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Conserved domains on  [gi|1736209022|gb|QEO12456|]
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NADH dehydrogenase subunit 5 (mitochondrion) [Bos taurus]

Protein Classification

NADH dehydrogenase subunit 5( domain architecture ID 11475900)

NADH dehydrogenase subunit 5 (ND5/NADH5) is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain; the immediate electron acceptor for the enzyme is believed to be ubiquinone

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ND5 MTH00108
NADH dehydrogenase subunit 5; Provisional
1-602 0e+00

NADH dehydrogenase subunit 5; Provisional


:

Pssm-ID: 177170 [Multi-domain]  Cd Length: 602  Bit Score: 1185.03  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022   1 MNMFSSLSLVTLLLLTMPIMMMSLNTYKPSNYPLYVKTAISYAFITSMIPTMMFIHSGQELIISNWHWLTIQTLKLSLSF 80
Cdd:MTH00108    1 MNLFTSSTLLTLLILTLPIIMTLTNPYKTNNYPLYVKTTISYAFIISLIPTMMFIHSGQEMIISNWHWMTIQTLKLSLSF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  81 KMDYFSMMFTPVALFVTWSIMEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
Cdd:MTH00108   81 KLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 161 RADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPSDSNMPLIGLALAATGKSAQFGLHPWLPSAMEGP 240
Cdd:MTH00108  161 RTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGP 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 241 TPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGIN 320
Cdd:MTH00108  241 TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGIN 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 321 QPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAAN 400
Cdd:MTH00108  321 QPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAAN 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 401 TSYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFPTLVSINENNPLLINSIKRLLIGSLFAGYIISNNIPPTTIPQM 480
Cdd:MTH00108  401 TSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTTIPQM 480
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 481 TMPYYLKTTALIVTILGFILALEISNMTKNLKYHYPSNAFKFSTLLGYFPTIMHRLAPYMNLSMSQKSASSLLDLIWLEA 560
Cdd:MTH00108  481 TMPLYLKLTALAVTILGFILALELNLLTNNLKFKYPSNTFKFSNMLGYFPTIMHRLPPYMNLTMSQKLASMLLDLIWLEK 560
                         570       580       590       600
                  ....*....|....*....|....*....|....*....|..
gi 1736209022 561 ILPKTISLAQMKASTLVTNQKGLIKLYFLSFLITILISMMLF 602
Cdd:MTH00108  561 ILPKTISLIQMKASTTISNQKGLIKLYFLSFLITLTLSLLLF 602
 
Name Accession Description Interval E-value
ND5 MTH00108
NADH dehydrogenase subunit 5; Provisional
1-602 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177170 [Multi-domain]  Cd Length: 602  Bit Score: 1185.03  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022   1 MNMFSSLSLVTLLLLTMPIMMMSLNTYKPSNYPLYVKTAISYAFITSMIPTMMFIHSGQELIISNWHWLTIQTLKLSLSF 80
Cdd:MTH00108    1 MNLFTSSTLLTLLILTLPIIMTLTNPYKTNNYPLYVKTTISYAFIISLIPTMMFIHSGQEMIISNWHWMTIQTLKLSLSF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  81 KMDYFSMMFTPVALFVTWSIMEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
Cdd:MTH00108   81 KLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 161 RADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPSDSNMPLIGLALAATGKSAQFGLHPWLPSAMEGP 240
Cdd:MTH00108  161 RTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGP 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 241 TPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGIN 320
Cdd:MTH00108  241 TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGIN 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 321 QPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAAN 400
Cdd:MTH00108  321 QPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAAN 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 401 TSYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFPTLVSINENNPLLINSIKRLLIGSLFAGYIISNNIPPTTIPQM 480
Cdd:MTH00108  401 TSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTTIPQM 480
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 481 TMPYYLKTTALIVTILGFILALEISNMTKNLKYHYPSNAFKFSTLLGYFPTIMHRLAPYMNLSMSQKSASSLLDLIWLEA 560
Cdd:MTH00108  481 TMPLYLKLTALAVTILGFILALELNLLTNNLKFKYPSNTFKFSNMLGYFPTIMHRLPPYMNLTMSQKLASMLLDLIWLEK 560
                         570       580       590       600
                  ....*....|....*....|....*....|....*....|..
gi 1736209022 561 ILPKTISLAQMKASTLVTNQKGLIKLYFLSFLITILISMMLF 602
Cdd:MTH00108  561 ILPKTISLIQMKASTTISNQKGLIKLYFLSFLITLTLSLLLF 602
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
43-601 2.42e-148

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 441.51  E-value: 2.42e-148
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  43 AFITSMIPTMMFIHS--------GQELIISNWHWLTIQTLKLSLSFKMDYFSMMFTPVALFVTWSIMEFSMWYMHSDPNI 114
Cdd:COG1009    31 GWLAALAPLAAFVLSlllfpavlGGEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGL 110
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 115 NKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLN 194
Cdd:COG1009   111 ARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAG 190
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 195 TWDLQQIFMLNPSDSNMPLIGLA-----LAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTEN 269
Cdd:COG1009   191 TLNFSELLAAAPTILSSPLLTLIlllllLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFAL 270
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 270 NKFIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHS 349
Cdd:COG1009   271 SPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHA 350
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 350 LNdEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATSF-TAIYSTRIIF 428
Cdd:COG1009   351 TG-TRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLGAFlTAFYSFRLFF 429
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 429 FALLGQPRFPTLVSINENNPLLINSIKRLLIGSLFAGYIISNN----IPPTTIPQMTM----PYYLKTTALIVTILGFIL 500
Cdd:COG1009   430 LVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLleglLAPAAVLGGELhlahGLLLNALPLLLSLLGIAL 509
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 501 AL------EISNMTKNLKYHYPSNAFKFstllgYFPTIMHRLAPYMNLSMSQksaSSLLDLIWLEAILPKTISLAQMKAS 574
Cdd:COG1009   510 GYllylkrPLPALAERLKPLYRLLANKW-----YFDELYDALFVKPVRALAR---FLWFDRYVIDGIVNGLARLTLFSGR 581
                         570       580
                  ....*....|....*....|....*..
gi 1736209022 575 TLVTNQKGLIKLYFLSFLITILISMML 601
Cdd:COG1009   582 LLRRLQTGYLQFYALTILLGVVVLLLL 608
NDH_I_L TIGR01974
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ...
39-501 2.01e-131

proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]


Pssm-ID: 273905 [Multi-domain]  Cd Length: 609  Bit Score: 398.19  E-value: 2.01e-131
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  39 AISYAFITSMIPTMMFIHSGQELIISN--WHWLTIQTLKLSLSFKMDYFSMMFTPVALFVTWSIMEFSMWYMHSDPNINK 116
Cdd:TIGR01974  36 SVGLSAALSAFVFVDFFLNGEGEAFTQslFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSR 115
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 117 FFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTW 196
Cdd:TIGR01974 116 FFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTL 195
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 197 DLQQIFMLNPSDSN--MPLIGLAL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKF 272
Cdd:TIGR01974 196 NFQEVFALAPGAFFsaLTLICLLLfiGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPT 275
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 273 IQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLND 352
Cdd:TIGR01974 276 ALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHH 355
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 353 EQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATSFTAIYSTRIIFFALL 432
Cdd:TIGR01974 356 EQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFH 435
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1736209022 433 GQPRFPTLVSINENNPLLINSIKRLLIGSLFAGYIISNNIPP--TTIPQMT--------MPYYLKTTALIVTILGFILA 501
Cdd:TIGR01974 436 GKERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEFlkGVLPTSAepalehhhVPALEIWSPTAVAILGILLA 514
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
134-399 1.97e-55

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 189.45  E-value: 1.97e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 134 ANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDLQQI-----FMLNPSD 208
Cdd:pfam00361   1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltGGLNSSG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 209 SNMPLIGLALAATGKSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRFYPLTEN-NKFIQSITLCLGAITTL 286
Cdd:pfam00361  81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPsSPFIQQILLILAIISML 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 287 FTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPY---LAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLF 363
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 1736209022 364 KAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAA 399
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAA 275
 
Name Accession Description Interval E-value
ND5 MTH00108
NADH dehydrogenase subunit 5; Provisional
1-602 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177170 [Multi-domain]  Cd Length: 602  Bit Score: 1185.03  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022   1 MNMFSSLSLVTLLLLTMPIMMMSLNTYKPSNYPLYVKTAISYAFITSMIPTMMFIHSGQELIISNWHWLTIQTLKLSLSF 80
Cdd:MTH00108    1 MNLFTSSTLLTLLILTLPIIMTLTNPYKTNNYPLYVKTTISYAFIISLIPTMMFIHSGQEMIISNWHWMTIQTLKLSLSF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  81 KMDYFSMMFTPVALFVTWSIMEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
Cdd:MTH00108   81 KLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 161 RADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPSDSNMPLIGLALAATGKSAQFGLHPWLPSAMEGP 240
Cdd:MTH00108  161 RTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGP 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 241 TPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGIN 320
Cdd:MTH00108  241 TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGIN 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 321 QPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAAN 400
Cdd:MTH00108  321 QPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAAN 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 401 TSYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFPTLVSINENNPLLINSIKRLLIGSLFAGYIISNNIPPTTIPQM 480
Cdd:MTH00108  401 TSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTTIPQM 480
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 481 TMPYYLKTTALIVTILGFILALEISNMTKNLKYHYPSNAFKFSTLLGYFPTIMHRLAPYMNLSMSQKSASSLLDLIWLEA 560
Cdd:MTH00108  481 TMPLYLKLTALAVTILGFILALELNLLTNNLKFKYPSNTFKFSNMLGYFPTIMHRLPPYMNLTMSQKLASMLLDLIWLEK 560
                         570       580       590       600
                  ....*....|....*....|....*....|....*....|..
gi 1736209022 561 ILPKTISLAQMKASTLVTNQKGLIKLYFLSFLITILISMMLF 602
Cdd:MTH00108  561 ILPKTISLIQMKASTTISNQKGLIKLYFLSFLITLTLSLLLF 602
ND5 MTH00137
NADH dehydrogenase subunit 5; Provisional
18-604 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214428 [Multi-domain]  Cd Length: 611  Bit Score: 956.98  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  18 PIMM-MSLNTYKPSNYPLYVKTAISYAFITSMIPTMMFIHSGQELIISNWHWLTIQTLKLSLSFKMDYFSMMFTPVALFV 96
Cdd:MTH00137   21 PLLTtLSPNPQKPNWALTHVKTAVKTAFFVSLLPLFLFLNQGAETIITNWNWMNTLTFDINISFKFDHYSIIFTPIALYV 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  97 TWSIMEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNR 176
Cdd:MTH00137  101 TWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNR 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 177 IGDIGFILAMAWFLTNLNTWDLQQIFMLNPS-DSNMPLIGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVA 255
Cdd:MTH00137  181 VGDIGLILAMAWMATNLNSWEIQQIFALSKDfDLTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVA 260
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 256 GIFLLIRFYPLTENNKFIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFF 335
Cdd:MTH00137  261 GIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFF 340
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 336 KAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIA 415
Cdd:MTH00137  341 KAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIA 420
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 416 TSFTAIYSTRIIFFALLGQPRFPTLVSINENNPLLINSIKRLLIGSLFAGYIISNNIPPTTIPQMTMPYYLKTTALIVTI 495
Cdd:MTH00137  421 TSFTAVYSLRVVFFVSMGHPRFNPLSPINENNPAVINPIKRLAWGSIIAGLLITSNILPLKTPVMTMPPLLKLAALIVTI 500
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 496 LGFILALEISNMT-KNLKYHYPSNAFKFSTLLGYFPTIMHRLAPYMNLSMSQKSASSLLDLIWLEAILPKTISLAQMKAS 574
Cdd:MTH00137  501 LGLLIALELASLTnKQFKPTPTLPPHHFSNMLGFFPAIIHRLTPKLNLTLGQTIATQMVDQTWLEKTGPKGIASLQLPLI 580
                         570       580       590
                  ....*....|....*....|....*....|.
gi 1736209022 575 TLVTN-QKGLIKLYFLSFLITILISMMLFNF 604
Cdd:MTH00137  581 TTTSNiQQGMIKTYLTLFLLTLALATLLLLL 611
ND5 MTH00004
NADH dehydrogenase subunit 5; Validated
20-602 0e+00

NADH dehydrogenase subunit 5; Validated


Pssm-ID: 214398 [Multi-domain]  Cd Length: 602  Bit Score: 896.45  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  20 MMMSLNTYKPSNYPLYVKTAISYAFITSMIPTMMFIHSGQELIISNWHWLTIQTLKLSLSFKMDYFSMMFTPVALFVTWS 99
Cdd:MTH00004   20 ILLPLLSKNLKNSPTTIKTTVKLAFLISLIPLTLFLNSGTESITTNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWS 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 100 IMEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGD 179
Cdd:MTH00004  100 ILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGD 179
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 180 IGFILAMAWFLTNLNTWDLQQIFMLNPSDSnMPLIGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFL 259
Cdd:MTH00004  180 IGLILSMAWLAMTLNTWEIQQLFSPTQTPT-LPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFL 258
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 260 LIRFYPLTENNKFIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAML 339
Cdd:MTH00004  259 LIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAML 338
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 340 FMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATSFT 419
Cdd:MTH00004  339 FLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFT 418
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 420 AIYSTRIIFFALLGQPRFPTLVSINENNPLLINSIKRLLIGSLFAGYIISNNIPPTTIPQMTMPYYLKTTALIVTILGFI 499
Cdd:MTH00004  419 AAYSLRMILLVQTGFPRTPPTTPINENTPTIINPITRLALGSILAGLLISSTILPTKTPPMTMPTTTKLAALIVTILGIL 498
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 500 LALEISNMTKNLKYHYPSNAFKFSTLLGYFPTIMHRLAPYMNLSMSQKSASSLLDLIWLEAILPKTISLAQMKASTLVTN 579
Cdd:MTH00004  499 LALELSNMTTTLTPPKQNTLHNFSNQLAFFNPLTHRLLPMTLLKSSQKIATHLIDLSWLEKMGPKGLANLQLTASKTLTT 578
                         570       580
                  ....*....|....*....|....
gi 1736209022 580 -QKGLIKLYFLSFLITILISMMLF 602
Cdd:MTH00004  579 lQKGLIKNYLTSFALTILLLLLLT 602
ND5 MTH00066
NADH dehydrogenase subunit 5; Provisional
19-602 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214416 [Multi-domain]  Cd Length: 598  Bit Score: 853.05  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  19 IMMMSLNTYKPSNYPLYVKTAISYAFITSMIPTMMFIHSGQELIISNWHWLTIQTLKLSLSFKMDYFSMMFTPVALFVTW 98
Cdd:MTH00066   17 LLILPLLLPKSNNFHTNVKTSVKTAFFISLIPLMIFINQGLESITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTW 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  99 SIMEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIG 178
Cdd:MTH00066   97 SILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVG 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 179 DIGFILAMAWFLTNLNTWDLQQIFMLNPSDSnMPLIGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIF 258
Cdd:MTH00066  177 DIGLILSMAWLAMNTNSWELQQIFLLNDNST-LPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIF 255
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 259 LLIRFYPLTENNKFIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAM 338
Cdd:MTH00066  256 LLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAM 335
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 339 LFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATSF 418
Cdd:MTH00066  336 LFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSF 415
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 419 TAIYSTRIIFFALLGQPRFPTLVSINENNPLLINSIKRLLIGSLFAGYIISNNIPPTTIPQMTMPYYLKTTALIVTILGF 498
Cdd:MTH00066  416 TAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMKPQILTMPTFMKLAALLVTLLGL 495
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 499 ILALEISNMTKNLKyhYPSNAFKFSTLLGYFPTIMHRLAPYMNLSMSQKSASSLLDLIWLEAILPKTISLAQMKASTLVT 578
Cdd:MTH00066  496 LIALDLAKITSKTT--PKTKMHSFSNLLAFFPTIIHRLSPKTNLNSGQNIATHLTDMTWYEKSGPKGLTNQQLPPIKTIT 573
                         570       580
                  ....*....|....*....|....*
gi 1736209022 579 N-QKGLIKLYFLSFLITILISMMLF 602
Cdd:MTH00066  574 NiQTGLIKTYLTLFLITLLLMLILL 598
ND5 MTH00211
NADH dehydrogenase subunit 5; Provisional
28-604 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214459 [Multi-domain]  Cd Length: 597  Bit Score: 700.17  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  28 KPSNYPLYVKTAISYAFITSMIPTMMFIHSGQELIISNWHWLTIQTLKLSLSFKMDYFSMMFTPVALFVTWSIMEFSMWY 107
Cdd:MTH00211   23 PLNNSKLHIKKAVKLSFFISLIPLLIFLDQGLETILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWY 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 108 MHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGFILAMA 187
Cdd:MTH00211  103 MSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIGLLLSMV 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 188 WFLTNLNTWDLQQIFMLNpSDSNMPLIGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLT 267
Cdd:MTH00211  183 WLLLNLNSWEISQLFILN-LDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLF 261
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 268 ENNKFIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSII 347
Cdd:MTH00211  262 QNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSII 341
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 348 HSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATSFTAIYSTRII 427
Cdd:MTH00211  342 HGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLI 421
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 428 FFALLGQPRFPTLVSINENNPLLINSIKRLLIGSLFAGYIISNNIPPTTIPQMTMPYYLKTTALIVTILGFILALEISNM 507
Cdd:MTH00211  422 FLSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEILSLPFLLKLMPLLVTIVGLLLGLELVNL 501
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 508 TknlKYHYPSNAFKFSTLLGYFPTIMHRLAPYMNLSMSQKSASSLLDLIWLEAILPKTISLAQMKASTLVTN-QKGLIKL 586
Cdd:MTH00211  502 T---HKQLKTSTLSFSNMLGYYPPIIHRLLPKLSLKWGQTLSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSpQQGLIKS 578
                         570
                  ....*....|....*...
gi 1736209022 587 YFLSFLITILISMMLFNF 604
Cdd:MTH00211  579 YLALLLLSLLLILLLFLL 596
ND5 MTH00208
NADH dehydrogenase subunit 5; Provisional
45-597 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177251 [Multi-domain]  Cd Length: 628  Bit Score: 585.40  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  45 ITSMIPTMMFIHSG-QELIISNWHWLTIQTLKLSLSFKMDYFSMMFTPVALFVTWSIMEFSMWYMHSDPNINKFFKYLLL 123
Cdd:MTH00208   67 FLSLINLLIWILLGcPNINISLSNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLII 146
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 124 FLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDLQQIFM 203
Cdd:MTH00208  147 FLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSWNLNEILS 226
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 204 LNPSDS---NMPLIGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQSITLCL 280
Cdd:MTH00208  227 LNNSNSfliNILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLCLIL 306
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 281 GAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMG 360
Cdd:MTH00208  307 GSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMG 386
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 361 GLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFPTL 440
Cdd:MTH00208  387 GLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPL 466
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 441 VSINENNPLLINSIKRLLIGSLFAGYIISNNIPPTtiPQMTMPYYLKTTALIVTILGFILALEISNMTKNLkyHYPSNAF 520
Cdd:MTH00208  467 SPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNL--PPLTLPLILKSLPLIVTIIGAAFSFSFLLSLSSN--PINSNFF 542
                         490       500       510       520       530       540       550
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1736209022 521 KFSTLLGYFPTIMHRLAPYMNLSMSQKSASSLLDLIWLEAILPKTISLAQMKAS-TLVTNQKGLIKLYFLSFLITILI 597
Cdd:MTH00208  543 SFLSNQWFFVNISHSIIISFSFFTSLFGSTRTLDRGWSENIGPQGIGNTSSTLSkSYQLTQTGYIKQYLLSSTLLFLL 620
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
43-601 2.42e-148

