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Conserved domains on  [gi|1396648835|gb|PXM48367|]
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type 1 fimbrial protein [Klebsiella variicola]

Protein Classification

fimbrial protein( domain architecture ID 10007530)

fimbrial protein similar to Escherichia coli fimbrial adapter PapF, which is required for the correct presentation of the PapG adhesin at the distal end of the tip fibrillum

Gene Ontology:  GO:0009289|GO:0007155
PubMed:  1670938|22411982|2890081

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
14-170 1.88e-47

Pilin (type 1 fimbrial protein) [Cell motility];


:

Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 152.12  E-value: 1.88e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835  14 WNVTLPGGSMRFQGLIMASSCRVEAGDRQMTVNLGQISSNRFHDVGEDSNPIPFAIHLQDCSTAVSQHVGVAFHGVADGK 93
Cdd:COG3539    17 AAAAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLTNCDAGTSNSVKVTFTGTADSA 96

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1396648835  94 NPDVLSVgEGPGIASGIGIALFDSQGQQLPLNRPPDRWVPLYRGPTTLNFVAKYRATGRQVTGGAANAQAWFSLTYQ 170
Cdd:COG3539    97 NPGLLAN-TGSGGASGVGIQLLDSDGTPIPLGTPSSAVTLTSNGSATLPFYARYVATGATVTAGSFNATATFTIDYQ 172
 
Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
14-170 1.88e-47

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 152.12  E-value: 1.88e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835  14 WNVTLPGGSMRFQGLIMASSCRVEAGDRQMTVNLGQISSNRFHDVGEDSNPIPFAIHLQDCSTAVSQHVGVAFHGVADGK 93
Cdd:COG3539    17 AAAAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLTNCDAGTSNSVKVTFTGTADSA 96

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1396648835  94 NPDVLSVgEGPGIASGIGIALFDSQGQQLPLNRPPDRWVPLYRGPTTLNFVAKYRATGRQVTGGAANAQAWFSLTYQ 170
Cdd:COG3539    97 NPGLLAN-TGSGGASGVGIQLLDSDGTPIPLGTPSSAVTLTSNGSATLPFYARYVATGATVTAGSFNATATFTIDYQ 172
PRK15200 PRK15200
type 1 fimbrial protein subunit FimI;
16-169 4.25e-31

type 1 fimbrial protein subunit FimI;


Pssm-ID: 185122  Cd Length: 177  Bit Score: 110.33  E-value: 4.25e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835  16 VTLPGGSMRFQGLIMASSCRVEAGDRQMTVNLGQISSNRFHDVGEDSN-PIPFAIHLQDCSTAVSQHVGVAFHGVADGKN 94
Cdd:PRK15200   22 VMVESGRVHLRGQLVNGGCAVATESQDLRVLMGQYRTNAFTGPGSFAPvSVPFSLRLISCSAEVWRHVGIAFAGVTPAED 101

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1396648835  95 PDV-LSVGEGPGiASGIGIALFDSQGQQLPLNRPPDRWVPLYRGPTTLNFVAKYRATGRQVTGGAANAQAWFSLTY 169
Cdd:PRK15200  102 PHVfLASGEGIG-NAGIGLALFDDQQRQIIPNTLPLHYAPILTSEMTLHFTARYRAISENMTPGRIHSEVWFTLVY 176
Fimbrial pfam00419
Fimbrial protein;
31-170 5.86e-28

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 101.74  E-value: 5.86e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835  31 ASSCRVEAGDRQmTVNLGQISSNRFHDVGEDSNPIPFAIHLQDCSTAVSQHVGVAFHGVADGKNPDVLSVGEGPGIASGI 110
Cdd:pfam00419  11 PATCKITAGTPI-EVDFGQIPVNELNAGGEGSRQKPFSITLECSSGSSAVKVTVGLFGTADASSPNLLLTGNGAGAATGV 89

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1396648835 111 GIALFDSQGQQLPLNRP----PDRWVPLYrgPTTLNFVAKYRATGRQ-VTGGAANAQAWFSLTYQ 170
Cdd:pfam00419  90 GIRLYDANGGALPPNNGtssiPVSATAAV--ATGITFTASLVATTGGtPTAGDFNATATIVVDYQ 152
 
Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
14-170 1.88e-47

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 152.12  E-value: 1.88e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835  14 WNVTLPGGSMRFQGLIMASSCRVEAGDRQMTVNLGQISSNRFHDVGEDSNPIPFAIHLQDCSTAVSQHVGVAFHGVADGK 93
Cdd:COG3539    17 AAAAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLTNCDAGTSNSVKVTFTGTADSA 96

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1396648835  94 NPDVLSVgEGPGIASGIGIALFDSQGQQLPLNRPPDRWVPLYRGPTTLNFVAKYRATGRQVTGGAANAQAWFSLTYQ 170
Cdd:COG3539    97 NPGLLAN-TGSGGASGVGIQLLDSDGTPIPLGTPSSAVTLTSNGSATLPFYARYVATGATVTAGSFNATATFTIDYQ 172
PRK15200 PRK15200
type 1 fimbrial protein subunit FimI;
16-169 4.25e-31

type 1 fimbrial protein subunit FimI;


Pssm-ID: 185122  Cd Length: 177  Bit Score: 110.33  E-value: 4.25e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835  16 VTLPGGSMRFQGLIMASSCRVEAGDRQMTVNLGQISSNRFHDVGEDSN-PIPFAIHLQDCSTAVSQHVGVAFHGVADGKN 94
Cdd:PRK15200   22 VMVESGRVHLRGQLVNGGCAVATESQDLRVLMGQYRTNAFTGPGSFAPvSVPFSLRLISCSAEVWRHVGIAFAGVTPAED 101

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1396648835  95 PDV-LSVGEGPGiASGIGIALFDSQGQQLPLNRPPDRWVPLYRGPTTLNFVAKYRATGRQVTGGAANAQAWFSLTY 169
Cdd:PRK15200  102 PHVfLASGEGIG-NAGIGLALFDDQQRQIIPNTLPLHYAPILTSEMTLHFTARYRAISENMTPGRIHSEVWFTLVY 176
PRK15209 PRK15209
long polar fimbrial protein LpfA; Provisional
 21-170 3.47e-30

long polar fimbrial protein LpfA; Provisional


Pssm-ID: 185131 [Multi-domain]  Cd Length: 174  Bit Score: 108.13  E-value: 3.47e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835  21 GSMRFQGLIMASSCRVEAGDRQMTVNLGQISSNRFHDVGEDSNPIPFAIHLQDCSTAVSQHVGVAFHGVADGKNPDVLSV 100
Cdd:PRK15209   26 GTVKFTGEIVDAPCVVSTDSQNQEVVLGQVKKSVFKAIGDKSSAKPFQIKLEDCDITTNKKVNVSFNGVGDADDSTLVSV 105

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835 101 GEGPGIASGIGIALFDSQGQQLPLNRPPDRwVPLYRGPTTLNFVAKYRATGRQVTGGAANAQAWFSLTYQ 170
Cdd:PRK15209  106 STEAGAATGVGIGIYDNANTLVELNTGKST-TTLAAGQTVLYFTANYVSTKDTVTTGYGNAEVDFNLSYE 174
PRK15194 PRK15194
type 1 fimbrial protein subunit FimA;
16-170 6.90e-30

type 1 fimbrial protein subunit FimA;


Pssm-ID: 237920  Cd Length: 185  Bit Score: 107.73  E-value: 6.90e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835  16 VTLPGGSMRFQGLIMASSCRVEAGDRQMTVNLGQISSNRFHDVGEDSNPIPFAIHLQDCSTAVSQHVGVAFHGVADGKNP 95
Cdd:PRK15194   28 VSVDGGTIHFEGELVNAACSVNTDSADQTVTLGQYRTAIFTAVGNTTALIPFTIQLNDCDPVVAATAAVAFSGQADATND 107

