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Conserved domains on  [gi|1633340465|gb|QCK30059|]
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PTS sugar transporter subunit IIA [Streptococcus pyogenes]

Protein Classification

PTS sugar transporter subunit IIA( domain architecture ID 10006772)

PTS mannose/fructose/sorbose family sugar transporter subunit IIA is part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), which catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
AgaF super family cl48991
PTS galactosamine/N-acetylgalactosamine transporter subunit IIA;
1-145 3.84e-39

PTS galactosamine/N-acetylgalactosamine transporter subunit IIA;


The actual alignment was detected with superfamily member NF040761:

Pssm-ID: 468721  Cd Length: 144  Bit Score: 128.75  E-value: 3.84e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1633340465   1 MIAIIVMGHGHFASGIVSALELIARQQEKVTAIDFTAEMTAADVQDQLSRAL--IPEEETLV-LCDLLGGTPFKVAATLM 77
Cdd:NF040761    1 MIGIILTGHGGFASGLESAVEQIIGEQPQFIAIDFPESMSTAQLEAQLEQALaeLDSGEGVVfLTDLLGGSPFRVASTLA 80
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1633340465  78 ESLPNttCNVLSGLNLAMLIEASFARQtAASFDDLVSGLITCSKEGIVD-WKTLSQQEDGTTDDElgGI 145
Cdd:NF040761   81 LQRPN--IEVITGTNLQMLLEMLLERD-GLSLEEFRDQALECGHRGITSlADELQKKREAEEEED--GI 144
 
Name Accession Description Interval E-value
AgaF NF040761
PTS galactosamine/N-acetylgalactosamine transporter subunit IIA;
1-145 3.84e-39

PTS galactosamine/N-acetylgalactosamine transporter subunit IIA;


Pssm-ID: 468721  Cd Length: 144  Bit Score: 128.75  E-value: 3.84e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1633340465   1 MIAIIVMGHGHFASGIVSALELIARQQEKVTAIDFTAEMTAADVQDQLSRAL--IPEEETLV-LCDLLGGTPFKVAATLM 77
Cdd:NF040761    1 MIGIILTGHGGFASGLESAVEQIIGEQPQFIAIDFPESMSTAQLEAQLEQALaeLDSGEGVVfLTDLLGGSPFRVASTLA 80
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1633340465  78 ESLPNttCNVLSGLNLAMLIEASFARQtAASFDDLVSGLITCSKEGIVD-WKTLSQQEDGTTDDElgGI 145
Cdd:NF040761   81 LQRPN--IEVITGTNLQMLLEMLLERD-GLSLEEFRDQALECGHRGITSlADELQKKREAEEEED--GI 144
PTS_IIA_man cd00006
PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: ...
2-122 1.50e-36

PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.


Pssm-ID: 237978 [Multi-domain]  Cd Length: 122  Bit Score: 121.56  E-value: 1.50e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1633340465   2 IAIIVMGHGHFASGIVSALELIARQQEKVTAIDFTAEMTAADVQDQLSRALIP---EEETLVLCDLLGGTPFKVAATLME 78
Cdd:cd00006     1 VGIIIATHGGFASGLLNSAEMILGEQENVEAIDFPPGESPDDLLEKIKAALAEldsGEGVLILTDLFGGSPNNAAARLSM 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 1633340465  79 SLPNttCNVLSGLNLAMLIEASFARQTAASFDDLVSGLITCSKE 122
Cdd:cd00006    81 EHPP--VEVIAGVNLPMLLEAARARELGLSLDELVENALEAGRE 122
ManX COG2893
Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and ...
4-128 5.09e-36

Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism];


Pssm-ID: 442138 [Multi-domain]  Cd Length: 126  Bit Score: 120.24  E-value: 5.09e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1633340465   4 IIVMGHGHFASGIVSALELIARQQEKVTAIDFTAEMTAADVQDQLSRALI---PEEETLVLCDLLGGTPFKVAATLMESL 80
Cdd:COG2893     1 IVIATHGPLAEGLLSSAEMILGEQENVEAVDLYPGDDPEDLREKLEEAIAeldSGDGVLILTDLFGGTPSNVAARLLAKH 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1633340465  81 PNttCNVLSGLNLAMLIEASFARQTaASFDDLVSGLITCSKEGIVDWK 128
Cdd:COG2893    81 EN--VEVIAGVNLPMLLEALTYRED-LSLDELVEKALEAGREGIKSLS 125
EIIA-man pfam03610
PTS system fructose IIA component;
3-112 1.33e-20

PTS system fructose IIA component;


Pssm-ID: 427399 [Multi-domain]  Cd Length: 113  Bit Score: 80.76  E-value: 1.33e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1633340465   3 AIIVMGHGHFASGIVSALELIARQQEKVTAIDFT----AEMTAADVQDQLsRALIPEEETLVLCDLLGGTPFKVAATLME 78
Cdd:pfam03610   1 GIVIVSHGELAEGLLELAEMMAGEQENVIAVGGTpgesIGTSFEKIVEAI-ENLDSGDGVLVLVDLGGATPNNEAALELL 79
                          90       100       110
                  ....*....|....*....|....*....|....
gi 1633340465  79 SLPNttCNVLSGLNLAMLIEASFARQTAASFDDL 112
Cdd:pfam03610  80 EKER--MEVITGVNLPMVEGAYAARVSASLGELV 111
PRK15088 PRK15088
PTS system mannose-specific transporter subunits IIAB; Provisional
2-124 1.01e-14

