|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-328 |
8.13e-155 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 437.72 E-value: 8.13e-155
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 1 LIFTFSLLLGTTITISSNHWAMAWTGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASALILFSSMTNAWHTGQWDL 80
Cdd:MTH00112 7 LIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWNTGQWDI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 81 TQLTHPTSCLILTAALAMKLGLAPFHFWFPEVLQGTSLATGLLLSTAMKLPPITLLFLTSHSLDSTLLTTMAVLSAALGG 160
Cdd:MTH00112 87 TQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAILSTLIGG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 161 WVGLNQTQIRKILAFSSIAHLGWMAIILSYSPKLTLLNFYLYSLVTAAVFLTLNTTKTLKLSTLMTSWTKTPALNTALLL 240
Cdd:MTH00112 167 WGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTLNTTLML 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 241 TLLSLAGLPPLTGFLPKWFILQELTKQDMALSAVALSLLSLLSLFFYLRLAYCTTITLPPHTTSHMKQWRTNKPTNISIA 320
Cdd:MTH00112 247 TLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPKKNTLTA 326
|
....*...
gi 1797022896 321 ILTTLSIT 328
Cdd:MTH00112 327 TLTTLSTL 334
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
2-327 |
2.85e-128 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 370.41 E-value: 2.85e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 2 IFTFSLLLGTTITISSNHWAMAWTGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASALILFSSMTNAWHTGQWDLT 81
Cdd:MTH00070 8 ILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWFTGEWTIM 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 82 QLTHPTSCLILTAALAMKLGLAPFHFWFPEVLQGTSLATGLLLSTAMKLPPITLLFLTSHSLDSTLLTTMAVLSAALGGW 161
Cdd:MTH00070 88 NMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLLSTLIGGW 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 162 VGLNQTQIRKILAFSSIAHLGWMAIILSYSPKLTLLNFYLYSLVTAAVFLTLNTTKTLKLSTLMTSWTKTPALNTALLLT 241
Cdd:MTH00070 168 GGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTLTSMMMLT 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 242 LLSLAGLPPLTGFLPKWFILQELTKQDMALSAVALSLLSLLSLFFYLRLAYCTTITLPPHTTSHMKQWRTNKPTNISIAI 321
Cdd:MTH00070 248 LLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNKTNNLLSL 327
|
....*.
gi 1797022896 322 LTTLSI 327
Cdd:MTH00070 328 TIILSL 333
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
2-328 |
1.01e-125 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 364.13 E-value: 1.01e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 2 IFTFSLLLGTTITISSNHWAMAWTGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASALILFSSMTNAWHTGQWDLT 81
Cdd:MTH00135 8 ILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWLTGQWDIQ 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 82 QLTHPTSCLILTAALAMKLGLAPFHFWFPEVLQGTSLATGLLLSTAMKLPPITLLFLTSHSlDSTLLTTMAVLSAALGGW 161
Cdd:MTH00135 88 QMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLTSTLVGGW 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 162 VGLNQTQIRKILAFSSIAHLGWMAIILSYSPKLTLLNFYLYSLVTAAVFLTLNTTKTLKLSTLMTSWTKTPALNTALLLT 241
Cdd:MTH00135 167 GGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPALTALTPLI 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 242 LLSLAGLPPLTGFLPKWFILQELTKQDMALSAVALSLLSLLSLFFYLRLAYCTTITLPPHTTSHMKQWRTNKP-TNISIA 320
Cdd:MTH00135 247 LLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPSTqLTLPLA 326
|
....*...
gi 1797022896 321 ILTTLSIT 328
Cdd:MTH00135 327 ISTTATLM 334
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-326 |
3.67e-109 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 321.80 E-value: 3.67e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 1 LIFTFSLLLGTTITISSNHWAMAWTGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASALILFSSMTNAWHTGQWDL 80
Cdd:MTH00105 7 IIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMYSGQWTI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 81 TQLTHPTSCLILTAALAMKLGLAPFHFWFPEVLQGTSLATGLLLSTAMKLPPITLLFLTSHSLDSTLLTTMAVLSAALGG 160
Cdd:MTH00105 87 TKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAILSILIGG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 161 WVGLNQTQIRKILAFSSIAHLGWMAIILSYSPKLTLLNFYLYSLVTAAVFLTLNTTKTLKLSTLMTSWTKTPALNTALLL 240
Cdd:MTH00105 167 WGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLMTSLILL 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 241 TLLSLAGLPPLTGFLPKWFILQELTKQDMALSAVALSLLSLLSLFFYLRLAYCTTITLPPhTTSHMK-QWR-TNKPTNIS 318
Cdd:MTH00105 247 TLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFP-STNNMKmKWQfENTKPMTL 325
|
....*...
gi 1797022896 319 IAILTTLS 326
Cdd:MTH00105 326 LPTLIILS 333
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-327 |
3.64e-96 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 288.79 E-value: 3.64e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 1 LIFTFSLLLGTTITISSNHWAMAWTGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASALILFSSMTNAWHTGQWDL 80
Cdd:MTH00200 7 PLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWTSGQWGI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 81 TQLTHPTSCLILTAALAMKLGLAPFHFWFPEVLQGTSLATGLLLSTAMKLPPITLLFLTSHSLDSTLLTTMAVLSAALGG 160
Cdd:MTH00200 87 SEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLLSVLVGG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 161 WVGLNQTQIRKILAFSSIAHLGWMAIILSYSPKLTLLNFYLYSLVTAAVFLTLNTTKTLKLSTLMTSWTKTPALNTALLL 240
Cdd:MTH00200 167 WGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPILSMLLGL 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 241 TLLSLAGLPPLTGFLPKWFILQELTKQDMALSAVALSLLSLLSLFFYLRLAYCTTITLPPHTTSHMKQWRTNKPTNISIA 320
Cdd:MTH00200 247 TLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSNSNLLVG 326
|
....*..
