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Conserved domains on  [gi|1712818179|gb|QDW05510|]
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glycerol-3-phosphate 1-O-acyltransferase PlsY [Bacillus sp. KBS0812]

Protein Classification

glycerol-3-phosphate acyltransferase( domain architecture ID 10011319)

glycerol-3-phosphate acyltransferase catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA)

EC:  2.3.1.-
Gene Ontology:  GO:0043772|GO:0006654|GO:0008654
PubMed:  19038363
TCDB:  9.B.31

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK00220 PRK00220
glycerol-3-phosphate 1-O-acyltransferase PlsY;
1-192 1.22e-78

glycerol-3-phosphate 1-O-acyltransferase PlsY;


:

Pssm-ID: 234691 [Multi-domain]  Cd Length: 198  Bit Score: 233.13  E-value: 1.22e-78
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179   1 MLIALLIILAYLIGSIPSGLIVGKLAKGIDIREHGSGNLGATNAFRTLGVKAGSVVIAGDILKGTLATALPFLMHVD-IH 79
Cdd:PRK00220    3 MIALLLILLAYLLGSIPFALLVGKLFGLPDPREHGSGNPGATNVLRIGGKKAAIATLLGDALKGTLAVLLAYLFGLDpIS 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179  80 PLLAGVFAVLGHVFPIFAKFKGGKAVATSGGVLLFYAPLLFITMVAVFFIFLYLTKFVSLSSMLTGIYTVIYSFFVH-DT 158
Cdd:PRK00220   83 LGLIALAAVLGHIFPVFFKFKGGKGVATAAGVLLGIGPLLALILAATWLLVALLTRYSSLAALVAALIAPIYVWWFPpDW 162

                         170       180       190
                  ....*....|....*....|....*....|....
gi 1712818179 159 YLLIVVTLLTIFVIYRHRANIKRIINKTEPKVKW 192
Cdd:PRK00220  163 QFTIPVALLSVLIIYRHRDNIQRLLAGTESKIGW 196
 
Name Accession Description Interval E-value
PRK00220 PRK00220
glycerol-3-phosphate 1-O-acyltransferase PlsY;
1-192 1.22e-78

glycerol-3-phosphate 1-O-acyltransferase PlsY;


Pssm-ID: 234691 [Multi-domain]  Cd Length: 198  Bit Score: 233.13  E-value: 1.22e-78
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179   1 MLIALLIILAYLIGSIPSGLIVGKLAKGIDIREHGSGNLGATNAFRTLGVKAGSVVIAGDILKGTLATALPFLMHVD-IH 79
Cdd:PRK00220    3 MIALLLILLAYLLGSIPFALLVGKLFGLPDPREHGSGNPGATNVLRIGGKKAAIATLLGDALKGTLAVLLAYLFGLDpIS 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179  80 PLLAGVFAVLGHVFPIFAKFKGGKAVATSGGVLLFYAPLLFITMVAVFFIFLYLTKFVSLSSMLTGIYTVIYSFFVH-DT 158
Cdd:PRK00220   83 LGLIALAAVLGHIFPVFFKFKGGKGVATAAGVLLGIGPLLALILAATWLLVALLTRYSSLAALVAALIAPIYVWWFPpDW 162

                         170       180       190
                  ....*....|....*....|....*....|....
gi 1712818179 159 YLLIVVTLLTIFVIYRHRANIKRIINKTEPKVKW 192
Cdd:PRK00220  163 QFTIPVALLSVLIIYRHRDNIQRLLAGTESKIGW 196
TIGR00023 TIGR00023
acyl-phosphate glycerol 3-phosphate acyltransferase; This model represents the full length of ...
 1-193 9.83e-77

acyl-phosphate glycerol 3-phosphate acyltransferase; This model represents the full length of acylphosphate:glycerol 3-phosphate acyltransferase, and integral membrane protein about 200 amino acids in length, called PlsY in Streptococcus pneumoniae, YneS in Bacillus subtilis, and YgiH in E. coli. It is found in a single copy in a large number of bacteria, including the Mycoplasmas but not Mycobacteria or spirochetes, for example. Its partner is PlsX (see TIGR00182), and the pair can replace PlsB for synthesizing 1-acylglycerol-3-phosphate. [Fatty acid and phospholipid metabolism, Biosynthesis]


