNPNLKPEKSKQYELGLKYDPGDGLTLSAAL 456
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 722 YYRDIQSYIVNrtvqerfpvqtgtpnlsrctlinagQQLYNCLFDINRRSNGAGGTNKGFELQVSRPIWGGFGAVVNYTY 801
Cdd:cd01347 457 FRIDIKNEIVS-------------------------TPTNTGLGLVTVYVNGGKARIRGVELEASYDLTDGLGLTGSYTY 511
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 802 SDA------QSESGDPIPGNSKHALNLTGYYE--NDRLSARLSYNYRSAFFINIDR-ASPLNQAATDTLDASISYKLTDN 872
Cdd:cd01347 512 TDTevkrtdGATTGNRLPGIPKHTANLGLDYElpDEGLTAGGGVRYRGKQYADTANgNNTVKVPGYTLVDLSASYQFTKN 591
|
810 820 830 840
....*....|....*....|....*....|....*....|...
gi 1799464186 873 VSLTADAVNLTNTKIFQYAGTTDRFRALYD-NGRIFYAGVRVR 914
Cdd:cd01347 592 LTLRLGVNNLFDKDYYTSLSVRGSGLYGYYgPGRTYYLSVSYK 634
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
61-901 |
9.36e-38 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 150.75 E-value: 9.36e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 61 DEIVVQGFRSSiaqslQAKRLTDMVADVLSAEDIGKFPDKNVAEALQRVPGIVINREFGEGERVSLRG--TAPNLTKTLV 138
Cdd:COG1629 2 EEVVVTATRTD-----ESLQDVPGSVSVISREQLEDQPATDLGDLLRRVPGVSVTSAGGGAGQISIRGfgGGGNRVLVLV 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 139 NGHGIATADWFildqlsatrSFNYLTLPSEIVGKLEVFKSPQADIE-EGGIGGTINVNTRRPLDLDRWTVSASAQAVYTE 217
Cdd:COG1629 77 DGVPLNDPSGG---------DGGLSYIDPEDIERVEVLRGPSSALYgSGALGGVINIVTKKPKDGKGGEVSASYGSYGTY 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 218 RsgkvdpqASGMVSWKNadETFGILLGAVYQKRQirrdgvevlGYQDvtvggqtaqipaligsalfQQTRERYGGNIELQ 297
Cdd:COG1629 148 R-------ASLSLSGGN--GKLAYRLSASYRDSD---------GYRD-------------------NSDSDRYNLRAKLG 190
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 298 FKPSDDLEIIATGLYSRFNADNvnanylawtsnalggggtltnptvaNGTVVRGTVTSTPGGRAAVYDVIDRDAFADTWS 377
Cdd:COG1629 191 YQLGDDTRLTLSASYSDSDQDS-------------------------PGYLTLAALRPRGAMDDGTNPYSNDTDDNTRDR 245
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 378 GDLDVTWQ-VGDSARLHLKGGYTKAKGATNSQPFYEGAAPGAFTFDitgrvpqvrftgidpnrpsdlifdfaslhkidNI 456
Cdd:COG1629 246 YSLSLEYEhLGDGLKLSASAYYRYDDTDLDSDFTPTPADGGTLEQT--------------------------------DF 293
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 457 DEETY-FYADLEKDVDWGPITALKFGGKYTDHLREARFLATTFGgffiplstrgcggapctsasfaggslpddflanial 535
Cdd:COG1629 294 DNRTYgLELRLTYDLGFGGKHTLLVGLDYQRQDLDGSGYPLDLG------------------------------------ 337
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 536 pgtltsyfavdrgklrsilngqpaSVRERVINPPENYSITERTYGGYVMAKIGGeGEKVRGNFGVRIIRTDQISRGNLLG 615
Cdd:COG1629 338 ------------------------SGSLPTLTSGADDDGTTTSLALYAQDTYKL-TDKLTLTAGLRYDYVSYDVDDTVTG 392
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 616 VPANTPgaianpfgtylpveiNQSYTDILPSANLAFDVSPTVVVRVAAGRTVTRPDYTDIVPRvslnpGALTGDGGDPNV 695
Cdd:COG1629 393 TDSASG---------------SRSYSAFSPSLGLTYQLSPNLSLYASYSRGFRAPTFGELYAN-----GTDPYSVGNPDL 452
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 696 RPYRANGADLSIEWYPDRDTI-VAAALYYRDIQSYIVNRTVQERFPVQTgtpnlsrcTLINAGQQlynclfdinrrsnga 774
Cdd:COG1629 453 KPETSTNYELGLRYRLLDGRLsLSLALFYSDVDNEILSVPLPNDSGFST--------YYTNAGKA--------------- 509
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 775 ggTNKGFELQVSRPIWGGFGAVVNYTYSDAQ---------SESGDPIPGNSKHALNLTGYYE-NDRLSARLSYNYRSAFF 844
Cdd:COG1629 510 --RSYGVELELSYQLTPGLSLNASYSYTDAKfdddtdgsaDLDGNRLPGVPPLTANLGLTYEfPGGWSLGLGVRYVGDRY 587
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*..