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 441.51  E-value: 2.42e-148
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  43 AFITSMIPTMMFIHS--------GQELIISNWHWLTIQTLKLSLSFKMDYFSMMFTPVALFVTWSIMEFSMWYMHSDPNI 114
Cdd:COG1009    31 GWLAALAPLAAFVLSlllfpavlGGEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGL 110
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 115 NKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLN 194
Cdd:COG1009   111 ARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAG 190
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 195 TWDLQQIFMLNPSDSNMPLIGLA-----LAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTEN 269
Cdd:COG1009   191 TLNFSELLAAAPTILSSPLLTLIlllllLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFAL 270
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 270 NKFIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHS 349
Cdd:COG1009   271 SPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHA 350
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 350 LNdEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATSF-TAIYSTRIIF 428
Cdd:COG1009   351 TG-TRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLGAFlTAFYSFRLFF 429
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 429 FALLGQPRFPTLVSINENNPLLINSIKRLLIGSLFAGYIISNN----IPPTTIPQMTM----PYYLKTTALIVTILGFIL 500
Cdd:COG1009   430 LVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLleglLAPAAVLGGELhlahGLLLNALPLLLSLLGIAL 509
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 501 AL------EISNMTKNLKYHYPSNAFKFstllgYFPTIMHRLAPYMNLSMSQksaSSLLDLIWLEAILPKTISLAQMKAS 574
Cdd:COG1009   510 GYllylkrPLPALAERLKPLYRLLANKW-----YFDELYDALFVKPVRALAR---FLWFDRYVIDGIVNGLARLTLFSGR 581
                         570       580
                  ....*....|....*....|....*..
gi 1736209022 575 TLVTNQKGLIKLYFLSFLITILISMML 601
Cdd:COG1009   582 LLRRLQTGYLQFYALTILLGVVVLLLL 608
PRK06590 PRK06590
NADH:ubiquinone oxidoreductase subunit L; Reviewed
43-501 6.59e-139

NADH:ubiquinone oxidoreductase subunit L; Reviewed


Pssm-ID: 235836 [Multi-domain]  Cd Length: 624  Bit Score: 417.64  E-value: 6.59e-139
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  43 AFITSMIPTMMFIHSGQELI-ISNWHWLTIQTLKLSLSFKMDYFSMMFTPVALFVTWSIMEFSMWYMHSDPNINKFFKYL 121
Cdd:PRK06590   42 SALLSLVVFFDFLLGGGRAFsQTLWTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYL 121
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 122 LLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDLQQI 201
Cdd:PRK06590  122 NLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDEV 201
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 202 F-----MLNPSDSNMPLIGLAL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQ 274
Cdd:PRK06590  202 FaaapqFFGLGWSALTLICLLLfiGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEAL 281
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 275 SITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQ 354
Cdd:PRK06590  282 LFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQ 361
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 355 DIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYtNAWALLMTLIATSFTAIYSTRIIFFALLGQ 434
Cdd:PRK06590  362 DIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEAAFANG-HINLFVAGLVGAFLTAFYSFRLIFLVFHGK 440
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 435 PR----FPTLVSINENNPLLInsikrLLIGSLFAGYIISNNI---------PPTTIPQMTMPYYLKTTALIVTILGFILA 501
Cdd:PRK06590  441 EKekihHPHESPAVMTLPLIV-----LAVLSVFAGALIVPPFlgvlpltteLAHGEAEHHLPVWVALLPLVVALAGIALA 515
NDH_I_L TIGR01974
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ...
39-501 2.01e-131

proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]


Pssm-ID: 273905 [Multi-domain]  Cd Length: 609  Bit Score: 398.19  E-value: 2.01e-131
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  39 AISYAFITSMIPTMMFIHSGQELIISN--WHWLTIQTLKLSLSFKMDYFSMMFTPVALFVTWSIMEFSMWYMHSDPNINK 116
Cdd:TIGR01974  36 SVGLSAALSAFVFVDFFLNGEGEAFTQslFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSR 115
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 117 FFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTW 196
Cdd:TIGR01974 116 FFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTL 195
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 197 DLQQIFMLNPSDSN--MPLIGLAL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKF 272
Cdd:TIGR01974 196 NFQEVFALAPGAFFsaLTLICLLLfiGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPT 275
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 273 IQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLND 352
Cdd:TIGR01974 276 ALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHH 355
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 353 EQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATSFTAIYSTRIIFFALL 432
Cdd:TIGR01974 356 EQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFH 435
                         410       420       430       440       450       460       470
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1736209022 433 GQPRFPTLVSINENNPLLINSIKRLLIGSLFAGYIISNNIPP--TTIPQMT--------MPYYLKTTALIVTILGFILA 501
Cdd:TIGR01974 436 GKERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEFlkGVLPTSAepalehhhVPALEIWSPTAVAILGILLA 514
ND5 MTH00020
NADH dehydrogenase subunit 5; Reviewed
66-597 3.09e-118

NADH dehydrogenase subunit 5; Reviewed


Pssm-ID: 214400 [Multi-domain]  Cd Length: 610  Bit Score: 364.01  E-value: 3.09e-118
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  66 WHWLTIQTLKLSLSFKMDYFSMMFTPVALFVTWSIMEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWE 145
Cdd:MTH00020   62 WRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWE 141
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 146 GVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDLQQIF-MLNPSDSN---MPLIGLALAAT 221
Cdd:MTH00020  142 GVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVFnMVVSAPSSditLICLFLFIGAV 221
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 222 GKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQSITLCLGAITTLFTAMCALTQNDIKKI 301
Cdd:MTH00020  222 GKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKV 301
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 302 IAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALT 381
Cdd:MTH00020  302 IAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLM 381
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 382 GMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATSFTAIYSTRIIFFALLGQP--RFPTLVSINENNPLLINSIKRLLI 459
Cdd:MTH00020  382 GFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTnlKKAVFFHLHEGDWNLLLPLGILAL 461
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 460 GSLFAGYIISNNI------PPTTIPQMT--MPYYLKTTALIVTILGF-----ILALEISNMTKNLkYHYPSNAFKFSTLL 526
Cdd:MTH00020  462 GSIFVGYLAKEMIwsfqitLPPIVPLSIklLPVFLSLGGIGLVIILYfysskTFRVPFSFIGRNS-YTFLGSAWQFNYIL 540
                         490       500       510       520       530       540       550
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1736209022 527 GYFptIMHRLAPymnlsMSQKSASSLLDLIWLEAILPKTISLAQMKASTLVTN-QKGLIKLYFLSFLITILI 597
Cdd:MTH00020  541 NYF--LIKKIWK-----GGHLISYRTIDKGVLELVGPKGISNFLIILTQGLSSlQSGLVFNYALVILIGVAI 605
ND5 MTH00210
NADH dehydrogenase subunit 5; Provisional
66-593 1.14e-116

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177253 [Multi-domain]  Cd Length: 616  Bit Score: 360.09  E-value: 1.14e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  66 WHWLTIQTLKLSLSFKMDYFsmmfTPVALFVTWSIME----FSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLF 141
Cdd:MTH00210   62 WRWFDSELLTTYFGLQFDSL----TSTMLIVITSVSAlvhiYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLF 137
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 142 IGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDLQQIFML---NPSDSNMPLIGLAL 218
Cdd:MTH00210  138 IGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISSLlvtNINKESLTIICLLL 217
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 219 --AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQSITLCLGAITTLFTAMCALTQN 296
Cdd:MTH00210  218 fiGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAATVGVVQN 297
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 297 DIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVG 376
Cdd:MTH00210  298 DLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIG 377
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 377 SLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFPTLVSINENNPLLINSIKR 456
Cdd:MTH00210  378 SLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVFIGVHESSWNITFPL 457
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 457 LL--IGSLFAGYI-----ISNNIPPttipqmTMPYYLKTTALIVTILGFILALEISNMTKNLKYHYPSNAFKFSTLLGY- 528
Cdd:MTH00210  458 LLlaFGSIFVGYLgkevvLSNVIPP------IVPNSIKMIPLLFSLLGALLAFVIYNSMVFLIKISRRGVSIRLYHVIYt 531
                         490       500       510       520       530       540       550
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1736209022 529 -------FPTIMHRLAPYMNLSMSQKSASSLLDLIWLEAILPKTISLAQMKASTLVTN-QKGLIKLYFLSFLI 593
Cdd:MTH00210  532 flnsawqFNYVINHFIVKNIWKFGHLITYRIIDRGLLEIIGPRGISKVLIKLTQKISNlQSGMVFNYALIMII 604
ND5 MTH00165
NADH dehydrogenase subunit 5; Provisional
44-603 2.95e-116

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214444 [Multi-domain]  Cd Length: 573  Bit Score: 357.53  E-value: 2.95e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  44 FITSMIPTMMFIHSGQELIIsNWHWLTIQTLKLSLSFKMDYFSMMFTPVALFVTWSIMEFSMWYMHSDPNINKFFKYLLL 123
Cdd:MTH00165   15 SLILFFLGLYFLLNDYSLFI-EWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNINRFIYLVLL 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 124 FLITMLILVTANNLFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLtNLNTWDLQQIFM 203
Cdd:MTH00165   94 FVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMM-NFGSWNFIFYLD 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 204 LNPSDSNMPLIGLA--LAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLtENNKFIQSITLCLG 281
Cdd:MTH00165  172 FMKNSFEMLLIGLLimLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNL-LFSSFFSKFLLLIS 250
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 282 AITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGG 361
Cdd:MTH00165  251 LLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNSQDIRFMGG 330
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 362 LFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFPTLV 441
Cdd:MTH00165  331 LSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGDFNLKSLN 410
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 442 SINENNPLLINSIKRLLIGSLFAGYIISNNIPPTTIpQMTMPYYLKTTALIVTILGFILALEISNMT--KNLKYHYPSNA 519
Cdd:MTH00165  411 NLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPY-MICLPFYLKLLTLFVILLGGWLGYELSLMSlsYNLKSLKNYKL 489
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 520 FKFSTLLGYFPTIMHRLAPYMNLSMSQKSaSSLLDLIWLEAILPKTISLAQMKASTLVTN-QKGLIKLYFLSFLITILIS 598
Cdd:MTH00165  490 SSFLGSMWFMPFLSTYGISYYPLNLGSLS-LKSFDQGWSEYFGGQGLYNFLKKLSKLIQWlQNNNLKIYLLSFLLWMIIL 568

                  ....*
gi 1736209022 599 MMLFN 603
Cdd:MTH00165  569 LLLFL 573
ND5 MTH00151
NADH dehydrogenase subunit 5; Provisional
42-604 3.02e-113

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214436 [Multi-domain]  Cd Length: 565  Bit Score: 349.53  E-value: 3.02e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  42 YAFITSMIPTMMFIHSGQELIISNWHWLTIQTLKLSLSFKMDYFSMMFTPVALFVTWSIMEFSMWYMHSDPNINKFFKYL 121
Cdd:MTH00151   12 FSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLV 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 122 LLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAVLYNRIGDiGFILAMAWFLTNLNTWDLQQI 201
Cdd:MTH00151   92 MLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALV-IYYQNKKSLSAGMLTALTNRIGD-VLILLSIALLVLLGHWSILSM 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 202 FMLNPSDSNMPLIglALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQSITLCLG 281
Cdd:MTH00151  170 WDFKLSGWLGLLL--VLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLLFIS 247
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 282 AITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGG 361
Cdd:MTH00151  248 LLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLLGS 327
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 362 LFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFPTLV 441
Cdd:MTH00151  328 LFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSSLS 407
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 442 SINENNPLLINSIKRLLIGSLFAGYIISnNIPPTTIPQMTMPYYLKTTALIVTILGFILALeISNMTKNLKYHYPSNAFK 521
Cdd:MTH00151  408 SKSDEDFYVSLPMLLLSLGALIGGKLLQ-SLFEGFSEEFFLPSYLKLLIGFVILLGLFLSF-GFWDSGFSSSKMVKLSFF 485
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 522 FSTLLGYFPTIMHRLApYMNLSMSQKSASSlLDLIWLEAILPKtiSLAQMKASTLVTNQKGLIKLYFLSFLITILISMML 601
Cdd:MTH00151  486 FSSMWFLSPLSSQPLK-SLSLKLSNSSMKS-LDMGWLEILGGQ--GVFKANKSFSVLNESWPVKWFNFFIGLILLLVLFL 561

                  ...
gi 1736209022 602 FNF 604
Cdd:MTH00151  562 VVI 564
ND5 MTH00209
NADH dehydrogenase subunit 5; Provisional
44-602 4.54e-98

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177252 [Multi-domain]  Cd Length: 564  Bit Score: 310.42  E-value: 4.54e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  44 FITSMIPTMMFiHSGQELIISNWHWLTIQTLKLSLSFKMDYFSMMFTPVALFVTWSIMEFSMWYMHSDPNINKFFKYLLL 123
Cdd:MTH00209   13 FLFSFLMFVIF-MWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 124 FLITMLILVTANNLFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLtNLNTWDlqqIFM 203
Cdd:MTH00209   92 FILSMNFLIFVPNLITLLLGWDGLGLVSYLLV-IYYQNSKSLSAGMLTALTNRVGDALLILSIAWML-MHGNWN---IFY 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 204 LNPSDSNMPLIGL--ALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQSITLCLG 281
Cdd:MTH00209  167 LNFNSNLGSVISVliVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLLG 246
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 282 AITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGG 361
Cdd:MTH00209  247 SLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGN 326
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 362 LFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFPTLV 441
Cdd:MTH00209  327 LWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLN 406
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 442 SINENNPLLINSIKRLLIGSLFAGYIISNNIPPTTIPqMTMPYYLKTTALIVTILGFILALEISNMTKNLKYHYPSNAFk 521
Cdd:MTH00209  407 SSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNS-VVLPWFLKLLPIMLILFGVLLMYMVLKKNFFLIKGYKVNYF- 484
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 522 FSTLlgYFPTIMHRLAPYMNLSMSQKSASSLLDLIWLEAILPKTISLAQMKASTLVTN-QKGLIKLYFLSFLITILISMM 600
Cdd:MTH00209  485 LSQM--WFLPDLSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIiQNNSLKLFVTFMMLILLGVIL 562

                  ..
gi 1736209022 601 LF 602
Cdd:MTH00209  563 FM 564
ND5 MTH00207
NADH dehydrogenase subunit 5; Provisional
44-603 3.71e-97

