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Conserved domains on  [gi|1730658033|gb|QEI10919|]
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NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta [Cellvibrio japonicus]

Protein Classification

NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta( domain architecture ID 10003429)

NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta is part of a tetrameric membrane-bound proton pump (composed of two alpha and two beta subunits) that catalyzes the reversible transfer of a hydride ion equivalent between NAD and NADP

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PntB COG1282
NAD/NADP transhydrogenase beta subunit [Energy production and conversion];
6-466 0e+00

NAD/NADP transhydrogenase beta subunit [Energy production and conversion];


:

Pssm-ID: 440893  Cd Length: 458  Bit Score: 704.14  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033   6 ESLTSLAYLVAAVLFIMALRGLSSPESSRRGNFFGMLGMAIAIVTTILSPAVTSYTWIVVALLIGAVIGIVIARKIAMTA 85
Cdd:COG1282     3 NTLITLAYLVAAVLFILGLKGLSSPETARRGNLLGAVGMLIAVVATLLLPGIVNYGLILAAIAIGGAIGAVLARKVEMTA 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033  86 MPQLVAAFHSLVGLAAVLVAGAAFSNPEAFgivnaAGEIYIASRIEMGLGVVIGAITFSGSVIAFTKLQGLVSGKPMVFG 165
Cdd:COG1282    83 MPQLVALFNGFGGLAAALVAAAELLEPGAL-----AGALPAIHLIEIVLGVLIGAVTFTGSLIAFGKLQGLISGKPITFP 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033 166 GQHLLNALIGAVIIGLIGYFCV-EQAPWVFWTMTALAFVIGILLIIPIGGADMPVVVSMLNSYSGWAAAGIGFTLHNDAL 244
Cdd:COG1282   158 GQHLLNLLLLLAIVALGVLFVVsPGSLLLLLLLTVLALLLGVLLVLPIGGADMPVVISLLNSYSGLAAAAAGFVLGNDLL 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033 245 IVTGALVGSSGAILSYIMCKGMNRSFFNVILGGFGADASAAAASGgEDRPVKRGSAEDAAFIMKNAGSVIIVPGYGMAVA 324
Cdd:COG1282   238 IIAGALVGASGAILTYIMCKAMNRSLINVLFGGFGGGGAAAAGAA-EQGEVKEISAEDAAILLAYASSVIIVPGYGMAVA 316

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033 325 QAQHALREMADELKHAGVKVSYAIHPVAGRMPGHMNVLLAEANVPYDEVFELEDINNEFQTADVAFVIGANDVTNPAAKT 404
Cdd:COG1282   317 QAQHAVRELADLLEERGVEVKFAIHPVAGRMPGHMNVLLAEANVPYDQLLEMDEINPEFAQTDVALVIGANDVVNPAART 396

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1730658033 405 NPQSPIFGMPILEVEKARTVLFVKRSMASGYAGVENELFHRDNTMMLFGDAKKMVETIVKNL 466
Cdd:COG1282   397 DPGSPIYGMPILEVDKAKTVIVIKRSMGPGYAGVENPLFYKDNTRMLFGDAKKSVEELVKAL 458
 
Name Accession Description Interval E-value
PntB COG1282
NAD/NADP transhydrogenase beta subunit [Energy production and conversion];
6-466 0e+00

NAD/NADP transhydrogenase beta subunit [Energy production and conversion];