Pssm-ID: 272860 [Multi-domain]  Cd Length: 196  Bit Score: 228.01  E-value: 9.83e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179   1 MLIALLIILAYLIGSIPSGLIVGKLAKGIDIREHGSGNLGATNAFRTLGVKAGSVVIAGDILKGTLATALPFLMHV-DIH 79
Cdd:TIGR00023   3 LLIVFLLLIGYLIGSIPFAYLVGKILKGIDIREHGSGNPGATNVLRTLGVKAALLVLIFDILKGMLAVALSFLLGLfDFL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179  80 PLLAGVFAVLGHVFPIFAKFKGGKAVATSGGVLLFYAPLLFITMVAVFFIFLYLTKFVSLSSMLTGIYTVIYSFFVHDTY 159
Cdd:TIGR00023  83 PGLVAIAAVLGHIFPIFFKFKGGKGVATSGGSLLPISPWLFLIMLATWLFVTLVTKYVSLSSIVTAIVLPFYVLWFHLPY 162

                         170       180       190
                  ....*....|....*....|....*....|....
gi 1712818179 160 LLIVVTLLTIFVIYRHRANIKRIINKTEPKVKWL 193
Cdd:TIGR00023 163 LYIPVTLLLIFVIYRHRANIQRLLNGTEPKVWQK 196
PlsY COG0344
Phospholipid biosynthesis protein PlsY, probable glycerol-3-phosphate acyltransferase [Lipid ...
 1-191 2.29e-72

Phospholipid biosynthesis protein PlsY, probable glycerol-3-phosphate acyltransferase [Lipid transport and metabolism];


Pssm-ID: 440113 [Multi-domain]  Cd Length: 194  Bit Score: 216.88  E-value: 2.29e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179   1 MLIALLIILAYLIGSIPSGLIVGKLAKGIDIREHGSGNLGATNAFRTLGVKAGSVVIAGDILKGTLATALP-FLMHVDIH 79
Cdd:COG0344     2 MLLLLLLLLAYLLGSIPFGYLVGKLFGGIDIREHGSGNIGATNVLRVLGKKAGLLVLLLDALKGALAVLLArLLGGGPLL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179  80 PLLAGVFAVLGHVFPIFAKFKGGKAVATSGGVLLFYAPLLFITMVAVFFIFLYLTKFVSLSSMLTGIYTVIYSFFVH-DT 158
Cdd:COG0344    82 LLLAGLAAVLGHNFPVFLGFKGGKGVATALGVLLALSPLVGLIALAVWLLVLLLTRYVSLGSLVAALAAPILALLLGgPL 161

                         170       180       190
                  ....*....|....*....|....*....|...
gi 1712818179 159 YLLIVVTLLTIFVIYRHRANIKRIINKTEPKVK 191
Cdd:COG0344   162 ALLLLALLLALLVIYRHRSNIKRLLAGTESKIG 194
G3P_acyltransf pfam02660
Glycerol-3-phosphate acyltransferase; This family of enzymes catalyzes the transfer of an acyl ...
 9-182 1.08e-61

Glycerol-3-phosphate acyltransferase; This family of enzymes catalyzes the transfer of an acyl group from acyl-ACP to glycerol-3-phosphate to form lysophosphatidic acid.


