|
Name |
Accession |
Description |
Interval |
E-value |
| Arm_2 |
pfam04826 |
Armadillo-like; This domain contains armadillo-like repeats. Proteins containing this domain ... |
535-753 |
8.84e-115 |
|
Armadillo-like; This domain contains armadillo-like repeats. Proteins containing this domain interact with numerous other proteins, through these interactions they are involved in a wide variety of processes including carcinogenesis, control of cellular ageing and survival, regulation of circadian rhythm and lysosomal sorting of G protein-coupled receptors.
Pssm-ID: 461447 [Multi-domain] Cd Length: 221 Bit Score: 346.71 E-value: 8.84e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 535 LGVRDLRKVLALLQKSDDPFIQQVALLTLSNNANYSCNQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQ 614
Cdd:pfam04826 1 LEPQELDKLLALLKSSEDPFIHEIALITLGNSAAYPFNQDIIRDLGGIPIIANLLSDSNPEVKEKALNALNNLSMNVENQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 615 GRLQVYMNKVMDDIMASNLNSAVQVVGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKILSNFAENPDML 694
Cdd:pfam04826 81 KKIKVYVNQVCKDIVSSPLNSEVQLAGLKLLTNLSVTNDYHHLVVSYIRDFFSLLSQGNEKTKFQVLKVLLNLSENPAMT 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 84027757 695 KKLLGTQVPSSFSSLYNSYVESEILINALTLFEIIFDNLRAE--VFNYREFNKGSLFYLCT 753
Cdd:pfam04826 161 RELLSAQVPSSLLSLFNSKEAKENLLRALTIFENINFHLKKEakLFVKEHFTKGSLFSIFR 221
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
140-386 |
1.94e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 54.50 E-value: 1.94e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 140 TPPPKVAGGLTAAEAPEIIGAPKVLEAPSTTEASGAVAAPGPTVSPMIAQTPGPVVPSPTIVstgPAAIPWAVAHPGAVQ 219
Cdd:PRK12323 372 AGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEAL---AAARQASARGPGGAP 448
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 220 SPGPAVPPMAVQSLVPAAPSwavVAPPGAVYIPVAAHFAGPAAASRVTQSPgtvipplpppssvlprgvpsvpgrtvqsp 299
Cdd:PRK12323 449 APAPAPAAAPAAAARPAAAG---PRPVAAAAAAAPARAAPAAAPAPADDDP----------------------------- 496
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 300 gaavhPVAAQSTGVVVPPRAVQYSGAAVTSGGAAVPSGGAATPRAAASTQRTASTEVmQVPRVAAATEATETPRigtPAM 379
Cdd:PRK12323 497 -----PPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAA-PAPRAAAATEPVVAPR---PPR 567
|
....*..
gi 84027757 380 VAEASLP 386
Cdd:PRK12323 568 ASASGLP 574
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
87-427 |
1.39e-05 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 48.76 E-value: 1.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 87 ASNLATTVAEEVAPAAP-----SPKVQNGAESKVQELNGAKTEANLESVVmpSATCTVTPPPKVAGGLTAAEAPEIIGAP 161
Cdd:pfam05109 409 ATNATTTTHKVIFSKAPestttSPTLNTTGFAAPNTTTGLPSSTHVPTNL--TAPASTGPTVSTADVTSPTPAGTTSGAS 486
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 162 KVLEAPSTTEASGAVAAPGPTVSPMIAQTPGPVVPSPTIVSTGP---AAIPW--AVAHPGAVQSPGP--AVPPMAVQSLV 234
Cdd:pfam05109 487 PVTPSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPAVTTPtpnATSPTlgKTSPTSAVTTPTPnaTSPTPAVTTPT 566
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 235 PAA--PSWAVVAPPGAVYIPVAAHFAGPAAASrvtqSPGTVIPPLPPPSSVLPRGVPSVPGRTVQSPGAAVHPVAAQST- 311
Cdd:pfam05109 567 PNAtiPTLGKTSPTSAVTTPTPNATSPTVGET----SPQANTTNHTLGGTSSTPVVTSPPKNATSAVTTGQHNITSSSTs 642
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 312 GVVVPPRAVQYSGAAVTSGGAA--VPSGGAATPRAAAS-TQRT-ASTEVMQVprvaaaTEATETPRIGTpamVAEASLPV 387
Cdd:pfam05109 643 SMSLRPSSISETLSPSTSDNSTshMPLLTSAHPTGGENiTQVTpASTSTHHV------STSSPAPRPGT---TSQASGPG 713
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 84027757 388 HSGAAENPG----TSGSSKTAATGKKAAPGAHTgAIPKAGSATG 427
Cdd:pfam05109 714 NSSTSTKPGevnvTKGTPPKNATSPQAPSGQKT-AVPTVTSTGG 756
|
|
| VATPase_H |
cd00256 |
VATPase_H, regulatory vacuolar ATP synthase subunit H (Vma13p); activation component of the ... |
540-607 |
2.20e-03 |
|
VATPase_H, regulatory vacuolar ATP synthase subunit H (Vma13p); activation component of the peripheral V1 complex of V-ATPase, a heteromultimeric enzyme which uses ATP to actively transport protons into organelles and extracellular compartments. The topology is that of a superhelical spiral, in part the geometry is similar to superhelices composed of armadillo repeat motifs, as found in importins for example.
Pssm-ID: 238159 [Multi-domain] Cd Length: 429 Bit Score: 41.23 E-value: 2.20e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 84027757 540 LRKVLALLQKSDDPFIQQVALLTLSNNAN-YSCNQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNL 607
Cdd:cd00256 355 LKILIHLLETSVDPIILAVACHDIGEYVRhYPRGKDVVEQLGGKQRVMRLLNHEDPNVRYEALLAVQKL 423
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
286-411 |
2.79e-03 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 40.91 E-value: 2.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 286 RGVPSVPGRTVQSPGAAVHPVAAQSTGVVVPPRAVQ---------YSGAAVTSGGAAVPSGGAATPRAAASTQRTASTEV 356
Cdd:NF040712 197 RPLATVPRLAREPADARPEEVEPAPAAEGAPATDSDpaeagtpddLASARRRRAGVEQPEDEPVGPGAAPAAEPDEATRD 276
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 84027757 357 MQVPRVAAATEATETPRIGTPAMVAEASLPVHSGAAE-NPGTSGSSKTAATGKKAA 411
Cdd:NF040712 277 AGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPaRPEPPPAPKPKRRRRRAS 332
|
|
| ARM |
smart00185 |
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ... |
572-608 |
3.00e-03 |
|
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.