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835  96 DVLSV--GEGPGIASGIGIALFDSQGQQLplnrPPDRWV-----PLYRGPTTLNFVAKYRATGRQVTGGAANAQAWFSLT 168
Cdd:PRK15194  108 NLLAVasSTNTTTATGVGIEILDNTSSIL----KPDGATfsanqNLIEGTNTLHFSARYKATGTSASAGQANADATFIMK 183


                  ..
gi 1396648835 169 YQ 170
Cdd:PRK15194  184 YE 185
Fimbrial pfam00419
Fimbrial protein;
31-170 5.86e-28

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 101.74  E-value: 5.86e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835  31 ASSCRVEAGDRQmTVNLGQISSNRFHDVGEDSNPIPFAIHLQDCSTAVSQHVGVAFHGVADGKNPDVLSVGEGPGIASGI 110
Cdd:pfam00419  11 PATCKITAGTPI-EVDFGQIPVNELNAGGEGSRQKPFSITLECSSGSSAVKVTVGLFGTADASSPNLLLTGNGAGAATGV 89

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1396648835 111 GIALFDSQGQQLPLNRP----PDRWVPLYrgPTTLNFVAKYRATGRQ-VTGGAANAQAWFSLTYQ 170
Cdd:pfam00419  90 GIRLYDANGGALPPNNGtssiPVSATAAV--ATGITFTASLVATTGGtPTAGDFNATATIVVDYQ 152
PRK15191 PRK15191
fimbrial protein BcfF; Provisional
 21-170 7.43e-22

fimbrial protein BcfF; Provisional


Pssm-ID: 185113 [Multi-domain]  Cd Length: 172  Bit Score: 86.70  E-value: 7.43e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835  21 GSMRFQGLIMASSCRVEAGDRQMTVNLGQISSNRFHDVGEDSNPIPFAIHLQDCSTAVSQhVGVAFHGVADGKNPDVLSV 100
Cdd:PRK15191   23 GRVYVSGTITDNTCSLSPGSENINVAMGAVSQRQFYRAGDGSAWQPFAIDLQNCGSTASG-VTVSFSGAADSRNTDLLAL 101

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1396648835 101 GEGPGIASGIGIALFDSQGQQLPLNRPPDRwVPLYRGPTT--LNFVAKYRATGRQVTGGAANAQAWFSLTYQ 170
Cdd:PRK15191  102 TAGESDASGIGIALYDQNKTLIPLGQESDV-VTLSPGQASahLQFYARYLADGGAVTPGDANASATFILAYE 172
PRK09733 PRK09733
fimbrial-like protein;
21-170 5.96e-19

fimbrial-like protein;


Pssm-ID: 182053  Cd Length: 181  Bit Score: 79.22  E-value: 5.96e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835  21 GSMRFQGLIMASSCRVEAGDRQMTVNLGQISSNRFHDvGEDSNPIPFAIHLQDC----STAVSQHVGVAFHGVA-DGKNP 95
Cdd:PRK09733   26 GIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKS-DQKSLAEPFTIHLQDCmlsqGGTTYSKAKVTFTTANtMTGQS 104

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1396648835  96 DVL-SVGEGP-GIASGIGIALFDSQGQQLPLNRPPDRWVPLYRGPTTLNFVAKYRATGRQVTGGAANAQAWFSLTYQ 170
Cdd:PRK09733  105 DLLkNTKETEiGGATGVGVRILDSQSGEVTLGTPVVITFNNTNSYQELNFKARMESPSKDATPGNVYAQADYKIAYE 181
PRK15190 PRK15190
fimbrial protein BcfE; Provisional
 22-170 3.43e-18

fimbrial protein BcfE; Provisional


Pssm-ID: 185112  Cd Length: 181  Bit Score: 77.43  E-value: 3.43e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835  22 SMRFQGLIMASSCRVEAGDRQMTVNLGQISSNRFHDVGEDSNPIPFAIHLQDCSTAVSQhVGVAFHGVADGKNPDVLSV- 100
Cdd:PRK15190   29 NLEFTGTIVAQTCDIDISSLSQSIDLGQFAVGDFPSTGTTTKFKPFNINLKNCSRGIAG-AKIWFTGEPDPDNPALLAIt 107