gi 1797022896 321 ILTTLSI 327
Cdd:MTH00200 327 LLLLLSI 333
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-327 |
2.56e-83 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 256.01 E-value: 2.56e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 1 LIFTFSLLLGTTITISSNHWAMAWTGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASALILFSSMTNAWHTGQWDL 80
Cdd:MTH00041 7 IFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWLSGSWSI 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 81 TQLTHPTSCLILTAALAMKLGLAPFHFWFPEVLQGTSLATGLLLSTAMKLPPITLLFLTSHSLDSTLLTTMAVLSAALGG 160
Cdd:MTH00041 87 NGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGILSVLVGG 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 161 WVGLNQTQIRKILAFSSIAHLGWMAIILSYSPKLTLLNFYLYSLVTAAVFLTLNTTKTLKLSTLMTSWTKTPALNTALLL 240
Cdd:MTH00041 167 WGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPISAFLFIL 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 241 TLLSLAGLPPLTGFLPKWFILQELTKQDMALSAVALSLLSLLSLFFYLRLAYCTTITLPPHTTSHMKQWRTNKPTNISIA 320
Cdd:MTH00041 247 SILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGNITVYGV 326
|
....*..
gi 1797022896 321 ILTTLSI 327
Cdd:MTH00041 327 ILSILSS 333
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-327 |
4.12e-57 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 188.11 E-value: 4.12e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 1 LIFTFSLLLGTTITISSNHWAMAWTGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASALILFSSMTNAWhtgqwdL 80
Cdd:MTH00160 8 LLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML------N 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 81 TQLTHPTSCLILTAALAMKLGLAPFHFWFPEVLQGTSLATGLLLSTAMKLPPITLLfltSHSLDSTLLTTMAVLSAALGG 160
Cdd:MTH00160 82 LMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILL---SYLINNNFIIIIIILSAIIGA 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 161 WVGLNQTQIRKILAFSSIAHLGWMAIILSYSPKLTLLNFYLYSLVTAAVFLTLNTTKTLKLSTLMTSWTKTPALNTALLL 240
Cdd:MTH00160 159 IGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKIKFLLFL 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 241 TLLSLAGLPPLTGFLPKWFILQELTKQDMALSAVALSLLSLLSLFFYLRLAYCTTITLPPHTTSHMKQwrTNKPTNISIA 320
Cdd:MTH00160 239 NLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLKK--KKNKFSLILN 316
|
....*..
gi 1797022896 321 ILTTLSI 327
Cdd:MTH00160 317 FLSFISL 323
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
1-296 |
3.43e-47 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 161.98 E-value: 3.43e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 1 LIFTFSLLLGTTITISSNHWAMAWTGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASALILFSSMTNAWHTGQWDL 80
Cdd:MTH00144 7 LLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFS 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 81 TqlthptscLILTAALAMKLGLAPFHFWFPEVLQGTSLATGLLLSTAMKLPPITLL-FLTSHSLDSTLLTTMAVLSAALG 159
Cdd:MTH00144 87 M--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLsNFLDLYWLAYLLCVISVLSALVG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 160 GWVGLNQTQIRKILAFSSIAHLGWMAIILSYSPKLTLLNFYLYSLVTAAVFLTLNtTKTLKLSTLMTSWTKTPALNTALL 239
Cdd:MTH00144 159 SIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLW-SGDSGSMKDLGSLKPSYKTGLSII 237
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1797022896 240 LTLLSLAGLPPLTGFLPKWFILQELTKQDMALSAVALSLLSLLSLFFYLRLAYCTTI 296
Cdd:MTH00144 238 SLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFL 294
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
1-304 |
2.41e-45 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 157.25 E-value: 2.41e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 1 LIFTFSLLLGTTITISSNHWAMAWTGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASALILFSSmtnawhTGQWDL 80
Cdd:MTH00011 9 FLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------TMMWSF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 81 TQLTHPTSCLILTAALAMKLGLAPFHFWFPEVLQGTSLATGLLLSTAMKLPPITLLFLTSHSLDSTLLTTMAVLSAALGG 160
Cdd:MTH00011 83 PSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 161 WVGLNQTQIRKILAFSSIAHLGWMAIILSYSPKLTLLNFYLYSLVTAAVFLTLNTTKTLKLSTLMTSWTKTPALNTALLL 240
Cdd:MTH00011 163 LGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFI 242
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1797022896 241 TLLSLAGLPPLTGFLPKWFILQELTKQDMALSAVALSLLSLLSLFFYLRLAYcTTITLPPHTTS 304
Cdd:MTH00011 243 MLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIF-NFMYLSPTFSS 305
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
2-296 |