gi 1799464186 845 INiDRASPLNQAATDTLDASISYKLTDNVSLTADAVNLTNTKIFQYAGTTDRFRALY 901
Cdd:COG1629 588 LD-DANTQGAPGGYTLVDLGAGYRFGDNLTLSLGVDNLFDKKYATSLSVRASNVRGF 643
|
|
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
48-876 |
6.26e-31 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 129.59 E-value: 6.26e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 48 QNSGSQNSGGQNGDEIVVQGFRSSiaqslQAKRLTDMVADVLSAEDIGKFPDKNVAEALQRVPGIVINREFGEG--ERVS 125
Cdd:COG4771 15 QAADALAEDATELEEVVVTATRTE-----QSLSDAPASVSVITAEEIEKLGATDLADALRLLPGVSVTRSGGRGgsSGIS 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 126 LRGTAPNLTKTLVNGHGIATAdwfildqlSATRSFNYLTLPSEIVGKLEVFKSPQADI-EEGGIGGTINVNTRRPLDLDR 204
Cdd:COG4771 90 IRGLGGDRVLVLIDGVPVNNP--------ALGGGGDLSYIPPDDIERIEVIRGPASALyGSDAIGGVINIITKKPTDELE 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 205 WTVSASAQAVYTERSgkvdpQASGMVSWKNadETFGILLGAVYQKRQIRRDgvevlgyqdvtvggqtaqipALIGSALFQ 284
Cdd:COG4771 162 GSVSLGYGSNGNGTY-----SGSLSLGGPG--DKLSFLLSGSYRDRDGYLD--------------------YRNGGFVGN 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 285 QTRERYGGNIELQFKPSDDLEIIATGLYSRFNADNVNANYlawtsnalggggtltnptvangtvvrGTVTSTPGGRAAVY 364
Cdd:COG4771 215 SGYERYNLNAKLGYRLSDNHRLSLSGGYSRQDRDGGPPTL--------------------------GDTEISSDNAGDRD 268
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 365 DVIDRDAFADTWSGDLDVTWQvgdsarlhLKGGYTKakgaTNSQPFYEGAAPGAFTFDITgrvpqvrftgidpnrpsdli 444
Cdd:COG4771 269 TTTDRGNYSLRYNGDLGDNLD--------LSLYYSR----TDRDSTNGSLGGSTGSFSDS-------------------- 316
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 445 fdfaslhkidnidEETYFYADLEKDVDWGPITALKFGGKYTDHLREARFLATtfggffiplstrgcggapctsasfaggs 524
Cdd:COG4771 317 -------------DDTTYGLELDLTYPLGGNHTLTLGAEYRYDDLDSSSFLG---------------------------- 355
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 525 lpddflanialpgtltsyfavdrgklrsilngqpasvrervinppeNYSITERTYGGYVMAKIGGeGEKVRGNFGVRIIR 604
Cdd:COG4771 356 ----------------------------------------------GADASRDTYGLFAQDEWKL-TDKLTLTAGLRYDY 388
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 605 TDQISRGNllgvpantpgaianpfgtylpveinqsYTDILPSANLAFDVSPTVVVRVAAGRTVTRPDYTDIVPRVSLNPG 684
Cdd:COG4771 389 YSTFGASN---------------------------YTAFSPRLGLRYDLSDNLTLRASYGRGFRAPSLAELYGSGTGTPG 441
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 685 ALTgdGGDPNVRPYRANGADLSIEWYPDRDTIVA-AALYYRDIQSYIVNRTVQERFPvqtgtpnlsrctlinagqqlync 763
Cdd:COG4771 442 RYV--LGNPDLKPETSDNYELGLEYRLGNGGLSLsLTGFYTDIKDLIVLVPVGPGPG----------------------- 496
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 764 lfDINRRSNGAGGTNKGFELQVSRPIWGGFGAVVNYTYSDAQSESGD---PIPGNSKHALNLTGYYENDR--LSARLSYN 838
Cdd:COG4771 497 --DVLQYENVGKARTYGLELELKYRLGKGLTLTASYTYLDSKIDDGDtgePLPNVPPHKANLGLDYRLPKwwLLLLLTRY 574
|
810 820 830
....*....|....*....|....*....|....*...