Pssm-ID: 460641 [Multi-domain]  Cd Length: 174  Bit Score: 189.24  E-value: 1.08e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179   9 LAYLIGSIPSGLIVGKLAKGIDIREHGSGNLGATNAFRTLGVKAGSVVIAGDILKGTLATALP-FLMHVDIHPLLAGVFA 87
Cdd:pfam02660   1 IAYLLGSIPFGYLIGKLLKGIDIREYGSGNPGATNVLRVLGKKAGILVLLLDALKGVLAVLLArLLFGGLLLELLAGLAA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179  88 VLGHVFPIFAKFKGGKAVATSGGVLLFYAPLLFITMVAVFFIFLYLTKFVSLSSMLTGIYTVIYSFFVHDTYLLIVVtLL 167
Cdd:pfam02660  81 VLGHNFPVFLGFKGGKGVATTLGVLLALSPWDALIALAVFLLVLALTRYVSLGSLVAALLLPILLLLFGLPLVIFAL-LL 159

                         170
                  ....*....|....*
gi 1712818179 168 TIFVIYRHRANIKRI 182
Cdd:pfam02660 160 ALLVIWRHRENIKRL 174
 
Name Accession Description Interval E-value
PRK00220 PRK00220
glycerol-3-phosphate 1-O-acyltransferase PlsY;
1-192 1.22e-78

glycerol-3-phosphate 1-O-acyltransferase PlsY;


Pssm-ID: 234691 [Multi-domain]  Cd Length: 198  Bit Score: 233.13  E-value: 1.22e-78
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179   1 MLIALLIILAYLIGSIPSGLIVGKLAKGIDIREHGSGNLGATNAFRTLGVKAGSVVIAGDILKGTLATALPFLMHVD-IH 79
Cdd:PRK00220    3 MIALLLILLAYLLGSIPFALLVGKLFGLPDPREHGSGNPGATNVLRIGGKKAAIATLLGDALKGTLAVLLAYLFGLDpIS 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179  80 PLLAGVFAVLGHVFPIFAKFKGGKAVATSGGVLLFYAPLLFITMVAVFFIFLYLTKFVSLSSMLTGIYTVIYSFFVH-DT 158
Cdd:PRK00220   83 LGLIALAAVLGHIFPVFFKFKGGKGVATAAGVLLGIGPLLALILAATWLLVALLTRYSSLAALVAALIAPIYVWWFPpDW 162

                         170       180       190
                  ....*....|....*....|....*....|....
gi 1712818179 159 YLLIVVTLLTIFVIYRHRANIKRIINKTEPKVKW 192
Cdd:PRK00220  163 QFTIPVALLSVLIIYRHRDNIQRLLAGTESKIGW 196
TIGR00023 TIGR00023
acyl-phosphate glycerol 3-phosphate acyltransferase; This model represents the full length of ...
 1-193 9.83e-77

acyl-phosphate glycerol 3-phosphate acyltransferase; This model represents the full length of acylphosphate:glycerol 3-phosphate acyltransferase, and integral membrane protein about 200 amino acids in length, called PlsY in Streptococcus pneumoniae, YneS in Bacillus subtilis, and YgiH in E. coli. It is found in a single copy in a large number of bacteria, including the Mycoplasmas but not Mycobacteria or spirochetes, for example. Its partner is PlsX (see TIGR00182), and the pair can replace PlsB for synthesizing 1-acylglycerol-3-phosphate. [Fatty acid and phospholipid metabolism, Biosynthesis]


Pssm-ID: 272860 [Multi-domain]  Cd Length: 196  Bit Score: 228.01  E-value: 9.83e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179   1 MLIALLIILAYLIGSIPSGLIVGKLAKGIDIREHGSGNLGATNAFRTLGVKAGSVVIAGDILKGTLATALPFLMHV-DIH 79
Cdd:TIGR00023   3 LLIVFLLLIGYLIGSIPFAYLVGKILKGIDIREHGSGNPGATNVLRTLGVKAALLVLIFDILKGMLAVALSFLLGLfDFL 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179  80 PLLAGVFAVLGHVFPIFAKFKGGKAVATSGGVLLFYAPLLFITMVAVFFIFLYLTKFVSLSSMLTGIYTVIYSFFVHDTY 159
Cdd:TIGR00023  83 PGLVAIAAVLGHIFPIFFKFKGGKGVATSGGSLLPISPWLFLIMLATWLFVTLVTKYVSLSSIVTAIVLPFYVLWFHLPY 162