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1396648835 101 ----GEGPGIASGIGIALFDSQGQQLPLNRPPDRWVPLYRGPTTLNFVAKYRATGRQVTGGAANAQAWFSLTYQ 170
Cdd:PRK15190  108 dtgmGSGNMLASGVGVEILNDDQDTISINNADSVVYPLKAGRNTLSFYIRYKSTRPTVTSGNATAVMYFDMQYE 181
PRK15260 PRK15260
fimbrial protein SteF; Provisional
 14-170 1.85e-17

fimbrial protein SteF; Provisional


Pssm-ID: 185168  Cd Length: 178  Bit Score: 75.11  E-value: 1.85e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835  14 WNV--TLPGGS--MRFQGLIMASSCR-VEAGDRQMTVNLGQISSNRFhDVGEDSNPIPFAIHLQDCSTAVSQHVGVAFHG 88
Cdd:PRK15260   18 WAVcnTLPAATpnVHYSGKLVAGACNlVVDNDTMATVDFHTIGSDNF-DASGQTTPVPFTLSLQDCKTALANGVLVTFQG 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835  89 VADGKNPDVLSVgEGPGIASGIGIALFDSQGQQLPLNRPPDRWVPLYRGPTTLNFVAKYRAT-GRQVTGGAANAQAWFSL 167
Cdd:PRK15260   97 VEDSTLPGLLAL-EPSSEASGFAIGVETAAQQPVSINATVGTAFVLKEGITTINLQARLQKYaGEEVMPGEFSGSATVSF 175


                  ...
gi 1396648835 168 TYQ 170
Cdd:PRK15260  176 EYQ 178
PRK15205 PRK15205
long polar fimbrial protein LpfE; Provisional
 19-170 1.07e-16

long polar fimbrial protein LpfE; Provisional


Pssm-ID: 237923  Cd Length: 176  Bit Score: 73.35  E-value: 1.07e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835  19 PGGSMRFQGLIMASSCRVEAGDrqMTVNLGQISSNRFHDVGEDSNPIPFAIHLQDCSTAVSQHVgvAFHGVADGKNPDVL 98
Cdd:PRK15205   28 PAGDIHFTITIKAKACELEKDS--LEVDMGTMVLQKPVKVGTELNQKNFSIGLKDCDGISKASV--TMDGSPDPDDPSLF 103

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1396648835  99 SVGEGPgiASGIGIALFDSQG-QQLPLNR--PPDRWVPLYRGPTTLNFVAKYRATGRQVTGGAANAQAWFSLTYQ 170
Cdd:PRK15205  104 ALDAGG--ATGVALKIKTSKGtQQYPKSTdgTPVEWAINGDGTTQLNYIASYVPVNADATVGTANATVNFSVTYE 176
PRK15187 PRK15187
fimbrial protein BcfA; Provisional
 17-169 2.83e-16

fimbrial protein BcfA; Provisional


Pssm-ID: 185109  Cd Length: 180  Bit Score: 72.16  E-value: 2.83e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835  17 TLPGGSMRFQGLIMASSCRVEAGDRQMTVNLGQISSNRFHDVGEDSNPIP-FAIHLQDCSTAVSQHVGVAFHGVADGKNP 95
Cdd:PRK15187   28 TVTGGTVNFVGQVVDAACSVSADSVDQTVTLGQVRASKLTEAGMVANQKEdFTIKLEDCDTQTSQNAAVIFNGQQDANQP 107

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1396648835  96 DVLSVGEGPGIASGIGIALFDSQGQQLPLNRPPDRwVPLYRGPTTLNFVAKYRATGrQVTGGAANAQAWFSLTY 169
Cdd:PRK15187  108 GSLANTAGAGSATNVALQLYGPDGQALNIGESSST-VTLNDGENVIPLSVDYIATG-TATAGNVTATATFSMVY 179
lpfA PRK15289
fimbrial protein; Provisional
 21-170 5.51e-16