6.18e-41 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 145.59 E-value: 6.18e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 2 IFTFSLLLGTTITISSNHWAMAWTGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASALILFSSMTNAwhtgqwdLT 81
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSF-------SN 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 82 QLTHPTSCLILTAALAMKLGLAPFHFWFPEVLQGTSLATGLLLSTAMKLPPITLLFLTSHSLDstLLTTMAVLSAALGGW 161
Cdd:MTH00197 75 LYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSFM--GLLICSVLSSLIGGI 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 162 VGLNQTQIRKILAFSSIAHLGWMAIILSYSPKLTLLNFYLYSLVTAAVFLTLNTTKTLKLSTLMTSWTKTPALNTALLLT 241
Cdd:MTH00197 153 GGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLS 232
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1797022896 242 LLSLAGLPPLTGFLPKWFILQELTKQDMALSAVALSLLSLLSLFFYLRLAYCTTI 296
Cdd:MTH00197 233 FLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLI 287
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
17-262 |
1.12e-22 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 95.84 E-value: 1.12e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 17 SNHWAMAWTGLEINTLAVLPLI-SKSHHPRAIEAATKYFLVQAAASALILFSSMTNAWHTGQWDLTQL-----------T 84
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 85 HPTSCLILTAALAMKLGLAPFHFWFPEVLQGTSLATGLLL-STAMKLPPI-----TLLFLTSHSLDSTLLTTMAVLSAAL 158
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLaATLVKAGGYglirrSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 159 GGWVGLNQTQIRKILAFSSIAHLGWMAIILS----YSPKLTLLNFYLYSLVTAAVFL-----TLNTTKTLKLSTLMTSWT 229
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGagtiYGIQAAIFHLLTHGLFSAGLFLcagsvIYRRVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 1797022896 230 KTPALNTALLLTLLSLAGLPPLTGFLPKWFILQ 262
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
7-261 |
4.01e-22 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 95.48 E-value: 4.01e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 7 LLLGTTITISSNHWAMAWTGLEINTLAVLPLI-SKSHHPRAIEAATKYFLVQAAASALILFS-------------SMTNA 72
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 73 WHTGQWDLTQLTHPTSCLILTAALAMKLGLAPFHFWFPEVLQGTSLATGLLLSTAMKLPPITLLFltSHSLDSTLLTTMA 152
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILV--SIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 153 VLSAALGGWVGLNQTQIRKILAFSSIAHLGWMAIILSY----SPKLTLLNFYLY---SLVTAAVFLTLNTTKTL--KLST 223
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIgsfeSIQASLVYLFIYiimSICVFSIILALNVYKNLiiEFSG 239
|
250 260 270
....*....|....*....|....*....|....*...
gi 1797022896 224 LMTswtKTPALNTALLLTLLSLAGLPPLTGFLPKWFIL 261
Cdd:MTH00196 240 LSR---RLPILAITLALTFLSIAGIPPLVGFLGKWLIL 274
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
8-264 |
1.14e-21 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 95.18 E-value: 1.14e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 8 LLGTTITISSNHWAMAWTGLEINTLAVLPLIS-KSHHPRAIEAATKYFLVQAAASALILF-SSMTNAWhTGQWDLTQL-- 83
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYGA-TGSLNLAGIaa 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 84 ---THPTSCLILTAALAM-------KLGLAPFHFWFPEVLQGTSLATGLLLSTAMKL----PPITLLFLTSHSLDS---T 146
Cdd:COG1007 191 alaAGGANSPLLLLGLVLvlaglafKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIaafaALLRLLVEAFPGLAAdwqL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 147 LLTTMAVLSAALGGWVGLNQTQIRKILAFSSIAHLGWMAI-ILSYSPK-LTLLNFYL--YSLVTAAVFLTL-----NTTK 217
Cdd:COG1007 271 LLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLgLAAGTPLgVSAALFYLlaYLFMNLGAFAVIlllsrKGGE 350
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 1797022896 218 TLKLSTLMTSWTKTPALNTALLLTLLSLAGLPPLTGFLPKWFILQEL 264
Cdd:COG1007 351 AEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAA 397
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
7-261 |
1.43e-19 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 88.92 E-value: 1.43e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 7 LLLGTTITISSNHWAMAWTGLEINTLAVLPLIS-KSHHPRAIEAATKYFLVQAAASALILFSSMTNAWHTGQWDL----T 81
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 82 QLTHPTSCLILTAALAMKLGLAPFHFWFPEVLQGTSLATGLLLSTAMKLPPITLLFLTSHSLDSTLLTtmAVLSAALGGW 161
Cdd:MTH00199 186 ILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC--AVLSIIYGAI 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 162 VGLNQTQIRKILAFSSIAHLGW----MAIILSYSPKLTLLNFYLYSLVTAAVF---LTLNTTKTLKLSTLMTSwTKTPAL 234
Cdd:MTH00199 264 GALNQTKIKRLLAYSGIGHMGFilfgVAIGSFESIQASLIYMIIYVIMSICSFsiiLSLKLTKGLIVEVSGLS-RKNPVI 342
|
250 260
....*....|....*....|....*..