                         170       180       190
                  ....*....|....*....|....*....|....
gi 1712818179 160 LLIVVTLLTIFVIYRHRANIKRIINKTEPKVKWL 193
Cdd:TIGR00023 163 LYIPVTLLLIFVIYRHRANIQRLLNGTEPKVWQK 196
PlsY COG0344
Phospholipid biosynthesis protein PlsY, probable glycerol-3-phosphate acyltransferase [Lipid ...
 1-191 2.29e-72

Phospholipid biosynthesis protein PlsY, probable glycerol-3-phosphate acyltransferase [Lipid transport and metabolism];


Pssm-ID: 440113 [Multi-domain]  Cd Length: 194  Bit Score: 216.88  E-value: 2.29e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179   1 MLIALLIILAYLIGSIPSGLIVGKLAKGIDIREHGSGNLGATNAFRTLGVKAGSVVIAGDILKGTLATALP-FLMHVDIH 79
Cdd:COG0344     2 MLLLLLLLLAYLLGSIPFGYLVGKLFGGIDIREHGSGNIGATNVLRVLGKKAGLLVLLLDALKGALAVLLArLLGGGPLL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179  80 PLLAGVFAVLGHVFPIFAKFKGGKAVATSGGVLLFYAPLLFITMVAVFFIFLYLTKFVSLSSMLTGIYTVIYSFFVH-DT 158
Cdd:COG0344    82 LLLAGLAAVLGHNFPVFLGFKGGKGVATALGVLLALSPLVGLIALAVWLLVLLLTRYVSLGSLVAALAAPILALLLGgPL 161

                         170       180       190
                  ....*....|....*....|....*....|...
gi 1712818179 159 YLLIVVTLLTIFVIYRHRANIKRIINKTEPKVK 191
Cdd:COG0344   162 ALLLLALLLALLVIYRHRSNIKRLLAGTESKIG 194
G3P_acyltransf pfam02660
Glycerol-3-phosphate acyltransferase; This family of enzymes catalyzes the transfer of an acyl ...
 9-182 1.08e-61

Glycerol-3-phosphate acyltransferase; This family of enzymes catalyzes the transfer of an acyl group from acyl-ACP to glycerol-3-phosphate to form lysophosphatidic acid.


Pssm-ID: 460641 [Multi-domain]  Cd Length: 174  Bit Score: 189.24  E-value: 1.08e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179   9 LAYLIGSIPSGLIVGKLAKGIDIREHGSGNLGATNAFRTLGVKAGSVVIAGDILKGTLATALP-FLMHVDIHPLLAGVFA 87
Cdd:pfam02660   1 IAYLLGSIPFGYLIGKLLKGIDIREYGSGNPGATNVLRVLGKKAGILVLLLDALKGVLAVLLArLLFGGLLLELLAGLAA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179  88 VLGHVFPIFAKFKGGKAVATSGGVLLFYAPLLFITMVAVFFIFLYLTKFVSLSSMLTGIYTVIYSFFVHDTYLLIVVtLL 167
Cdd:pfam02660  81 VLGHNFPVFLGFKGGKGVATTLGVLLALSPWDALIALAVFLLVLALTRYVSLGSLVAALLLPILLLLFGLPLVIFAL-LL 159