Pssm-ID: 214547 [Multi-domain] Cd Length: 41 Bit Score: 35.87 E-value: 3.00e-03
10 20 30
....*....|....*....|....*....|....*..
gi 84027757 572 NQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLS 608
Cdd:smart00185 4 NKQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLS 40
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Arm_2 |
pfam04826 |
Armadillo-like; This domain contains armadillo-like repeats. Proteins containing this domain ... |
535-753 |
8.84e-115 |
|
Armadillo-like; This domain contains armadillo-like repeats. Proteins containing this domain interact with numerous other proteins, through these interactions they are involved in a wide variety of processes including carcinogenesis, control of cellular ageing and survival, regulation of circadian rhythm and lysosomal sorting of G protein-coupled receptors.
Pssm-ID: 461447 [Multi-domain] Cd Length: 221 Bit Score: 346.71 E-value: 8.84e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 535 LGVRDLRKVLALLQKSDDPFIQQVALLTLSNNANYSCNQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLSENYENQ 614
Cdd:pfam04826 1 LEPQELDKLLALLKSSEDPFIHEIALITLGNSAAYPFNQDIIRDLGGIPIIANLLSDSNPEVKEKALNALNNLSMNVENQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 615 GRLQVYMNKVMDDIMASNLNSAVQVVGLKFLTNMTITNDYQHLLVNSIANFFRLLSQGGGKIKVEILKILSNFAENPDML 694
Cdd:pfam04826 81 KKIKVYVNQVCKDIVSSPLNSEVQLAGLKLLTNLSVTNDYHHLVVSYIRDFFSLLSQGNEKTKFQVLKVLLNLSENPAMT 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 84027757 695 KKLLGTQVPSSFSSLYNSYVESEILINALTLFEIIFDNLRAE--VFNYREFNKGSLFYLCT 753
Cdd:pfam04826 161 RELLSAQVPSSLLSLFNSKEAKENLLRALTIFENINFHLKKEakLFVKEHFTKGSLFSIFR 221
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
140-386 |
1.94e-07 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 54.50 E-value: 1.94e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 140 TPPPKVAGGLTAAEAPEIIGAPKVLEAPSTTEASGAVAAPGPTVSPMIAQTPGPVVPSPTIVstgPAAIPWAVAHPGAVQ 219
Cdd:PRK12323 372 AGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEAL---AAARQASARGPGGAP 448
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 220 SPGPAVPPMAVQSLVPAAPSwavVAPPGAVYIPVAAHFAGPAAASRVTQSPgtvipplpppssvlprgvpsvpgrtvqsp 299
Cdd:PRK12323 449 APAPAPAAAPAAAARPAAAG---PRPVAAAAAAAPARAAPAAAPAPADDDP----------------------------- 496
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 300 gaavhPVAAQSTGVVVPPRAVQYSGAAVTSGGAAVPSGGAATPRAAASTQRTASTEVmQVPRVAAATEATETPRigtPAM 379
Cdd:PRK12323 497 -----PPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAA-PAPRAAAATEPVVAPR---PPR 567
|
....*..
gi 84027757 380 VAEASLP 386
Cdd:PRK12323 568 ASASGLP 574
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
136-385 |
4.70e-07 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 53.45 E-value: 4.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 136 TCTVTPPPKVAGGlTAAEAPEIIGAPKVLEAPSTTEASGAVAAPGPTVSPmiaQTPGPVVPSPTIVSTGPAAIPWAVAHP 215
Cdd:PRK07764 585 EAVVGPAPGAAGG-EGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAA---AAPAEASAAPAPGVAAPEHHPKHVAVP 660
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 216 GAVQSPGPA---VPPMAVQSLVPAAPSWAVVAPPGAVYIPVAAHFAGPAAASRVTQSPGtvipplpppssvlprgvpsvp 292
Cdd:PRK07764 661 DASDGGDGWpakAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAA--------------------- 719
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 293 grTVQSPGAAVHPVAAQSTGVVVPPRAVQYSGAAVTSGGAAVPSGGAATPRAAASTQRTASTEVMQVPRVAAATEATETP 372
Cdd:PRK07764 720 --QPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPSMDDED 797
|
250
....*....|...
gi 84027757 373 RiGTPAMVAEASL 385
Cdd:PRK07764 798 R-RDAEEVAMELL 809
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
128-413 |
5.71e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 53.40 E-value: 5.71e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 128 ESVVMPSATCTVTPPPKVAGGLTAAEAPEIIGAPKVLEAPSTTEASGAVAAPGPTVSPMIAQTPGPVVPSPTIVSTGPAA 207
Cdd:PHA03247 2709 EPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAV 2788
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 208 IPWAVAHPGAVQSPGPAVPPMAVQSLVPAAPSWAVVAPPGAVyiPVAAHFAGPAAASRVTQSPGTVipplpppssvlprG 287
Cdd:PHA03247 2789 ASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPP--PTSAQPTAPPPPPGPPPPSLPL-------------G 2853
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 288 VPSVPGRTVQSPGAAVHPVAAQSTGVVVPPRAVQYSGAAVTSGGAAVPSGGAATPRAAASTQRTASTEVMQVPrvaaate 367
Cdd:PHA03247 2854 GSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPP------- 2926
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 84027757 368 ATETPRIGTPAMvAEASLPVHSGAAENPGTSGSSKTAATGkKAAPG 413
Cdd:PHA03247 2927 PQPQPPPPPPPR-PQPPLAPTTDPAGAGEPSGAVPQPWLG-ALVPG 2970
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
40-395 |
7.24e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 53.02 E-value: 7.24e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 40 KPKNRASVGTGSRARaglRAGFTIDLGPGFSPPNPVDIEIMNKAQGEASNLATTVAEEVAPAAPSPKVQNG--AESKVQE 117
Cdd:PHA03247 2651 RPRDDPAPGRVSRPR---RARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSAtpLPPGPAA 2727
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 118 LNGAKTEANLESVVMPSATCTVTPppkvaGGLTAAEAPEIIGAPKVLEAPSTTEASGAVAAPGPTVSPMIAQT---PGPV 194
Cdd:PHA03247 2728 ARQASPALPAAPAPPAVPAGPATP-----GGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESReslPSPW 2802
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 195 VPS-PTIVSTGPAAIPWAVAHPGAVQ----SPGPAVPPMAVQSLVPAAPSWAVVAPPG----------AVYIPVAAHFAG 259
Cdd:PHA03247 2803 DPAdPPAAVLAPAAALPPAASPAGPLppptSAQPTAPPPPPGPPPPSLPLGGSVAPGGdvrrrppsrsPAAKPAAPARPP 2882
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 260 PAAASR--VTQSPGTVIPPLPPPSSVLPRGVPSVPGRTVQSPGAAVHPVAAQSTGVVVPPRA--VQYSGAAVTSGGAAVP 335
Cdd:PHA03247 2883 VRRLARpaVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAptTDPAGAGEPSGAVPQP 2962
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 84027757 336 SGGAATPRAAASTQRTASTEVMQVPRVAAATEA---TETPRIGTPAmvaeASLPVHSGAAENP 395
Cdd:PHA03247 2963 WLGALVPGRVAVPRFRVPQPAPSREAPASSTPPltgHSLSRVSSWA----SSLALHEETDPPP 3021
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
159-273 |
2.07e-06 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 51.25 E-value: 2.07e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 159 GAPKVLEAPSTTEASGAVAAPGPTVSPMIAQTPGPVVPSPTIVStgPAAIPWAVAHPGAVQSP---GPAVPPMAVQSLVP 235
Cdd:PRK14951 369 AAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAAS--APAAPPAAAPPAPVAAPaaaAPAAAPAAAPAAVA 446
|
90 100 110
....*....|....*....|....*....|....*...