fimbrial protein; Provisional


Pssm-ID: 185189  Cd Length: 190  Bit Score: 71.53  E-value: 5.51e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835  21 GSMRFQGLIMASSCRVEAGDRQMTVNLGQISSNRFHDVGEDSNPIPFAIHLQDCSTAVSQhVGVAFHGVADGKNPDVLSV 100
Cdd:PRK15289   26 GVVHFVGEIVDTTCEVTSDTADQIVPLGKVSKNAFSGVGSLASPQKFSIKLENCPATYTQ-AAVRFDGTEAPGGDGDLKV 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835 101 G-----EGPG---------IASGIGIALFdsqgqqlplNRPPDRWVPLYR----------GPTTLNFVAKYRATGRQVTG 156
Cdd:PRK15289  105 GtpltaGNPGdftgtgqaiAATGVGIRIF---------NQSDNSQVKLYNdsaytaidaeGKAEMKFIARYVATNATVTA 175

                         170
                  ....*....|....
gi 1396648835 157 GAANAQAWFSLTYQ 170
Cdd:PRK15289  176 GTANADSQFTVEYK 189
PRK09934 PRK09934
fimbriae assembly protein;
27-169 6.14e-16

fimbriae assembly protein;


Pssm-ID: 182153 [Multi-domain]  Cd Length: 171  Bit Score: 71.07  E-value: 6.14e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835  27 GLIMASSCRVEAGDRQMTVNLGQISSNRFHDVGEDSNPIPFAIHLQDCSTAVsqhVGVAFHGVaDGKNPDVLSVGEgPGI 106
Cdd:PRK09934   33 GNVVDFTCTVNTADSDKTVDLGTWPTKQLLNAGDTTQPVPFSLKLEGCPPGS---ASITFTGT-PASDTNLLALDD-PAM 107

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1396648835 107 ASGIGIALFDSQGQQLPLNRPPDRWVPLYRGPTTLNFVAKYRATGRQVTGGAANAQAWFSLTY 169
Cdd:PRK09934  108 AQTVAIEIRDSDRSRLALGQASPTVEVDANGNATLNFYANYIALADGVQPGVAKADATFMINY 170
PRK15210 PRK15210
fimbrial protein;
21-169 1.09e-14

fimbrial protein;


Pssm-ID: 185132  Cd Length: 194  Bit Score: 68.19  E-value: 1.09e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835  21 GSMRFQGLIMASSCRVEAGDRQMTVNLGQISSNRFHDVGEDSNPIPFAIHLQDC-----------STAVSQHVGVAFHGV 89
Cdd:PRK15210   35 GKILFTGTITNSPCDIAPGDDAITVPFGQISYRKLNTADATTESKPFTIHLQNCafdpnipdtagSAGKMSKVTVSFSGT 114

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835  90 ADGKNPDVLSVgegpGIASGIGIALFDSQGQQL-----PLnrPPDRWVPLYRGPTTLNFVAKYRATGRQVTGGAANAQAW 164
Cdd:PRK15210  115 ANTSKKAYTTS----GSAQHVGVQLLKSDNTSIiepntPM--PDGDAQQLQAGNNELNFFARLIALDNGVTPGDFNASVT 188


                  ....*
gi 1396648835 165 FSLTY 169
Cdd:PRK15210  189 YTLKY 193
PRK15296 PRK15296
fimbrial protein SthA;
22-170 3.79e-12

fimbrial protein SthA;


Pssm-ID: 185196  Cd Length: 181  Bit Score: 61.26  E-value: 3.79e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835  22 SMRFQGLIMASSCRVEA-GDRQMTVNLGQISSNRFHDVGEDSNPIPFAIHLQDC---STAVSQHVGVAFHGVADGKNPDV 97
Cdd:PRK15296   25 TITFNGKIYDQACTVQVnGSTDTTIDLGNYSKERIAEKGATTDYVPFTVSLVSCpeaGTGVPTQAMFRFHGATDDSNPTY 104