                         170
                  ....*....|....*
gi 1712818179 168 TIFVIYRHRANIKRI 182
Cdd:pfam02660 160 ALLVIWRHRENIKRL 174
PRK14419 PRK14419
membrane protein; Provisional
 1-190 3.33e-48

membrane protein; Provisional


Pssm-ID: 237709 [Multi-domain]  Cd Length: 199  Bit Score: 155.90  E-value: 3.33e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179   1 MLIALLIILAYLIGSIPSGLIVGKLAKGIDIREHGSGNLGATNAFRTLGVKAGSVVIAGDILKGTLATALP-FLMHVDIH 79
Cdd:PRK14419    2 LMALLIILLAYLLGSFPSGYLAGRWLKGIDLREIGSGSTGATNVLRNVGKGPALFVFIIDVGKGVLAVLLAyALGLQPWL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179  80 PLLAGVFAVLGHVFPIFAKFKGGKAVATSGGVLLFYAPLLFITMVAVFFIFLYLTKFVSLSSMLTGIYTVIYSFFVHDTY 159
Cdd:PRK14419   82 QVLAGLAALLGHIWPVWLGFKGGKAVATGLGMLLALSWPVGLASLGIFLIVLALSRIVSLSSISAAIALPLLMFLLNIPL 161

                         170       180       190
                  ....*....|....*....|....*....|..
gi 1712818179 160 L-LIVVTLLTIFVIYRHRANIKRIINKTEPKV 190
Cdd:PRK14419  162 PyILFSLAAGLLVIWRHRSNIERLLAGTEPKI 193
PRK14405 PRK14405
membrane protein; Provisional
 1-190 3.01e-36

membrane protein; Provisional


Pssm-ID: 237706  Cd Length: 202  Bit Score: 125.22  E-value: 3.01e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179   1 MLIALLIILAYLIGSIPSGLIVGKLAKGIDIREHGSGNLGATNAFRTLGVKAGSVVIAGDILKGTLATALPFLM---HVD 77
Cdd:PRK14405    2 ILLLLAVVLSYLLGSVSFSYLIAKKIKGIDIRQHGSGNAGATNTLRVLGKGPAILVLLLDVVKGIAAVWIGRLLtgdGAA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179  78 IHPLLAGVFAVLGHVFPIFAKFKGGKAVATSGGVLLFYAPLLFITMVAVFFIFLYLTKFVSLSSMLTGIYTVIYSFFVHD 157
Cdd:PRK14405   82 WFPALAGLAAIIGHNWPIYFGFRGGKGIATTIGVVATLVFLPALIAGVIAIISIVITRYVSLGSLLFVTLTPVLLYIFDY 161

                         170       180       190
                  ....*....|....*....|....*....|....
gi 1712818179 158 TYLLIVVTL-LTIFVIYRHRANIKRIINKTEPKV 190
Cdd:PRK14405  162 PIPYIWLSLiIAIFAFWRHRTNIVRLLSGTENKL 195
PRK14397 PRK14397
membrane protein; Provisional
 1-187 5.61e-30

membrane protein; Provisional


Pssm-ID: 237700  Cd Length: 222  Bit Score: 109.56  E-value: 5.61e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179   1 MLIALLIILAYLIGSIPSGLIVGKLAKGIDIREHGSGNLGATNAFRTLGVKAGSVVIAGDILKGTLATALPF-LMHVDIH 79
Cdd:PRK14397    1 MGSLLWIATAYVMGSIPFGLVFARTFCGIDPRTGGSRNVGATNVARLCGTKWGVLTLVCDVLKGAVPVAVAMsISDSPVF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179  80 PLLAGVFAVLGHVFPIFAKFKGGKAVATSGGVLLFYA--PLLFITMVAVFFIflYLTKFVSLSSmLTGIYTVIYSFFVHD 157
Cdd:PRK14397   81 HSLTALAALLGHLYSCFLGFRGGKAVATTIGVFIPLAfwQLLLSGILCLLVI--WRSGFVSLGS-LTLVTALPVMLLITG 157