gi 84027757 236 AAPSWAVVAPPGAVYIPVAAHFAGPAAASRVTQSPGTV 273
Cdd:PRK14951 447 LAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPA 484
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
99-430 |
9.50e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.55 E-value: 9.50e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 99 APAAPSPKVQNGAeSKVQELNGAKTEAN--LESVVMPSATCTVTPPPKVAGGLTAAEAPEIIGAPKVLEAPSTTEASGAV 176
Cdd:PHA03247 2620 DTHAPDPPPPSPS-PAANEPDPHPPPTVppPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSL 2698
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 177 AAPGPtvspmiaQTPGPVVPSPTIVSTGPAAIPWAVAHPGAVQSP-GPAVPPMAVQSLVPAAPSwAVVAPPGAVYIPVAA 255
Cdd:PHA03247 2699 ADPPP-------PPPTPEPAPHALVSATPLPPGPAAARQASPALPaAPAPPAVPAGPATPGGPA-RPARPPTTAGPPAPA 2770
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 256 HFAGPAAASRVTQSPGTVIPPLPPPSSVLPRGVPSVPGRTVQSPGAAVHPVAAQSTGVVVPPRAVQYSGA--------AV 327
Cdd:PHA03247 2771 PPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPpppgppppSL 2850
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 328 TSGGAAVPSGGAA---TPRAAASTQRTAS---TEVMQVPRVAAATEATETP-----RIGTPAMVAEASLPVHSGAAENPg 396
Cdd:PHA03247 2851 PLGGSVAPGGDVRrrpPSRSPAAKPAAPArppVRRLARPAVSRSTESFALPpdqpeRPPQPQAPPPPQPQPQPPPPPQP- 2929
|
330 340 350
....*....|....*....|....*....|....
gi 84027757 397 tsgSSKTAATGKKAAPGAHTGAIPKAGSATGAVP 430
Cdd:PHA03247 2930 ---QPPPPPPPRPQPPLAPTTDPAGAGEPSGAVP 2960
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
87-427 |
1.39e-05 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 48.76 E-value: 1.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 87 ASNLATTVAEEVAPAAP-----SPKVQNGAESKVQELNGAKTEANLESVVmpSATCTVTPPPKVAGGLTAAEAPEIIGAP 161
Cdd:pfam05109 409 ATNATTTTHKVIFSKAPestttSPTLNTTGFAAPNTTTGLPSSTHVPTNL--TAPASTGPTVSTADVTSPTPAGTTSGAS 486
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 162 KVLEAPSTTEASGAVAAPGPTVSPMIAQTPGPVVPSPTIVSTGP---AAIPW--AVAHPGAVQSPGP--AVPPMAVQSLV 234
Cdd:pfam05109 487 PVTPSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPAVTTPtpnATSPTlgKTSPTSAVTTPTPnaTSPTPAVTTPT 566
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 235 PAA--PSWAVVAPPGAVYIPVAAHFAGPAAASrvtqSPGTVIPPLPPPSSVLPRGVPSVPGRTVQSPGAAVHPVAAQST- 311
Cdd:pfam05109 567 PNAtiPTLGKTSPTSAVTTPTPNATSPTVGET----SPQANTTNHTLGGTSSTPVVTSPPKNATSAVTTGQHNITSSSTs 642
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 312 GVVVPPRAVQYSGAAVTSGGAA--VPSGGAATPRAAAS-TQRT-ASTEVMQVprvaaaTEATETPRIGTpamVAEASLPV 387
Cdd:pfam05109 643 SMSLRPSSISETLSPSTSDNSTshMPLLTSAHPTGGENiTQVTpASTSTHHV------STSSPAPRPGT---TSQASGPG 713
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 84027757 388 HSGAAENPG----TSGSSKTAATGKKAAPGAHTgAIPKAGSATG 427
Cdd:pfam05109 714 NSSTSTKPGevnvTKGTPPKNATSPQAPSGQKT-AVPTVTSTGG 756
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
133-430 |
1.52e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 48.44 E-value: 1.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 133 PSATCTVTPPPKVAGGLTAAEAPeiiGAPKVLEAPSTTEASGAVAAPGPTVSPmiaQTPGPVVPSPTIVSTGPAAIPWAV 212
Cdd:PRK07764 390 GAGAPAAAAPSAAAAAPAAAPAP---AAAAPAAAAAPAPAAAPQPAPAPAPAP---APPSPAGNAPAGGAPSPPPAAAPS 463
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 213 AHPGAVQSPGPAVPPMAVQSLVPAAPSWAVVAPP--GAVYIPVAAHFAGPAAASRVTQSPGTVIPPLPPPSSVLPRgVPS 290
Cdd:PRK07764 464 AQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPaaPAAPAGADDAATLRERWPEILAAVPKRSRKTWAILLPEAT-VLG 542
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 291 VPGRTVQ----SPGAA-----------VHPVAAQSTGVVVPPRAVqySGAAVTSGGAAVPSGGAATPRAAASTQRTAST- 354
Cdd:PRK07764 543 VRGDTLVlgfsTGGLArrfaspgnaevLVTALAEELGGDWQVEAV--VGPAPGAAGGEGPPAPASSGPPEEAARPAAPAa 620
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 84027757 355 EVMQVPRVAAATEATETPRIGTPAMVAEASLPVHSGAAENPGTSGSSKTAATGKKAAPGAHTGAIPKAGSATGAVP 430
Cdd:PRK07764 621 PAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGA 696
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
99-298 |
1.87e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 48.33 E-value: 1.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 99 APAAPSPKVQNGAESKVQElngAKTEANLESVVMPSATCTVTPPPKVAGGLTAAEAPeiigAPKVLEAPSTTEASGAVAA 178
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPA---AAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSP----APEALAAARQASARGPGGA 447
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 179 PGPTVSPmiAQTPGPVVPSPTIVSTGPAA---IPWAVAHPGAVQSPGPAVPP--------MAVQSLVPAAPswavvAPPG 247
Cdd:PRK12323 448 PAPAPAP--AAAPAAAARPAAAGPRPVAAaaaAAPARAAPAAAPAPADDDPPpweelppeFASPAPAQPDA-----APAG 520