gi 1799464186 839 YRSAFFINIDRASPLNQAATDTLDASISYKLTDNVSLT 876
Cdd:COG4771 575 YGGRYVTPPSGRLEGYTPGYTLLDLRASYKLTKNLTLS 612
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
419-914 |
4.14e-30 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 125.27 E-value: 4.14e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 419 FTFDITGRVPQVRFTGIDPNRPSDLIFDFASLHKIDNIDEETYFYADLEKDVDWgpITALKFGGKYTDHLREARFLATTF 498
Cdd:pfam00593 24 YTDGLDLGLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSW--LSTLRLGLRYSSLDGDYTSNSSGL 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 499 GGFF-IPLSTRGCGGAPCTSASFAGGSLPDDFLANIALPGTLTSYFAVDRGKLRSILNGQPasvrerviNPPENYSITER 577
Cdd:pfam00593 102 SGAGdYLSDDRLYGLYGLDGDLELSLDLSHDLLLGVELRTAGLDYRRLDDDAYDPYDPANP--------SSSSYSDTTTD 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 578 TYGGYVMAKIGGeGEKVRGNFGVRIIRTDQISRGNLLGVPAntpgaianpfgtylpveINQSYTDILPSANLAFDVSPTV 657
Cdd:pfam00593 174 SYGLYLQDNIKL-TDRLTLTLGLRYDHYSTDGDDGNGGGDN-----------------FSRSYSAFSPRLGLVYKPTDNL 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 658 VVRVAAGRTVTRPDYTDIVPRVSlNPGALTGDGGDPNVRPYRANGADLSIEWYPDRDTIvAAALYYRDIQSYIVNRTVqe 737
Cdd:pfam00593 236 SLYASYSRGFRAPSLGELYGSGS-GGGGGAVAGGNPDLKPETSDNYELGLKYDDGRLSL-SLALFYIDIKNLITSDPD-- 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 738 rfpvqTGTPNLSRCTLINAGQQlynclfdinrrsngaggTNKGFELQVSRPIWGGFGAVVNYTYSDAQ-----SESGDPI 812
Cdd:pfam00593 312 -----GPGLGGTVYTYTNVGKA-----------------RIRGVELELSGRLWGLGLSGGGYTYTDADddadaDDTGNPL 369
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 813 PGNSKHALNLTGYYE--NDRLSARLSYNY-RSAFFINIDRASPLNQAATDTLDASISYKLTDNVSLTADAVNLTNTKIFQ 889
Cdd:pfam00593 370 PNVPRHTANLGLTYDfpLGGWGARLGARYvGSGERRYGDAANTFKTPGYTLVDLSAGYRLNKNLTLRLGVNNLFDKYYKR 449
|
490 500
....*....|....*....|....*.
gi 1799464186 890 YAGTTD-RFRALYDNGRIFYAGVRVR 914
Cdd:pfam00593 450 YYSSGGgNLGGYPGPGRTFYLGLSYK 475
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
61-915 |
1.29e-23 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 106.94 E-value: 1.29e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 61 DEIVVQGFRSSIAQSLQAKRltdmVADVLSAEDIGKFPDKNVAEALQRVPGIVINREFGEGER--VSLRGTAPNLTK--- 135
Cdd:COG4772 24 ETVVVTGSRAAEARLKDVPG----SVSVVDREELENQAATSLREVLRRVPGVNVQEEDGFGLRpnIGIRGLGPRRSRgit 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 136 TLVNGHGIATAdwfildQLSATRSfnYLTLPSEIVGKLEVFK-------SPQAdieeggIGGTINVNTRRPLDLDRWTVS 208
Cdd:COG4772 100 LLEDGIPIAPA------PYGDPAA--YYFPDLERMERIEVLRgaaalryGPQT------VGGAINFVTRTIPTAFGGELR 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 209 ASAQAvYTERSGKVdpQASGMVswknadETFGILLGAVYQKRQirrdgvevlGYQDvtvggQTAQipaligsalfqqtrE 288
Cdd:COG4772 166 VTGGS-FGYRRTHA--SVGGTV------GNFGYLVEYSRKRGD---------GFRD-----NSGF--------------D 208
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 289 RYGGNIELQFKPSDDLEIIATGLYSRFNADNvnanYLAWTSNALggggtLTNPTVANGtvvrgtvtstpggraavydviD 368
Cdd:COG4772 209 INDFNAKLGYRLSDRQELTLKFQYYDEDANT----PGGLTDAQF-----DADPRQSYR---------------------P 258
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 369 RDAF-ADTWSGDLDVTWQVGDSARLHLKGGYTKAKgaTNSQPFYEGAAPGAFTFDITGRVPQVRFTGIDPNrpsdlifdf 447
Cdd:COG4772 259 ADQFdTRRTQLSLRYEHQLSDNTTLTTTAYYNDFS--RNWYIRQNTADPNTPGLGLRGNPRGYRSYGIEPR--------- 327
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 448 aslhkidnideetyfyadLEKDVDWGPITA-LKFGGKYtDHLREARFlattfggffiplstrgcggapctsasfaggslp 526
Cdd:COG4772 328 ------------------LTHRFELGGVPHtLEVGLRY-HREEEDRK--------------------------------- 355
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 527 ddflanialpGTLTSYFAVDRGklrsilngqpASVRERVINPPENYSitertygGYVMAKIggegeKVRGNF----GVRI 602
Cdd:COG4772 356 ----------QYVNTYGQGRSG----------AGLRRDRRFSADALA-------AYAQNRF-----ELTGRLtltpGLRY 403