gi 1797022896 235 NTALLLTLLSLAGLPPLTGFLPKWFIL 261
Cdd:MTH00199 343 ALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
8-290 |
1.45e-19 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 89.11 E-value: 1.45e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 8 LLGTTITISSNHWAMAWTGLEINTLAVLPLIS-KSHHPRAIEAATKYFLVQAAASALIL--------------FSSMTNA 72
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLygmsllygatgslsFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 73 WHTGQWDLTQLThpTSCLILTAALAMKLGLAPFHFWFPEVLQGTSLATGLLLSTAMKLPPITLL-------FLTSHSLDS 145
Cdd:PRK05777 193 LADGSGNSLLLL--FGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLlrllvvaFGGLSEDWQ 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 146 TLLTTMAVLSAALGGWVGLNQTQIRKILAFSSIAHLGWM--AIILSYSPKLTLLNFYL--YSLVTAAVF--LTLNTTKTL 219
Cdd:PRK05777 271 QVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLlvGLAAGTAEGYSAVLFYLlaYLFMTLGAFgvISLLRRKGG 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1797022896 220 KLSTLmTSWT----KTPALNTALLLTLLSLAGLPPLTGFLPKWFILQELTKQDMALSAVALSLLSLLSLFFYLRL 290
Cdd:PRK05777 351 EAESI-SDFAglskRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
8-291 |
8.76e-19 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 86.93 E-value: 8.76e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 8 LLGTTITISSNHWAMAWTGLEINTLAVLPLIS-KSHHPRAIEAATKYFLVQAAASALILFSSMTNAWHTGQWDLTQLTHP 86
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 87 TSCLILT------------AALAMKLGLAPFHFWFPEVLQGTSLATGLLLSTAMKLP---PITLLFLTSHSLDST----L 147
Cdd:TIGR01770 192 LSNGMLNisllllgivlilVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAifaVFLRLFLYILFGFSEawqiF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 148 LTTMAVLSAALGGWVGLNQTQIRKILAFSSIAHLGWMAIILSYSPKLTLLN--FYL--YSLVTAAVFLTL------NTTK 217
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAvlFYIfiYALMSLGAFGVLsllrsyKDEW 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1797022896 218 TLKLSTLMTSWTKTPALNTALLLTLLSLAGLPPLTGFLPKWFILQELTKQDMALSAVALSLLSLLSLFFYLRLA 291
Cdd:TIGR01770 352 IEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
7-262 |
4.00e-16 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 78.65 E-value: 4.00e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 7 LLLGTTITISSNHWAMAWTGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASALILFSSMTNAWHTGQWDLTQLTH- 85
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAr 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 86 ---------PTSCLILTAALAMKLGLAPFHFWFPEVLQGTSLATGLLLSTAM-KLPP------ITLLFLTSHSLD-STLL 148
Cdd:COG0651 196 laeldpgllLAAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLtKVGVyailrvLTLLFGADPALFlGTLL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 149 TTMAVLSAALGGWVGLNQTQIRKILAFSSIAHLGWMAIILSYSPKLTLLNFYLY----SLVTAAVFLT----LNTTKTLK 220
Cdd:COG0651 276 LVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHllnhALAKALLFLAagaiERATGTRD 355
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 1797022896 221 LSTLMTSWTKTPALNTALLLTLLSLAGLPPLTGFLPKWFILQ 262
Cdd:COG0651 356 LDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQ 397
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
9-261 |
1.17e-15 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 77.59 E-value: 1.17e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 9 LGTTITISSNHWAMAWTGLEINTLAVLPLISKSHHPRAI---------EAATKYFLVQAAASALILFSSMTNAWHTGQWD 79
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNEG 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 80 -----LTQLTHPTSC---------LILTAALAMKLGLAPFHFWFPEVLQGTSLATGLLLSTAMKLppITLLFLTSHSLDS 145
Cdd:MTH00198 279 mlgtiLSATLETTNIelrqgslgyLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKF--TVYILLTSLVITS 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 146 TLLTTMAVLSAALGGWVGLNQTQIRKILAFSSIAHLGWMAIILSYSPKLTLLNFYLYS---LVTAAVFLTL--------- 213
Cdd:MTH00198 357 KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAvtyLVSALASFTVictleefgt 436
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1797022896 214 -------------NTTKTLKLSTLMTSWTKTPALNTALLLTLLSLAGLPPLTGFLPKWFIL 261
Cdd:MTH00198 437 rtptsrqrdgsfgNYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFIL 497
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
44-186 |
8.79e-12 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 65.84 E-value: 8.79e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 44 PRAIEAATKYFLVQAAASALILF-SSMTNAWHTGQWDLTQ-----LTHPTSCLILT-----AALAMKLGLAPFHFWFPEV 112
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGSTQLSAialalITSPSLGLALAlvfviAGIAFKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 113 LQGTSLATGLLLSTAMKLP----PITLLFLTSHSLDS---TLLTTMAVLSAALGGWVGLNQTQIRKILAFSSIAHLGWMA 185
Cdd:PRK02504 237 YEGSPTPVVAFLSVGSKAAgfalAIRLLVTAFPSFDEqwkLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFVM 316
|
.
gi 1797022896 186 I 186
Cdd:PRK02504 317 I 317
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
45-257 |
2.39e-11 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 64.64 E-value: 2.39e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 45 RAIEAATKYFLVQAAASALIL--FSSMTNAWHtGQWDL---------TQLTHPTSCLI----LTAALAMKLGLAPFHFWF 109
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVygFSWLYGLSG-GEIELqeivnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWT 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 110 PEVLQG-----------TSLATGLLLSTAMklppITLLFLTSHSLDSTLLTTMAVLSAALGGWVGLNQTQIRKILAFSSI 178
Cdd:CHL00049 238 PDVYEGsptpvvaflsvTSKVAASALATRI----FDIPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSI 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 179 AHLGWMAIIL-------SYSPKLTLLNFYLyslvtaavFLTLNTTKTLKLSTLMT----------SWTKTPALNTALLLT 241
Cdd:CHL00049 314 GQIGYVIIGIivgdsndGYASMITYMLFYI--------FMNLGTFACIVLFGLRTgtdnirdyagLYTKDPFLALSLALC 385
|
250
....*....|....*.
