DNA-directed RNA polymerase II subunit one, partial [Suillus luteus]
List of domain hits
Name | Accession | Description | Interval | E-value | ||
RNA_pol_Rpb1_1 super family | cl29786 | RNA polymerase Rpb1, domain 1; RNA polymerases catalyze the DNA dependent polymerization of ... |
1-36 | 1.89e-04 | ||
RNA polymerase Rpb1, domain 1; RNA polymerases catalyze the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). This domain, domain 1, represents the clamp domain, which a mobile domain involved in positioning the DNA, maintenance of the transcription bubble and positioning of the nascent RNA strand. The actual alignment was detected with superfamily member pfam04997: Pssm-ID: 398595 Cd Length: 320 Bit Score: 36.11 E-value: 1.89e-04
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Name | Accession | Description | Interval | E-value | ||
RNA_pol_Rpb1_1 | pfam04997 | RNA polymerase Rpb1, domain 1; RNA polymerases catalyze the DNA dependent polymerization of ... |
1-36 | 1.89e-04 | ||
RNA polymerase Rpb1, domain 1; RNA polymerases catalyze the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). This domain, domain 1, represents the clamp domain, which a mobile domain involved in positioning the DNA, maintenance of the transcription bubble and positioning of the nascent RNA strand. Pssm-ID: 398595 Cd Length: 320 Bit Score: 36.11 E-value: 1.89e-04
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Name | Accession | Description | Interval | E-value | ||
RNA_pol_Rpb1_1 | pfam04997 | RNA polymerase Rpb1, domain 1; RNA polymerases catalyze the DNA dependent polymerization of ... |
1-36 | 1.89e-04 | ||
RNA polymerase Rpb1, domain 1; RNA polymerases catalyze the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). This domain, domain 1, represents the clamp domain, which a mobile domain involved in positioning the DNA, maintenance of the transcription bubble and positioning of the nascent RNA strand. Pssm-ID: 398595 Cd Length: 320 Bit Score: 36.11 E-value: 1.89e-04
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Blast search parameters | ||||
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