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 603 --IRTDQISRGNLLGVPANTPgaianpfgtylpveiNQSYTDILPSANLAFDVSPTVVVRVAAGRTVTRPDYTDIVPRvs 680
Cdd:COG4772 404 ehIRRDRTDRYSTRTGGDDSG---------------SNSYSEFLPGLGLLYQLTDNLQLYANVSRGFEPPTFGDLAYG-- 466
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 681 lnpgaltgDGGDPNVRPYRANGADLSIEWYPDRDTIVAAALYYRDIQSYIVNRTVqerfpvqtgtPNLSRCTLINAGQql 760
Cdd:COG4772 467 --------NGGNPDLKPEKSWNYELGTRGRIGNGLSAEVALFYIDYDNELGSCSA----------AGGDRSTFTNAGE-- 526
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 761 ynclfdinrrsngagGTNKGFELQVSRPIWGGFG----AVVNYTYSDA-------QSESGDPIPGNSKHALNLTGYYEND 829
Cdd:COG4772 527 ---------------TRHQGLELALDYDLLKGGGlglpLFAAYTYTDAeftsdfgPVFAGNRLPYVPRHQLTAGLGYEHG 591
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 830 RLSARLSYNYRSAFFinidrASPLNQAAT---------DTLDASISYKLTDNVSLTADAVNLTNTkifQYAGttdRFRAL 900
Cdd:COG4772 592 GWTANLNGRYVSEQF-----TDAANTVADgsfgkipsyTVLDLSASYDFGKNLSLFAGVNNLFDK---RYIA---SRAPN 660
|
890 900
....*....|....*....|.
gi 1799464186 901 YDNG------RIFYAGVRVRY 915
Cdd:COG4772 661 YAAGirpgppRTVYAGLRLKF 681
|
|
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
100-915 |
7.24e-15 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 78.77 E-value: 7.24e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 100 KNVAEALQRVPGIVINR-EFGEGERVSLRGtAPNLTKTLVNGhgiatadwfildqlsaTRSFNYLTLPSEIVGKLEVFKS 178
Cdd:COG4774 27 TSLADALRNVPGVTFGAgEGGNGDSFSIRG-FSASGDIYVDG----------------LRDPGQYRRDTFNLERVEVLKG 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 179 PQA-DIEEGGIGGTINVNTRRPLDLDRWTVSASAQAvYTERSGKVDpqASGMVSwknadETFGILLGAVYQKRQIRRDGV 257
Cdd:COG4774 90 PASvLYGRGSPGGVINLVTKRPTDEPFTEVTLTYGS-DGQRRATLD--VNGPLG-----DDLAYRLNGMYRDSDSYRDGV 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 258 EvlgyqdvtvggqtaqipaligsalfqqtRERYGGNIELQFKPSDDLEIIATGLYSRfnaDNVNANYlawtsnalgggGT 337
Cdd:COG4774 162 D----------------------------NDRWGIAPSLTWRLGDRTRLTLDYEYQD---DDRTPDY-----------GV 199
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 338 ltnPTVANGTVV---RGTVTSTPGGRAAVydvidrdafaDTWSGDLDVTWQVGDSARLHLKGGYTKAK-GATNSQPFYeG 413
Cdd:COG4774 200 ---PAVANGRPVdvdRSTFYGQPDDYSDS----------ETDSATLRLEHDFNDNWTLRNALRYSDYDrDYRNTYPTG-G 265
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 414 AAPGAFTFDITGRVPQVRFTGIDpnrpsdlifdfaslhkidnideetyfyADLEKDVDWGPIT-ALKFGGKYTDHLREAR 492
Cdd:COG4774 266 NATGTVTRSAYRRDQDNDTLSNQ---------------------------TDLTGKFDTGGVKhTLLAGVEYSREDSDNA 318
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 493 flattfggffiplSTRGCGGAPCTSasfaggslpddflanialpgtltsyfavdrgklrsILNGQPASVRERVINPPENY 572
Cdd:COG4774 319 -------------RYSGGGTAPTVN-----------------------------------LYNPVYGAPVTGPTLGGADN 350
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 573 SITERTYGGYVMAKIGgEGEKVRGNFGVRIIRTDQISRGNLLGVPANtpgaianpfgtylpveiNQSYTDILPSANLAFD 652
Cdd:COG4774 351 DSRTDTTGLYLQDTIS-LTDRWSLLAGLRYDRFDTDYTDRTTGATTS-----------------SYDDSAFSPRAGLVYK 412
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 653 VSPTVVVRVAAGRtvtrpdytdivprvSLNP--GALTGDGGDPNVRPYRANGADLSIEW-YPDRDTIVAAALYYrdiqsy 729
Cdd:COG4774 413 PTPNLSLYASYST--------------SFNPggGAPSLSNAGQALDPEKSRQYEVGVKWdLLDGRLSLTAALFR------ 472
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 730 ivnrtvQERFPVQTGTPNLSRcTLINAGQQlynclfdinrrsngaggTNKGFELQVS-RPI--WGGFGavvNYTYSDAQ- 805
Cdd:COG4774 473 ------IEKTNVRTTDPANPG-VYVQTGEQ-----------------RSRGVELEATgELTpgWSVLA---GYTYLDAEi 525
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 806 ------SESGDPIPGNSKHALNLTGYYE--NDRLSARLSYNYRSAFFINIDrasplNQAATD---TLDASISYKLTDNVS 874
Cdd:COG4774 526 tksanaANVGNRLPNVPRHSASLWTTYDlpLPGLTLGGGVRYVGSRYADAA-----NTVKLPsytRFDAGASYRLNKNLT 600
|
810 820 830 840
....*....|....*....|....*....|....*....|.