                         170       180       190
                  ....*....|....*....|....*....|.
gi 1712818179 158 TYLLIVVTLLTIFVIY-RHRANIKRIINKTE 187
Cdd:PRK14397  158 KWKLIPLALVVMALVYwSHRENIGRLARGEE 188
PRK14414 PRK14414
glycerol-3-phosphate acyltransferase;
1-186 1.60e-25

glycerol-3-phosphate acyltransferase;


Pssm-ID: 184665  Cd Length: 210  Bit Score: 98.04  E-value: 1.60e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179   1 MLIALLIILAYLIGSIPSGLIVGKLAKGIDIREHGSGNLGATNAFRTLGVKAGSVVIAGDILKGTLATALP-FLMHVDIH 79
Cdd:PRK14414    5 IMVIIALIAAYFIGSTPAPYLAGRIFKGIDIRTVGSKNMGSMNVFYNVGFWPGILVLAVDIGKGALAMAVAnWLGEGLGI 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179  80 PLLAGVFAVLGHVFPIFAKFKGGKAVATSGGVLLFYAPLLFITMVAVFFIFLYLTKFVSLSSMLTGIYTVIYSFFVHDTY 159
Cdd:PRK14414   85 QMLCALMAIAGHNYPVWLKFKGGKGGATAIGILAYMMPEGIPIYIACFLILMAITRFPTLSYGISFISFILVAWLGQHDM 164

                         170       180
                  ....*....|....*....|....*...
gi 1712818179 160 LLIVVTLLTIFV-IYRHRANIKRIINKT 186
Cdd:PRK14414  165 GKVLFSLLVVMIpILMYIPRMKEIKNKA 192
PRK14417 PRK14417
membrane protein; Provisional
 5-172 1.09e-24

membrane protein; Provisional


Pssm-ID: 184668  Cd Length: 232  Bit Score: 96.02  E-value: 1.09e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179   5 LLIILAYLIGSIPSGLIVGKLAKGIDIREHGSGNLGATNAFRTLGVKAGSVVIAGDILKGTLATALPFLMHVDIHP-LLA 83
Cdd:PRK14417    7 IMIPAGYLVGAIPMAYLLSRWRRGIDIRRYGSGNVGASNVIKTAGKRLGLAVFVFDVSKGALMILLAGWLGLELWQqIVV 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179  84 GVFAVLGHVFPIFAKFKGGKAVATSGGVLLFYAPLLFITMVAVFFIFLYLTKF-------VSLSSMLTGIYtviYSFFVH 156
Cdd:PRK14417   87 GLATIAGHNWPVFLRFNGGRGIATSLGVALVMAPVPALIALSTALTFGFFKKMapgvflgVGALPVMSGYF---HGFFGV 163

                         170
                  ....*....|....*.
gi 1712818179 157 DTYLLIVVTLLTIFVI 172
Cdd:PRK14417  164 QEPQTVTWGFIGIFLI 179
PRK14399 PRK14399
membrane protein; Provisional
 3-188 1.29e-20

membrane protein; Provisional


Pssm-ID: 237702  Cd Length: 258  Bit Score: 86.07  E-value: 1.29e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179   3 IALLIILAYLIGSIPSGLIVGKLAKGIDIREHGSGNLGATNAFRTLGVKAGSVVIAGDILKGTLATALPFLMHVDIHPLL 82
Cdd:PRK14399   11 IILASVFGYFLGSISWSIIIVKKVGNIDIRTVGSGNPGATNTVRILGKKWGLVVAFLDALKVLFTAIFAILLSMIPNELF 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179  83 AG-------VFAVLGHVFPIFAKFKGGKAVATSGGVLLFYAPLLFITMVAVFFIFLYLTKFVSLSSM------------- 142
Cdd:PRK14399   91 SQtsyfipcIFALIGHCWPIYYKFKGGKAVSCFLGLLFVVNYLYLIIFLIVWFISVAISRKVSVASIfsaatillimwip 170