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 164753 [Multi-domain]  Cd Length: 572  Bit Score: 308.23  E-value: 3.71e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  44 FITSMIPTMMFIHSGQELIISnWHWLTIQTLKLSLSFKMDYFSMMFTPVALFVTWSIMEFSMWYMHSDPNINKFFKYLLL 123
Cdd:MTH00207   18 SILMFPLSLYLMMCNKTILIE-WEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFISLVLL 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 124 FLITMLILVTANNLFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLtNLNTWDLqqIFM 203
Cdd:MTH00207   97 FVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTL-NQGHWSI--TNM 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 204 LNPSDSNMPLIGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQSITLCLGAI 283
Cdd:MTH00207  173 WQTDMNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTYWFNPALLLTASL 252
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 284 TTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLF 363
Cdd:MTH00207  253 TMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGNLT 332
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 364 KAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFPTLVSI 443
Cdd:MTH00207  333 NQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSSPYHHL 412
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 444 NENNPLLINSIKRLLIGSLFAGYIIsNNIPPTTIPQMTMPYYLKTTALIVTILGFILALEI--SNMTKNLKYHYPSNAFK 521
Cdd:MTH00207  413 EDEDKSLTTPMLLLTLGAITSGSAL-NWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFttPNITKTPLLINNPLSHF 491
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 522 FSTLLGYFPTIMHR--LAPYMNLSmsqKSASSLLDLIWLEAILPKTISLAQMKASTLVTNQKGLIKLYFLSFLITILISM 599
Cdd:MTH00207  492 ASCLMWFLVPLSSQfiMSTPMNLS---HNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYLMMSFVLLTII 568

                  ....
gi 1736209022 600 MLFN 603
Cdd:MTH00207  569 IIMT 572
ND5 MTH00032
NADH dehydrogenase subunit 5; Provisional
63-602 3.59e-92

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214407 [Multi-domain]  Cd Length: 669  Bit Score: 298.03  E-value: 3.59e-92
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  63 ISNWHWLTIQTLKLSLSFKMDYFSMMFTPVALFVTWSIMEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLFI 142
Cdd:MTH00032   59 IELYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFI 138
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 143 GWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDLQQI------------------FML 204
Cdd:MTH00032  139 GWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggsvgsgimdrgyygggAYE 218
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 205 NPSDSNMPL-IGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQSITLCLGAI 283
Cdd:MTH00032  219 SPLAPFAIIgILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGAL 298
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 284 TTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPY-LAFLHICTHAFFKAMLFMCSGSIIHSLN-DEQDIRKMGG 361
Cdd:MTH00032  299 TAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSHnVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGG 378
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 362 LFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIE------------------------------------AANTSYTN 405
Cdd:MTH00032  379 LIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILEltysgrnmgipfgssllkiqgdigikkddrgsiggpEGYPSRGS 458
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 406 AWALLMTLIATSFTAIYSTRIIFFALLGQPRFP--TLVS--INENNPLLINSIKRLLIGSLFAGYIIsNNIPPTTIPQMT 481
Cdd:MTH00032  459 AFAFWLGTVAALLTAFYSIRLVYITFIISPNSPkeSLISshINIVDKRVLTVLSLLCFGAIFVGYLI-QDILIGDIEHPI 537
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 482 MPYYLKTTALIVTILGFILALEISNMTKNLKYHYPSNAFKFSTLLGY---------FPTIMHRLAPYMNLSMSQKSASSL 552
Cdd:MTH00032  538 VPPLIKVMPTLMGLFGMGLCLWAQKGTREGELYWGFDPIGPSFLLSIysflggawqGDHLINKLVAIPLFSFGHWGIYKT 617
                         570       580       590       600       610
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1736209022 553 LDLIWLEAILPKTISLAQMKASTLVTN-QKGLIKLYFLSFLITILISMMLF 602
Cdd:MTH00032  618 LDRGWLELFGPQGISTIALRVSQFISNlQSGVISRYALVLLSFTIIFLALW 668
PRK07376 PRK07376
NADH-quinone oxidoreductase subunit L;
39-436 3.76e-89

NADH-quinone oxidoreductase subunit L;


Pssm-ID: 236005 [Multi-domain]  Cd Length: 673  Bit Score: 290.00  E-value: 3.76e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  39 AISYAFITSMIptmmfihSGQELIISNWHWLTIQTLKLSLSFKMDYFSMMFTPVALFVTWSIMEFSMWYMHSDPNINKFF 118
Cdd:PRK07376   53 VLSYALLWSQI-------QGHEPYERLFEWASAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFF 125
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 119 KYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDL 198
Cdd:PRK07376  126 AYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDF 205
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 199 QQIF--MLNPSDSNMPLIGLA--------LAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTE 268
Cdd:PRK07376  206 DGIAdrLSELVSSGAVSGWLAlllcilvfLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFE 285
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 269 NNKFIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIH 348
Cdd:PRK07376  286 QFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIH 365
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 349 SLND--------EQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWalLMTLIATSFTA 420
Cdd:PRK07376  366 GMEEvvghdpvlAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANPALW--FVGFLTAGMTA 443
                         410
                  ....*....|....*.
gi 1736209022 421 IYSTRIIFFALLGQPR 436
Cdd:PRK07376  444 FYMFRMYFLTFEGEFR 459
ndhF CHL00025
NADH dehydrogenase subunit 5
66-428 3.47e-71

NADH dehydrogenase subunit 5


Pssm-ID: 214338 [Multi-domain]  Cd Length: 741  Bit Score: 243.65  E-value: 3.47e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  66 WHWltiqTLKLSLSFKMDYF--------SMMFTPVALFVtwsiMEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNL 137
Cdd:CHL00025   73 WSW----TINNDFSLEFGYLidpltsimLILITTVGILV----LIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNL 144
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 138 FQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGF---ILAMAWFLTNLNTWDLQQIF--MLNPSDSNMP 212
Cdd:CHL00025  145 IQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLllgILGFYWITGSFEFRDLFEIFnnLIYNNEVNLL 224
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 213 LIGLA-----LAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQSITLCLGAITTLF 287
Cdd:CHL00025  225 FATLCafllfLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALL 304
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 288 TAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSL--------NDEQDIRKM 359
Cdd:CHL00025  305 GATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLM 384
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1736209022 360 GGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIeaantsyTNAW--ALLMTLIATS---FTAIYSTRIIF 428
Cdd:CHL00025  385 GGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEIL-------NDSWlySPIFAIIAWStagLTAFYMFRIYL 451
PRK12648 PRK12648
putative monovalent cation/H+ antiporter subunit A; Reviewed
60-436 2.42e-64

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237157 [Multi-domain]  Cd Length: 948  Bit Score: 227.77  E-value: 2.42e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  60 ELIISNWHWLtiQTLKLSLSFKMDYFSMMFTPVALFVTWSIMEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQ 139
Cdd:PRK12648   54 EVIRAEIEWL--PALGLNLSLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLIL 131
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 140 LFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGdiGFILaMAWFLTNLN---TWDLQQIF----MLNPSDSNMP 212
Cdd:PRK12648  132 LVVFWELTSLSSFLLIGYWHHRADARRGARMALTVTGAG--GLAL-LAGVLLLGHivgSYDLDVVLaagdLIRAHPLYPP 208
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 213 -LIGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPL---TENNKFIQSITlclGAITTLFT 288
Cdd:PRK12648  209 aLVLILLGAFTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVlagTEEWFWIVGGA---GLITLLLG 285
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 289 AMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPY---LAFLHICTHAFFKAMLFMCSGSIIHslndE---QDIRKMGGL 362
Cdd:PRK12648  286 AYFALFQHDLKGLLAYSTISHLGLITLLLGLGSPLaavAAIFHIINHATFKASLFMAAGIIDH----EtgtRDMRRLSGL 361
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1736209022 363 FKAMPFTTTALIVGSLALTGMPFLTGFYSKDLII-EAANTSYTNAWALLMTLIAT---SFTAIYSTRIIFFALLGQPR 436
Cdd:PRK12648  362 RRLMPITATLAMVAAAAMAGVPLLNGFLSKEMFFaETLDTHLLGSLDWLLPVAATlagAFSVAYSLRFIHDVFFGPPP 439
PRK12647 PRK12647
putative monovalent cation/H+ antiporter subunit A; Reviewed
42-415 2.70e-64

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237156 [Multi-domain]  Cd Length: 761  Bit Score: 225.18  E-value: 2.70e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  42 YAFITSMIPTMMFIH--------SGQELIISNWHWltIQTLKLSLSFKMDYFSMMFtpvALFVT---WSIMEFSMWYMHS 110
Cdd:PRK12647   16 AGWLLALLPLALFLYflsfipeiAAGETVRGGYAW--VPSLGVNLSFLLDGLSLTF---ALLITgigTLIVLYAGGYLKG 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 111 DPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDI----GFILAm 186
Cdd:PRK12647   91 HPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLallaGLILL- 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 187 aWFLTNlnTWDLQQIFMLNPSDSNMPLIGLAL-----AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLI 261
Cdd:PRK12647  170 -GNVTG--TYSLSELLASGDVIREHPLYLAILllvlgGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLA 246
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 262 RFYPLTENNKFIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYL---AFLHICTHAFFKAM 338
Cdd:PRK12647  247 RLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSELAikaAVLFLVAHSLYKGA 326
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1736209022 339 LFMCSGSIIHSLNdEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAanTSYTNAWALLMTLIA 415
Cdd:PRK12647  327 LFMVAGIIDHETG-TRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEA--LLEAPLWSLILTVAA 400
PRK12650 PRK12650
DUF4040 family protein;
65-436 4.93e-61

DUF4040 family protein;


Pssm-ID: 237158 [Multi-domain]  Cd Length: 962  Bit Score: 218.76  E-value: 4.93e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  65 NWHWLTIQTL-----KLSLSFKMDYFSMMFTPVALFVTWSIMEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQ 139
Cdd:PRK12650   55 TWSVTWIPDLlgngvDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVV 134
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 140 LFIGWEGVGIMSFLLIGwwYGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDLQQIfMLNPSDSNMPL------ 213
Cdd:PRK12650  135 LFVAWELVSLASFFLIA--RSGSGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGI-LHSDVWAEKPGlttvva 211
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 214 IGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQSITLCLGAITTLFTAMCAL 293
Cdd:PRK12650  212 VLIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAV 291
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 294 TQNDIKKIIAFSTSSQLGLMMVTIGINQPY---LAFLHICTHAFFKAMLFMCSGSIIHSLNdEQDIRKMGGLFKAMPFTT 370
Cdd:PRK12650  292 QKTDLKKLTAYSTVSQLGWIVATIGVGTPFaltAAVVHTLAHALFKSSLFMLIGVVDHQAG-TRDIRRLGSLWRRMPFTF 370
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 371 TALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATSFTAI----YSTRIIFFALLGQPR 436
Cdd:PRK12650  371 VSVTIAALSMAAVPPLFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAALGAVftfaYSARLVLGAFVDGPR 440
HyfB COG0651
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ...
76-430 1.95e-58

Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];


Pssm-ID: 440416 [Multi-domain]  Cd Length: 430  Bit Score: 201.91  E-value: 1.95e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  76 LSLSFKMDYFSMMFTPVALFVTWSIMEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLI 155
Cdd:COG0651    68 FGIVLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLV 147
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 156 GWwYGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDLQQI-FMLNPSDSNMPLIGLALAATG---KSAQFGLHP 231
Cdd:COG0651   148 AL-GGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaARLAELDPGLLLAAFALLLVGfgiKAALFPLHF 226
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 232 WLPSAM-EGPTPVSALLhSSTMVVAGIFLLIRFYPL---TENNKFIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTS 307
Cdd:COG0651   227 WLPDAYpAAPSPVSALL-SGLLTKVGVYAILRVLTLlfgADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSV 305
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 308 SQLGLMMVTIGINQPYL---AFLHICTHAFFKAMLFMCSGSIIHSLNdEQDIRKMGGLFKAMPFTTTALIVGSLALTGMP 384
Cdd:COG0651   306 SQIGYILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERATG-TRDLDKLGGLGKRMPLTAAAFLIGALALAGLP 384
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*..
gi 1736209022 385 FLTGFYSKDLIIEAANTSytNAWALLMTLIATSF-TAIYSTRIIFFA 430
Cdd:COG0651   385 PLSGFVSKWLLLQAALEA--GAWLLAAVLLLSSLlTLAYFVRIFGRA 429
PRK12644 PRK12644
putative monovalent cation/H+ antiporter subunit A; Reviewed
32-430 7.49e-58

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237154 [Multi-domain]  Cd Length: 965  Bit Score: 209.39  E-value: 7.49e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  32 YPLYVKTAISYAFITSMIPTMMfihSGQELiisNWHWLTIQTLKLSLSFKMDYFSMMFTPVALFVTWSIMEFSMWYMHSD 111
Cdd:PRK12644   28 YVLALVPAAAFVWVLAQWPAVL---AGGAP---TEVVPWIPSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDD 101
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 112 -PNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDigfiLAMAWFL 190
Cdd:PRK12644  102 ePRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGG----LAMLVGI 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 191 TNL----NTWDLQQIfMLNPSDSNMPLIGLAL---AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRF 263
Cdd:PRK12644  178 IILgqaaGTYRLSEL-LADPPTGPAVSVAVVLilvGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARL 256
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 264 YPLTENNKFIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQP--YLAFLH-ICTHAFFKAMLF 340
Cdd:PRK12644  257 APGFADVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRdaALAGLAmLLAHALFKAALF 336
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 341 MCSGSIIHSLNdEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEA---ANTSYTNAWALLMTLIATS 417
Cdd:PRK12644  337 LVVGIIDHSTG-TRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAvlhDGALGPAGPVVLAGIVLGS 415
                         410
                  ....*....|....
gi 1736209022 418 -FTAIYSTRIIFFA 430
Cdd:PRK12644  416 iLTVAYSLRFLWGA 429
2a6301s01 TIGR00940
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ...
74-436 4.86e-57

Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273353 [Multi-domain]  Cd Length: 793  Bit Score: 205.47  E-value: 4.86e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  74 LKLSLSFKMDYFSMMFTPVALFVTWSIMEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFL 153
Cdd:TIGR00940  65 LGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFL 144
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 154 LIGWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPSDSNMPLIGLA-----LAATGKSAQFG 228
Cdd:TIGR00940 145 LISYWHHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAVIASADAIRNSPLFGTAmvlvlLGAFTKSAQFP 224
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 229 LHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSS 308
Cdd:TIGR00940 225 FHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTIS 304
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 309 QLGLMMVTIGINQPYL----------------AFLHICTHAFFKAMLFMCSGSIIHSlNDEQDIRKMGGLFKAMPFTTTA 372
Cdd:TIGR00940 305 QLGLIMVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTL 383
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1736209022 373 LIVGSLALTGMPFLTGFYSKDLIIEAANTSY------TNAWALLMTLIAT---SFTAIYSTRIIFFALLGQPR 436
Cdd:TIGR00940 384 AMIASAAMAGVPPFNGFLSKEMFFAEAITAHlvnpfdTVTLGYLFPYVATvasVFTFVYSLRFIHGVFFGRPK 456
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
134-399 1.97e-55

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 189.45  E-value: 1.97e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 134 ANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDLQQI-----FMLNPSD 208
Cdd:pfam00361   1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltGGLNSSG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 209 SNMPLIGLALAATGKSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRFYPLTEN-NKFIQSITLCLGAITTL 286
Cdd:pfam00361  81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPsSPFIQQILLILAIISML 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 287 FTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPY---LAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLF 363
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
                         250       260       270
                  ....*....|....*....|....*....|....*.
gi 1736209022 364 KAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAA 399
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAA 275
PRK12646 PRK12646
DUF4040 family protein;
71-438 9.89e-55

DUF4040 family protein;


Pssm-ID: 183646 [Multi-domain]  Cd Length: 800  Bit Score: 199.21  E-value: 9.89e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  71 IQTLKLSLSFKMDYFSMMFTPVALFVTWSIMEFSMWYM-HSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGI 149
Cdd:PRK12646   65 MKTLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLsSRKDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSV 144
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 150 MSFLLIGWWYGRADANTAALQAVLYNRIGD----IGFILAMAWFLTNLNTWDLQQIFMLNPSDSNMPLIGLAL-AATGKS 224
Cdd:PRK12646  145 SSFLLISYWYNNGDSQFGAIQSFMITVFGGlallVGFIMLYIMTGTNNITEILGQADHIKNHGLFIPMIFMFLlGAFTKS 224
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 225 AQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQSITLCLGAITTLFTAMCALTQNDIKKIIAF 304
Cdd:PRK12646  225 AQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAY 304
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 305 STSSQLGLMMVTIGINQPYL-----------------AFLHICTHAFFKAMLFMCSGSIIHSlNDEQDIRKMGGLFKAMP 367
Cdd:PRK12646  305 STISQLGMIMAMVGIGGGYAqhqqdaiasiyvfvlfaALFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLFP 383
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 368 FTTTALIVGSLALTGMPFLTGFYSKDLIIEA-ANTSYTNAWALLMT-------LIATSFTAIYSTRII---FFALLGQPR 436
Cdd:PRK12646  384 KMNLVMTIAALSMAGVPFLNGFLSKEMFLDAlTQTGQLSQFSLISMiiivfigVIASIFTFTYALYMVkevFWGKYDSKV 463

                  ..
gi 1736209022 437 FP 438
Cdd:PRK12646  464 FT 465
PRK07390 PRK07390
NAD(P)H-quinone oxidoreductase subunit F; Validated
54-435 1.60e-54