gi 1797022896 242 LLSLAGLPPLTGFLPK 257
Cdd:CHL00049 386 LLSLGGIPPLAGFFGK 401
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
43-186 |
6.72e-10 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 60.09 E-value: 6.72e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 43 HPRAIEAATKYFLVQAAASALILFSSMTNAWHTGQW--DLTQLTH-----PTSCLILTA---ALAMKLGLAPFHFWFPEV 112
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAaplplTAQLLLFLAffiAFAVKVPMFPFHTWLPDA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 113 LQGTSLATGLLLSTAMK-----------LPpitlLFLTSHSLDSTLLTTMAVLSAALGGWVGLNQTQIRKILAFSSIAHL 181
Cdd:COG1008 236 HVEAPTAGSVLLAGVLLkmggygllrfaLP----LFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHM 311
|
....*
gi 1797022896 182 GWMAI 186
Cdd:COG1008 312 GFVLL 316
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
3-213 |
1.30e-07 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 52.83 E-value: 1.30e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 3 FTFSLLLGT-TITISSNHWAMAWTGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAA------SALILFSSMTNAWHT 75
Cdd:PRK08676 106 LGFNLLLSViTFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGT 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 76 GQWDLTQLTHPTSCL---ILTAA-------LAMKLGLAPFHFWFPEV-LQGTSLATGLLLSTAMKLPPITLLFLTS---- 140
Cdd:PRK08676 186 GTLNWTELAAHASLLspsVLGASflfifigFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSAllrq 265
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1797022896 141 ---HSLDSTLLTTMAVLSAALGGWVGLNQTQIRKILAFSSIAHLGWMAIILSYSPKLTLLNFYLYSLVTAAVFLTL 213
Cdd:PRK08676 266 sgaAEQFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGL 341
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
27-260 |
2.77e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 52.02 E-value: 2.77e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 27 LEINTLAVLPLIS-KSHHPRAIEAATKYFLVQAAASALILFS---------SMTNAWHTGQWDLTQLTHPTSCL-ILTAA 95
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGiallygqygTLNMAYLAVKMSENPTVVAKIALaLFIAG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 96 LAMKLGLAPFHFWFPEVLQG--TSLATGLLLSTAMKLPPITLLFLTSHSLDSTLLTT------MAVLSAALGGWVGLNQT 167
Cdd:PRK08376 230 LAMKSGAVPVHMWLPDAYPAapSSISAMLLVIKQAGLYALARVLFSIYGPAINLATVgwviiiLGCLTMFVGVAMAVVQK 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 168 QIRKILAFSSIAHLGWM------AIILSYSPKLT-------------LLNFYLY----SLVTAAVFLTLNTTKTLKLSTL 224
Cdd:PRK08376 310 DVKRLLAYHSVSQIGYMllglgvGLAALGDPAMAsygeialaggiyhIVNHALYkallFLTAGAVIYETGTRNLNELGGL 389
|
250 260 270
....*....|....*....|....*....|....*.
gi 1797022896 225 MtswTKTPALNTALLLTLLSLAGLPPLTGFLPKWFI 260
Cdd:PRK08376 390 A---RTMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
27-264 |
8.97e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 50.26 E-value: 8.97e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 27 LEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASALILFS-SMTNAwHTGQWDLTQLTH--PTSCLILTA------ALA 97
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGvGLLYG-VTGTLNMADLAGalAENPTVVTAfgfvllALA 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 98 MKLGLAPFHFWFPEVLQGTSLATGLLLS-TAMKLP--PITLLFLT-------SHSLDSTLLTTMAVLSAALGGWVGLNQT 167
Cdd:PRK08375 214 LKAAVFPLHTWLPRAYPAAPPVVTALLSgLVTKVAvyALIRIYFTvfggdfrFALGLGWLLAVLALLSMLVGSLAALGQD 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 168 QIRKILAFSSIAHLGWMAIILSYSPKLTLLNFYLYS-----------LVTAAVFLTLNTTKTLKLSTLMTswtKTPALNT 236
Cdd:PRK08375 294 DVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLlhhalmkgalfLAAGAIEVTYGTRRLSELSGLGR---RMPLTAA 370
|
250 260
....*....|....*....|....*...
gi 1797022896 237 ALLLTLLSLAGLPPLTGFLPKWFILQEL 264
Cdd:PRK08375 371 AFAVASLSLIGVPPTSGFVSKWYLVVGA 398
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
44-186 |
1.38e-06 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 49.55 E-value: 1.38e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 44 PRAIEAATKYFLVQAAASALILFSSMTNAWHTGQW----DLTQLTHPTSC-----LILTAALAMKLGLAPFHFWFPEV-L 113
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTfdllELLNLPLPFGVqtwlfLAFFIAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1797022896 114 QGTSLATGLLLSTAMKLPPITL------LFLTSHSLDSTLLTTMAVLSAALGGWVGLNQTQIRKILAFSSIAHLGWMAI 186
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTYGFlrfnlpLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLL 310
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
49-197 |
2.83e-06 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 48.93 E-value: 2.83e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 49 AATKYFLVQAAASALILFSSMTNAWHTGQWDL---TQLTH----PTSCLILTA---ALAMKLGLAPFHFWFPEVLQGTSL 118
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGASSFdyePLRSHtlplSTQLLLLAPilvGFGIKIPLVPFHTWLPDAHVEAST 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 119 ATGLLLS-TAMKLPPITLL------FLTSHSLDSTLLTTMAVLSAALGGWVGLNQTQIRKILAFSSIAHLGWMAIILSYS 191
Cdd:PRK06473 238 PVSVLLAgVLLKLGTYGLLrfgvglFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAA 317
|
....*.