Pssm-ID: 440893  Cd Length: 458  Bit Score: 704.14  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033   6 ESLTSLAYLVAAVLFIMALRGLSSPESSRRGNFFGMLGMAIAIVTTILSPAVTSYTWIVVALLIGAVIGIVIARKIAMTA 85
Cdd:COG1282     3 NTLITLAYLVAAVLFILGLKGLSSPETARRGNLLGAVGMLIAVVATLLLPGIVNYGLILAAIAIGGAIGAVLARKVEMTA 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033  86 MPQLVAAFHSLVGLAAVLVAGAAFSNPEAFgivnaAGEIYIASRIEMGLGVVIGAITFSGSVIAFTKLQGLVSGKPMVFG 165
Cdd:COG1282    83 MPQLVALFNGFGGLAAALVAAAELLEPGAL-----AGALPAIHLIEIVLGVLIGAVTFTGSLIAFGKLQGLISGKPITFP 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033 166 GQHLLNALIGAVIIGLIGYFCV-EQAPWVFWTMTALAFVIGILLIIPIGGADMPVVVSMLNSYSGWAAAGIGFTLHNDAL 244
Cdd:COG1282   158 GQHLLNLLLLLAIVALGVLFVVsPGSLLLLLLLTVLALLLGVLLVLPIGGADMPVVISLLNSYSGLAAAAAGFVLGNDLL 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033 245 IVTGALVGSSGAILSYIMCKGMNRSFFNVILGGFGADASAAAASGgEDRPVKRGSAEDAAFIMKNAGSVIIVPGYGMAVA 324
Cdd:COG1282   238 IIAGALVGASGAILTYIMCKAMNRSLINVLFGGFGGGGAAAAGAA-EQGEVKEISAEDAAILLAYASSVIIVPGYGMAVA 316

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033 325 QAQHALREMADELKHAGVKVSYAIHPVAGRMPGHMNVLLAEANVPYDEVFELEDINNEFQTADVAFVIGANDVTNPAAKT 404
Cdd:COG1282   317 QAQHAVRELADLLEERGVEVKFAIHPVAGRMPGHMNVLLAEANVPYDQLLEMDEINPEFAQTDVALVIGANDVVNPAART 396

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1730658033 405 NPQSPIFGMPILEVEKARTVLFVKRSMASGYAGVENELFHRDNTMMLFGDAKKMVETIVKNL 466
Cdd:COG1282   397 DPGSPIYGMPILEVDKAKTVIVIKRSMGPGYAGVENPLFYKDNTRMLFGDAKKSVEELVKAL 458
PNTB pfam02233
NAD(P) transhydrogenase beta subunit; This family corresponds to the beta subunit of NADP ...
 11-465 0e+00

NAD(P) transhydrogenase beta subunit; This family corresponds to the beta subunit of NADP transhydrogenase in prokaryotes, and either the protein N- or C terminal in eukaryotes. The domain is often found in conjunction with pfam01262. Pyridine nucleotide transhydrogenase catalyzes the reduction of NAD+ to NADPH. A complete loss of activity occurs upon mutation of Gly314 in E. coli.


Pssm-ID: 460502  Cd Length: 454  Bit Score: 666.46  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033  11 LAYLVAAVLFIMALRGLSSPESSRRGNFFGMLGMAIAIVTTIL---SPAVTSYTWIVVALLIGAVIGIVIARKIAMTAMP 87
Cdd:pfam02233   1 AAYLVAAVLFILGLKGLSSPKTARRGNLLGAIGMALAIVATLLlgaLADSLPYGLILIAIAIGGVIGLYIARRVKMTAMP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033  88 QLVAAFHSLVGLAAVLVAGAAFSNPEAFGIvnaagEIYIASRIEMGLGVVIGAITFSGSVIAFTKLQGLVSGKPMVFGGQ 167
Cdd:pfam02233  81 QLVALFHSLGGLAAVLVAIAEYLAPEAFGA-----GISAFHLVEIVLGVLIGAVTFTGSLIAFGKLQGLLSSKPLTLPGR 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033 168 HLLNALIGAVIIGLIGYFCVEQAPWVFWTMTALAFVIGILLIIPIGGADMPVVVSMLNSYSGWAAAGIGFTLHNDALIVT 247
Cdd:pfam02233 156 HLLNLLLLLAIVVLGVLFVAAPSSPGLWLLTALALLLGVLLVLPIGGADMPVVISLLNSYSGWAAAAAGFVLGNPLLIIA 235

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033 248 GALVGSSGAILSYIMCKGMNRSFFNVIL-GGFGADASAAAASGGEDRPVKRGSAEDAAFIMKNAGSVIIVPGYGMAVAQA 326
Cdd:pfam02233 236 GALVGASGAILTYIMCKAMNRSLTNVLFgGFGAAASAGAAGAAAADGEVKEISAEDAAELLAYASSVIIVPGYGMAVAQA 315