gi 1799464186 875 LTADAVNLTNTKIfqYAGTTDRFRALYDNGRIFYAGVRVRY 915
Cdd:COG4774 601 LRLNVNNLTDKRY--YASAYGSGYVTPGAPRTVLLSASYRF 639
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
63-339 |
1.36e-14 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 74.91 E-value: 1.36e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 63 IVVQGFRSSiaqslQAKRLTDMVADVLSAEDIGKFPDKNVAEALQRVPGIVINR--EFGEGERVSLRGTAPNLTKTLVNG 140
Cdd:COG4206 1 VVVTATRLE-----QSKSDLTGSVTVIDAEELERSGATSLADALRRVPGVQVSSsgGPGSAASISIRGLGSNQTLVLIDG 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 141 HGIATADwfildqlsaTRSFNYLTLPSEIVGKLEVFKSPQADIE-EGGIGGTINVNTRRPLDLDRWTVSAS--------A 211
Cdd:COG4206 76 VPLNDPS---------LGGVDLSLIPPDDIERIEVLKGAASALYgSDAIGGVINITTKKGKKGFKGSVSASygsfgtrrL 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 212 QAVYTERSGKVDPQASGmvSWKNADEtFGILLGAVYQKRQIRRDGVEV-LGY---QDVTVGGQTAQIPALIGSALFQQTR 287
Cdd:COG4206 147 SASLSGGAGKFSYSLSA--SYRRSDG-YRYNDPDLRNNDGYENTSLNArLGYklgDNGSLSLSGGYSDSERGYPGAVGSD 223
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1799464186 288 ERYGGNIELQFKPSDDLEIIATGLYSRFNADNVNANYLAWTSNALGGGGTLT 339
Cdd:COG4206 224 RNLRLSLSLEYKLSDGWSLLLLAYYYYDRDYEDGGGDSAGTSNTDGARAGLS 275
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
78-191 |
1.56e-13 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 67.29 E-value: 1.56e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 78 AKRLTDMVADVLSAEDIGKFPDKNVAEALQRVPGI-VINREFGEGERVSLRGTAPNLTKTLVNGHGIATadwfildqlSA 156
Cdd:pfam07715 1 DLRDTPGSVSVVTAEDIEDQGATNLADALRGVPGVsVSSGGGGGGSSISIRGFGSNRVLVLVDGVPLNS---------GG 71
|
90 100 110
....*....|....*....|....*....|....*.
gi 1799464186 157 TRSFNYLTLPSEIVGKLEVFKSPQADIE-EGGIGGT 191
Cdd:pfam07715 72 GGSVDLNSIDPEDIERVEVLKGPASALYgSGAIGGV 107
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
101-915 |
2.27e-13 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 74.16 E-value: 2.27e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 101 NVAEALQRVPGIVINREFGEG-ERVSLRGTapNLTKTLVNGHGIAtadwfildqlsatrSFNYLTLPSEIVGKLEVFKSP 179
Cdd:COG4773 84 TLDDALRNVPGVTVSSYDGGGrDSFSIRGF--SIDNYLRDGLPLG--------------GFGGGQPDTANLERVEVLKGP 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 180 QADIE-EGGIGGTINVNTRRPLDLDRWTVSASAQAvYTERSGKVDpqASGMVswkNADETFGILLGAVYQKRQIRRDGVE 258
Cdd:COG4773 148 AGLLYgAGSPGGLVNLVTKRPTAEPQGEVSLSAGS-WDTYRATAD--VGGPL---NEDGTLRYRLNAAYEDGDSFRDGVD 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 259 vlgyqdvtvggqtaqipaligsalfqqtRERYGGNIELQFKPSDDLEIIATGLYSRFNADNvnanylawTSNALGGGGTL 338
Cdd:COG4773 222 ----------------------------NRRTLIAPSLDWDLTDDTTLTLGAEYQDDDSTG--------DRGFLPLDGTL 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 339 TNptvangtVVRGTVTSTPggraavYDVIDRDafadTWSGDLDVTWQVGDSARLHLKGGYTKAKgaTNSQPFYEGAAPGA 418
Cdd:COG4773 266 LD-------LPRSTNLGEP------WDYYDTE----TTTLFAELEHRFNDDWSLRANARYSDSD--RDGRSAYAYGAPDA 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 419 FTFDITGRVpqvrftgidpnrpsdliFDFASLHKIDNIDeetyfyADLEKDVDWGPITA-LKFGGKYTDhlREARFLATT 497
Cdd:COG4773 327 ATGTLTRYA-----------------SARDGDSRSDSLD------ANLNGKFETGGLEHtLLVGADYSR--YDSDSDSAT 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 498 FGGFfiplstrgcggapctsasfaggSLPDDFLANIALPGTLTSYfavdrgklrsilngqpasvrervinppenYSITER 577
