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Conserved domains on  [gi|1317668744|gb|PLA59509|]
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PspC domain-containing protein [Streptococcus anginosus]

Protein Classification

PspC domain-containing protein( domain architecture ID 10005046)

PspC domain-containing protein similar to Escherichia coli envelope stress response membrane protein PspC that is involved in transcription regulation; the pspC gene is part of phage shock protein (psp) operon that may play a role in the competition for survival under nutrient- or energy-limited conditions

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PspC COG1983
Phage shock protein PspC (stress-responsive transcriptional regulator) [Transcription, Signal ...
 2-66 1.27e-10

Phage shock protein PspC (stress-responsive transcriptional regulator) [Transcription, Signal transduction mechanisms];


:

Pssm-ID: 441586 [Multi-domain]  Cd Length: 65  Bit Score: 51.69  E-value: 1.27e-10
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1317668744  2 KTTFYKLRRNRAVSGVLAGLSDKFGLDVGLVRFLFVLFTVSnFGLGIIIYIILSSVMPYKEDVEE 66
Cdd:COG1983    1 RKKLYRSRDDRVIAGVCAGLAEYFGIDPTLVRLIFVLLTLF-GGAGILLYLILWLLLPEAPTAAE 64
 
Name Accession Description Interval E-value
PspC COG1983
Phage shock protein PspC (stress-responsive transcriptional regulator) [Transcription, Signal ...
 2-66 1.27e-10

Phage shock protein PspC (stress-responsive transcriptional regulator) [Transcription, Signal transduction mechanisms];


Pssm-ID: 441586 [Multi-domain]  Cd Length: 65  Bit Score: 51.69  E-value: 1.27e-10
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1317668744  2 KTTFYKLRRNRAVSGVLAGLSDKFGLDVGLVRFLFVLFTVSnFGLGIIIYIILSSVMPYKEDVEE 66
Cdd:COG1983    1 RKKLYRSRDDRVIAGVCAGLAEYFGIDPTLVRLIFVLLTLF-GGAGILLYLILWLLLPEAPTAAE 64
PspC pfam04024
PspC domain; This family includes Phage shock protein C (PspC) that is thought to be a ...
 5-45 3.04e-10

PspC domain; This family includes Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.


Pssm-ID: 461134  Cd Length: 57  Bit Score: 50.89  E-value: 3.04e-10
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 1317668744  5 FYKLRRNRAVSGVLAGLSDKFGLDVGLVRFLFVLFTVSNFG 45
Cdd:pfam04024  3 LYRSRDDRMIAGVCGGLAEYFGIDPTLVRLLFVLLALFGGG 43
 
Name Accession Description Interval E-value
PspC COG1983
Phage shock protein PspC (stress-responsive transcriptional regulator) [Transcription, Signal ...
 2-66 1.27e-10

Phage shock protein PspC (stress-responsive transcriptional regulator) [Transcription, Signal transduction mechanisms];


Pssm-ID: 441586 [Multi-domain]  Cd Length: 65  Bit Score: 51.69  E-value: 1.27e-10
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1317668744  2 KTTFYKLRRNRAVSGVLAGLSDKFGLDVGLVRFLFVLFTVSnFGLGIIIYIILSSVMPYKEDVEE 66
Cdd:COG1983    1 RKKLYRSRDDRVIAGVCAGLAEYFGIDPTLVRLIFVLLTLF-GGAGILLYLILWLLLPEAPTAAE 64
PspC pfam04024
PspC domain; This family includes Phage shock protein C (PspC) that is thought to be a ...
 5-45 3.04e-10

PspC domain; This family includes Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.


Pssm-ID: 461134  Cd Length: 57  Bit Score: 50.89  E-value: 3.04e-10
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 1317668744  5 FYKLRRNRAVSGVLAGLSDKFGLDVGLVRFLFVLFTVSNFG 45
Cdd:pfam04024  3 LYRSRDDRMIAGVCGGLAEYFGIDPTLVRLLFVLLALFGGG 43
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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