NAD(P)H-quinone oxidoreductase subunit F; Validated


Pssm-ID: 236008 [Multi-domain]  Cd Length: 613  Bit Score: 195.51  E-value: 1.60e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  54 FIHS--------GQELIISNWHWLTIQTLKLSLSFKMDYFSMMFTPVALFVTWSIMEFSMWYMHSDPNINKFFKYLLLFL 125
Cdd:PRK07390   51 FVHSllalraiwNQPPQQLSFPWLQVADLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFE 130
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 126 ITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDLQQIFM-- 203
Cdd:PRK07390  131 AAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLAAwa 210
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 204 --LNPSDSNMPLIGLALAA--TGKSAQFGLHPWLPSAMEGPTPVSaLLHSSTMVVAGIFLLIRFYPLTENNKFIQSITLC 279
Cdd:PRK07390  211 atANLDPLTATLLGLALIAgpTGKCAQFPLHLWLDEAMEGPNPAS-ILRNSVVVATGAWVLIKLQPVLALSPVALTVLIV 289
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 280 LGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDeQDIRKM 359
Cdd:PRK07390  290 IGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILTTIT-QDLTEL 368
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1736209022 360 GGLFKAMPFTTTALIVGSLALTGMPFLTGFYSkdlIIEAANTSYTNAWALLMTLIATS-FTAIYSTRIIFFALLGQP 435
Cdd:PRK07390  369 GGLWSRMPATTLAFLVGSAGLVALLPLGGFWA---LLRLADGLWAVSPWLVGVLLLVNaLTAFNLTRVFRLVFLGKP 442
ND5 MTH00095
NADH dehydrogenase subunit 5; Provisional
76-433 2.71e-53

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177158 [Multi-domain]  Cd Length: 527  Bit Score: 190.51  E-value: 2.71e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  76 LSLSFKMDYFSMMFTPVALFVTWSIMEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLI 155
Cdd:MTH00095   37 LSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLV 116
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 156 gWWYGRADANTAALQAVLYNRIGDIgFILAMAWFLTNLNTWDLQQIFMlnpsdSNMPLIGLALAATGKSAQFGLHPWLPS 235
Cdd:MTH00095  117 -LFYNNWDSNSGAMNTALTNRIGDF-FIFLFFSGFIFSSYYFFSFSFF-----SSSMILMLLLTSFTKSAQFPFSSWLPK 189
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 236 AMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIqSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMV 315
Cdd:MTH00095  190 AMSAPTPVSSLVHSSTLVTAGLILLMNFSYLILNMNVM-KIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSML 268
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 316 TIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLI 395
Cdd:MTH00095  269 TFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELI 348
                         330       340       350
                  ....*....|....*....|....*....|....*...
gi 1736209022 396 IEAANTSYTNAWALLMTLIATSFTAIYSTRIIFFALLG 433
Cdd:MTH00095  349 LELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLS 386
PRK12645 PRK12645
monovalent cation/H+ antiporter subunit A; Reviewed
42-436 3.45e-50

monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237155 [Multi-domain]  Cd Length: 800  Bit Score: 185.90  E-value: 3.45e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  42 YAFITSMIPTMMfihSGQELIIS-NWhwltIQTLKLSLSFKMDYFSMMFTPV-----ALFVTWSImefsmWYMHSD-PNI 114
Cdd:PRK12645   42 FIYFLSLIPTTM---SGNTVMKTlPW----IPSLGINFTLYVDGLSLLFALLitgigSLVVLYSI-----YYLSKKkEQL 109
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 115 NKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDI----GFIL--AMAw 188
Cdd:PRK12645  110 GNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLsmlgGFILlyIMT- 188
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 189 fltnlNTWDLQQIFMLNPSDSNMPLIGLA-----LAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRF 263
Cdd:PRK12645  189 -----GSFSIREMIANADEIQNSPLFIPAmililLGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARF 263
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 264 YPL-TENNKFIQSITLcLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGI-----------NQPYL-----AF 326
Cdd:PRK12645  264 TPIfAGSQVWFWTVTL-VGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIgaaslhyqgddSKIYAaaitaAI 342
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 327 LHICTHAFFKAMLFMCSGSIIHSLNdEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEA------AN 400
Cdd:PRK12645  343 FHLINHATFKGSLFMIVGIVDHETG-TRDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFESmlnateAN 421
                         410       420       430
                  ....*....|....*....|....*....|....*....
gi 1736209022 401 TSYTNAWALLMTLIA---TSFTAIYSTRIIFFALLGQPR 436
Cdd:PRK12645  422 LFSLDTWGVLFPVIAwvaSVFTFVYSIIFIFKTFFGKYK 460
PRK06525 PRK06525
hydrogenase 4 subunit D; Validated
113-423 1.14e-49

hydrogenase 4 subunit D; Validated


Pssm-ID: 180606 [Multi-domain]  Cd Length: 479  Bit Score: 179.40  E-value: 1.14e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 113 NINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWwYGRADANTAALQAVLYNRIGDIGFILAMAWFLTN 192
Cdd:PRK06525  111 GTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISY-YQSPKALRSALKALLITHIGSLGLYLAAATLFLQ 189
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 193 LNTWDLQQIFMLNPSDSNMPLIGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFypLTENNKF 272
Cdd:PRK06525  190 TGTFALSALSGLHGSLKYLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARA--IQSMGPI 267
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 273 IQSITLCLGAITTLFTAMCALT---QNDIKKIIAFSTSSQLGLMMVTI--GINQPYLAF----LHICTHAFFKAMLFMCS 343
Cdd:PRK06525  268 PHVIGYVGAVMAIVTLLYGFLMylpQQDMKRLLAYSTITQLGYMFFGLslAILGSRLALegsiAYIFNHAFAKSLFFLVA 347
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 344 GSIIHSLNdEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATSFTAIYS 423
Cdd:PRK06525  348 GALSYSCG-TRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLLLIESVAS 426
PRK12649 PRK12649
putative monovalent cation/H+ antiporter subunit A; Reviewed
76-504 5.49e-47

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 183649 [Multi-domain]  Cd Length: 789  Bit Score: 176.56  E-value: 5.49e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  76 LSLSFKMDYFSMMFTPVALFVTWSIMEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLI 155
Cdd:PRK12649   72 VEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLI 151
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 156 GWWYGRADANTAALQAVLYNRIGDIgFILAMAWFLTNLN-TWDLQQIFMLNPSDSNMP--------LIGLALAATGKSAQ 226
Cdd:PRK12649  152 GYWRHRPESVYGATKSLLITAGGGL-FMFAGFLLLHVITgTYDIATILQDSELIENIKghplflitLILIFIGAAAKSAQ 230
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 227 FGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQSITLCLGAITTLFTAMCALTQNDIKKIIAFST 306
Cdd:PRK12649  231 GPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYST 310
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 307 SSQLGLMMVTIGI---NQPYLAF----LHICTHAFFKAMLFMCSGSIIHSLNdEQDIRKMGGLFKAMPFTTTALIVGSLA 379
Cdd:PRK12649  311 ISQLAYLMTMYGYttyHEPGLGVaaatFHLLNHATFKACLFLVAGIVAHEAA-TRDIRKLGGLRKEMPITFIVASIAALA 389
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 380 LTGMPFLTGFYSKDLIIEAA---NTSYTNAWALLMTLIATS---FTAIYSTRIIFFALLGQPRFPTLVSINENNPLLINS 453
Cdd:PRK12649  390 MAGIPPLNGFLSKEMFYETSvemGALIGGPFTIIIPAVAVLggvFTFAYSIKLIDGIFLGERTHDHLPHHIHEAPYVMLI 469
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1736209022 454 IKRLLIG-----SLFAGYIISNNIPPTTIPQMTMPYYLK-------TTALIVTILGFILALEI 504
Cdd:PRK12649  470 PAAFLAGlvilfGLVPSIPIHNIIEPATSGIVLETAHLHvklwhgfTPALMMTIITFILGLLI 532
NADH5_C pfam06455
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ...
422-602 2.80e-46

NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.


Pssm-ID: 368917 [Multi-domain]  Cd Length: 181  Bit Score: 161.18  E-value: 2.80e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 422 YSTRIIFFALLGQPRFPTLVSINENNPLLINSIKRLLIGSLFAGYIISNNIPPTTiPQMTMPYYLKTTALIVTILGFILA 501
Cdd:pfam06455   1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKP-PMMTMPLYLKLLALLVTILGLLLG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 502 LEISNMT-KNLKYHYPSNAFKFSTLLGYFPTIMHRLAPYMNLSMSQKSASSlLDLIWLEAILPKTISLAQMKASTLVTN- 579
Cdd:pfam06455  80 LELSNLSnKQLKKSLNFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQ-IDQGWSEKFGPQGIAKTLMTLSKIIQNs 158
                         170       180
                  ....*....|....*....|...
gi 1736209022 580 QKGLIKLYFLSFLITILISMMLF 602
Cdd:pfam06455 159 QKGLIKIYLLSFLLWLLLLLLLI 181
PRK12667 PRK12667
putative monovalent cation/H+ antiporter subunit D; Reviewed
83-476 1.50e-39

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237167 [Multi-domain]  Cd Length: 520  Bit Score: 152.05  E-value: 1.50e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  83 DYFSMMFTPVALFVTWSIMEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRA 162
Cdd:PRK12667   81 DLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYRDRG 160
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 163 DANTAALQAVLYNRIGDIGFILAMAwFLTN----LNTWDLQQIFMLNPSDSNMPLIG-----LALAA-------TGKSAQ 226
Cdd:PRK12667  161 DAVEAAIKYALIGAVGTTLYFLALA-FLYAtfgtLNMADLSAKIRGLSFPLTGGLAGnpplaLGVALalalwafTIKAAI 239
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 227 FGLHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIRFY--------PLTENNKFIQSITLCLGAITTLFTAMCALTQND 297
Cdd:PRK12667  240 FPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLytifgispSLIDFRAALSPILIILGAVSAIIGALMMVVQKD 318
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 298 IKKIIAFSTSSQLGLMMVTIGINQPYL---AFLHICTHAFFKAMLFMCSGSIIHSLNdEQDIRKMGGLFKAMPFTTTALI 374
Cdd:PRK12667  319 VKRLLAYSTISHMGYIFMGIGIGTQLGlaaALFHIINHAIAKSLLFLASGVFIHAAG-TRDIDELAGLGRKMPIASFAFL 397
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 375 VGSLALTGMPFLTGFYSKDLIIEAAnTSYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFPTLVSINENN----PLL 450
Cdd:PRK12667  398 IGALSLVGIPPLNGFFSKLLLFNAL-LESGFYLPALVLLIASAISLVGYFRAWYSLFFGKPKSGEEVEHKESPsmsvVIL 476
                         410       420
                  ....*....|....*....|....*...
gi 1736209022 451 INSIKRLLIG--SLFAGYIISNNIPPTT 476
Cdd:PRK12667  477 VLALAVLILGilALFLPEILDSLIEPAA 504
PRK08375 PRK08375
putative monovalent cation/H+ antiporter subunit D; Reviewed
76-435 9.97e-39

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236251 [Multi-domain]  Cd Length: 487  Bit Score: 148.87  E-value: 9.97e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  76 LSLSFKMDYFSMMFTPVALFVTWsimeFSMWY-MHSDPNINKFFKYLLLFLITMLI--LVTANnLFQLFIGWEGVGIMSF 152
Cdd:PRK08375   69 IGIELRADSLSALFLLVTSILAI----AALLYaIGYGEHRQTRFYALFLLLLAGLLgaLLTAD-LFNLFVFLEIMSLSSY 143
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 153 LLIGWwYGRADANTAALQAVLYNRIGDIGFILAMA--WFLT-NLNTWDLQQIFMLNPS-DSNMPLIGLALAAtgKSAQFG 228
Cdd:PRK08375  144 ALVAM-GGDRRALAAARKYLIVGLIGSTFLLIGVGllYGVTgTLNMADLAGALAENPTvVTAFGFVLLALAL--KAAVFP 220
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 229 LHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFY-----PLTENNKFIQSITLCLGAITTLFTAMCALTQNDIKKIIA 303
Cdd:PRK08375  221 LHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLA 300
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 304 FSTSSQLGLMMVTIGINQP---YLAFLHICTHAFFKAMLFMCSGSIIHSLNdEQDIRKMGGLFKAMPFTTTALIVGSLAL 380
Cdd:PRK08375  301 YSTVSQMGYILLGLALLTPlalAAGLLHLLHHALMKGALFLAAGAIEVTYG-TRRLSELSGLGRRMPLTAAAFAVASLSL 379
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1736209022 381 TGMPFLTGFYSKDLIIEAANtsYTNAWALLMTLIATSF-TAIYSTRIIFFALLGQP 435
Cdd:PRK08375  380 IGVPPTSGFVSKWYLVVGAV--EAGQWLVLAVLLASSLlALLYFLRIWYRAFFGPP 433
PRK08168 PRK08168
NADH-quinone oxidoreductase subunit L;
98-381 3.89e-34

NADH-quinone oxidoreductase subunit L;


Pssm-ID: 236171 [Multi-domain]  Cd Length: 516  Bit Score: 136.37  E-value: 3.89e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  98 WSIMEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRI 177
Cdd:PRK08168   83 WVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRPFARLAAHKKFIADRL 162
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 178 GDIGFILAMAWFLTNLNTWDLQQI-FMLNPSDSNMPLIG----LALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTM 252
Cdd:PRK08168  163 AELLLLAAAALAYLEVGSLSLSALwAHLAAQGASPSLQAaallLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVV 242
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 253 VVAGiFLLIRFYPLTENNKFIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTH 332
Cdd:PRK08168  243 NLGG-FVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGLYELALLHLVAH 321
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1736209022 333 AFFKAMLFMCSGSII-----HSLNDEQDIRKMGGLFKAmPFTTTALIVGSLALT 381
Cdd:PRK08168  322 SLYKAHAFLSASEAVrdtrlRRLQGPQSAAGVVSLLLA-PLLSAALVLLLQSLL 374
PRK12668 PRK12668
Na(+)/H(+) antiporter subunit D;
132-436 2.89e-33

Na(+)/H(+) antiporter subunit D;


Pssm-ID: 237168 [Multi-domain]  Cd Length: 581  Bit Score: 134.64  E-value: 2.89e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 132 VTANNLFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPSDSNM 211
Cdd:PRK12668  110 VFAGDLLTLFVFWELMAFTSTFLV-WARGTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIAGLGGTAAWL 188
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 212 PLIGLALaatgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTEnnkfiqsITLCLGAITTLFTAMC 291
Cdd:PRK12668  189 ILIGFGV----NAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTE-------LLIYIGAAMAVYGVFF 257
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 292 ALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYL---AFLHICTHAFFKAMLFMCSGSIIHSLNdEQDIRKMGGLFKAMPF 368
Cdd:PRK12668  258 ALLENDLRRLLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYRTG-TEKLTELGGLYRSMPL 336
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1736209022 369 TTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYtNAWALLMTLIATSFTAIYST-RIIFFALLGQPR 436
Cdd:PRK12668  337 TALFCLVGALSISAFPLFSGFVSKSMIISAAGEDH-YVWVWLLLLLASAGTFLHFGiKLPYFAFFGGDS 404
PRK08376 PRK08376
putative monovalent cation/H+ antiporter subunit D; Reviewed
80-435 9.31e-33

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236252 [Multi-domain]  Cd Length: 521  Bit Score: 132.14  E-value: 9.31e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  80 FKMDYFSMMFTPVALFVTWSIMEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWY 159
Cdd:PRK08376   86 WEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRN 165
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 160 GRADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDLQQI-FMLNPSDSNMPLIGLALAATG---KSAQFGLHPWLPS 235
Cdd:PRK08376  166 DTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLaVKMSENPTVVAKIALALFIAGlamKSGAVPVHMWLPD 245
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 236 AM-EGPTPVSALLHSSTmvVAGIFLLIR----FYPLTENNKFIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQL 310
Cdd:PRK08376  246 AYpAAPSSISAMLLVIK--QAGLYALARvlfsIYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQI 323
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 311 GLMMVTIGINQPYL---------------AFLHICTHAFFKAMLFMCSGSIIHSLNdEQDIRKMGGLFKAMPFTTTALIV 375
Cdd:PRK08376  324 GYMLLGLGVGLAALgdpamasygeialagGIYHIVNHALYKALLFLTAGAVIYETG-TRNLNELGGLARTMPKTTIAFLI 402
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 376 GSLALTGMPFLTGFYSKDLIIEAanTSYTNAWALLMTLIATSFTAIYSTRIIFFALLGQP 435
Cdd:PRK08376  403 GAAAIVGLPPFNGFASKWLIYES--SALFNPILGVIAMIGSVLTLASFVKVFHTAFFGPP 460
NuoM COG1008
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ...
71-436 1.05e-32

NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440632 [Multi-domain]  Cd Length: 488  Bit Score: 131.74  E-value: 1.05e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  71 IQTLKLSLSFKMDYFSMMFTPVALFVTWSIMEFSMWYMHSDPninKFFKYLLLFLITMLILV-TANNLFQLFIGWEGVGI 149
Cdd:COG1008    69 IPSLGISYHLGVDGISLPLVLLTALLTPLAILASWNEIKKRP---KLYYALLLLLEAGMIGVfLALDLFLFYVFWELMLI 145
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 150 MSFLLIGWWyGRADANTAALQAVLYNRIGDIGFILAMAW--FLTNLNTWDLQQIFMLN-PSDSNMPLIGLALAATG-KSA 225
Cdd:COG1008   146 PMYFLIGIW-GGERRIYAAIKFFLYTLAGSLLMLVAILAlyFLAGALTFDIAELAAAPlPLTAQLLLFLAFFIAFAvKVP 224
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 226 QFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRF-YPLT-ENNKFIQSITLCLGAITTLFTAMCALTQNDIKKII 302
Cdd:COG1008   225 MFPFHTWLPDAhVEAPTAGSVLL-AGVLLKMGGYGLLRFaLPLFpEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLI 303
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 303 AFSTSSQLGLMMV------TIGINQpylAFLHICTHAFFKAMLFMCSGSIIHSLNDeQDIRKMGGLFKAMPFTTTALIVG 376
Cdd:COG1008   304 AYSSVSHMGFVLLgifalnPLGLQG---AVLQMVSHGLITAALFLLVGVLYDRTHT-RDIADLGGLAKRMPVLAALFLLA 379
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 377 SLALTGMPFLTGFYSKDLIIEAANTSYTnAWALLMTLiATSFTAIYSTRIIFFALLGQPR 436
Cdd:COG1008   380 ALASLGLPGTSGFVGEFLVLLGAFQVNP-WLAILAAL-GLILTAAYLLWMYQRVFFGPLK 437
PRK07234 PRK07234
putative monovalent cation/H+ antiporter subunit D; Reviewed
117-475 2.66e-29

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 235978 [Multi-domain]  Cd Length: 470  Bit Score: 121.21  E-value: 2.66e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 117 FFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGwwYGRAD-ANTAALQAVLYNRIGDIGFILAMAWFLTNLNT 195
Cdd:PRK07234   96 FYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLVA--YPRTDrAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGT 173
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 196 WDLQQIfmlnpsdSNMPLIGLALAATG---KSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKF 272
Cdd:PRK07234  174 FAFSGL-------ATADPEAFALIALGllvKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDL 246
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 273 IQSItlcLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINqpylAFLHIcTHAFFKAMLFMCSGsIIHSLND 352
Cdd:PRK07234  247 IVRI---FGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG----GLYAL-AHGLVKSTLFLCAG-ALPSRNF 317
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 353 EQDIRKMGGLFKAMPftttaLIVGSLALTGMPFLTGFYSKDLIIEAANTsytnaWALLMTLIATSFTAIYSTRIIFFALL 432
Cdd:PRK07234  318 TELISQMLGIGKWIP-----LTMASFSIAGFPLLAGFVSKVLTLKNLLP-----WQAIALNLAAVGTAASFWKFIFLPFS 387
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 1736209022 433 GQPRFPTLVSINENNPLLINSIKRLLIGSLFAGYIISNNIPPT 475
Cdd:PRK07234  388 ADDEDKKPLPGFWNAIALLLGGLFLANGVYTEAYTLGNILKAL 430
PRK06589 PRK06589
putative monovalent cation/H+ antiporter subunit D; Reviewed
76-468 6.77e-29

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 235835 [Multi-domain]  Cd Length: 489  Bit Score: 120.31  E-value: 6.77e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  76 LSLSFKMDYFSMMFTPVALFVTWSIMEFSMWYMHSDpNINKFFKYLLLFLITMLILVTAN---NLFQLFIGWEGVGIMSF 152
Cdd:PRK06589   75 YSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAIN-NIDSSSRFLFFFNLTILIGVLIAlssDLFTMFVCYELLTISTA 153
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 153 LLIGwwYGRADANTAALQAVLynrigDIGFILAMAWFL-------TNLNTWDLQQIFMLNPSDSNMPLIGLaLAATGKSA 225
Cdd:PRK06589  154 FLIG--HTRNNISLSGGYKYL-----KILMISALLLFLpaviliyTKTGNLDFVSGGLFSKNQSIILLLMF-IYGIAKTA 225
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 226 QFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQSIT-----LCLGAITTLFTA-MCALTQNDIK 299
Cdd:PRK06589  226 IFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFaefnwLIFIPIVSIFYSsLKALKTDNIK 305
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 300 KIIAFSTSSQLGLMMVTIGINQPY---LAFLHICTHAFFKAMLFMCSGSIIhSLNDEQDIRKMGGLFKAMPFTTTALIVG 376
Cdd:PRK06589  306 KILAYSTISQLSLALLSAFILTPKalgAAILHLVSHSFAKICLFYSMGSIY-SLKKEDQVDKLHGTSKSFPLISFIISIS 384
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 377 SLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTL---IATSFTAIYSTRIIFFALlgQPRFPTLVSINENNPLLINS 453
Cdd:PRK06589  385 SLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLvviASSILSALYLLKILSSIY--KPSLSENSFITKSLPYLMQI 462
                         410
                  ....*....|....*
gi 1736209022 454 IKRLLIGSLFAGYII 468
Cdd:PRK06589  463 SVITCCCALTLFYFI 477
PRK06521 PRK06521
hydrogenase 4 subunit B; Validated
123-436 4.05e-28

hydrogenase 4 subunit B; Validated


Pssm-ID: 235820 [Multi-domain]  Cd Length: 667  Bit Score: 119.61  E-value: 4.05e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 123 LFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDLQQIF 202
Cdd:PRK06521  121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMR 200
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 203 MLNPSdsnmPLIG-----LALAATG-KSAQFGLHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIR--FYPLTENNKFI 273
Cdd:PRK06521  201 AAHLS----PFWAslvflLALFGFGaKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRvvFDLLGAPGWWW 275
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 274 QSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGI-------NQPYLAFL-------HICTHAFFKAML 339
Cdd:PRK06521  276 GVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLGLamvfiayGMPLLAALaltaalyHLLNHALFKSLL 355
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 340 FMCSGSIIHSLNdEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAA-NTSYTNAWALLMT------ 412
Cdd:PRK06521  356 FLGAGAVLHATG-TRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQSLlSSPGLPQWGLKLAvpiaaa 434
                         330       340       350
                  ....*....|....*....|....*....|.
gi 1736209022 413 -------LIATSFTAIYStrIIFfalLGQPR 436
Cdd:PRK06521  435 mlaltaaLAAMCFVKFYG--ITF---LGRPR 460
PRK08667 PRK08667
hydrogenase membrane subunit; Validated
55-414 1.53e-27

hydrogenase membrane subunit; Validated


Pssm-ID: 236331 [Multi-domain]  Cd Length: 644  Bit Score: 117.52  E-value: 1.53e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  55 IHSGQELIISNWHWLTiqtlKLSLSFKMDYFSMMFTPVALFVTWSIMEFSMWY---MHSDPNINKFFKYLLLFLITMLIL 131
Cdd:PRK08667   52 LFTGNPLDIPLWGIAP----GLDITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSMLGV 127
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 132 VTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIgFILAMAWFLTNLN-TWDLQQIFMLNPSDSn 210
Cdd:PRK08667  128 VASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTV-FLMLGIIVLFIQTgSFELSPLGASAGILS- 205
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 211 MPLIGLALAATGKSAQFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIRFY-PLTENNKFIQSITLCLGAITTLFT 288
Cdd:PRK08667  206 LVFLLLFLGFGIKAGIIPFHKWLPYAHPAsPSNVSALM-SGVMLKVAVYGLVRFLmDVLSPELWWGVLILLAGSISALLG 284
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 289 AMCALTQNDIKKIIAFSTSSQLGLMMVTIGI-------NQPYLAFL-------HICTHAFFKAMLFMCSGSIIHSLNDeQ 354
Cdd:PRK08667  285 VIYALKEHDLKGLLAYSSIENIGIILMGIGLyvifgvyGLDTLALLalggalfHSLNHALFKSLLFLTAGSVVHATGT-R 363
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 355 DIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLI 414
Cdd:PRK08667  364 NIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFQSFSVADPLIKILL 423
PRK08668 PRK08668
NADH dehydrogenase subunit M; Validated
69-399 7.51e-27

NADH dehydrogenase subunit M; Validated


Pssm-ID: 236332 [Multi-domain]  Cd Length: 610  Bit Score: 115.48  E-value: 7.51e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  69 LTIQTLKLSLSFKMDYFSMMFTPVALFVTWSIMEFSM-WYMHSDPNINKFfkyLLLFLITMLILVTANNLFQLFIGWEGV 147
Cdd:PRK08668   54 LTLFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVsEKTKNDAYFNMF---ALMSLAGVLGVFLANDLLTLYIFWEIM 130
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 148 GIMSFLLIgwWYGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDLQQI--FMLNPSDSNMPLIG---LALAATG 222
Cdd:PRK08668  131 TFSSFMMV--PMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADIsqGLINDTSTGFALIVflfLLAFGVA 208
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 223 KSAQFGLHPWLPSAM-EGPTPVSALLhSSTMVVAGIF-LLIRFYPLTENNKFIQSITL-----------CLGAITTLFTA 289
Cdd:PRK08668  209 KAGIFPLHVWAPDAYsEAPQSFSAVL-SGQLSKLGAYgFLLVLYVLPGTKLFSEFGTYrgvplfnyilaWLGNISIIVGT 287
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 290 MCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYL---AFLHICTHAFFKAMLFMCSGSIIHSlNDEQDIRKMGGLFKAM 366
Cdd:PRK08668  288 LMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGfagGLFHVFNHALFKGLFFLIFAAVIYR-TGTTKISEMGGLIEKM 366
                         330       340       350
                  ....*....|....*....|....*....|...
gi 1736209022 367 PFTTTALIVGSLALTGMPFLTGFYSKDLIIEAA 399
Cdd:PRK08668  367 PFTFAMYLVAIISLAGIPPMSGFASKWLIFEAL 399
PRK06458 PRK06458
hydrogenase 4 subunit F; Validated
80-460 8.68e-27

hydrogenase 4 subunit F; Validated


Pssm-ID: 235805 [Multi-domain]  Cd Length: 490  Bit Score: 114.26  E-value: 8.68e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  80 FKMDYFSMMFTPVALFVTWSIMEFSMWYMH--------SDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMS 151
Cdd:PRK06458   65 FFIDDLNVFFLALIGVVGFLTSLYSIGYMRhevehgelSPVTLRLYYGMYQLFLFTMLLALTSNNLGLMWVAIEATTLSS 144
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 152 FLLIGWwYGRADANTAALQAVLynrIGDIGfiLAMAWFLTNLNTWDLQQI------------FMLNPSDSNMPLIGLA-- 217
Cdd:PRK06458  145 ALLVGI-YRTRASLEAAWKYII---ICSVG--VAFALFGTILVYANAATVmgdgemailwteLLKHASLLDPTLMKLAfv 218
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 218 LAATG---KSAQFGLHPWLPSA-MEGPTPVSALLHSSTMVVAgIFLLIRFYPLTE---NNKFIQSITLCLGAITTLFTAM 290
Cdd:PRK06458  219 FLLIGfgtKVGLFPMHAWLPDAhSEAPSPVSALLSGVLLNVA-LYAVLRYYILIDaaiGSDFPGRLLLIFGLLSVLVAAF 297
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 291 CALTQNDIKKIIAFSTSSQLGLMMVTIGINQPY---LAFLHICTHAFFKAMLFMCSGSIIHSLnDEQDIRKMGGLFKAMP 367
Cdd:PRK06458  298 FLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLgifAALLHMLNHSLTKSAIFFASGNVLQKY-GTRDINVIRGLLKVSP 376
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 368 FTTTALIVGSLALTGMPFLTGFYSKDLIIEAA-NTSYTNAWALLMTLIATSFTAIYS--TRIIFfallGQPRFPT---LV 441
Cdd:PRK06458  377 LTGWGLMLGALAIAGMPPFGVFISEFLILTAGlARGPLLIAILLLLLLTLAFAALVRrvAGMVF----GEPPEAVnrgDL 452
                         410
                  ....*....|....*....
gi 1736209022 442 SINENNPLLINSIKRLLIG 460
Cdd:PRK06458  453 GWLTTSPMFVHLVLVLVLG 471
PRK08377 PRK08377
NADH dehydrogenase subunit N; Validated
85-427 1.75e-26

NADH dehydrogenase subunit N; Validated


Pssm-ID: 181406 [Multi-domain]  Cd Length: 494  Bit Score: 113.32  E-value: 1.75e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  85 FSMMFTPVALFVTWSIMEFSMWYMHSDPNInkffKYLLLFLITMLI---LVTANNLFQLFIGWEGVGIMSFLLIGWwYGR 161
Cdd:PRK08377   79 FAALFVLIIAIVSFIMSIFSLKAVEVEPID----KYAMLFLLLMLGatgMIATGDIFNLFVFMEITAITAYALTAY-NKT 153
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 162 ADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDLQQIFML-NPSDSNMPLIGLALAATG---KSAQFGLHPWLPSAM 237
Cdd:PRK08377  154 GEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLaGTIDPTVAQVGLALLIFGlavEAELFPLNAWAPDAY 233
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 238 EG-PTPVSALLhSSTMVVAGIFLLIRFYPLTENNKFIQSIT---LCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLM 313
Cdd:PRK08377  234 QAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANGWSSVLklvIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMI 312
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 314 MVTIGINQPY---LAFLHICTHAFFKAMLFMCSGSIIHSLNDEQdIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFY 390
Cdd:PRK08377  313 ALALALGTQAgvdAGVFHMINHAIVKALLFLAVGYVGITLGGTE-IEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFW 391
                         330       340       350
                  ....*....|....*....|....*....|....*...
gi 1736209022 391 SKDLIIEAA-NTSYTnaWALLMTLIATSFTAIYSTRII 427
Cdd:PRK08377  392 SKFRIILAGlSAGYT--WPVALVLGASVVEAVYYFRLI 427
ND5 MTH00063
NADH dehydrogenase subunit 5; Provisional
118-429 2.74e-23

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214414 [Multi-domain]  Cd Length: 522  Bit Score: 103.80  E-value: 2.74e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 118 FKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAVLYNRIGDIG--FILAMAWFLTNLNT 195
Cdd:MTH00063   79 NKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLI-LFYDNFLSLRASVVTLVSSRFGDVClfLLIGLSCWGGSGSF 157
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 196 WDLQQIFmlnpsdsnmpLIGLAlaatgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIqS 275
Cdd:MTH00063  158 LCCLFFF----------LIVFT-----KSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLS-I 221
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 276 ITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQD 355
Cdd:MTH00063  222 FFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQS 301
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1736209022 356 IR-----KMGGLFkaMPFTTTALIVGslaLTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTLIATSFTAIYSTRIIFF 429
Cdd:MTH00063  302 SNcvyssILYGSW--NLFYLFLLVLG---LSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRLCLI 375
PRK12663 PRK12663
Na+/H+ antiporter subunit D;
78-465 7.90e-23

Na+/H+ antiporter subunit D;


Pssm-ID: 237163 [Multi-domain]  Cd Length: 497  Bit Score: 101.95  E-value: 7.90e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  78 LSFKMDYFSMMFTPVALFVTWSIMEFSMWYMHSDPNiNKFFKYLLLFLITMLI--LVTANnLFQLFIGWEGVGIMSFLLI 155
Cdd:PRK12663   71 IQFTGDSLSALMVTTASFVATAIMAYGFGDIEHSGR-RYGFPPFILLLMAGVIgsFLTGD-LFNLYVWFEVMLIASFVLI 148
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 156 GWWyGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDLQQIFM-LNPSDSNMPLIGLA----LAATGKSAQFGLH 230
Cdd:PRK12663  149 TLG-QEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMrLNDMGDTATLTTIAllflLAFGMKAALFPFM 227
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 231 pWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPL--TENNKFIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSS 308
Cdd:PRK12663  228 -WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLlfPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVIS 306
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 309 QLGLMMVTIGINQP--------YLAFLHIcthafFKAMLFMCSGSIIHsLNDEQDIRKMGGLFKAMPFTTTALIVGSLAL 380
Cdd:PRK12663  307 SIGFILLGLALGTPagingaifYLVHDMV-----VKTALFLIAGSLVR-LTGYRSLQYLGGLYRKEPLFGALFLILIFAI 380
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 381 TGMPFLTGFYSKDLIIEAANTSytNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFPTLVSINENNPLLINSIKRLLIG 460
Cdd:PRK12663  381 GGLPPFSGFWGKVLLVQGALDN--GAYILLALMLITSLITMYSLFRIFFLAYWGDKDGEEVNFKPIPLYRKLPLSILAVV 458

                  ....*
gi 1736209022 461 SLFAG 465
Cdd:PRK12663  459 VIAMG 463
PRK05846 PRK05846
NADH:ubiquinone oxidoreductase subunit M; Reviewed
71-423 1.16e-22