gi 1797022896 192 PKLTLL 197
Cdd:PRK06473 318 TPLSIL 323
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
28-269 |
3.14e-06 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 48.84 E-value: 3.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 28 EINTLAVLPLISKSHHpRAIEAATKYFLVQAAASALILFSSMTNAWHTGQWD-------LTQLTHPTSCLI----LTAAL 96
Cdd:PRK08668 128 EIMTFSSFMMVPMGKK-ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDfadisqgLINDTSTGFALIvflfLLAFG 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 97 AMKLGLAPFHFWFPEVLQGTSLATGLLLSTA------------MKLPPITLLFLT-----SHSLDSTLLTTMAVLSAALG 159
Cdd:PRK08668 207 VAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQlsklgaygfllvLYVLPGTKLFSEfgtyrGVPLFNYILAWLGNISIIVG 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 160 GWVGLNQTQIRKILAFSSIAHLGWMAIIL----SYSPKLTLLNFYLYSLVTAAVFLTLNT----TKTLKLSTLMTSWTKT 231
Cdd:PRK08668 287 TLMAILQEDIKKLIAYSSVANGGYILVGLglgtSLGFAGGLFHVFNHALFKGLFFLIFAAviyrTGTTKISEMGGLIEKM 366
|
250 260 270
....*....|....*....|....*....|....*...
gi 1797022896 232 PALNTALLLTLLSLAGLPPLTGFLPKWFILQELTKQDM 269
Cdd:PRK08668 367 PFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGM 404
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
2-186 |
8.28e-06 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 47.23 E-value: 8.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 2 IFTFSLLLgttiTISSNHWAMAWTGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASALILFSS----------MTN 71
Cdd:PRK06458 116 LFLFTMLL----ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTilvyanaatvMGD 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 72 AWHTGQW-DLTQLTHPTSCLILTAALAM-------KLGLAPFHFWFP----EVLQGTS-LATGLLLSTAMkLPPITLLFL 138
Cdd:PRK06458 192 GEMAILWtELLKHASLLDPTLMKLAFVFlligfgtKVGLFPMHAWLPdahsEAPSPVSaLLSGVLLNVAL-YAVLRYYIL 270
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1797022896 139 TSHSLDS----TLLTTMAVLSAALGGWVGLNQTQIRKILAFSSIAHLGWMAI 186
Cdd:PRK06458 271 IDAAIGSdfpgRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAF 322
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
44-211 |
9.51e-06 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 47.12 E-value: 9.51e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 44 PRAIEAATKYFLVQAAASALILFSSMTNAWH----TGQWDLTQLTH---PTSCLILT-----AALAMKLGLAPFHFWFPE 111
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADLLNlplPPGVQYWLflaffIAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 112 VLQ-----GTSLATGLLLSTA------MKLPpitLLFLTSHSLdSTLLTTMAVLSAALGGWVGLNQTQIRKILAFSSIAH 180
Cdd:PRK05846 237 AHVqaptaGSVLLAGILLKMGaygllrFSLP---LFPDASHEF-APIIITLGVIAIIYGALVALAQTDIKKLIAYSSISH 312
|
170 180 190
....*....|....*....|....*....|....*
gi 1797022896 181 LGW--MAIILSYSPKLTLLNFYLYS--LVTAAVFL 211
Cdd:PRK05846 313 MGFvtLGIFAGNQLGIQGAIFQMIShgLSSAALFL 347
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
285-328 |
1.18e-05 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 42.24 E-value: 1.18e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 1797022896 285 FFYLRLAYCTTITLPPHTTSHMKQWRTNKPTNI-SIAILTTLSIT 328
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTlLLPTLTTLSIL 45
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
1-188 |
1.22e-05 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 46.68 E-value: 1.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 1 LIFTFSLLLgttITISSNHWAMaWTGLEINTLAVLPLISKSHH-PRAIEAATKYFLVQAAASALILFSSMTNAWHTGQWD 79
Cdd:COG1009 118 LLFMAAMLG---LVLSDNLLLL-FVFWELVGLCSYLLIGFWYEkPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLN 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 80 LTQL-----THPTSCLILTAALAM------KLGLAPFHFWFPEVLQGTSLATGLLLSTAM---------KLPPItlLFLT 139
Cdd:COG1009 194 FSELlaaapTILSSPLLTLILLLLllgafgKSAQFPLHFWLPDAMEGPTPVSALLHAATMvkagvyllaRLSPL--FALS 271
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1797022896 140 SHSLdsTLLTTMAVLSAALGGWVGLNQTQIRKILAFSSIAHLGWMAIIL 188
Cdd:COG1009 272 PVWL--TVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLAL 318
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
23-257 |
1.76e-05 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 46.57 E-value: 1.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 23 AWtglEINTLAVLPLISKSHhPRAIEAATKYFLVQAAASALILFSSMTNAWHTGQWDLTQLTHPTSCL---ILTAALAMK 99
Cdd:PRK12650 138 AW---ELVSLASFFLIARSG-SGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVWAekpGLTTVVAVL 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 100 LGLA--------PFHFWFPEVLQGTSLATGLLLSTAMKLPPITLLFLTSHSLDST-----LLTTMAVLSAALGGWVGLNQ 166
Cdd:PRK12650 214 IAVAaftksaqfPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVavwnwLLIIVGMITALMGAVFAVQK 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 167 TQIRKILAFSSIAHLGWM-AIILSYSP-KLT--LLNFYLYSLVTAAVFLTL----NTTKTLKLSTLMTSWTKTPALNTAL 238
Cdd:PRK12650 294 TDLKKLTAYSTVSQLGWIvATIGVGTPfALTaaVVHTLAHALFKSSLFMLIgvvdHQAGTRDIRRLGSLWRRMPFTFVSV 373
|
250
....*....|....*....