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1712818179 143 -LTGIYTVIYSFFVHDTYLL-----IVVTLLTIF-------------------------VIYRHRANIKRIINKTEP 188
Cdd:PRK14399  171 yLYGVSYFIWQWNGLESFIVawknyILFSLLNSFhywfsniwasgmlegniiiliggliLVVRHSQNIKRIKNKTEP 247
PRK14416 PRK14416
membrane protein; Provisional
 12-155 2.56e-19

membrane protein; Provisional


Pssm-ID: 184667  Cd Length: 200  Bit Score: 81.45  E-value: 2.56e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179  12 LIGSIPSGLIVGKLAKGIDIREHGSGNLGATNAFRTLGVKAGSVVIAGDILKGTLA--TALPFLMHVDIHPLLAGVFAVL 89
Cdd:PRK14416    1 LLGSIPSAYLVTRRLTGRDIRQMGGGNVGGLNTFREVGTGAGIAVVFIDLVKGALAvsVSYYLLTQNAQWVILTGFAAVI 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1712818179  90 GHVFPIFAKFKGGKAVATSGGVLLFYAPL-----LFITMVAVFFIFLYLTKFVSLSsmlTGIYTVIYSFFV 155
Cdd:PRK14416   81 GHNWSVWLDFKGGKGLGPAFGAMLFLLPVyglpqQLGILALLVFIPLALTRNIALA---TGIALFSLPFLV 148
PRK14401 PRK14401
membrane protein; Provisional
 4-167 1.86e-16

membrane protein; Provisional


Pssm-ID: 184658  Cd Length: 187  Bit Score: 73.62  E-value: 1.86e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179   4 ALLIILAYLIGSIPSGLIVGKlAKGIDIREHGSGnlGATNAFRTLGVKAGSVVIAGDILKGTLATALPFLMHVDIhPLLA 83
Cdd:PRK14401    3 LLVAVLAYLLGSLVAGVLYSR-ARGEDIRERDLP--GGSGTYRQFGPGAALLVAAADILKGVAAALLARWLAPPA-TWLA 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179  84 GVFAVLGHVFPIFAKFKGGKAVATSGGVLLFYAPLLFITMVAVFFIFLYLTKFVSLSSMLTGIYTVIYSFFVHDTYLLIV 163
Cdd:PRK14401   79 GAAVVAGHCWPVFFRFRGGGGIAPTLGFFLVLAPGTTLGTVAFGLAVAGLYRALLWRQRRKGLYPIPFGAVVGYPVGLLV 158


                  ....
gi 1712818179 164 VTLL 167
Cdd:PRK14401  159 ATRS 162
PRK14411 PRK14411
membrane protein; Provisional
 7-179 1.93e-13

membrane protein; Provisional


Pssm-ID: 184663  Cd Length: 204  Bit Score: 65.57  E-value: 1.93e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179   7 IILAYLIGSIPSGLIVGKLAKGIDIREHGSGNLGATNAFRTLGVKAGSVVIAGDILKGTLATALP-FLMHVDIHPLLAGV 85
Cdd:PRK14411    7 TLIGYVFGNFLTAMIVGKIFLHKDPTKYGSGNPGTANMGAVFGKKWGILTCIGDLLKTLIALFIVyFIYHGHLNIAYAGL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1712818179  86 FAVLGHVFPIFAKFKGGKAVATSGGVLLFYApllFITMVAVFFIFLYLTKFVSLSSMLTGIYTVIYSF--FVHDTYLLIV 163
Cdd:PRK14411   87 GVVLGHCFPIWNHFKGGKGVAVTAQVAVFYD---WRAGLITLLIALVLTAIMQNLTIPPLVFMLLFSIytFWNNQEAGLV 163

                         170
                  ....*....|....*.
gi 1712818179 164 VTLLTIFVIYRHRANI 179
Cdd:PRK14411  164 FLIITLIMIFKFRKDI 179
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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