NADH:ubiquinone oxidoreductase subunit M; Reviewed


Pssm-ID: 235622 [Multi-domain]  Cd Length: 497  Bit Score: 101.43  E-value: 1.16e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  71 IQTLKLSLSFKMDYFSMMF-------TPVALFVTWsimefsmwymHSDPNINKFFKYLLLFLITMLILV-TANNLFQLFI 142
Cdd:PRK05846   69 IPRFGISYHLGVDGISLLLvvltallTPLAVLASW----------EEIKKRVKFYMAALLWLEGGVIGVfAALDLLLFYV 138
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 143 GWEGVGIMSFLLIGWWyGRADANTAALQAVLYNRIGDIGF---ILAMAWFLTN-LNTWDLQQIFMLNPSDSNMPLIGLA- 217
Cdd:PRK05846  139 FFEAMLIPMYFLIGVW-GGKNRIYAATKFFLYTLLGSLLMlvaIIYLVVVYYNaTGTFDIADLLNLPLPPGVQYWLFLAf 217
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 218 LAATG-KSAQFGLHPWLPSAM-EGPTPVSALLhsstmvvAGIFL------LIRF-YPLTEN-NKFIQSITLCLGAITTLF 287
Cdd:PRK05846  218 FIAFAvKMPMFPLHTWLPDAHvQAPTAGSVLL-------AGILLkmgaygLLRFsLPLFPDaSHEFAPIIITLGVIAIIY 290
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 288 TAMCALTQNDIKKIIAFSTSSQLGLmmVTIGI---NQPYL--AFLHICTHAFFKAMLFMCSGSIIHSLNDEqDIRKMGGL 362
Cdd:PRK05846  291 GALVALAQTDIKKLIAYSSISHMGF--VTLGIfagNQLGIqgAIFQMISHGLSSAALFLLVGVLYDRLHTR-DIADYGGL 367
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1736209022 363 FKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTnawalLMTLIATS---FTAIYS 423
Cdd:PRK05846  368 AKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNP-----VIAFIATTgliLAAVYS 426
NuoN COG1007
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ...
79-399 3.10e-21

NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440631 [Multi-domain]  Cd Length: 473  Bit Score: 97.11  E-value: 3.10e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  79 SFKMDYFSMMFTPVALFVTWSIMEFSMWYMhSDPNINKFFKYLLLFLIT--MLILVTANNLFQLFIGWEGVGIMSFLLIG 156
Cdd:COG1007    65 MFVVDGFALFFKLLILLAALLVLLLSRDYL-ERRGLLRGEFYALLLFATlgMMLMASANDLLTLFLGLELLSLSLYVLVA 143
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 157 WWYGRADANTAALQAVLYNRIGDIGFILAMAWFL-----TNLNtwDLQQIFMLNPSDSNMPLIGLALAATG---KSAQFG 228
Cdd:COG1007   144 FRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYgatgsLNLA--GIAAALAAGGANSPLLLLGLVLVLAGlafKLSAVP 221
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 229 LHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIRF--YPLTENNKFIQSITLCLGAITTLFTAMCALTQNDIKKIIAFS 305
Cdd:COG1007   222 FHMWTPDVYEGaPTPVTAFL-ATAPKIAAFAALLRLlvEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYS 300
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 306 TSSQLGLMMVTIGINQP---YLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTG 382
Cdd:COG1007   301 SIAHAGYLLLGLAAGTPlgvSAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAG 380
                         330
                  ....*....|....*..
gi 1736209022 383 MPFLTGFYSKDLIIEAA 399
Cdd:COG1007   381 IPPTAGFFGKFYVFSAA 397
PRK12662 PRK12662
putative monovalent cation/H+ antiporter subunit D; Reviewed
114-427 3.64e-20

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 183662 [Multi-domain]  Cd Length: 492  Bit Score: 94.03  E-value: 3.64e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 114 INKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRAdANTAALQAVLYNRIG------DIGFILAMA 187
Cdd:PRK12662  109 IPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDKK-ALVAAFEYLIIGTIGatfyliGIGFLYAIT 187
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 188 wflTNLNTWDLQQIFMLNPsDSNMPLIGLALAATG---KSAQFGLHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIR- 262
Cdd:PRK12662  188 ---GTLNMGDMFLIIQDLP-TNRAIQIGVLFIMVGlfiKAALFPFHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRi 262
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 263 FYPLTENNKFI-----QSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPY---LAFLHICTHAF 334
Cdd:PRK12662  263 VYDVFKANFVFttlpfNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSI 342
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 335 FKAMLFMCSGSIIHSLnDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSytNAWALLMTLI 414
Cdd:PRK12662  343 VKSALFMVSGSISYHF-GTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKS--NAWIGLVVLL 419
                         330
                  ....*....|....
gi 1736209022 415 ATSFTA-IYSTRII 427
Cdd:PRK12662  420 VGSGLSvIYVWKIV 433
PRK07691 PRK07691
putative monovalent cation/H+ antiporter subunit D; Reviewed
71-399 1.44e-19

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 181085 [Multi-domain]  Cd Length: 496  Bit Score: 91.93  E-value: 1.44e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  71 IQTLKL-------SLSFKMDYFSMMFTPVALFVTWSIMEFSMWYMHSDPNINkFFKYLLLFLITMLI-LVTANNLFQLFI 142
Cdd:PRK07691   57 IQTLELgnwkapfGIVFVADMFAALLVLTSSIITFLVILYSFQTIGIERERY-YYYPSVLFMLAGVNgAFLTGDIFNLFV 135
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 143 GWEGVGIMSFLLIGWWyGRADANTAALQAVLYNRIGDIGFILAMAWFLT---NLNTWDL-QQIFMLNPSDSNM----PLI 214
Cdd:PRK07691  136 FFEVMLMASYVLIVIG-GTKIQLRESIKYVLINVVSSAFFVVAVAILYSvvgTLNMADIsVKIAELSAGQTGLitvvAIL 214
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 215 GLALAATgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPL--TENNKFIQSITLCLGAITTLFTAMCA 292
Cdd:PRK07691  215 FLFVFAT-KAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLffSHDTSFTHYLILILALLTIIFGVIGA 293
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 293 LTQNDIKKIIAFSTSSQLGLMMVTIGINQPYL---AFLHICTHAFFKAMLFMCSGSIIHsLNDEQDIRKMGGLFKAMPFT 369
Cdd:PRK07691  294 VAYFDIKKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKRYPVL 372
                         330       340       350
                  ....*....|....*....|....*....|
gi 1736209022 370 TTALIVGSLALTGMPFLTGFYSKDLIIEAA 399
Cdd:PRK07691  373 GWMFFIAALSLAGIPPLSGFYGKFFIVEGT 402
PRK12561 PRK12561
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
62-391 2.01e-18

NAD(P)H-quinone oxidoreductase subunit 4; Provisional


Pssm-ID: 237137 [Multi-domain]  Cd Length: 504  Bit Score: 88.55  E-value: 2.01e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  62 IISNWHWLTiqTLKLSLSFKMDYFSMMFTPVALFVTwSIMEFSMWYMHSDPninKFFKYLLLFLITMLILV-TANNLFQL 140
Cdd:PRK12561   39 LVERYAWLP--QIGLEWSLGVDGLSMPLVLLSGLIT-TLSIFASWKVTRKP---RLFYFLMLVLYSAQIGVfLAQDLLLF 112
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 141 FIGWEGVGIMSFLLIGWWYGRaDANTAALQAVLYNRIGDIgFIL----AMAWFLTNLnTWDLQQIFMLNPSDSNMPLI-- 214
Cdd:PRK12561  113 FLMWELELVPVYLLISIWGGQ-KRLYAATKFILYTALASI-FILvaglALALSGDTF-TFDLAELGAKSYPLALELLLya 189
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 215 GLALAATGKSAQFGLHPWLPSAM-EGPTPVSallhsstMVVAGIFL------LIRF--YPLTENNKFIQSITLCLGAITT 285
Cdd:PRK12561  190 GFLIAFGVKLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLkmggyaLIRFnvQMLPDAHVYFAPALAILGVVNI 262
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 286 LFTAMCALTQNDIKKIIAFSTSSQLGLMMVTI------GINQpylAFLHICTHAFFKAMLFMCSGSI---IHSLNdeqdI 356
Cdd:PRK12561  263 IYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIaaftdlGISG---AMLQMISHGLIAAALFFLTGVTyerTHTLS----I 335
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|
gi 1736209022 357 RKMGGLFKAMP-----FTTTALivGSLALTGMpflTGFYS 391
Cdd:PRK12561  336 PNMGGLAKVMPktfalFTASSM--ASLALPGM---SGFVS 370
PRK08601 PRK08601
NADH dehydrogenase subunit 5; Validated
94-347 4.17e-18

NADH dehydrogenase subunit 5; Validated


Pssm-ID: 236310 [Multi-domain]  Cd Length: 509  Bit Score: 87.78  E-value: 4.17e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  94 LFVTWSIMEFSMWYMHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVL 173
Cdd:PRK08601   82 LTLGFIIQRFSVRYLLGDRSYRKYFALFTFTTGFASLAWLSGDLRLMALCWGATLLGLTLLIGLNKGWKVAREAAKISGM 161
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 174 YNRIGDIGFILAMAWFLTNLNTWDLQQIFmlnpSDSNMPLIG----------LALAATGKSAQFGLHPWLPSAMEGPTPV 243
Cdd:PRK08601  162 LFLISWLALALAIVWLFIATGEWQLTSVL----SNENLAQLGtwektginllLILAVMIPAAQWPFQRWLIESAVAPTPV 237
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 244 SALLHSStMVVAGIFLLIRFYPLTeNNKFIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPY 323
Cdd:PRK08601  238 SAIMHAG-LVNAGGIMLTRFSPLF-HDDIAQILLLIFASISVLIGTGISLVQVDYKRQLVGSTMAQMGFMLVQCALGAYS 315
                         250       260
                  ....*....|....*....|....
gi 1736209022 324 LAFLHICTHAFFKAMLFMCSGSII 347
Cdd:PRK08601  316 AAIIHLILHGLFKATLFLQSGSAV 339
PRK08676 PRK08676
hydrogenase membrane subunit; Validated
213-422 7.38e-17

hydrogenase membrane subunit; Validated


Pssm-ID: 181537 [Multi-domain]  Cd Length: 485  Bit Score: 83.65  E-value: 7.38e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 213 LIGLAlaatGKSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRFYPLTENNKF---IQSITLCLGAITTLFT 288
Cdd:PRK08676  213 FIGFL----AKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGAaeqFSNVLIGLGIFSIAVA 287
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 289 AMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQP---YLAFLHICTHAFFKAMLFMCSGsIIHSLNDEQDIRKMGGLFKA 365
Cdd:PRK08676  288 AFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPlalFWMLFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRL 366
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1736209022 366 MPFTTTALIVGSLALTGMPFLTGFYSK-DLIIEAANTS-YTNAWALLMTLIATSFTAIY 422
Cdd:PRK08676  367 QPVAAWGVILGSAAIIGMPPFPLFLSKfFILLQLGGISvWLVLAVLLLLLLAASSFAIF 425
PRK05777 PRK05777
NADH-quinone oxidoreductase subunit NuoN;
79-427 2.03e-15

NADH-quinone oxidoreductase subunit NuoN;


Pssm-ID: 235603 [Multi-domain]  Cd Length: 476  Bit Score: 79.09  E-value: 2.03e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  79 SFKMDYFSMMFTPVALFVTWsimeFSMWYMHSDPNINKFFKYLLLFLIT---MLILVTANNLFQLFIGWEGVGIMSFLLI 155
Cdd:PRK05777   68 MLVVDGFALFLKGLILLASL----LALLLARPYLEDRGRGEFYLLVLFAllgMMVMVSANDLLTLFLGLELLSLPLYALA 143
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 156 GWWYGRADANTAALQavlYNRIGDI--GFIL---AMAWFLT-NLNTWDLQQIFMLNPSDSNMPLIGLALAATG---KSAQ 226
Cdd:PRK05777  144 ALRRDRRRSLEAAIK---YFVLGALasGFLLygmSLLYGATgSLSFAGIAKALADGSGNSLLLLFGLVFLLVGlafKLSA 220
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 227 FGLHPWLPSAMEG-PTPVSALLHSSTMVVA-GIFLLIRFYPLTENNKFIQSITLCLGAITTLFTAMCALTQNDIKKIIAF 304
Cdd:PRK05777  221 VPFHMWTPDVYEGaPTPVTAFLATAPKIAAfAVLLRLLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAY 300
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 305 STSSQLGLMMV--TIGINQPYLA-FLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALT 381
Cdd:PRK05777  301 SSIAHAGYLLVglAAGTAEGYSAvLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLA 380
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*.
gi 1736209022 382 GMPFLTGFYSKDLIIEAANTSYTNAWALLMtLIATSFTAIYSTRII 427
Cdd:PRK05777  381 GIPPTAGFWGKFYVFEAAVEAGLWWLAVIG-VLNSAIGAFYYLRVI 425
PRK12665 PRK12665
putative monovalent cation/H+ antiporter subunit D; Reviewed
124-422 1.68e-14

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237165 [Multi-domain]  Cd Length: 521  Bit Score: 76.16  E-value: 1.68e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 124 FLITMLILVT-------ANNLFQLFIGWEGVGIMSFLLI--GwwyGRADANTAALQAVLYNRIGDIGFI--LAMAWFLT- 191
Cdd:PRK12665  113 FLPTYLILVAgvsnaflAGDLFNLYVGFEILLVASYVLLtlG---ATAARVRAGVTYVMVSMVSSLLFLigIALVYAATg 189
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 192 NLNTWDLQQIFMLNPSDSNMPLIGLALAATG-KSAQFGLHPWLP-SAMEGPTPVSA----LLhssTMVvaGIFLLIRFYP 265
Cdd:PRK12665  190 TLNMADLAVRLDELPSGTRTALFAVLLVAFGiKAAVFPLSFWLPdSYPTAPAPVTAvfagLL---TKV--GVYAIIRTHT 264
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 266 LTENNKFIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPY---LAFLHICTHAFFKAMLFMC 342
Cdd:PRK12665  265 LLFPGGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAglsGAIYYVAHHITVQTTLFLV 344
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 343 SGsIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEA-ANTSYTNAWALLMTLIATSFTAI 421
Cdd:PRK12665  345 VG-LIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLEAgAEDGTWLAWALVAGGVVTSLLTL 423

                  .
gi 1736209022 422 Y 422
Cdd:PRK12665  424 Y 424
PRK06473 PRK06473
NADH-quinone oxidoreductase subunit M;
110-422 2.18e-14

NADH-quinone oxidoreductase subunit M;


Pssm-ID: 235810 [Multi-domain]  Cd Length: 500  Bit Score: 75.89  E-value: 2.18e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 110 SDPNIN--KFFKYLLLFLITMLI-LVTANNLFQLFIGWEGVGIMSFLLIGWWyGRADANTAALQAVLYNRIGDI----GF 182
Cdd:PRK06473   99 SDESIQrpRFYYSLLLLLNAGVSgAFLAQDLLLFFLFYELELIPLYLLIAIW-GGQRRGYAATKFLLYTAISGIlilvSF 177
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 183 iLAMAWfLTNLNTWDLQQIFMLN-PSDSNMPLIGLALAATG-KSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFL 259
Cdd:PRK06473  178 -LGLVW-LSGASSFDYEPLRSHTlPLSTQLLLLAPILVGFGiKIPLVPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYG 254
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 260 LIRF--YPLTENNKFIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPY---LAFLHICTHAF 334
Cdd:PRK06473  255 LLRFgvGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPLsilAAVFQMISHGL 334
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 335 FKAMLFMCSGsIIHSLNDEQDIRKMGGLF---KAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYtnAWALLM 411
Cdd:PRK06473  335 ISALLFLLVG-VVYKKTGSRDVDVLRGLLnpeRGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIF--PVQTLL 411
                         330
                  ....*....|.
gi 1736209022 412 TLIATSFTAIY 422
Cdd:PRK06473  412 CMIGTGLTAVY 422
PRK08042 PRK08042
formate hydrogenlyase subunit 3; Reviewed
229-398 4.01e-14

formate hydrogenlyase subunit 3; Reviewed


Pssm-ID: 181206 [Multi-domain]  Cd Length: 593  Bit Score: 75.25  E-value: 4.01e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 229 LHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIQSIT-LCLGAITTLFTAMCALTQNDIKKIIAFSTS 307
Cdd:PRK08042  199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGVAlLVLGMITAFVGGLYALMEHNIQRLLAYHTL 278
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 308 SQLGLMMVTIG-------INQPYLAFL-------HICTHAFFKAMLFMCSGSIIHSlNDEQDIRKMGGLFKAMPFTTTAL 373
Cdd:PRK08042  279 ENIGIILLGLGagvtgiaLEQPALIALglvgglyHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPVISIAM 357
                         170       180
                  ....*....|....*....|....*
gi 1736209022 374 IVGSLALTGMPFLTGFYSKDLIIEA 398
Cdd:PRK08042  358 LVGLMAMAALPPLNGFAGEWVIYQS 382
Proton_antipo_N pfam00662
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ...
68-118 1.10e-13

NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.