Cdd:COG4773 382 AGTI----------------------NIYNPVYGNLPEPDFDASD-----------------------------TDTTTR 410
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 578 TYGGYVMAKIGgEGEKVRGNFGVRIIRTDQISRGNLLGVPANtpgaianpfgtylpveinQSYTDILPSANLAFDVSPTV 657
Cdd:COG4773 411 QTGLYAQDQIS-LTDRLSLLLGGRYDWYETDSTNRLGGSTTS------------------YDDSAFTPRAGLVYDLTPGL 471
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 658 VVRVAagrtvtrpdYTDivprvSLNPGALTGDGGDPnVRPYRANGADLSIEW-YPDRDTIVAAALYyrdiqsyivnRTVQ 736
Cdd:COG4773 472 SLYAS---------YSE-----SFEPQSGADNNGNP-LDPETGKQYEAGVKGeLFDGRLNATLAVF----------DITQ 526
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 737 ERFPVQTGTPNlsrCTLINAGQQlynclfdinrrsngaggTNKGFELQVSRPIWGGFGAVVNYTYSDAQ------SESGD 810
Cdd:COG4773 527 KNVATTDPDNP---NFYVQVGEV-----------------RSRGVELELSGELTPGLNLIAGYTYTDAKitkdadALEGK 586
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 811 PIPGNSKHALNLTGYYE-----NDRLSARLSYNYRSAFFIniDRASPLNQAATDTLDASISYKLTDNVSLTADAVNLTNT 885
Cdd:COG4773 587 RLTNVPRHTASLWTTYRfpsgaLKGLGLGGGVRYVGERYG--DAANTFTLPSYTLVDAGARYDLGKNWTLQLNVNNLFDK 664
|
810 820 830
....*....|....*....|....*....|
gi 1799464186 886 KifQYAGTTDRFRALYDNGRIFYAGVRVRY 915
Cdd:COG4773 665 K--YYASSGSRGYVYYGAPRNVRLSLSYKF 692
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
58-336 |
3.03e-06 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 51.04 E-value: 3.03e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 58 QNGDEIVVQGfrSSIAQSLQAKRLTdmvADVLSAEDIGKFPDKNVAEALQRVPGIVINREFGEGERVSLRGTAPNLTKTL 137
Cdd:PRK10064 28 DDGETMVVTA--SAVEQNLKDAPAS---ISVITQEDLQRKPVQNLKDVLKEVPGVQLTNEGDNRKGVSIRGLDSSYTLIL 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 138 VNGHGIatadwfilDQLSATRSFNYLTL---PSEIVGKLEVFKSPQADIE-EGGIGGTINVNTRRPldLDRWTVSASAQA 213
Cdd:PRK10064 103 IDGKRV--------NSRNAVFRHNDFDLnwiPVDAIERIEVVRGPMSSLYgSDALGGVVNIITKKI--GQKWHGTVTVDT 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 214 VYTERSGKVDPQASGM-VSWKNADETFGILLGAVYQKRQirRDGVEvlgYQDVTVGGQTAQIPALigsalfqQTRErygG 292
Cdd:PRK10064 173 TIQEHRDRGDTYNGQFfTSGPLIDGVLGMKAYGSLAKRE--KDDPQ---NSTTTDTGETPRIEGF-------TSRD---G 237
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1799464186 293 NIELQFKPSDDLEIIATGLYSR--FNADNVNANYLAWTSNALGGGG 336
Cdd:PRK10064 238 NVEFAWTPNQNHDFTAGYGFDRqdRDSDSLDKNRLERQNYSLSHNG 283
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
679-911 |
1.86e-05 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 48.61 E-value: 1.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 679 VSLNPGALTGDG-------GDPNVRPYRANGADLSIEWYPDRDTIVAAALYYRDIQSYIvnrTVQERFPVQTGTPNlsrC 751
Cdd:PRK13513 428 ATDNWGQLTGGGglpalilGNSDLKPEKSISQEIGILWDNQENLNASVTLFNTDFKDKI---TEVRNCDTTNTDGQ---C 501
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 752 TLinaGQQLYNclFdINRRSNGAGGTNKGFELQVSRPIWGGFGAVVNYTYSDAQSESGD----PIPGNSKHALNLTGYYE 827
Cdd:PRK13513 502 VF---NGINYD--F-ISDRINVDKANMRGVEATFNWDINQAWSLATNYTFTQSEQKSGAfagqPLNQMPKHMANATLNWQ 575
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 828 -NDRLSARLSYNYRSAFFINIDRASPLNQAATDT-LDASISYKLTDNVSLTADAVNLTNTKIfqyagTTDRFRALYDnGR 905
Cdd:PRK13513 576 tTEDFATWIRINYRGKTSEYLNRTSMGSGTPSYTfVDLGASYQLTKELRLMGGVYNLLDKRV-----DIDVNDKVLD-GR 649
|
....*.