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 84027757 248 AVYIPVAAHFAGPAAASRVTQSPGTVIPPLPPPSSVLPRGVPSVPGRTVQS 298
Cdd:PRK12323 521 WVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASAS 571
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
166-430 |
2.76e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 47.92 E-value: 2.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 166 APSTTeASGAVAAPGPTVSPMIAQTPGPVVPSPTIVSTGPAAIPWAVAhPGAVQSPGPAVPPMAVQSLVPA-----APSW 240
Cdd:PRK07003 359 EPAVT-GGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGA-AGAALAPKAAAAAAATRAEAPPaapapPATA 436
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 241 AVVAPPGAVYIPVAAHFAGPAAASRVTQSPGTVIPPLPPPSSVLPRGVPSVPGRTVQSPGAAVHPVAAQSTGVVVPPRAV 320
Cdd:PRK07003 437 DRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAA 516
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 321 QYSGAAVTSGGAAvPSGGAATPRAAASTQR-TASTEVMQVPRVAAATEATETPRI-GTPAMVAEASLPVHSGAAENPGTS 398
Cdd:PRK07003 517 SREDAPAAAAPPA-PEARPPTPAAAAPAARaGGAAAALDVLRNAGMRVSSDRGARaAAAAKPAAAPAAAPKPAAPRVAVQ 595
|
250 260 270
....*....|....*....|....*....|..
gi 84027757 399 GSSKTAATGKKAAPGAHTGAIPKAGSATGAVP 430
Cdd:PRK07003 596 VPTPRARAATGDAPPNGAARAEQAAESRGAPP 627
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
59-252 |
3.23e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 47.56 E-value: 3.23e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 59 AGFTIDL-----------GPGFSPPNPVDIEIMNKAQGEASNLATTVAEEVAPAAPSPKVQNGAESKVQELNGAKTEANL 127
Cdd:PRK12323 351 AGFTMTLlrmlafrpgqsGGGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAP 430
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 128 ESVVM---------PSATCTVTPPPKVAGGLTAAEAPEIIGAPKVLEAPSTTEASGAVAAPGPTVSPMIAQTPGPV-VPS 197
Cdd:PRK12323 431 EALAAarqasargpGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFaSPA 510
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 84027757 198 PTIVSTGPAAIPWAVAHPGAVQSPGPAVPPMAVQSLVPAAPSWAVVAPPGAVYIP 252
Cdd:PRK12323 511 PAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRP 565
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
99-395 |
4.41e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 47.15 E-value: 4.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 99 APAAPSPKVQNGAESKVQELNGAKTEANLESVVMP-SATCTVTPPPKVAggltAAEAPEIIGAPKVLEAPSTTEASGAVA 177
Cdd:PRK07003 367 APGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAvTGAAGAALAPKAA----AAAAATRAEAPPAAPAPPATADRGDDA 442
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 178 APGPTVSPMIAQTPGPVVPSPTIVSTGPAAIPWAVAHPgavqsPGPAVPPMAVQSLVPAAPSWAVVAPPGAVYIPVAAHF 257
Cdd:PRK07003 443 ADGDAPVPAKANARASADSRCDERDAQPPADSGSASAP-----ASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAAS 517
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 258 AGPAAAsrvtqspgtvipplpPPSSVLPRGVPSVPgrtvqspgAAVHPvAAQSTGVVVPPRAVQYSGAAVTSGGAAVPsG 337
Cdd:PRK07003 518 REDAPA---------------AAAPPAPEARPPTP--------AAAAP-AARAGGAAAALDVLRNAGMRVSSDRGARA-A 572
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 338 GAATPRAA--ASTQRTASTEVMQVPRVAAATEATETPrigtPAMVAEASLPVHSGAAENP 395
Cdd:PRK07003 573 AAAKPAAApaAAPKPAAPRVAVQVPTPRARAATGDAP----PNGAARAEQAAESRGAPPP 628
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
244-430 |
9.02e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 46.02 E-value: 9.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 244 APPGAVYIPVAAHFAGPAAASRVTQSPGTVIPPLPPPSSVLPRGVPSVPGRTVQSPGAAVHPVAAQstgvvvppRAVQYS 323
Cdd:PRK12323 373 GPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQ--------ASARGP 444
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 324 GAAVTSGGAAVPSGGAATPRAAASTQRTASTEVMQVPRVAAATEATETPRIGTPAMVAEASLPVHSGAAENPGTSGSSKT 403
Cdd:PRK12323 445 GGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAE 524
|
170 180
....*....|....*....|....*..
gi 84027757 404 AATGKKAAPGAHTGAIPKAGSATGAVP 430
Cdd:PRK12323 525 SIPDPATADPDDAFETLAPAPAAAPAP 551
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
141-328 |
9.89e-05 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 46.19 E-value: 9.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 141 PPPKVAGGLTAAEAPEIIGAPKVLEAPstTEASGAVAAPGPTVSPMIAQTPGPVVPSPTIVstgPAAIPWAVAHPGAVQS 220
Cdd:PRK10811 848 VRPQDVQVEEQREAEEVQVQPVVAEVP--VAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQP---EEVVVVETTHPEVIAA 922
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 221 PGPAVPPMAVQSLVPAAPSWAVVAPPGAVYIPVAAHFAGPAAASRVTQSPGTVIPPLPppssvlprgVPSVPGRTVQSPG 300
Cdd:PRK10811 923 PVTEQPQVITESDVAVAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPA---------APVVAEVAAEVET 993
|
170 180
....*....|....*....|....*...