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033 327 QHALREMADELKHAGVKVSYAIHPVAGRMPGHMNVLLAEANVPYDEVFELEDINNEFQTADVAFVIGANDVTNPAAKTNP 406
Cdd:pfam02233 316 QHAVAELADLLEERGVEVRFAIHPVAGRMPGHMNVLLAEADVPYDIVLEMDEINDDFADTDVALVIGANDVVNPAARTDP 395

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1730658033 407 QSPIFGMPILEVEKARTVLFVKRSMASGYAGVENELFHRDNTMMLFGDAKKMVETIVKN 465
Cdd:pfam02233 396 GSPIYGMPILEVWKAKTVIVIKRSMGPGYAGVDNPLFYKDNTRMLFGDAKKSLEELVKA 454
pntB PRK09444
Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;
6-466 5.23e-179

Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;


Pssm-ID: 236520  Cd Length: 462  Bit Score: 508.87  E-value: 5.23e-179
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033   6 ESLTSLAYLVAAVLFIMALRGLSSPESSRRGNFFGMLGMAIAIVTTILSPAVTSYTWIVVALLIGAVIGIVIARKIAMTA 85
Cdd:PRK09444    3 GGLVTAAYIVAAILFIFSLAGLSKHETSRQGNNFGIAGMAIALIATIFGPDTGNVGWIIIAMVIGGAIGIRLAKKVEMTE 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033  86 MPQLVAAFHSLVGLAAVLVAGAAFSNPEAFgivnAAGEIYIASRIEMGLGVVIGAITFSGSVIAFTKLQGLVSGKPMVFG 165
Cdd:PRK09444   83 MPELVAILHSFVGLAAVLVGFNSYLDHDAG----MAPVLVNIHLTEVFLGIFIGAVTFTGSIVAFGKLRGKISSKPLMLP 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033 166 GQHLLNALIGAVIIGLIGYFC-VEQAPWVFWT---MTALAFVIGILLIIPIGGADMPVVVSMLNSYSGWAAAGIGFTLHN 241
Cdd:PRK09444  159 HRHKLNLAALVVSFLLLIVFVrTDSVGLQVFAlllMTLIALAFGWHLVASIGGADMPVVVSMLNSYSGWAAAAAGFMLSN 238

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033 242 DALIVTGALVGSSGAILSYIMCKGMNRSFFNVIL--GGFGADASAAAASGGEDRPVkrgSAEDAAFIMKNAGSVIIVPGY 319
Cdd:PRK09444  239 DLLIVTGALVGSSGAILSYIMCKAMNRSFISVIAggFGTDGSSTGDDEEVGEHRET---TAEEVAEMLKNSHSVIITPGY 315

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033 320 GMAVAQAQHALREMADELKHAGVKVSYAIHPVAGRMPGHMNVLLAEANVPYDEVFELEDINNEFQTADVAFVIGANDVTN 399
Cdd:PRK09444  316 GMAVAQAQYPVAEITEKLRARGINVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFADTDTVLVIGANDTVN 395

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1730658033 400 PAAKTNPQSPIFGMPILEVEKARTVLFVKRSMASGYAGVENELFHRDNTMMLFGDAKKMVETIVKNL 466
Cdd:PRK09444  396 PAAQEDPNSPIAGMPVLEVWKAQNVIVFKRSMNTGYAGVQNPLFFKENTQMLFGDAKASVDAILKAL 462
 
Name Accession Description Interval E-value
PntB COG1282
NAD/NADP transhydrogenase beta subunit [Energy production and conversion];
6-466 0e+00

NAD/NADP transhydrogenase beta subunit [Energy production and conversion];