Pssm-ID: 459895 [Multi-domain]  Cd Length: 51  Bit Score: 65.53  E-value: 1.10e-13
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1736209022  68 WLTIQTLKLSLSFKMDYFSMMFTPVALFVTWSIMEFSMWYMHSDPNINKFF 118
Cdd:pfam00662   1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
PRK06277 PRK06277
energy conserving hydrogenase EhbF;
121-428 1.84e-12

energy conserving hydrogenase EhbF;


Pssm-ID: 235767 [Multi-domain]  Cd Length: 478  Bit Score: 69.68  E-value: 1.84e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 121 LLLFLITMLI-----LVTANNLFQLFIGWEGVGIMSFLLIgWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLT---N 192
Cdd:PRK06277  101 LYVFLMLMGLasvsaIVLADDIFNLYVFFEIAAIVQVGLV-IASGTEEAYKAALKYMILGNVAGSILLLGIGFLLAstgT 179
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 193 LNTWDLQQIFMLNPSdSNMPLIGLALAATGKSAQFGLHPW--LPSAM--EGPTPVSALLHSS---TMVVAGIFLLIRFYP 265
Cdd:PRK06277  180 LNITDIHNALLVNPT-SPVIYGGLLLLIFGLLYGSGLPPFhtIKSDIyaKAKPFGSALLQTFskfVLVALMLVIFKLFGG 258
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 266 LTENNKFiQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPY---LAFLHICTHAFFKAMLFMC 342
Cdd:PRK06277  259 LSYFPSA-QGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLgivAGIFHAINHVIYKSALFLG 337
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 343 SGsIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLMTL--IATSFTA 420
Cdd:PRK06277  338 AG-IVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIvsIGTFVSM 416

                  ....*...
gi 1736209022 421 IYSTRIIF 428
Cdd:PRK06277  417 MKAFYLIY 424
PRK07363 PRK07363
NADH-quinone oxidoreductase subunit M;
71-422 4.35e-11

NADH-quinone oxidoreductase subunit M;


Pssm-ID: 180945 [Multi-domain]  Cd Length: 501  Bit Score: 65.50  E-value: 4.35e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  71 IQTLKLSLSFKMDYFSMMFTPVALFVTWsIMEFSMWYMHSDPNInkFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIM 150
Cdd:PRK07363   66 NEPLGLSYSLGVDGLSLPLLVLNSLLTW-IAIYSIGENTERPRL--YYSLILLINGGIAGALLAQNLLLFFLFYELELIP 142
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 151 SFLLIGWWYGRADAnTAALQAVLYNRIGD---IGFILAMAWfLTNLNTWDLQQIFMLNPSdSNMPLIGLALAATG---KS 224
Cdd:PRK07363  143 FYLLIAIWGGEKRG-YASIKFLIYTAVSGllvLAAFLGIVW-LSGSTSFDYDAISTQNLS-LNTQLILLTGLLLGfgiKI 219
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 225 AQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRF----YPLTENnkFIQSITLCLGAITTLFTAMCALTQNDIKK 300
Cdd:PRK07363  220 PLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFglqlFPQTWS--LVAPGLAIIGTISVIYGALSAIAQKDIKR 297
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 301 IIAFSTSSQLGLMMVTIGINQPYL---AFLHICTHAFFKAMLFMCSGsIIHSLNDEQDIRKMGGLF---KAMPFTTTALI 374
Cdd:PRK07363  298 MVAYSSIGHMGYILVAAAAGTQLSllgAVAQMISHGLILALLFHLVG-IVERKVGTRDLDVLNGLMnpiRGLPLTSALLV 376
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*...
gi 1736209022 375 VGSLALTGMPFLTGFYSKDLIIEAANTSYtnAWALLMTLIATSFTAIY 422
Cdd:PRK07363  377 LAGMASAGIPGLVGFVAEFIVFQGSFSTF--PIPTLLCIVASGLTAVY 422
ndhB CHL00049
NADH dehydrogenase subunit 2
66-482 1.25e-10

NADH dehydrogenase subunit 2


Pssm-ID: 176990 [Multi-domain]  Cd Length: 494  Bit Score: 63.87  E-value: 1.25e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  66 WHWLTIQTLKLSLSFKMDYFSMMFTPVALFVTWSIMEFSMWYMH-SDPNINKFFKYLLLFLITMLILVTANNLFQLFIGW 144
Cdd:CHL00049   61 FQWREEPMISFSGNFQTNNFNEIFQFLILLCSTLCIPLSVEYIEcTEMAITEFLLFVLTATLGGMFLCGANDLITIFVAL 140
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 145 EGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGFILAMAWfLTNLNTWDLQ------QIFMLNPSDSNMPLIGLAL 218
Cdd:CHL00049  141 ECLSLCSYLLSGYTKKDVRSNEATMKYLLMGGASSSILVYGFSW-LYGLSGGEIElqeivnGLINTQMYNSPGISIALIF 219
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 219 AATG---KSAQFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIR-----FYPLTENNKFIQSITLCLgaiTTLFTA 289
Cdd:CHL00049  220 ITVGigfKLSLAPFHQWTPDVYEGsPTPVVAFL-SVTSKVAASALATRifdipFYFSSNEWHLLLEILAIL---SMILGN 295
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 290 MCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFkaMLFMCSGS----IIHSLNDEQD-IRKMGGLFK 364
Cdd:CHL00049  296 LIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLF--YIFMNLGTfaciVLFGLRTGTDnIRDYAGLYT 373
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 365 AMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSytNAWALLMTLIATSFTAIY-STRIIFFALLGQPRFPTLVSI 443
Cdd:CHL00049  374 KDPFLALSLALCLLSLGGIPPLAGFFGKLYLFWCGWQA--GLYFLVSIGLLTSVISIYyYLKIIKLLMTGRNQEITPYVR 451
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*
gi 1736209022 444 NENNPLLI--NSIKRLLI----GSLFAGYIISnniPPTTIPQMTM 482
Cdd:CHL00049  452 NYRRSPLRsnNSIELSMIvcviASTIPGISMN---PIIAIAQDTL 493
ND4 MTH00204
NADH dehydrogenase subunit 4; Provisional
58-423 2.82e-10

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 164750 [Multi-domain]  Cd Length: 485  Bit Score: 62.77  E-value: 2.82e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  58 GQELIISNWHWLTIQTLKL---SLSFKMDYFSMMF-------TPVALFVTWSIMEFsmwymhsdpnINKFFKYLLLFLIT 127
Cdd:MTH00204   54 GQFQFINLIEWIISPTLNFqwgPLVFAVDGVSLFFillttllIPICILISWKSIKF----------LFKEFLLCLLFLEV 123
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 128 MLILV-TANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDLQQIFM--L 204
Cdd:MTH00204  124 LLIGVfSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNikL 203
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 205 NPSDSNMPLIGLALAATGKSAQFGLHPWLPSA-MEGPTPVSALLhsstmvvAGIFL------LIRF-YPL-TENNKFIQS 275
Cdd:MTH00204  204 PLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAhVEAPVAGSVIL-------AGILLklggygFLRFsWPLfPAASEYFAP 276
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 276 ITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLmmVTIGINQPYL-----AFLHICTHAFFKAMLFMCSgSIIHSL 350
Cdd:MTH00204  277 LIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGL--VPLGLFTHTIeglvaAVFLMLAHGFVSSALFIAV-TFLYER 353
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1736209022 351 NDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTsyTNAWALLMTLIATSFTAIYS 423
Cdd:MTH00204  354 HHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFE--YSLGLGVLVTSGMVWSAAYS 424
ND4 MTH00226
NADH dehydrogenase subunit 4; Provisional
119-396 7.12e-10

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214466 [Multi-domain]  Cd Length: 505  Bit Score: 61.48  E-value: 7.12e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 119 KYLLL-FLITMLIL-------VTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGFILAMAWFL 190
Cdd:MTH00226  127 KYLTKsFLICMLILefllyavFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLY 206
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 191 TNLNTWDLQQI----FMLNPSDSNMPLIGLALAATGKSAQFGLHPWLPSA-MEGPTPVSALLHSSTMVVAGIFLLIRFYP 265
Cdd:MTH00226  207 NIHGTTDYLTLascsHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWP 286
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 266 -LTENNKFIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVT------IGINQPYLAFLhicTHAFFKAM 338
Cdd:MTH00226  287 iLPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITlvthdiIGLTGSIFIML---AHGIVSSL 363
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1736209022 339 LFMCSgSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLII 396
Cdd:MTH00226  364 LFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSI 420
PRK02504 PRK02504
NAD(P)H-quinone oxidoreductase subunit N;
79-392 1.39e-09

NAD(P)H-quinone oxidoreductase subunit N;


Pssm-ID: 235044 [Multi-domain]  Cd Length: 513  Bit Score: 60.84  E-value: 1.39e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  79 SFKMDYFSMMFTPVALFVTWSIMEFSMWYM-HSDPNINKFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGW 157
Cdd:PRK02504   73 SFNADNLSIAFRAIIALSTLVTLLMSWRYVeQSGTPLGEFAAILLTATLGGMFLSGATELVMIFISLETLSIASYLLTGY 152
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 158 WYGRADANTAALQAVLynrIGDIgfilAMAWFLtnlntWDLQQIFMLNPSDSNMPLIGLALAATG--------------- 222
Cdd:PRK02504  153 MKRDPRSNEAALKYLL---IGAA----SSAIFL-----YGSSLLYGLSGGSTQLSAIALALITSPslglalalvfviagi 220
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 223 --KSAQFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIR-----FYPLTENNKFIQSItlcLGAITTLFTAMCALT 294
Cdd:PRK02504  221 afKISAVPFHQWTPDVYEGsPTPVVAFL-SVGSKAAGFALAIRllvtaFPSFDEQWKLLFTA---LAILSMVLGNVVALA 296
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 295 QNDIKKIIAFSTSSQLGLMMV--TIGINQPYLAF-LHICTHAFFKAMLFMCSgsIIHSLNDEQD-IRKMGGLFKAMPFTT 370
Cdd:PRK02504  297 QTSMKRMLAYSSIGQAGFVMIglVAGTEAGYASMvFYLLAYLFMNLGAFACV--ILFSLRTGTDqISDYAGLYQKDPLLT 374
                         330       340
                  ....*....|....*....|..
gi 1736209022 371 TALIVGSLALTGMPFLTGFYSK 392
Cdd:PRK02504  375 LGLSLCLLSLGGIPPLAGFFGK 396
PRK02546 PRK02546
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
116-421 2.25e-08

NAD(P)H-quinone oxidoreductase subunit 4; Provisional


Pssm-ID: 235050 [Multi-domain]  Cd Length: 525  Bit Score: 57.02  E-value: 2.25e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 116 KFFKYLLLFLITMLILVTA-NNLFQLFIGWEGVGIMSFLLIGWWYGRaDANTAALQAVLYNRIGDIgFIL----AMAwFL 190
Cdd:PRK02546  115 KLFYFLMLAMYGGQIAVFAvQDMLLFFLAWELELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSL-FILlaalAMA-FY 191
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 191 TNLNTWDLQQIFMLN--PSDSNMPLIGLALAATGKSAQFGLHPWLPSAM-EGPTPVSALLhsstmvvAGIFL------LI 261
Cdd:PRK02546  192 GDTPTFDMTALAAKDfgLGFQLLCYAGLLIAYGVKLPIVPLHTWLPDAHgEATAPVHMLL-------AGILLkmggyaLL 264
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 262 RFYP--LTENNKFIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYL---AFLHICTHAFFK 336
Cdd:PRK02546  265 RMNAgmLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGtsgAMLQMISHGLIG 344
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 337 AMLFMCSGSI---IHSLNDEQdirkMGGLFKAMP-----FTTTALivGSLALTGMpflTGFYSKDLIIEAANTSytNAWA 408
Cdd:PRK02546  345 ASLFFLVGATydrTHTLMLDE----MGGVGQKMRkmfamWTACSL--ASLALPGM---SGFVAELMVFVGFATS--DAYT 413
                         330
                  ....*....|...
gi 1736209022 409 LLMTLIATSFTAI 421
Cdd:PRK02546  414 LPFRVVVVFLAAV 426
ND2 MTH00196
NADH dehydrogenase subunit 2; Provisional
123-460 2.56e-08

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214453 [Multi-domain]  Cd Length: 365  Bit Score: 56.19  E-value: 2.56e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 123 LFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGFILAMAWF-----LTNLNTWD 197
Cdd:MTH00196    1 MVALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCALLcgttgGLHLSYIN 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 198 LQQIFMLNPSDSNMP----LIGLALAATGKSAQFglHPWLPSAMEG-PTPVSALLhsSTMVVAGIFLLIRFYPLTENnkf 272
Cdd:MTH00196   81 LVLNSGQSFSSVSVPigylLIIVALLFKLSVAPF--HMWAPDVYEGaPTKTTALL--AIVPKLGIFSILVSIGLNVN--- 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 273 iqsITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQpyLAFLHIC-THAFFKAMLFMCSGSIIHSLN 351
Cdd:MTH00196  154 ---ILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGS--FESIQASlVYLFIYIIMSICVFSIILALN 228
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 352 DEQD-IRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAAnTSYTNAWALLMTLIATSFTAIYSTRIIFFa 430
Cdd:MTH00196  229 VYKNlIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSG-VVYQYYLIFLLAVFCSVIAGVYYVRIVKI- 306
                         330       340       350
                  ....*....|....*....|....*....|.
gi 1736209022 431 LLGQPRFPTLVSINE-NNPLLINSIKRLLIG 460
Cdd:MTH00196  307 LFFQANSFLLISTKIlKKENKINLRKALLIG 337
ndhD CHL00011
NADH dehydrogenase subunit 4
116-421 3.26e-08

NADH dehydrogenase subunit 4


Pssm-ID: 176954 [Multi-domain]  Cd Length: 498  Bit Score: 56.49  E-value: 3.26e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 116 KFFKYLLLFLITMLI-LVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADAnTAALQAVLYNRIGDIGF---ILAMAWFLT 191
Cdd:CHL00011  112 RLFYFLMLAMYSGQIgLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRL-YSATKFILYTAGGSIFLligVLGMGLYGS 190
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 192 NLNTWDLQqifmlNPSDSNMPL-------IGLALAATGKSAQFGLHPWLPSamegpTPVSAllHSST-MVVAGIFL---- 259
Cdd:CHL00011  191 NEPTLNFE-----TLANQSYPValeilfyIGFLIAYAVKLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLkmga 258
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 260 --LIRF-YPLTENNKFIQSITLCL-GAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIG-INQPYL--AFLHICTH 332
Cdd:CHL00011  259 ygLIRInMELLPHAHSIFSPWLVIvGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGsITDTGLngAILQIISH 338
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 333 AFFKAMLFMCSGSI---IHSLNDEQdirkMGGLFKAMP--FTT-TALIVGSLALTGMpflTGFYSKDLIIEAANTSytNA 406
Cdd:CHL00011  339 GFIGAALFFLAGTSydrIRLVYLDE----MGGIAIPMPkiFTMfSSFSMASLALPGM---SGFVAELIVFFGIITS--QK 409
                         330
                  ....*....|....*
gi 1736209022 407 WALLMTLIATSFTAI 421
Cdd:CHL00011  410 YLLMPKILITFVMAI 424
ND4 MTH00217
NADH dehydrogenase subunit 4; Provisional
54-319 5.24e-08

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214462 [Multi-domain]  Cd Length: 482  Bit Score: 55.83  E-value: 5.24e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  54 FIHSGQELIISNWHWL-TIQTLKLSLSFKMDYFSMMF-------TPVALFVTWSIMEFSmwymhsdpnINKFFKYLLLFL 125
Cdd:MTH00217   49 FDGEGQFQAIKKFEWIpGIEPVFGPVVFAVDGISIFFliltallTPICILISWNSIKFL---------IKEFLLCLLVIE 119
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 126 ITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDLQQI--FM 203
Cdd:MTH00217  120 ILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALccLK 199
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 204 LNPSDSNMPLIGLALAATGKSAQFGLHPWLPSA-MEGPTPVSALLhsstmvvAGIFL------LIRF-YPL-TENNKFIQ 274
Cdd:MTH00217  200 IEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAhVEAPVAGSVIL-------AGVLLklggygFIRFsWPLlPEASEYFS 272
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 1736209022 275 SITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLmmVTIGI 319
Cdd:MTH00217  273 PLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGL--VTLGI 315
PRK06459 PRK06459
hydrogenase 4 subunit B; Validated
76-346 5.31e-08

hydrogenase 4 subunit B; Validated


Pssm-ID: 235806 [Multi-domain]  Cd Length: 585  Bit Score: 55.95  E-value: 5.31e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  76 LSLSFKMDYFSMMFTPVALFVTWsimeFSMWYMHSDPNINKFFKYLLLfliTMLILVTANNLFQLFIGWEGVGIMSFLLI 155
Cdd:PRK06459   40 YEYNGVLSFFSIISTIVWILASL----YSIEYDHYGKWLSSLYILTIL---GMAIVLTSDNYLLFLAGWEIMTIPSYVAI 112
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 156 GWWygrADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTwdlqqiFMLNPSDSNMPLIGLALAATGKSAQFGLH--PWL 233
Cdd:PRK06459  113 ALT---KKNKRPAFVFMAFGELSTVLILAGFAWAFIISGT------TNFSYLPSPVPLILASFGFIIKMGMMPFLvsEWL 183
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 234 PSAM-EGPTPVSALLhSSTMVVAGIFLLIRFYPLTENN--KFIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTS--- 307
Cdd:PRK06459  184 PIAHgNAPSNFSAIL-SATMTLMGVYGILKMTILTQTIpiGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIenn 262
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 1736209022 308 ----SQLGLMMVT------IGINQPYLAFLHICTHAFFKAMLFMCSGSI 346
Cdd:PRK06459  263 gailVALGLYMVTkqlitsIEHFSLITVILYSFAHSVAKTGLFLSSGLQ 311
ND2 MTH00112
NADH dehydrogenase subunit 2; Provisional
192-397 6.34e-08