gi 84027757 301 AAVHPVAAQSTGVVVPPRAVQYSGAAVT 328
Cdd:PRK10811 994 VTAVEPEVAPAQVPEATVEHNHATAPMT 1021
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
74-253 |
1.20e-04 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 45.80 E-value: 1.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 74 PVDIEIMNKAQGEAsNLATTVAEEVAPAAPSPKVQNGAEskvqelngakTEANLESVVMPsatCTVTPPPKVAGGLTAAE 153
Cdd:PRK10811 850 PQDVQVEEQREAEE-VQVQPVVAEVPVAAAVEPVVSAPV----------VEAVAEVVEEP---VVVAEPQPEEVVVVETT 915
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 154 APEIIGAPKVLEAPSTTEASGAVAAPgptvspmIAQTPGPVVPSP---TIVSTGPAAIPWAVAHPGAVQSPGPAVPPMAV 230
Cdd:PRK10811 916 HPEVIAAPVTEQPQVITESDVAVAQE-------VAEHAEPVVEPQdetADIEEAAETAEVVVAEPEVVAQPAAPVVAEVA 988
|
170 180
....*....|....*....|...
gi 84027757 231 QSLVPAAPSWAVVAPPGAVYIPV 253
Cdd:PRK10811 989 AEVETVTAVEPEVAPAQVPEATV 1011
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
86-243 |
1.47e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 45.09 E-value: 1.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 86 EASNLATTVAEEVAPAAPSPKVQNGAESKVQELNGAKTEANLESVVMPSATCTVTPPPKVAGGLTAAEAPEIIGAPKVLE 165
Cdd:PRK14951 367 AAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPAAVA 446
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 84027757 166 APsttEASGAVAAPGPTVSPMIAQTPGPVVPSPTIVSTGPAAIPWAVAHPGAVQSPgpavppmAVQSLVPAAPSWAVV 243
Cdd:PRK14951 447 LA---PAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTPTEEGDVWHA-------TVQQLAAAEAITALA 514
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
141-445 |
2.55e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.93 E-value: 2.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 141 PPPKVAGGLTAAEAPEIIGAPKVLEAPSTTEASGAVAAPGPTVSPMIAQTP--------GPVVPSPTIVSTGPAAIPWAV 212
Cdd:PHA03247 2551 PPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPvddrgdprGPAPPSPLPPDTHAPDPPPPS 2630
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 213 AHPGAVQSPGPAVPPMAVQSLVPAAPSWAVVAPPGAVYIPVAAHFAGPAAASRVTQSPGTVIPPLPPPSSVLPRGVPSVP 292
Cdd:PHA03247 2631 PSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEP 2710
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 293 GRTVQSPGAAVHPVAAQSTGVVVPPRAVQYSGAAVTsgGAAVPSGGAATPRAAASTQRTASTEvmqvPRVAAATEATETP 372
Cdd:PHA03247 2711 APHALVSATPLPPGPAAARQASPALPAAPAPPAVPA--GPATPGGPARPARPPTTAGPPAPAP----PAAPAAGPPRRLT 2784
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 84027757 373 R-IGTPAMVAEASLPVHSGAAENPGTSgSSKTAATGKKAAPgahTGAIPKAGSATGAVPKGGGGKGGNKNRSGG 445
Cdd:PHA03247 2785 RpAVASLSESRESLPSPWDPADPPAAV-LAPAAALPPAASP---AGPLPPPTSAQPTAPPPPPGPPPPSLPLGG 2854
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
130-450 |
2.86e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 44.78 E-value: 2.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 130 VVMPSATCTVTPPpkVAGGLTAAEAPEIIGAPK---VLEAPSTTEASGAVAAPGPTVSPMIAQTPGPVVPSPTIVSTGPA 206
Cdd:PHA03307 42 QLVSDSAELAAVT--VVAGAAACDRFEPPTGPPpgpGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPP 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 207 AIPWAVAHPgavqSPGPAVPPMAVQSLVPAAPSWAVVAPPGAVYIPVAAHFAGPAAASRVTQSPGTvipplpppssvlpr 286
Cdd:PHA03307 120 TPPPASPPP----SPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEE-------------- 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 287 gvpsvPGRTVQSPGAAVhPVAAQSTGVVVPPRAVQYSGAAVTSGGAAVPSGGAATPRAAASTQRTAStevmqVPRVAAAT 366
Cdd:PHA03307 182 -----TARAPSSPPAEP-PPSTPPAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSS-----ESSGCGWG 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 367 EATETPRiGTPAMVAeasLPVHSGAAENPGTSGSSKTAATGKKAAPGAHTGAIPKAGSATGAVPKGGGGKGGNKNRSGGK 446
Cdd:PHA03307 251 PENECPL-PRPAPIT---LPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSS 326
|
....
gi 84027757 447 GKNR 450
Cdd:PHA03307 327 SSTS 330
|
|
| kgd |
PRK12270 |
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ... |
292-387 |
3.72e-04 |
|
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;
Pssm-ID: 237030 [Multi-domain] Cd Length: 1228 Bit Score: 44.11 E-value: 3.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 292 PGRTVQSPGAAVHPVAAQSTGVVVPPRAVQYSGAAVTSGGAAVPSGGAATPRAAASTQRTASTEVMQV-PRVAAATEATE 370
Cdd:PRK12270 38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAaAPAAAAVEDEV 117
|
90 100
....*....|....*....|
gi 84027757 371 TPRIGTPAMVA---EASLPV 387
Cdd:PRK12270 118 TPLRGAAAAVAknmDASLEV 137
|
|
| PRK06347 |
PRK06347 |
1,4-beta-N-acetylmuramoylhydrolase; |
300-406 |
5.76e-04 |
|
1,4-beta-N-acetylmuramoylhydrolase;
Pssm-ID: 180536 [Multi-domain] Cd Length: 592 Bit Score: 43.14 E-value: 5.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 300 GAAVHPVAAQSTGVVVPPRAVQYSGAAVTSGGAAVPSGGA-ATPRAAASTQRTASTEVMQVPRVAAATEATETPRIGTPA 378
Cdd:PRK06347 28 GATIAGVTAIATSITVPGIEVIVSADETAPADEASKSAEAnTTKEAPATATPENTTEPTVEPKQTETKEQTKTPEEKQPA 107
|
90 100
....*....|....*....|....*...