gi 1797022896 239 LLTLLSLAGLPPLTGFLPK 257
Cdd:PRK12650 374 TIAALSMAAVPPLFGFVSK 392
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
27-261 |
7.19e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 44.34 E-value: 7.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 27 LEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASALILFS-----SMTNAWHTGqwDLTQLTHP--------TSCLILT 93
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGigflyAITGTLNMG--DMFLIIQDlptnraiqIGVLFIM 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 94 AALAMKLGLAPFHFWFPEVLQGTSLATGLLLSTAMKLPPITL------------LFLTSHSLDSTLLTtMAVLSAALGGW 161
Cdd:PRK12662 217 VGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLiirivydvfkanFVFTTLPFNNVFMI-LAALAIVFGSV 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 162 VGLNQTQIRKILAFSSIAHLGWMAIILSYSPKLTLLNFYLY----SLVTAAVFLTLNTTK----TLKLSTLMTSWTKTPA 233
Cdd:PRK12662 296 LAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYivnhSIVKSALFMVSGSISyhfgTTKLEDCLNLWKSMPK 375
|
250 260
....*....|....*....|....*...
gi 1797022896 234 LNTALLLTLLSLAGLPPLTGFLPKWFIL 261
Cdd:PRK12662 376 ITLAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
49-262 |
8.18e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 44.32 E-value: 8.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 49 AATKYFLVQAAASALILFSSMTNAWHTGQWD-------LTQLTHPTSCLILTAAL---AMKLGLAPFHFWFPEVLQGTSL 118
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSfdydaisTQNLSLNTQLILLTGLLlgfGIKIPLVPLHTWLPDAYTEASP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 119 ATGLLLSTAM-KLPPITL------LFLTSHSLDSTLLTTMAVLSAALGGWVGLNQTQIRKILAFSSIAHLGWMAIILSYS 191
Cdd:PRK07363 238 AVAILLGGVLaKLGTYGLlrfglqLFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAG 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 192 PKLTLLN---------------FYLYSLVTAAVfltlNTTKTLKLSTLMTSWTKTPALNTALLLTLLSLAGLPPLTGFLP 256
Cdd:PRK07363 318 TQLSLLGavaqmishglilallFHLVGIVERKV----GTRDLDVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGFVA 393
|
....*.
gi 1797022896 257 KWFILQ 262
Cdd:PRK07363 394 EFIVFQ 399
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
22-186 |
2.65e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 42.71 E-value: 2.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 22 MAWtglEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASALILFSSMTNAWHTGQ--WDLTQLTH---PTSCLILT--- 93
Cdd:PRK12561 114 LMW---ELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLALALSGDTftFDLAELGAksyPLALELLLyag 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 94 --AALAMKLGLAPFHFWFPE-----------VLQGTSLATG--LLLSTAMKLPPitllflTSHSLDSTLLTTMAVLSAAL 158
Cdd:PRK12561 191 flIAFGVKLPIFPLHTWLPDahgeasapvsmILAGVLLKMGgyALIRFNVQMLP------DAHVYFAPALAILGVVNIIY 264
|
170 180
....*....|....*....|....*...
gi 1797022896 159 GGWVGLNQTQIRKILAFSSIAHLGWMAI 186
Cdd:PRK12561 265 GALNAFAQDNVKRRLAYSSVSHMGFVLL 292
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
104-261 |
7.75e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 41.44 E-value: 7.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 104 PFHFWFPEVLQGTSLATGLLLSTAMKLPPITLLFLTSHSLDST-----LLTTMAVLSAALGGWVGLNQTQIRKILAFSSI 178
Cdd:PRK12647 213 PFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTplwqtILPLFGGLTMLTGALLAVRQTDLKLILAYSTV 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 179 AHLGWMAIILSYSPKLTLLNFYLY----SLVTAAVFLTLNT----TKTLKLSTLMTSWTKTPALNTALLLTLLSLAGLPP 250
Cdd:PRK12647 293 SALGTLVMLLGLGSELAIKAAVLFlvahSLYKGALFMVAGIidheTGTRDITKLGGLRRAMPITAAAALLAALSMAGLPP 372
|
170
....*....|.
gi 1797022896 251 LTGFLPKWFIL 261
Cdd:PRK12647 373 LFGFLAKELIY 383
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
99-265 |
1.22e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 40.71 E-value: 1.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 99 KLGLapfHFWFPEVLQGTSLATGLLLSTAMKLPPITLL-----FLTSHSLDSTLLTTMAVLSAALGGWVGLNQTQIRKIL 173
Cdd:MTH00032 241 QLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMirsfpLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVI 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 174 AFSSIAHLGWMAIILSY--SPKLTLLNFYLYSLVTAAVFL---------TLNTTKTLKLSTLMTSwtkTPALNTALLLTL 242
Cdd:MTH00032 318 AYSTCSQLGYMVLIIGIegSHNVGLFHLVNHAFFKALLFLsagsvihstTVDEQDMRKMGGLIHS---IPFTYTMMLIGS 394
|
170 180
....*....|....*....|...
gi 1797022896 243 LSLAGLPPLTGFLPKWFILqELT 265
Cdd:MTH00032 395 FSIMGLPYLTGFYSKDLIL-ELT 416
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
42-257 |
1.45e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 40.58 E-value: 1.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 42 HHPRAIEAATKYFLVQAAASALILFSSMTNAWHTGQWDLTQLTHPTS---------------CLILTAAlAMKLGLAPFH 106
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSElienikghplflitlILIFIGA-AAKSAQGPFY 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 107 FWFPEVLQGTSLATGLLLSTAMKLPPITLLFLTSHSLDST-----LLTTMAVLSAALGGWVGLNQTQIRKILAFSSIAHL 181
Cdd:PRK12649 235 IWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQL 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 182 GWMAIILSYS-----------PKLTLLNFYLYS----LVTAAVFLTLNTTKTLKLSTLMTswtKTPALNTALLLTLLSLA 246
Cdd:PRK12649 315 AYLMTMYGYTtyhepglgvaaATFHLLNHATFKaclfLVAGIVAHEAATRDIRKLGGLRK---EMPITFIVASIAALAMA 391
|
250
....*....|.