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214423 [Multi-domain]  Cd Length: 346  Bit Score: 54.83  E-value: 6.34e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 192 NLNTWDLQQifMLNPSDSNMpligLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLirfypLTENNK 271
Cdd:MTH00112   80 NTGQWDITQ--LTNPTSCTL----LTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLL-----LMTSNS 148
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 272 FIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINqPYLAFLHICTHAFFKAMLFMcsgsIIHSLN 351
Cdd:MTH00112  149 LNPTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYS-PKLTLLTFYIYILMTTPMFL----TLNTTS 223
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*.
gi 1736209022 352 DEQdIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIE 397
Cdd:MTH00112  224 TKT-LKDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTGFMPKWLILQ 268
ND4 MTH00206
NADH dehydrogenase subunit 4; Provisional
17-423 9.42e-08

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214458 [Multi-domain]  Cd Length: 450  Bit Score: 54.56  E-value: 9.42e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  17 MPIMMMSLNTYKPSNYPLYVKTAISYAFITSMIPTMMFIHSgqeliisnWHwltiqtlKLSLSFKMDYFSMMFTPVALFV 96
Cdd:MTH00206    7 IMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVG--------WS-------FSNLYLSYDPLSSPLVILSCWL 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  97 TWSIMEFSMWYMHSDPNIN-KFFKYLLLFLITMLILV-TANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLY 174
Cdd:MTH00206   72 LPLMFLASQNHMKNEPINRqRIYITLLIVLQLFLILFfSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFY 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 175 NRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPSDSNMPLIGLA--LAATGKSAQFGLHPWLPSA-MEGPTpvsallhSST 251
Cdd:MTH00206  152 TLIGSLPLLIALLFLQNSLGSLSLYILYFSKLTTWNNNLWWLAciLAFLVKLPLYGVHLWLPKAhVEAPV-------AGS 224
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 252 MVVAGIFL------LIRFYPLTEN-NKFIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYL 324
Cdd:MTH00206  225 MVLAGVLLklggygMMRIILILGPsTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWG 304
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 325 ---AFLHICTHAFFKAMLFmCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANT 401
Cdd:MTH00206  305 fkgALLLMIAHGLVSSALF-CLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFS 383
                         410       420
                  ....*....|....*....|..
gi 1736209022 402 SYTnaWALLMTLIATSFTAIYS 423
Cdd:MTH00206  384 WSN--FTLPLLGLGFLFTAIYS 403
PRK12664 PRK12664
putative monovalent cation/H+ antiporter subunit D; Reviewed
275-405 5.92e-07

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237164 [Multi-domain]  Cd Length: 527  Bit Score: 52.43  E-value: 5.92e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 275 SITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPY-----LAFLHICTHAFFKAMLFMCSGSIIHS 349
Cdd:PRK12664  202 EILLFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSgvaigILILQIVLSVVYQTLLFMVADSVINR 281
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1736209022 350 lNDEQDIRKMGGLFKaMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTN 405
Cdd:PRK12664  282 -TRKFNLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLT 335
ND2 MTH00200
NADH dehydrogenase subunit 2; Provisional
121-469 6.48e-07

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177246 [Multi-domain]  Cd Length: 347  Bit Score: 51.89  E-value: 6.48e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 121 LLLFLITMLILvTANNLFQLFIGWEgVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDLQQ 200
Cdd:MTH00200   11 LSLGLGTLLTF-SSSHWFLIWLGLE-INTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWTSGQWGISE 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 201 ifMLNPSDSNMPLIGLALaatgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNkfiqsITLCL 280
Cdd:MTH00200   89 --MLGPLSETLILLALAL----KLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSN-----ILLLL 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 281 GAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINqPYLAFLHicthaFFKAMLFMCSGSIIHSLNDEQDIRKMG 360
Cdd:MTH00200  158 GLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS-PNLALLY-----LLLYVIITLTVFLLLNLLNSTKINSLS 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 361 GLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIeAANTSYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFPTL 440
Cdd:MTH00200  232 SSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLIL-QELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQIN 310
                         330       340
                  ....*....|....*....|....*....
gi 1736209022 441 VSINENNPLLINSIKRLLIGSLFAGYIIS 469
Cdd:MTH00200  311 MMSSWRTKSNSNLLVGLLLLLSILGLPLT 339
ND4 MTH00163
NADH dehydrogenase subunit 4; Provisional
75-317 1.15e-06

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214443 [Multi-domain]  Cd Length: 445  Bit Score: 51.31  E-value: 1.15e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  75 KLSLSFKMDYFSMMFTPVALFVTwSIMEFSMWYMHSDPNINKFFKYLLLFLITMLILV-TANNLFQLFIGWEGVGIMSFL 153
Cdd:MTH00163   47 NISYFFGLDLLSFGLILLSFWIC-MLMILSSESVYKKNNYSNLFLFLILFLLIFLLLTfSSMNLLLFYIFFESSLIPTLF 125
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 154 LIGWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPSDSNMPLIGLaLAATGKSAQFGLHPWL 233
Cdd:MTH00163  126 LILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNNSGSLSFFLLNFFGSLNFLWYLSMI-LAFLVKMPMFFVHLWL 204
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 234 PSA-MEGPTpvsallhSSTMVVAGIFL------LIRFYPLTEN-NKFIQSITLCLGAITTLFTAMCALTQNDIKKIIAFS 305
Cdd:MTH00163  205 PKAhVEAPV-------SGSMILAGVLLklggygLLRVMSFFSKlGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYS 277
                         250
                  ....*....|..
gi 1736209022 306 TSSQLGLMMVTI 317
Cdd:MTH00163  278 SVAHMGLVLGGL 289
ND4 MTH00044
NADH dehydrogenase subunit 4; Validated
64-446 3.11e-05

NADH dehydrogenase subunit 4; Validated


Pssm-ID: 214411 [Multi-domain]  Cd Length: 458  Bit Score: 46.89  E-value: 3.11e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  64 SNWHWLTIQTLKLSLSFKMDYFSMMFTPVALFVTWSIMEFsmwymHSDPNINKFFKYLLLFLITMLILVTANNLFQLFIG 143
Cdd:MTH00044   48 SSWHNLSLSLATDSLSSPLIILSCWLAPLSLLASINHLSN-----NSPNNQRTFISLIIIILTALIITFSSLELILFYIA 122
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 144 WEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPSDSNMPLIGL-----AL 218
Cdd:MTH00044  123 FETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIwwifcIL 202
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 219 AATGKSAQFGLHPWLPSA-MEGPTPVSallhsstMVVAGIFL------LIRFYPL--TENNKFIQSITLCLGAITTLFTA 289
Cdd:MTH00044  203 AFLVKMPIYGFHLWLPKAhVEAPVAGS-------MILAAILLklggygLIRLINLfsLPSANNISFILIVFCCWGALITS 275
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 290 MCALTQNDIKKIIAFSTSSQLGLMMVTI------GINQpylAFLHICTHAFFKAMLFmCSGSIIHSLNDEQDIRKMGGLF 363
Cdd:MTH00044  276 IICLRQTDLKALIAYSSVGHMSLVAAGIfsgtnwGING---ALILMIAHGLVSSALF-CLANILYERSGTRTLSITRGFK 351
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 364 KAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTsyTNAWALLMTLIATSFTAIYSTRIifFALLGQPRFPTLVSI 443
Cdd:MTH00044  352 LITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIIS--WSILSFPIIGLATVFGAIYSLLI--YQLTNSGSFPSWISN 427

                  ...
gi 1736209022 444 NEN 446
Cdd:MTH00044  428 VSP 430
ND4 MTH00205
NADH dehydrogenase subunit 4; Provisional
76-317 9.07e-05

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214457 [Multi-domain]  Cd Length: 448  Bit Score: 45.36  E-value: 9.07e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  76 LSLSFKMDYFSMMFTPVALFVTwSIMEFSMWYMHSDPNINKFFKYLLLFLITMLILV-TANNLFQLFIGWEGVGIMSFLL 154
Cdd:MTH00205   49 ISSSFSFDSLSLPLIMLSFWIS-LLMVLASYKVFKSNKNSKLFTVSVIMLLLILILSfSVDNLLLFYITFEASLIPTLIL 127
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 155 IGWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPSDSNMPL--IGLALAATGKSAQFGLHPW 232
Cdd:MTH00205  128 ILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFSDFYLFLywIFLMLAFLVKLPMYFVHLW 207
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 233 LPSA-MEGPTpvsallhSSTMVVAGIFL------LIRF-YPLTENNKFIQSITLCLGAITTLFTAMCALTQNDIKKIIAF 304
Cdd:MTH00205  208 LPKAhVEAPV-------SGSMILAGVLLklggygLIRItSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAY 280
                         250
                  ....*....|...
gi 1736209022 305 STSSQLGLMMVTI 317
Cdd:MTH00205  281 SSVGHMGLMVVGV 293
ND4 MTH00014
NADH dehydrogenase subunit 4; Validated
37-321 2.48e-04

NADH dehydrogenase subunit 4; Validated


Pssm-ID: 214399 [Multi-domain]  Cd Length: 452  Bit Score: 43.96  E-value: 2.48e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  37 KTAISYAFITSMIPTMmfihsgqeLIISNWHWLTIQTLKLSLSFKMDYFSMMFTPVALFVTWSIMEFSMWYMHSDPNINK 116
Cdd:MTH00014   20 PWSWALTFSTLLLLSL--------FTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASFKIFQNNKAPKT 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 117 FFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTW 196
Cdd:MTH00014   92 FMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSL 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 197 DLQQIFMLNPSD--SNMPLIGLALAATGKSAQFGLHPWLPSA-MEGPTpvsallhSSTMVVAGIFL------LIRF-YPL 266
Cdd:MTH00014  172 SMLMSSMEPPSIylMNLWWLITILAFMVKMPLYTVHLWLPKAhVEAPV-------AGSMILAGILLklggygLLRMsSLF 244
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1736209022 267 TENNKFIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQ 321
Cdd:MTH00014  245 MHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNT 299
ND4 MTH00150
NADH dehydrogenase subunit 4; Provisional
76-313 5.98e-04

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214435 [Multi-domain]  Cd Length: 417  Bit Score: 42.52  E-value: 5.98e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  76 LSLSFKMDYFSMMFTPVALFVTwSIMEFSMWYMHSDPNINKFFKYLLLFLITMLILV-TANNLFQLFIGWEGVGIMSFLL 154
Cdd:MTH00150   16 LSELFSVDSMSSLLISLSLWIS-GLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAfSVSSLLMFYFFFEASLIPTLLL 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 155 IGWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDLQQIFMLNPSDSNMPLIGLA--LAATGKSAQFGLHPW 232
Cdd:MTH00150   95 ILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMGLWGLLvfLAFLVKLPMYPFHLW 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 233 LPSA-MEGPTpvsallhSSTMVVAGIFL------LIRFYPLTE-NNKFIQSITLCLGAITTLFTAMCALTQNDIKKIIAF 304
Cdd:MTH00150  175 LPKAhVEAPV-------AGSMILAGILLklggygILRMMMVFSlSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAY 247

                  ....*....
gi 1736209022 305 STSSQLGLM 313
Cdd:MTH00150  248 SSVGHMSLV 256
ND4 MTH00127
NADH dehydrogenase subunit 4; Provisional
87-423 7.31e-04

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 177186 [Multi-domain]  Cd Length: 459  Bit Score: 42.25  E-value: 7.31e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022  87 MMFTPVALFVTW----SIMEFSMWYMHSDPNINKFFKYLLLFLITMLILV-TANNLFQLFIGWEGVGIMSFLLIGWWYGR 161
Cdd:MTH00127   61 PLSTPLLVLTCWllplMILASQNHTAPEPINRQRMYITLLTSLQIFLILAfGATEIIMFYVMFEATLIPTLIIITRWGNQ 140
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 162 ADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDL-----QQIFMLNPSDSNMPLIGLALAATGKSAQFGLHPWLPSA 236
Cdd:MTH00127  141 TERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMltlqySQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKA 220
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 237 -MEGPTPVSALLHSSTMVVAG---IFLLIRFYPLTENNKFIQSITLCLGAITTlftAMCALTQNDIKKIIAFSTSSQLGL 312
Cdd:MTH00127  221 hVEAPIAGSMVLAAVLLKLGGygmMRMMVMLDPLTKELSYPFIILALWGIIMT---GSICLRQTDLKSLIAYSSVSHMGL 297
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 313 MMVTIGINQPYL---AFLHICTHAFFKAMLFmCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGF 389
Cdd:MTH00127  298 VAGGILIQTPWGftgALILMIAHGLTSSALF-CLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNL 376
                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1736209022 390 YSKDLIIEAA-NTSYtnaWALLMTLIATSFTAIYS 423
Cdd:MTH00127  377 MGELMIITSLfNWSP---WTLALTGLGTLITAGYS 408
ND2 MTH00199
NADH dehydrogenase subunit 2; Provisional
230-396 1.41e-03

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177245 [Multi-domain]  Cd Length: 460  Bit Score: 41.54  E-value: 1.41e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 230 HPWLPSAMEG-PTPVSALLhsSTMVVAGIF-LLIRFYPLTEnnkfiqsITLCLGAITTLFTAMCALTQNDIKKIIAFSTS 307
Cdd:MTH00199  210 HMWAPDVYEGaPTITTALL--ATVPKIGVFsILVQIGPVTN-------VVLICAVLSIIYGAIGALNQTKIKRLLAYSGI 280
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 308 SQLG--LMMVTIGINQPYLAFLhicTHAFFKAMLFMCSGSIIHSLNDEQD-IRKMGGLFKAMPFTTTALIVGSLALTGMP 384
Cdd:MTH00199  281 GHMGfiLFGVAIGSFESIQASL---IYMIIYVIMSICSFSIILSLKLTKGlIVEVSGLSRKNPVIALTLALTFLSIAGIP 357
                         170
                  ....*....|..
gi 1736209022 385 FLTGFYSKDLII 396
Cdd:MTH00199  358 PLAGFLSKWLIL 369
ND2 MTH00070
NADH dehydrogenase subunit 2; Provisional
185-397 1.72e-03

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177142 [Multi-domain]  Cd Length: 346  Bit Score: 41.06  E-value: 1.72e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 185 AMAWFLTNLNTWDLQQIFMLNPSdSNMPLIGLALAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFY 264
Cdd:MTH00070   68 ALILFSSTINAWFTGEWTIMNMQ-TPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQIS 146
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 265 PLTENNkfiqsITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINqPYLAFLH-----ICTHAFFKAML 339
Cdd:MTH00070  147 HLLNSN-----LLIIMGLLSTLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFS-PHLTLLNlliylIMTSSMFLMLM 220
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1736209022 340 FMCSGSiihslndeqdIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIE 397
Cdd:MTH00070  221 NLNSTN----------INKLSSSWSKNPTLTSMMMLTLLSLGGLPPTTGFIPKWLILQ 268
ND2 MTH00144
NADH dehydrogenase subunit 2; Provisional
227-422 1.87e-03

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214432 [Multi-domain]  Cd Length: 328  Bit Score: 40.64  E-value: 1.87e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 227 FGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRFYPLTENNKFIqsitLCLGAITTLFTAMCALTQNDIKKIIAFST 306
Cdd:MTH00144  101 FPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLL----CVISVLSALVGSIGGLNQTQVRALLAYSS 176
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 307 SSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLndeqdirKMGGLFKAMPFTTTALIVGSLALTGMPFL 386
Cdd:MTH00144  177 ISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSM-------KDLGSLKPSYKTGLSIISLLLSLGGLPPF 249
                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 1736209022 387 TGFYSKDLIIEAANTSytNAWALLMTLIATSFTAIY 422
Cdd:MTH00144  250 LGFCSKLLVLISSMES--SPLLLILLLLLGSLISLF 283
ND4 MTH00068
NADH dehydrogenase subunit 4; Provisional
122-423 9.54e-03

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214417 [Multi-domain]  Cd Length: 458  Bit Score: 38.74  E-value: 9.54e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 122 LLFLITMLILV-TANNLFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVLYNRIGDIGFILAMAWFLTNLNTWDLQQ 200
Cdd:MTH00068   99 LIILQLTLILAfSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLILQNSLGSLSLIL 178
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 201 IFMLNPSDSNMPLIGL-----ALAATGKSAQFGLHPWLPSA-MEGPTPVSallhsstMVVAGIFL------LIRFYP-LT 267
Cdd:MTH00068  179 LELMSPMQLMTYTNKIwwlacLLAFMVKMPLYGLHLWLPKAhVEAPIAGS-------MILAAVLLklggygILRISIlLT 251
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 268 ENNKFIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYL---AFLHICTHAFFKAMLFmCSG 344
Cdd:MTH00068  252 PLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSfsgAIILMISHGLTSSALF-CLA 330
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1736209022 345 SIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAA-NTSYtnaWALLMTLIATSFTAIYS 423
Cdd:MTH00068  331 NTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLfNWSN---WTILITGLGTLITAAYT 407
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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