gi 84027757 379 MVAEASLPVHSGAAENPGTSGSSKTAAT 406
Cdd:PRK06347 108 AKQVEKAPAEPATVSNPDNATSSSTPAT 135
|
|
| PHA02682 |
PHA02682 |
ORF080 virion core protein; Provisional |
99-235 |
7.27e-04 |
|
ORF080 virion core protein; Provisional
Pssm-ID: 177464 [Multi-domain] Cd Length: 280 Bit Score: 42.16 E-value: 7.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 99 APAAPSP---KVQNGAESKVQELN---GAKTEANLESVVMPSATCTVTPPPKVAGGLTAAEAPeiigapkvleAPSTTEA 172
Cdd:PHA02682 36 APAAPCPpdaDVDPLDKYSVKEAGryyQSRLKANSACMQRPSGQSPLAPSPACAAPAPACPAC----------APAAPAP 105
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 84027757 173 SGAVAAPGPTVSPMIAQTPGPVVPSPTIVSTGPAAIPWAVAHPGA----VQSPGPAVPPMAVQSLVP 235
Cdd:PHA02682 106 AVTCPAPAPACPPATAPTCPPPAVCPAPARPAPACPPSTRQCPPApplpTPKPAPAAKPIFLHNQLP 172
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
216-414 |
7.51e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 42.94 E-value: 7.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 216 GAVQSPGPAVPPMAVQSLVPAAPSWAVVAPPGAVYIPVAAHFAGPAAASRVTQSPGTVIPPLPPPSSVLPRGVPSVPGRT 295
Cdd:PRK12323 369 GGGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAP 448
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 296 VQSPGAAVHPVAAQstgvvvPPRAVQYSGAAVTSGGAAVPSGGAATPRAAAST--------QRTASTEVMQVPRVAAATE 367
Cdd:PRK12323 449 APAPAPAAAPAAAA------RPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDpppweelpPEFASPAPAQPDAAPAGWV 522
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 84027757 368 ATETPRIGTpamvAEASLPVHSGAAENPGTSGSSKTAATGKKAAPGA 414
Cdd:PRK12323 523 AESIPDPAT----ADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRP 565
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
173-406 |
1.30e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 42.17 E-value: 1.30e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 173 SGAVAAPGPTVSPMIAQtPGPVVPSPTIVSTGPAAIPWAVAHPGAVQSPGPAvppmavQSLVPAAPSWAVVAPPGAVYIP 252
Cdd:PRK12323 368 SGGGAGPATAAAAPVAQ-PAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARA------VAAAPARRSPAPEALAAARQAS 440
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 253 VAAHFAGPAAASRVtqspgtvipplpppssvlprgvPSVPGRTVQSPGAAVHPVAAqsTGVVVPPRAVQYSGAAVTSGGA 332
Cdd:PRK12323 441 ARGPGGAPAPAPAP----------------------AAAPAAAARPAAAGPRPVAA--AAAAAPARAAPAAAPAPADDDP 496
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 333 -----AVPSGGAATPRAAASTQRTASTEVMQVPRVAAATEATETPRIG-TPAMVAEASLPVHSGAAENPGTSGSSKTAAT 406
Cdd:PRK12323 497 ppweeLPPEFASPAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPApAAAPAPRAAAATEPVVAPRPPRASASGLPDM 576
|
|
| VATPase_H |
cd00256 |
VATPase_H, regulatory vacuolar ATP synthase subunit H (Vma13p); activation component of the ... |
540-607 |
2.20e-03 |
|
VATPase_H, regulatory vacuolar ATP synthase subunit H (Vma13p); activation component of the peripheral V1 complex of V-ATPase, a heteromultimeric enzyme which uses ATP to actively transport protons into organelles and extracellular compartments. The topology is that of a superhelical spiral, in part the geometry is similar to superhelices composed of armadillo repeat motifs, as found in importins for example.
Pssm-ID: 238159 [Multi-domain] Cd Length: 429 Bit Score: 41.23 E-value: 2.20e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 84027757 540 LRKVLALLQKSDDPFIQQVALLTLSNNAN-YSCNQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNL 607
Cdd:cd00256 355 LKILIHLLETSVDPIILAVACHDIGEYVRhYPRGKDVVEQLGGKQRVMRLLNHEDPNVRYEALLAVQKL 423
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
71-422 |
2.44e-03 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 41.10 E-value: 2.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 71 PPNPVDIEIMNKAQGEASNLATTVAEEVAPAAPSPKVQNGAESKVQELNGAKTEANLESVVMPSATCTVTPPPKVAGGLT 150
Cdd:pfam17823 66 APAPVTLTKGTSAAHLNSTEVTAEHTPHGTDLSEPATREGAADGAASRALAAAASSSPSSAAQSLPAAIAALPSEAFSAP 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 151 AAEAPeiigapkvlEAPSTTEASGAVAApgpTVSPMIAqTPGPVVPSPTIVSTGPAAIPWAVAHPGAVQSPGPAVP---- 226
Cdd:pfam17823 146 RAAAC---------RANASAAPRAAIAA---ASAPHAA-SPAPRTAASSTTAASSTTAASSAPTTAASSAPATLTPargi 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 227 -PMAVQSLVPAAPSWAVVAP---PGAVYIPVAAHFAGPAAASRVTQSPGTVIPPLPPPSSVLPRGVPSVPGRTVQSPGAA 302
Cdd:pfam17823 213 sTAATATGHPAAGTALAAVGnssPAAGTVTAAVGTVTPAALATLAAAAGTVASAAGTINMGDPHARRLSPAKHMPSDTMA 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 303 VHPVAAQSTGVVVPPRAVQYSGAAVTSGGAAVPSGGAA-----TPRAAASTQRT--ASTEVMQVPRVAAATEATETPRI- 374
Cdd:pfam17823 293 RNPAAPMGAQAQGPIIQVSTDQPVHNTAGEPTPSPSNTtlepnTPKSVASTNLAvvTTTKAQAKEPSASPVPVLHTSMIp 372
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 84027757 375 ---GTPAMVAEASLPVHSGAAeNPGTSGSSKTAATgkKAAPG-AHTGAIPKA 422
Cdd:pfam17823 373 eveATSPTTQPSPLLPTQGAA-GPGILLAPEQVAT--EATAGtASAGPTPRS 421
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
159-444 |
2.77e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 41.46 E-value: 2.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 159 GAPKVLEAPSTTEASGAVAAPGPTVS--PMIAQTPGPVVPSPTIVSTGPAAIP-----WAVAH------PGAVQSPGPAV 225
Cdd:PHA03247 2476 GAPVYRRPAEARFPFAAGAAPDPGGGgpPDPDAPPAPSRLAPAILPDEPVGEPvhprmLTWIRgleelaSDDAGDPPPPL 2555
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 226 PPMAvqslVPAAPSWAVvapPGAVYIPVAAHFAGPAAASRvtqsPGTVIPPLPPPSSVLPRGVPSVPGRTVQSPGAAVHP 305
Cdd:PHA03247 2556 PPAA----PPAAPDRSV---PPPRPAPRPSEPAVTSRARR----PDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAP 2624
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 306 vaaqstgvvVPPRAVQYSGAAVTSGGAAVPSGGAATPRAAASTQRTASTEvmQVPRVAAATEATETPRIGTPAMVAEASL 385
Cdd:PHA03247 2625 ---------DPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPR--RARRLGRAAQASSPPQRPRRRAARPTVG 2693
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 84027757 386 PVHSGA-----------AENPGTSGSSKT--AATGKKAAPGAHTGAIPKAGSATGAVPKGGGGKGGNKNRSG 444
Cdd:PHA03247 2694 SLTSLAdpppppptpepAPHALVSATPLPpgPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAG 2765
|
|
| SepH |
NF040712 |
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ... |
286-411 |
2.79e-03 |
|
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.