Pssm-ID: 440893  Cd Length: 458  Bit Score: 704.14  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033   6 ESLTSLAYLVAAVLFIMALRGLSSPESSRRGNFFGMLGMAIAIVTTILSPAVTSYTWIVVALLIGAVIGIVIARKIAMTA 85
Cdd:COG1282     3 NTLITLAYLVAAVLFILGLKGLSSPETARRGNLLGAVGMLIAVVATLLLPGIVNYGLILAAIAIGGAIGAVLARKVEMTA 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033  86 MPQLVAAFHSLVGLAAVLVAGAAFSNPEAFgivnaAGEIYIASRIEMGLGVVIGAITFSGSVIAFTKLQGLVSGKPMVFG 165
Cdd:COG1282    83 MPQLVALFNGFGGLAAALVAAAELLEPGAL-----AGALPAIHLIEIVLGVLIGAVTFTGSLIAFGKLQGLISGKPITFP 157

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033 166 GQHLLNALIGAVIIGLIGYFCV-EQAPWVFWTMTALAFVIGILLIIPIGGADMPVVVSMLNSYSGWAAAGIGFTLHNDAL 244
Cdd:COG1282   158 GQHLLNLLLLLAIVALGVLFVVsPGSLLLLLLLTVLALLLGVLLVLPIGGADMPVVISLLNSYSGLAAAAAGFVLGNDLL 237

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033 245 IVTGALVGSSGAILSYIMCKGMNRSFFNVILGGFGADASAAAASGgEDRPVKRGSAEDAAFIMKNAGSVIIVPGYGMAVA 324
Cdd:COG1282   238 IIAGALVGASGAILTYIMCKAMNRSLINVLFGGFGGGGAAAAGAA-EQGEVKEISAEDAAILLAYASSVIIVPGYGMAVA 316

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033 325 QAQHALREMADELKHAGVKVSYAIHPVAGRMPGHMNVLLAEANVPYDEVFELEDINNEFQTADVAFVIGANDVTNPAAKT 404
Cdd:COG1282   317 QAQHAVRELADLLEERGVEVKFAIHPVAGRMPGHMNVLLAEANVPYDQLLEMDEINPEFAQTDVALVIGANDVVNPAART 396

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1730658033 405 NPQSPIFGMPILEVEKARTVLFVKRSMASGYAGVENELFHRDNTMMLFGDAKKMVETIVKNL 466
Cdd:COG1282   397 DPGSPIYGMPILEVDKAKTVIVIKRSMGPGYAGVENPLFYKDNTRMLFGDAKKSVEELVKAL 458
PNTB pfam02233
NAD(P) transhydrogenase beta subunit; This family corresponds to the beta subunit of NADP ...
 11-465 0e+00

NAD(P) transhydrogenase beta subunit; This family corresponds to the beta subunit of NADP transhydrogenase in prokaryotes, and either the protein N- or C terminal in eukaryotes. The domain is often found in conjunction with pfam01262. Pyridine nucleotide transhydrogenase catalyzes the reduction of NAD+ to NADPH. A complete loss of activity occurs upon mutation of Gly314 in E. coli.


Pssm-ID: 460502  Cd Length: 454  Bit Score: 666.46  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033  11 LAYLVAAVLFIMALRGLSSPESSRRGNFFGMLGMAIAIVTTIL---SPAVTSYTWIVVALLIGAVIGIVIARKIAMTAMP 87
Cdd:pfam02233   1 AAYLVAAVLFILGLKGLSSPKTARRGNLLGAIGMALAIVATLLlgaLADSLPYGLILIAIAIGGVIGLYIARRVKMTAMP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033  88 QLVAAFHSLVGLAAVLVAGAAFSNPEAFGIvnaagEIYIASRIEMGLGVVIGAITFSGSVIAFTKLQGLVSGKPMVFGGQ 167
Cdd:pfam02233  81 QLVALFHSLGGLAAVLVAIAEYLAPEAFGA-----GISAFHLVEIVLGVLIGAVTFTGSLIAFGKLQGLLSSKPLTLPGR 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033 168 HLLNALIGAVIIGLIGYFCVEQAPWVFWTMTALAFVIGILLIIPIGGADMPVVVSMLNSYSGWAAAGIGFTLHNDALIVT 247
Cdd:pfam02233 156 HLLNLLLLLAIVVLGVLFVAAPSSPGLWLLTALALLLGVLLVLPIGGADMPVVISLLNSYSGWAAAAAGFVLGNPLLIIA 235