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1396648835  98 L-SVGEGPGI-ASGIGIALFDSQGQQLPLNR-PPDRWVPLYRGPTTLNFVAKYRATGR-QVTGGAANAQAWFSLTYQ 170
Cdd:PRK15296  105 FkNADEGSETgAAGVGISIQNASHSDVTDNTdDAAVNLPTDGSTADFTYYAAMANDGSaTVTGGDVSTQVTYTVSYQ 181
PRK15300 PRK15300
fimbrial protein StiA; Provisional
 17-169 2.18e-10

fimbrial protein StiA; Provisional


Pssm-ID: 185200  Cd Length: 179  Bit Score: 56.64  E-value: 2.18e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835  17 TLPGGSMRFQGLIMASSCRVEAGDRQMTvnLGQISSNRFHDVGEDSNPIPFAIHLQDCSTAVSQHVGVAFHGVADGKNPD 96
Cdd:PRK15300   25 TAKDGTVHITGLIKQNACTVKTDSVEVT--LQEEFASLFTAAGQTAGDTDFTIELENCDANVYSSVQARFEGTLDGTDAT 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835  97 VLsvgEGPGIASGIGIALFDSQGQQLPLNrPPDRW-----VPLYRGPTTLN--FVAKYRATGRQVTGGAANAQAWFSLTY 169
Cdd:PRK15300  103 IL---KNEDDAENIGVQILDKTSTPMTFN-DLQAWsaavaLPTAEGVTELSmpFTARYIATAVPVKSGTVDATATFYLQY 178
PRK15283 PRK15283
fimbrial major subunit StfA;
21-169 2.53e-06

fimbrial major subunit StfA;


Pssm-ID: 185183  Cd Length: 186  Bit Score: 45.53  E-value: 2.53e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835  21 GSMRFQGLIMASSCRVEAGDRQMTVNLGQISSNRFHDvGEDSNPIPFAIHLQDCSTAVSQHVGVAFHGVAD--GKNPDVL 98
Cdd:PRK15283   29 GTVTFTGTIEDSPCSIVVGDEHQTVNLGHIGTGSLMG-GKESSKVDFHIGLENCAFTTEKEASTVFSAIGNesSANPGSV 107

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835  99 SV-----GEGPGIASGIG------IALFDSQGQQLPLNRppdrwvPLYRGPTTLNFVA--KYRATGRQVTGGAANAQAWF 165
Cdd:PRK15283  108 ALmriggGEMAGSSIVIGnhlgsaIKLGDAYSENLTMNG------SVAAAKQTLNFKAwvKGDSAASTIDTGEFSSTVNF 181


                  ....
gi 1396648835 166 SLTY 169
Cdd:PRK15283  182 TISY 185
PRK15292 PRK15292
type 1 fimbrial protein;
29-169 2.70e-06

type 1 fimbrial protein;


Pssm-ID: 237935 [Multi-domain]  Cd Length: 365  Bit Score: 46.10  E-value: 2.70e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835  29 IMASSCRVEAGDrqMTVNLGQISSNRFHD---VGEDSNPIPFAIhlqDCSTAVSQHVGVAfhgVADGKNPD----VLSVG 101
Cdd:PRK15292  194 MKAMGCRVETPA--LTFDMGSINAGSFANsqtVGTAEQDILLSC---EPGTNVSASVSAQ---PASGDNPDntviALSNA 265

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835 102 EGPGIASGIGIAL--------FDSQGqqLPLNRPpdrwVPLY---------RGP--------------------TTLNFV 144
Cdd:PRK15292  266 SAPTSATGVGVQLniqapdagFFTDS--LPINTK----IDLFtstrttnadGSQtvsysyftnpdspggamnmsTTLKIS 339

                         170       180
                  ....*....|....*....|....*
gi 1396648835 145 AKYRATGRQVTGGAANAQAWFSLTY 169
Cdd:PRK15292  340 ANYYKTGATVTAGQANATGTLTLTY 364
PRK15293 PRK15293
fimbrial protein SthD;
27-122 7.20e-05

fimbrial protein SthD;


Pssm-ID: 185193  Cd Length: 185  Bit Score: 41.20  E-value: 7.20e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835  27 GLIMASSCRVEAGDrqmTVNLGQISSNRFHDVGEDSNPIPFAIHLQDCsTAVSQHVGVAFHGVA--DGKNPDVLSVGEGP 104
Cdd:PRK15293   41 GLIYADPCTVTVPD---TLSLGQYARADIAVAGGNTATIPFTIKMTNC-PATTTKAAISFNGVPypDPNYASAIYANSAA 116