gi 1797022896 247 GLPPLTGFLPK 257
Cdd:PRK12649 392 GIPPLNGFLSK 402
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
90-257 |
1.67e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 40.29 E-value: 1.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 90 LILTAALAmKLGLAPFHFWFPEVLQGTSLATGLLLSTAMKLPPITLL------FLTSHSLDSTLLTtMAVLSAALGGWVG 163
Cdd:PRK12644 208 LILVGALS-KSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVarlapgFADVPVWRPTVLV-LGLATMLLGGWRA 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 164 LNQTQIRKILAFSSIAHLGWMAIILSYSPK------LTLLnfYLYSLVTAAVFLTL----NTTKTLKLSTLMTSWTKTPA 233
Cdd:PRK12644 286 LRQHDLKLILAYGTVSQLGFLTVLVGIGTRdaalagLAML--LAHALFKAALFLVVgiidHSTGTRDIRKLSGLGRRQPV 363
|
170 180
....*....|....*....|....
gi 1797022896 234 LNTALLLTLLSLAGLPPLTGFLPK 257
Cdd:PRK12644 364 LAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
27-191 |
2.86e-03 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 39.19 E-value: 2.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 27 LEINTLAVLPLISKSHHPRAIEAATKYFLVQAAAS------ALILFSsmtnawHTGQWDLT---QLTHPTSCL----ILT 93
Cdd:PRK06525 142 FEITGLCSWALISYYQSPKALRSALKALLITHIGSlglylaAATLFL------QTGTFALSalsGLHGSLKYLvflgILF 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 94 AALAMKLGLaPFHFWFPEVLQGTSLATGLLLSTAMKLPPITLLFLTSHSLDS------TLLTTMAVLSAALGGWVGLNQT 167
Cdd:PRK06525 216 AAWGKSAQL-PFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPiphvigYVGAVMAIVTLLYGFLMYLPQQ 294
|
170 180
....*....|....*....|....
gi 1797022896 168 QIRKILAFSSIAHLGWMAIILSYS 191
Cdd:PRK06525 295 DMKRLLAYSTITQLGYMFFGLSLA 318
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
89-191 |
4.51e-03 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 38.90 E-value: 4.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 89 CLILTAALAMKLGLAPFHFWFPEVLQGTSLATGLLLSTAMKLPPITLLFLTSHSLDSTLLTTMAV-----LSAALGGWVG 163
Cdd:MTH00020 213 CLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVtivgsLTVFFAATVG 292
|
90 100
....*....|....*....|....*...
gi 1797022896 164 LNQTQIRKILAFSSIAHLGWMAIILSYS 191
Cdd:MTH00020 293 LVQNDLKKVIAYSTCSQLGYMVVACGLS 320
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
7-184 |
4.87e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 38.53 E-value: 4.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 7 LLLGTTITISSNHWAM---AW--TGLEINTLavlpLISKSHHPRAIEAATKYFLVQAAASALILFSSMTNAWHTGQWDLT 81
Cdd:PRK08168 109 VLAAVHLLVLSDHLLVliaAWaaISLALHRL----LCFYPDRPFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLS 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 82 QL-----THPTS------CLILTAALAMKLGLAPFHFWFPEVLQGTSLATGLLLSTAMKLPPITLL----FLTSHSLDST 146
Cdd:PRK08168 185 ALwahlaAQGASpslqaaALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVVNLGGFVLIrfapLLEQAPPARW 264
|
170 180 190
....*....|....*....|....*....|....*...
gi 1797022896 147 LLTTMAVLSAALGGWVGLNQTQIRKILAFSSIAHLGWM 184
Cdd:PRK08168 265 LLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFM 302
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
49-222 |
5.17e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 38.53 E-value: 5.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 49 AATKYFLVQAAASALILFSSMTNAWHTG--QWDLTQLTH----PTSCLILTAAL----AMKLGLAPFHFWFPEVL-QGTS 117
Cdd:PRK02546 166 AATKFILYTAGSSLFILLAALAMAFYGDtpTFDMTALAAkdfgLGFQLLCYAGLliayGVKLPIVPLHTWLPDAHgEATA 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 118 LATGLLLSTAMKLPPITLL------FLTSHSLDSTLLTTMAVLSAALGGWVGLNQTQIRKILAFSSIAHLGWMAI-ILSY 190
Cdd:PRK02546 246 PVHMLLAGILLKMGGYALLrmnagmLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIgIGSF 325
|
170 180 190
....*....|....*....|....*....|....*....
gi 1797022896 191 SPKLT---LLNFYLYSLVTAAVFL----TLNTTKTLKLS 222
Cdd:PRK02546 326 TDLGTsgaMLQMISHGLIGASLFFlvgaTYDRTHTLMLD 364
|
|
| PHA03140 |
PHA03140 |
helicase-primase primase subunit; Provisional |
41-126 |
7.00e-03 |
|
helicase-primase primase subunit; Provisional
Pssm-ID: 222998 Cd Length: 772 Bit Score: 38.38 E-value: 7.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1797022896 41 SHHPRAIEAATKYFLVQAAASAlilfssmtnAWHTgqWDLTQLTHPTS--CLILTAALAMKLGLAPFHFWFPEVLQgTSL 118
Cdd:PHA03140 68 SRHAGDVTAATLASLCRAASSA---------APDA--WPLEPLGNADTwrCLYGSALATLRRRLGFFSFYSPVRFG-TDT 135
|
....*...
gi 1797022896 119 ATGLLLST 126
Cdd:PHA03140 136 ATGLLVKA 143
|
|
|