Pssm-ID: 468676 [Multi-domain] Cd Length: 346 Bit Score: 40.91 E-value: 2.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 286 RGVPSVPGRTVQSPGAAVHPVAAQSTGVVVPPRAVQ---------YSGAAVTSGGAAVPSGGAATPRAAASTQRTASTEV 356
Cdd:NF040712 197 RPLATVPRLAREPADARPEEVEPAPAAEGAPATDSDpaeagtpddLASARRRRAGVEQPEDEPVGPGAAPAAEPDEATRD 276
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 84027757 357 MQVPRVAAATEATETPRIGTPAMVAEASLPVHSGAAE-NPGTSGSSKTAATGKKAA 411
Cdd:NF040712 277 AGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPaRPEPPPAPKPKRRRRRAS 332
|
|
| ARM |
smart00185 |
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form ... |
572-608 |
3.00e-03 |
|
Armadillo/beta-catenin-like repeats; Approx. 40 amino acid repeat. Tandem repeats form superhelix of helices that is proposed to mediate interaction of beta-catenin with its ligands. Involved in transducing the Wingless/Wnt signal. In plakoglobin arm repeats bind alpha-catenin and N-cadherin.
Pssm-ID: 214547 [Multi-domain] Cd Length: 41 Bit Score: 35.87 E-value: 3.00e-03
10 20 30
....*....|....*....|....*....|....*..
gi 84027757 572 NQETIRKLGGLPIIANMINKTDPHIKEKALMAMNNLS 608
Cdd:smart00185 4 NKQAVVDAGGLPALVELLKSEDEEVVKEAAWALSNLS 40
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
113-395 |
3.51e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 40.82 E-value: 3.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 113 SKVQELNGAKTEANLESVVMPS-ATCTVTPPPKVAGGLTAAEAPEIIGAPKvleAPSTTEASGAVAAPGPTVSPMIAQTP 191
Cdd:PHA03378 667 TQIGHIPYQPSPTGANTMLPIQwAPGTMQPPPRAPTPMRPPAAPPGRAQRP---AAATGRARPPAAAPGRARPPAAAPGR 743
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 192 GPVVPSPTIVSTGPAAIPWAVAHPGAVQ-----SPGPAVPPMAVQSLVPA-APSWAVVAPPGAVYIPVAAHFAGPAAASR 265
Cdd:PHA03378 744 ARPPAAAPGRARPPAAAPGRARPPAAAPgaptpQPPPQAPPAPQQRPRGApTPQPPPQAGPTSMQLMPRAAPGQQGPTKQ 823
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 266 VTQSPGTvipplpppsSVLPRGVPSV--PGRTVQSPGAAVHPVAAQSTGVVVPPRAVQYSGAAVTSggaAVPSGGAATPR 343
Cdd:PHA03378 824 ILRQLLT---------GGVKRGRPSLkkPAALERQAAAGPTPSPGSGTSDKIVQAPVFYPPVLQPI---QVMRQLGSVRA 891
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 84027757 344 AAASTQRTASTEVMQVPRVAAATEATETP---RIGTPAMVaeASLPVHSGAAENP 395
Cdd:PHA03378 892 AAASTVTQAPTEYTGERRGVGPMHPTDIPpskRAKTDAYV--ESQPPHGGQSHSF 944
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
151-428 |
3.99e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 40.82 E-value: 3.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 151 AAEAPEIIGAPKVLEAPSTTeasgavaAPGPTVSPMIAQTPGP---VVPSPTIVSTGPAAIPWAVAHPGAvqsPGPAVPP 227
Cdd:PHA03378 586 ASSAPSYAQTPWPVPHPSQT-------PEPPTTQSHIPETSAPrqwPMPLRPIPMRPLRMQPITFNVLVF---PTPHQPP 655
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 228 MAvqSLVPAAPSWAVVAppgavYIPVAAHFAGPAAASRVTQSPGTVIPPLPPPSSVLPRGVPSVPGRTVQSPGAAVHPVA 307
Cdd:PHA03378 656 QV--EITPYKPTWTQIG-----HIPYQPSPTGANTMLPIQWAPGTMQPPPRAPTPMRPPAAPPGRAQRPAAATGRARPPA 728
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 308 AQSTGVVVPPRAVQYSGAAVTSGGAAVPSGGAATP---------RAAASTQRTASTEVMQVPRvaAATEATETPRIG-TP 377
Cdd:PHA03378 729 AAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGRarppaaapgAPTPQPPPQAPPAPQQRPR--GAPTPQPPPQAGpTS 806
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 84027757 378 AMVAEASLPVHSGAAENP----GTSGSSKTAATGKKAAPGAHTGAI---PKAGSATGA 428
Cdd:PHA03378 807 MQLMPRAAPGQQGPTKQIlrqlLTGGVKRGRPSLKKPAALERQAAAgptPSPGSGTSD 864
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
336-430 |
5.99e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 40.24 E-value: 5.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 336 SGGAATPRAAASTQRTASTEVMQVPRVAAATEATETPRIGTPAMVAEASLPVhsgaAENPGTSGSSKTAATGKKAAPGAH 415
Cdd:PRK12323 368 SGGGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAV----AAAPARRSPAPEALAAARQASARG 443
|
90
....*....|....*
gi 84027757 416 TGAIPKAGSATGAVP 430
Cdd:PRK12323 444 PGGAPAPAPAPAAAP 458
|
|
| rne |
PRK10811 |
ribonuclease E; Reviewed |
86-412 |
6.06e-03 |
|
ribonuclease E; Reviewed
Pssm-ID: 236766 [Multi-domain] Cd Length: 1068 Bit Score: 40.02 E-value: 6.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 86 EASNLATTVAEEVAPAAP-------SPKVQNGAESKVQELNGAKTEANLESVVMPSATCTVTPPPKVaggltaaEAPEII 158
Cdd:PRK10811 701 EQSVQETEQEERVQQVQPrrkqrqlNQKVRIEQSVAEEAVAPVVEETVAAEPVVQEVPAPRTELVKV-------PLPVVA 773
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 159 GAPKVLEAPSTTEASGAVAAP------------------------GPTVSPMiaqtPGPV-VPSPTIVStGPAAIPWAVA 213