                          90
                  ....*....|....*...
gi 1396648835 105 GIASGIGIALFDSQGQQL 122
Cdd:PRK15293  117 NPAQDLGLQLFNLDGKSL 134
PRK15239 PRK15239
putative fimbrial protein StaA; Provisional
 20-170 1.37e-04

putative fimbrial protein StaA; Provisional


Pssm-ID: 185152  Cd Length: 197  Bit Score: 40.48  E-value: 1.37e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835  20 GGSMRFQGLIMASSC-RVEAGDRQMTVNLGQISSNRFH--DVGED-------SNPIPFAIHLqDCSTAVSQHVGVAF--- 86
Cdd:PRK15239   24 GGRINFEGLVSAETCkKVVSSAVGNSNIDGTVTLKTAHvsDVTAEvqnstagVNAEDFSIII-DCSDAGAGLVKSHLtms 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835  87 ------HGVADgkNPDVLSVGeGPGIASGIGIALFDSQ-GQQLPLNRPPD----RWVPLYRGPTTLNFVAKYRAT---GR 152
Cdd:PRK15239  103 ssfsntKGTLD--NDETLTRS-GIEAAKAVDIAVHHVDdANALSLVKINDpsntMEESFTNGIATYNFKASYVKSsdaGA 179

                         170
                  ....*....|....*...
gi 1396648835 153 QVTGGAANAQAWFSLTYQ 170
Cdd:PRK15239  180 SVTTGLVSTNAIYTFTYE 197
PRK15288 PRK15288
putative minor fimbrial subunit StfG; Provisional
 22-169 3.75e-04

putative minor fimbrial subunit StfG; Provisional


Pssm-ID: 185188 [Multi-domain]  Cd Length: 176  Bit Score: 39.25  E-value: 3.75e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835  22 SMRFQGLIMASSCRVE-AGDRQMTVNLGQISSNRFHDVGEDSNPiPFAIHLQDCSTAVSQHVGVAFHGVADGKNPDVLSV 100
Cdd:PRK15288   28 NLHFSGSLVASPCTLTmQGTGIAEVDFSSLDSSDFTPDGQSARK-PLVFELTDCDSALSNGVQVTFTGTEATGMRGILAI 106

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835 101 GEGPGiASGIGIALFDSQGQQLPLNRPPDRWVPLYRGPTTLNFVA-KYRATGRQVTGGAANAQAWFSLTY 169
Cdd:PRK15288  107 DSYSG-ASGIGIGIETLSGVPVGMNDEEGAIFTLVTGKNTLSLNAwVQRLPGEDLIPGRFSASALATFEY 175
PRK15247 PRK15247
fimbrial usher protein StbD;
12-170 2.37e-03

fimbrial usher protein StbD;


Pssm-ID: 185159  Cd Length: 441  Bit Score: 37.57  E-value: 2.37e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835  12 NQWNVTLPGGSMRFQGL--IMASSCRVEagDRQMTVNLGQISSNRFHDVGedSNPIPFAIHLQDCSTAVSQ-HVGVAFHG 88
Cdd:PRK15247  242 YGWPSYWPGAWSTYNSVtyVRGALCKIT--DYPAIVKIPPVAVGILAAGG--NSQAPFHVSLECESGAVSSaLPSTSAAN 317

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1396648835  89 VADG---KNPDV--------LSVGEG------------PGIASGIGIALFDSQGQqlPLNRPPDR----------WVPlY 135
Cdd:PRK15247  318 VAMGfvvNQPTAvaaarrlgLTTSAGglswlldthygePGVASGVGIRIYNDAGT--PINLLPDRiktgtgnargWYG-Y 394

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 1396648835 136 RGPTTL-----------NFVAKYRATGRQ-VTGGAANAQAWFSLTYQ 170
Cdd:PRK15247  395 KDLTTRvssgsvetysgDFTASLEAIGGQtVTAGSVNAQLQAVVSFQ 441
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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