gi 1799464186 906 IFYAGV 911
Cdd:PRK13513 650 RYMVGA 655
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
88-250 |
2.03e-05 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 48.23 E-value: 2.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 88 VLSAEDIGKFPDKNVAEALQRVPGIVINrefGEGER--VSLRGTAPNLTKTLVNGH--------------GIATAdWfil 151
Cdd:PRK13483 56 VITREDLENRFYRDLTDALLDVPGVVVT---GGGDRtdISLRGMGSQYTLILVDGKrqssretrpnsdgpGVEQA-W--- 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 152 dqlsatrsfnylTLPSEIVGKLEVFKSPQADIE-EGGIGGTINVNTRRplDLDRWTVSASAQAVYTER--SGKVDpQASG 228
Cdd:PRK13483 129 ------------TPPLAAIERIEVIRGPMSSLYgSDAIGGVINIITRK--VPNEWQGEVRLDTTLQENsdSGNVY-QANF 193
|
170 180
....*....|....*....|..
gi 1799464186 229 MVSWKNADETFGILLGAVYQKR 250
Cdd:PRK13483 194 FVNGPLIKDLLGLQLYGQYTQR 215
|
|
| OMP_b-brl_3 |
pfam14905 |
Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB ... |
571-912 |
2.66e-05 |
|
Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.
Pssm-ID: 434300 [Multi-domain] Cd Length: 407 Bit Score: 47.65 E-value: 2.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 571 NYSITERTYGGYVMAkiGGEGEKVRGNFGVR----IIRTDQISRGNllgvpantpgaianpfgtylpvEINQSYTDILPS 646
Cdd:pfam14905 107 DFDYKENIYAAYASY--SKKFGKWSYQAGLRaeytDIDGDSVTTNE----------------------TFKRNYFNLFPS 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 647 ANLAFDVSP--TVVVRVAAGRTVTRPDYTDIVP-RVSLNPGALTgdGGDPNVRPYRANGADLSIEWypdrDTIVAAALYY 723
Cdd:pfam14905 163 ASLSYKLNDnnSLQLSLYYRRIINRPSYWDLNPfRNYSDPYNYS--QGNPNLKPEYTNSFELGYTY----KWKLSLSLSY 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 724 RDIQSYIVnrtvqeRFPVQTGTPNLSRCTLINAGQQlynclfdinrrsngaggTNKGFELQVSRPIWGGFGAVVNYTYSD 803
Cdd:pfam14905 237 RYTNDVIQ------QTFITDDNDNVTYTTYENLGKS-----------------NSYGLELSASFNPTKWWSLNGNLNGYY 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 804 AQSESGDPIPGNskhaLNLTGYYENDRLSARLSYNYRsaFFINIDRASPLNQAATDT-----LDASISYK-LTDNVSLTA 877
Cdd:pfam14905 294 NKYKIDGSLNSD----FSNFGFNWNLNNTFTLPKGWS--LQLNGNYRSPRVTGQGKIkpfysLDLGLSKSfLKKKLTLSL 367
|
330 340 350
....*....|....*....|....*....|....*....