PTS system mannose-specific transporter subunits IIAB; Provisional


Pssm-ID: 185045 [Multi-domain]  Cd Length: 322  Bit Score: 69.25  E-value: 1.01e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1633340465   2 IAIIVMGHGHFASGIVSALELIARQQEKVTAIDF----TAEMTAADVQDQLSRaLIPEEETLVLCDLLGGTPFKVAATLM 77
Cdd:PRK15088    3 IAIIIGTHGWAAEQLLKTAEMLLGEQENVAWIDFvpgeNAETLIEKYNAQLAK-LDTSKGVLFLVDTWGGSPFNAASRIV 81
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1633340465  78 ESLPNTtcNVLSGLNLAMLIEASFARQTAASFDDLVSGLITCSKEGI 124
Cdd:PRK15088   82 VDKENY--EVITGVNIPMLVETFMARDDDPSFDELVAIALETGREGV 126
 
Name Accession Description Interval E-value
AgaF NF040761
PTS galactosamine/N-acetylgalactosamine transporter subunit IIA;
1-145 3.84e-39

PTS galactosamine/N-acetylgalactosamine transporter subunit IIA;


Pssm-ID: 468721  Cd Length: 144  Bit Score: 128.75  E-value: 3.84e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1633340465   1 MIAIIVMGHGHFASGIVSALELIARQQEKVTAIDFTAEMTAADVQDQLSRAL--IPEEETLV-LCDLLGGTPFKVAATLM 77
Cdd:NF040761    1 MIGIILTGHGGFASGLESAVEQIIGEQPQFIAIDFPESMSTAQLEAQLEQALaeLDSGEGVVfLTDLLGGSPFRVASTLA 80
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1633340465  78 ESLPNttCNVLSGLNLAMLIEASFARQtAASFDDLVSGLITCSKEGIVD-WKTLSQQEDGTTDDElgGI 145
Cdd:NF040761   81 LQRPN--IEVITGTNLQMLLEMLLERD-GLSLEEFRDQALECGHRGITSlADELQKKREAEEEED--GI 144
PTS_IIA_man cd00006
PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: ...
2-122 1.50e-36

PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.


Pssm-ID: 237978 [Multi-domain]  Cd Length: 122  Bit Score: 121.56  E-value: 1.50e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1633340465   2 IAIIVMGHGHFASGIVSALELIARQQEKVTAIDFTAEMTAADVQDQLSRALIP---EEETLVLCDLLGGTPFKVAATLME 78
Cdd:cd00006     1 VGIIIATHGGFASGLLNSAEMILGEQENVEAIDFPPGESPDDLLEKIKAALAEldsGEGVLILTDLFGGSPNNAAARLSM 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 1633340465  79 SLPNttCNVLSGLNLAMLIEASFARQTAASFDDLVSGLITCSKE 122
Cdd:cd00006    81 EHPP--VEVIAGVNLPMLLEAARARELGLSLDELVENALEAGRE 122
ManX COG2893
Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and ...
4-128 5.09e-36

Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism];


Pssm-ID: 442138 [Multi-domain]  Cd Length: 126  Bit Score: 120.24  E-value: 5.09e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1633340465   4 IIVMGHGHFASGIVSALELIARQQEKVTAIDFTAEMTAADVQDQLSRALI---PEEETLVLCDLLGGTPFKVAATLMESL 80
Cdd:COG2893     1 IVIATHGPLAEGLLSSAEMILGEQENVEAVDLYPGDDPEDLREKLEEAIAeldSGDGVLILTDLFGGTPSNVAARLLAKH 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1633340465  81 PNttCNVLSGLNLAMLIEASFARQTaASFDDLVSGLITCSKEGIVDWK 128
Cdd:COG2893    81 EN--VEVIAGVNLPMLLEALTYRED-LSLDELVEKALEAGREGIKSLS 125
EIIA-man pfam03610
PTS system fructose IIA component;
3-112 1.33e-20

PTS system fructose IIA component;


Pssm-ID: 427399 [Multi-domain]  Cd Length: 113  Bit Score: 80.76  E-value: 1.33e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1633340465   3 AIIVMGHGHFASGIVSALELIARQQEKVTAIDFT----AEMTAADVQDQLsRALIPEEETLVLCDLLGGTPFKVAATLME 78
Cdd:pfam03610   1 GIVIVSHGELAEGLLELAEMMAGEQENVIAVGGTpgesIGTSFEKIVEAI-ENLDSGDGVLVLVDLGGATPNNEAALELL 79
                          90       100       110
                  ....*....|....*....|....*....|....
gi 1633340465  79 SLPNttCNVLSGLNLAMLIEASFARQTAASFDDL 112
Cdd:pfam03610  80 EKER--MEVITGVNLPMVEGAYAARVSASLGELV 111
PRK15088 PRK15088
PTS system mannose-specific transporter subunits IIAB; Provisional
2-124 1.01e-14

PTS system mannose-specific transporter subunits IIAB; Provisional


Pssm-ID: 185045 [Multi-domain]  Cd Length: 322  Bit Score: 69.25  E-value: 1.01e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1633340465   2 IAIIVMGHGHFASGIVSALELIARQQEKVTAIDF----TAEMTAADVQDQLSRaLIPEEETLVLCDLLGGTPFKVAATLM 77
Cdd:PRK15088    3 IAIIIGTHGWAAEQLLKTAEMLLGEQENVAWIDFvpgeNAETLIEKYNAQLAK-LDTSKGVLFLVDTWGGSPFNAASRIV 81
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1633340465  78 ESLPNTtcNVLSGLNLAMLIEASFARQTAASFDDLVSGLITCSKEGI 124
Cdd:PRK15088   82 VDKENY--EVITGVNIPMLVETFMARDDDPSFDELVAIALETGREGV 126
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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