Cdd:PRK10811 774 QTAPEQDEENNAENRDNNGMPrrsrrsprhlrvsgqrrrryrderYPTQSPM----PLTVaCASPEMAS-GKVWIRYPVV 848
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 214 HPGAVQSPgPAVPPMAVQSLVPAAPSWAVVAPPGAVYIPVAAHFAGPAAASRVTQSPGTVIPPLPPPSSVLPRGVPSV-P 292
Cdd:PRK10811 849 RPQDVQVE-EQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPVTeQ 927
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 293 GRTVQSPGAAVHPVAAQSTGVVVPPRAVQYSGAAVTSGGAAVPSGGAATPRAAASTQRTASTEVMQvPRVAAATEATETP 372
Cdd:PRK10811 928 PQVITESDVAVAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVET-VTAVEPEVAPAQV 1006
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 84027757 373 RIGT---------------PAMVAEAslPVHSG----AAENPGTSGSSKTAATGKKAAP 412
Cdd:PRK10811 1007 PEATvehnhatapmtrapaPEYVPEA--PRHSDwqrpTFAFEGKGAAGGHSATHHASAP 1063
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
186-385 |
6.39e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 39.85 E-value: 6.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 186 MIAQTPGPVVPSPTI--VSTGPAAIPWAVAHPGAVQSPGPAVPPMAVQSLVPAAPSWAVVAPPgavyipvaahfagpaaA 263
Cdd:PRK07994 356 MLAFHPAAPLPEPEVppQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPET----------------T 419
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 264 SRVTQSPGTVIPPLPPPSSVLPRGVPSVPGRTVQSPGAAVHPVAAQ-STGVVVPPRAVQYSGAAVTSGGAAVPSGgaATP 342
Cdd:PRK07994 420 SQLLAARQQLQRAQGATKAKKSEPAAASRARPVNSALERLASVRPApSALEKAPAKKEAYRWKATNPVEVKKEPV--ATP 497
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 84027757 343 RAAASTQRTASTEVMQVPRVAAATE----ATETPRIGTPAMVAEASL 385
Cdd:PRK07994 498 KALKKALEHEKTPELAAKLAAEAIErdpwAALVSQLGLPGLVEQLAL 544
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
289-430 |
7.10e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 39.86 E-value: 7.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 289 PSVPGRTVQSPGAAVHPVAAQSTGVVVPpravqysgAAVTSGGAAVPSGGAATPRAAASTQRTASTEVMQVPRVAAATEA 368
Cdd:PRK12323 365 PGQSGGGAGPATAAAAPVAQPAPAAAAP--------AAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAA 436
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 84027757 369 TETPRIGTPAMVAEASLPVHSGAAENPGTSGSSKTAATGKKAAPGAHTGAIPKAGSATGAVP 430
Cdd:PRK12323 437 RQASARGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPP 498
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
35-249 |
8.21e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 39.58 E-value: 8.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 35 KKRLTKPKNRASVGTGSRARAGLRAGFTIDLGPGFSPPNPvdieimnkAQGEASNLATTVAEEVAPAAPSPKVQNGAESK 114
Cdd:PRK07764 558 ARRFASPGNAEVLVTALAEELGGDWQVEAVVGPAPGAAGG--------EGPPAPASSGPPEEAARPAAPAAPAAPAAPAP 629
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 115 vqelNGAKTEANLESVVMPSATCTVTPPPKVAGGLTAAEAPEIIGAPKVLEAP-STTEASGAVAAPGPTVSPMIAQTPGP 193
Cdd:PRK07764 630 ----AGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPaAPPPAPAPAAPAAPAGAAPAQPAPAP 705
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 194 VVPSPTIVSTGPAAIPWAVAHPGAVQSPGPA----VPPMAVQSLVPAAPSWAVVAPPGAV 249
Cdd:PRK07764 706 AATPPAGQADDPAAQPPQAAQGASAPSPAADdpvpLPPEPDDPPDPAGAPAQPPPPPAPA 765
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
83-406 |
9.73e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 39.58 E-value: 9.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 83 AQGEASNLATTVAEEVAPAAPSPKVqngAESKVQELNGAKTEANLESVVMPSATCTVTPPPKVAGGLTAAEAPEIIGAPk 162
Cdd:PRK07764 413 AAAAPAAAAAPAPAAAPQPAPAPAP---APAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAP- 488
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 163 vleAPSTTEASGAVAAPGPTVSP----------------------MIAQTPGPVVPS---PTIV---STGPAA------- 207
Cdd:PRK07764 489 ---APAAAPAAPAAPAAPAGADDaatlrerwpeilaavpkrsrktWAILLPEATVLGvrgDTLVlgfSTGGLArrfaspg 565
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 208 --------------IPWAV-----AHPGAVQSPGPAVPPMAVQSLVPAAPSwAVVAPPGAVYiPVAAHFAGPAAASRVTQ 268
Cdd:PRK07764 566 naevlvtalaeelgGDWQVeavvgPAPGAAGGEGPPAPASSGPPEEAARPA-APAAPAAPAA-PAPAGAAAAPAEASAAP 643
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 84027757 269 SPGTVIPPLPPPSSVLPRGVPSVPGRTVQSPGAAVHPVAAQSTGVVVPPRAVQYSGAAVTSGGAAVPSGGAATPRAAAST 348
Cdd:PRK07764 644 APGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQ 723
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 84027757 349 QRTASTEVmqVPRVAAATEATETPRIGTPAMVAEASLPvHSGAAENPGTSGSSKTAAT 406
Cdd:PRK07764 724 AAQGASAP--SPAADDPVPLPPEPDDPPDPAGAPAQPP-PPPAPAPAAAPAAAPPPSP 778
|
|
| |