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033 248 GALVGSSGAILSYIMCKGMNRSFFNVIL-GGFGADASAAAASGGEDRPVKRGSAEDAAFIMKNAGSVIIVPGYGMAVAQA 326
Cdd:pfam02233 236 GALVGASGAILTYIMCKAMNRSLTNVLFgGFGAAASAGAAGAAAADGEVKEISAEDAAELLAYASSVIIVPGYGMAVAQA 315

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033 327 QHALREMADELKHAGVKVSYAIHPVAGRMPGHMNVLLAEANVPYDEVFELEDINNEFQTADVAFVIGANDVTNPAAKTNP 406
Cdd:pfam02233 316 QHAVAELADLLEERGVEVRFAIHPVAGRMPGHMNVLLAEADVPYDIVLEMDEINDDFADTDVALVIGANDVVNPAARTDP 395

                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1730658033 407 QSPIFGMPILEVEKARTVLFVKRSMASGYAGVENELFHRDNTMMLFGDAKKMVETIVKN 465
Cdd:pfam02233 396 GSPIYGMPILEVWKAKTVIVIKRSMGPGYAGVDNPLFYKDNTRMLFGDAKKSLEELVKA 454
pntB PRK09444
Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;
6-466 5.23e-179

Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;


Pssm-ID: 236520  Cd Length: 462  Bit Score: 508.87  E-value: 5.23e-179
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033   6 ESLTSLAYLVAAVLFIMALRGLSSPESSRRGNFFGMLGMAIAIVTTILSPAVTSYTWIVVALLIGAVIGIVIARKIAMTA 85
Cdd:PRK09444    3 GGLVTAAYIVAAILFIFSLAGLSKHETSRQGNNFGIAGMAIALIATIFGPDTGNVGWIIIAMVIGGAIGIRLAKKVEMTE 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033  86 MPQLVAAFHSLVGLAAVLVAGAAFSNPEAFgivnAAGEIYIASRIEMGLGVVIGAITFSGSVIAFTKLQGLVSGKPMVFG 165
Cdd:PRK09444   83 MPELVAILHSFVGLAAVLVGFNSYLDHDAG----MAPVLVNIHLTEVFLGIFIGAVTFTGSIVAFGKLRGKISSKPLMLP 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033 166 GQHLLNALIGAVIIGLIGYFC-VEQAPWVFWT---MTALAFVIGILLIIPIGGADMPVVVSMLNSYSGWAAAGIGFTLHN 241
Cdd:PRK09444  159 HRHKLNLAALVVSFLLLIVFVrTDSVGLQVFAlllMTLIALAFGWHLVASIGGADMPVVVSMLNSYSGWAAAAAGFMLSN 238

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033 242 DALIVTGALVGSSGAILSYIMCKGMNRSFFNVIL--GGFGADASAAAASGGEDRPVkrgSAEDAAFIMKNAGSVIIVPGY 319
Cdd:PRK09444  239 DLLIVTGALVGSSGAILSYIMCKAMNRSFISVIAggFGTDGSSTGDDEEVGEHRET---TAEEVAEMLKNSHSVIITPGY 315

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1730658033 320 GMAVAQAQHALREMADELKHAGVKVSYAIHPVAGRMPGHMNVLLAEANVPYDEVFELEDINNEFQTADVAFVIGANDVTN 399
Cdd:PRK09444  316 GMAVAQAQYPVAEITEKLRARGINVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFADTDTVLVIGANDTVN 395

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1730658033 400 PAAKTNPQSPIFGMPILEVEKARTVLFVKRSMASGYAGVENELFHRDNTMMLFGDAKKMVETIVKNL 466
Cdd:PRK09444  396 PAAQEDPNSPIAGMPVLEVWKAQNVIVFKRSMNTGYAGVQNPLFFKENTQMLFGDAKASVDAILKAL 462
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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