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Conserved domains on  [gi|1702124957|gb|QDK89488|]
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putative motility protein [Bacillus velezensis]

Protein Classification

YjfB family protein( domain architecture ID 10624054)

YjfB family protein is a putative motility protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
YjfB_motility pfam14070
Putative motility protein; This family of proteins is regulated in B. subtilis by SigD, and is ...
 3-56 6.93e-06

Putative motility protein; This family of proteins is regulated in B. subtilis by SigD, and is likely to be involved in motility or flagellin production, Proteins in this family are approximately 60 amino acids in length, and contain two highly conserved asparagine residues.


:

Pssm-ID: 464079  Cd Length: 57  Bit Score: 38.34  E-value: 6.93e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 1702124957  3 IPALSIAMHQSSLAQNVNIALTKTVMQHAQAAAEETVKMLPSQ---HPTAGHSIDVK 56
Cdd:pfam14070  1 IAALSTAMSQAKLQQQVSIAVLKKALDTQEEQGAQLLKMMEMEqsvNPNLGQNIDVT 57
 
Name Accession Description Interval E-value
YjfB_motility pfam14070
Putative motility protein; This family of proteins is regulated in B. subtilis by SigD, and is ...
 3-56 6.93e-06

Putative motility protein; This family of proteins is regulated in B. subtilis by SigD, and is likely to be involved in motility or flagellin production, Proteins in this family are approximately 60 amino acids in length, and contain two highly conserved asparagine residues.


Pssm-ID: 464079  Cd Length: 57  Bit Score: 38.34  E-value: 6.93e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 1702124957  3 IPALSIAMHQSSLAQNVNIALTKTVMQHAQAAAEETVKMLPSQ---HPTAGHSIDVK 56
Cdd:pfam14070  1 IAALSTAMSQAKLQQQVSIAVLKKALDTQEEQGAQLLKMMEMEqsvNPNLGQNIDVT 57
 
Name Accession Description Interval E-value
YjfB_motility pfam14070
Putative motility protein; This family of proteins is regulated in B. subtilis by SigD, and is ...
 3-56 6.93e-06

Putative motility protein; This family of proteins is regulated in B. subtilis by SigD, and is likely to be involved in motility or flagellin production, Proteins in this family are approximately 60 amino acids in length, and contain two highly conserved asparagine residues.


Pssm-ID: 464079  Cd Length: 57  Bit Score: 38.34  E-value: 6.93e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 1702124957  3 IPALSIAMHQSSLAQNVNIALTKTVMQHAQAAAEETVKMLPSQ---HPTAGHSIDVK 56
Cdd:pfam14070  1 IAALSTAMSQAKLQQQVSIAVLKKALDTQEEQGAQLLKMMEMEqsvNPNLGQNIDVT 57
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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