gi 1799464186 878 DAVNLTNT-KIFQYAGTTDRFRALYDN---GRIFYAGVR 912
Cdd:pfam14905 368 NVNDIFNTrKFRSTTNYDNGFIQSYNNkwdSRSVRLSLS 406
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
779-887 |
2.86e-05 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 47.85 E-value: 2.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 779 KGFELQVSRPIWGGFGAVVNYTYSDAQSESGD----PIPGNSKHALNLTGYYE-NDRLSARLSYNYRSaffiniDRASPL 853
Cdd:PRK13483 523 QGVEASLSYPITSTLSLSGNYTYTDSEQKSGAykgsPLNQLPKHLFQASLNWEpTDRLNSWARVNYRG------EESQPT 596
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 1799464186 854 NQAATDTL--------DASISYKLTDNVSLTADAVNLTNTKI 887
Cdd:PRK13483 597 TGPSSSSFiapsytflDLGANYQLTDNLKLSAGIYNLFDKEI 638
|
|
| btuB |
PRK10641 |
TonB-dependent vitamin B12 receptor BtuB; |
86-209 |
1.04e-04 |
|
TonB-dependent vitamin B12 receptor BtuB;
Pssm-ID: 236730 [Multi-domain] Cd Length: 614 Bit Score: 46.14 E-value: 1.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 86 ADVLSAEDIGKFPDKNVAEALQRVPGIVINREFGEGERVSL--RGTAPNLTKTLVNGhgiatadwFILDQLSATRSFNYL 163
Cdd:PRK10641 46 TTVVTRDDIDRWQSKSVNDVLRRLPGVDIAQNGGLGQLSSLfiRGTNSSHVLVLIDG--------VRLNQAGISGSADLS 117
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1799464186 164 TLPSEIVGKLEVFKSPQADIE-EGGIGGTINVNTRRplDLDRWTVSA 209
Cdd:PRK10641 118 QIPISLVQRIEYIRGPRSAVYgSDAIGGVVNIITTR--DKPGTTLSA 162
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
766-884 |
3.81e-04 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 44.24 E-value: 3.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 766 DINRRS--NGAGGTNKGFELQVSRPIWG-GFGAVVNYTYSDAQSESGD----PIPGNSKHALNLTGYYE-NDRLSARLSY 837
Cdd:PRK13486 511 NDNTNSyvNSGKARLHGVEFAGTLPLWSeDVTLSLNYTWTRSEQRDGDnkgaPLSYTPEHMVNAKLNWQiTEEVASWLGA 590
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 838 NYRSA---FFINIDRASPLNQAATD----------TLDASISYKLTDNVSLTADAVNLTN 884
Cdd:PRK13486 591 RYRGKtprFTQNYSSLSAVQKKVYDekgeylkawtVVDAGLSWKMTDALTLNAAVNNLLN 650
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
86-340 |
8.49e-04 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 43.17 E-value: 8.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 86 ADVLSAEDIGKFPDKNVAEALQRVPGIVINREFGEGER--VSLRGTAPNltktlvnghgiATADWFILDQLSATRSFNYL 163
Cdd:TIGR01783 6 VSVITRQELEDQQAGSLSEALQRVPGVVVGGSGGTTQFgnITIRGFGLE-----------VDIDNVYLDGVPLLSRGNLA 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 164 TLPSEIVGKLEVFKSPQADIEEGGI-GGTINVNTRRPLDLDRwtvsASAQAVYTERSGKvdpQASGMVS-WKNADETFGI 241
Cdd:TIGR01783 75 IVDPAMVERVEVLRGPASLLYGGSApGGVINIVTKRPQDEPK----GSVTFGAGTRSGY---RTAFDLGgPLGADGTFRG 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 242 LLGAVYQKRQ------------------IRRDGVEVL----GYQDVTVGGQTAQIPALIGSALFQQTRERYGGNIelQFK 299
Cdd:TIGR01783 148 RLNGARQDGDsfydgageetrlgatatdWQLDDRTLLrlgaYYQKERDRGGYGGLPASGGTSGRDLSSDRYLGTS--SNR 225
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1799464186 300 PSDDLEIIATGL-----------------YSRFNADNVNANYLAWTSNALGGGGTLTN 340
Cdd:TIGR01783 226 NYDDREYLSYGLsleyqfndvwtgkqnlrYSYFDTDSNQVQASGYSSDGGLFGRSLTV 283
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
88-219 |
1.16e-03 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 42.83 E-value: 1.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 88 VLSAEDIGKFPDKNVAEALQRVPGIVIN----------REFG--------EGERVSLRGTAPNltktlVNGHGIATAdWf 149
Cdd:PRK13513 58 VVTREQLENKAYRDVTDALKDVPGVVVTgggstsdisiRGMAakytlilvDGKRVDTRSTRPN-----SDGSGIEQG-W- 130
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1799464186 150 ildqlsatrsfnylTLPSEIVGKLEVFKSPQADIE-EGGIGGTINVNTRRPldLDRWTVSASAQAVYTERS 219
Cdd:PRK13513 131 --------------LPPLAAIERIEVVRGPMSSLYgSDAMGGVINIITRKV--QKEWHGSLRADATLQEDS 185
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
771-915 |
1.99e-03 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 42.01 E-value: 1.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 771 SNGAGGT-NKGFELQVSRPIWGGFGAVVNYTYSDAQSE-------SGDPIPGNSKHALNLTGYYEND----RLSARLSYN 838
Cdd:TIGR01783 494 SVNAGKTrNRGVELEARGYLTPGLSLSAGYTYTDAEFTedtngdtQGNTVPFVPKHTASLWASYAPPvgdnGLTLGGGVQ 573
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1799464186 839 YRSAFfiNIDRASPLNQAATDTLDASISYKLT--DNVSLTADAVNLTNTKIFQYAGTTDRFRALYDN-GRIFYAGVRVRY 915
Cdd:TIGR01783 574 YTGKA--YVDGGNTGKVPSYTVVDLSVRYDLTkkKNLTLALNVNNLFDRDYYTSGYRWGPSAYIYPGaPRTVGLSVSYDF 651
|
|
| |
