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Conserved domains on  [gi|1317668737|gb|PLA59502|]
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MFS transporter [Streptococcus anginosus]

Protein Classification

multidrug efflux MFS transporter( domain architecture ID 13024410)

multidrug resistance (MDR) MFS transporter is a drug/H+ antiporter (DHA) that mediates the efflux of one or more from a variety of drugs and toxic compounds, and confer resistance to these compounds

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MFS_MdtG_MDR_like cd17391
Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the ...
2-363 4.19e-176

Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli multidrug resistance protein MdtG, Streptococcus pneumoniae multidrug resistance efflux pump PmrA, and similar multidrug resistance (MDR) transporters from bacteria. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtG confers resistance to fosfomycin and deoxycholate. PmrA serves as an efflux pump for various substrates and is associated with fluoroquinolone resistance. MdtG-like MDR transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


:

Pssm-ID: 340949 [Multi-domain]  Cd Length: 380  Bit Score: 495.25  E-value: 4.19e-176
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   2 GNFFIGASLSLVVPFMSLYVEELGA-RGSMVEFYSGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGL 80
Cdd:cd17391     4 GNFFTGIGFSLIAPFLPLYIEQLGVtSGGLVELWSGLAFSSTFLVSAIFSPIWGRLADRYGRKPMLLRASLGMAIVIGLM 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  81 AFVPNVFWLIVLRLLNGVFSGYVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGFF 160
Cdd:cd17391    84 AFVTNVWQLLILRLLQGVFSGYVPNATALIASQTPKEKSGWALGTLSTGVVAGTLIGPLLGGFLADLFGIRNVFFITGGL 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 161 LFVVTLWTIFGIKEDFHPVSKGKEVSTKQLFQRIPQKSILFGLFITSMVIQMIGQSISPILTLYIRSLGQKE-NLLLVSG 239
Cdd:cd17391   164 LFLAFLLTLFFVKEDFKPVEKKKMVSTKEVWNSVPNPSLLISLFVTTFIIQLANQSIEPILTLYIRQLMGDAsNLAFISG 243
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 240 AIVSAMGISSIFSSSWLGKLGDKMGNHRLLLLALLYSFVIYIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITP 319
Cdd:cd17391   244 LVFSATGVSSLLSAPRLGKLGDRIGHHRILLGALLASALLYIPQAFVQTPWQLGILRFLLGLATGGLLPAINSLLAKITP 323
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....
gi 1317668737 320 QEGISRIFSYNQTFFYIGGVIGPLMGSAISVHFGYHWVFYSTAG 363
Cdd:cd17391   324 KEVAGRIFGYNQSFQYLGNVAGPLLGSAIAAHFGYRAVFVVTAL 367
 
Name Accession Description Interval E-value
MFS_MdtG_MDR_like cd17391
Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the ...
2-363 4.19e-176

Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli multidrug resistance protein MdtG, Streptococcus pneumoniae multidrug resistance efflux pump PmrA, and similar multidrug resistance (MDR) transporters from bacteria. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtG confers resistance to fosfomycin and deoxycholate. PmrA serves as an efflux pump for various substrates and is associated with fluoroquinolone resistance. MdtG-like MDR transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340949 [Multi-domain]  Cd Length: 380  Bit Score: 495.25  E-value: 4.19e-176
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   2 GNFFIGASLSLVVPFMSLYVEELGA-RGSMVEFYSGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGL 80
Cdd:cd17391     4 GNFFTGIGFSLIAPFLPLYIEQLGVtSGGLVELWSGLAFSSTFLVSAIFSPIWGRLADRYGRKPMLLRASLGMAIVIGLM 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  81 AFVPNVFWLIVLRLLNGVFSGYVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGFF 160
Cdd:cd17391    84 AFVTNVWQLLILRLLQGVFSGYVPNATALIASQTPKEKSGWALGTLSTGVVAGTLIGPLLGGFLADLFGIRNVFFITGGL 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 161 LFVVTLWTIFGIKEDFHPVSKGKEVSTKQLFQRIPQKSILFGLFITSMVIQMIGQSISPILTLYIRSLGQKE-NLLLVSG 239
Cdd:cd17391   164 LFLAFLLTLFFVKEDFKPVEKKKMVSTKEVWNSVPNPSLLISLFVTTFIIQLANQSIEPILTLYIRQLMGDAsNLAFISG 243
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 240 AIVSAMGISSIFSSSWLGKLGDKMGNHRLLLLALLYSFVIYIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITP 319
Cdd:cd17391   244 LVFSATGVSSLLSAPRLGKLGDRIGHHRILLGALLASALLYIPQAFVQTPWQLGILRFLLGLATGGLLPAINSLLAKITP 323
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....
gi 1317668737 320 QEGISRIFSYNQTFFYIGGVIGPLMGSAISVHFGYHWVFYSTAG 363
Cdd:cd17391   324 KEVAGRIFGYNQSFQYLGNVAGPLLGSAIAAHFGYRAVFVVTAL 367
PRK09874 PRK09874
multidrug efflux MFS transporter MdtG;
1-363 1.83e-97

multidrug efflux MFS transporter MdtG;


Pssm-ID: 182127 [Multi-domain]  Cd Length: 408  Bit Score: 296.45  E-value: 1.83e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   1 MGNFFIGASLSLVVPFMSLYVEELGARG-SMVEFYSGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGG 79
Cdd:PRK09874   21 LGCFLTGAAFSLVMPFLPLYVEQLGVTGhSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVL 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  80 LAFVPNVFWLIVLRLLNGVFSGYVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGF 159
Cdd:PRK09874  101 MGLAQNIWQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITAS 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 160 FLFVVTLWTIFGIKEDFHPVSKGKEVSTKQLFQRIPQKSILFGLFITSMVIQMIGQSISPILTLYIRSL-GQKENLLLVS 238
Cdd:PRK09874  181 VLFLCFLVTLFCIRENFQPVSKKEMLHMREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELaGNVSNIAFIS 260
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 239 GAIVSAMGISSIFSSSWLGKLGDKMGNHRLLLLALLYSFVIYIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKIT 318
Cdd:PRK09874  261 GMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNS 340
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 1317668737 319 PQEGISRIFSYNQTFFYIGGVIGPLMGSAISVHFGYHWVFYSTAG 363
Cdd:PRK09874  341 SNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAG 385
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
1-338 8.07e-40

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 144.73  E-value: 8.07e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   1 MGNFFIGASLSLVVPFMSLYVEELGARGSMVefysGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGL 80
Cdd:COG2814    17 LGAFLSGLGIGIVLPALPLIAADLGASPAQA----GLVVTAYLLGAALGAPLAGRLADRFGRRRVLLLGLLLFALGSLLC 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  81 AFVPNVFWLIVLRLLNGVFSG-YVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGF 159
Cdd:COG2814    93 ALAPSLWLLLAARFLQGLGAGaLFPAALALIADLVPPERRGRALGLLGAGLGLGPALGPLLGGLLADLFGWRWVFLVNAV 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 160 FLFVVTLWTIFGIKEDFHPVSKGKEVSTKQLFQRipqkSILFGLFITSMVIQMIGQSISPILTLYIRSLGQKEnlLLVSG 239
Cdd:COG2814   173 LALLALLLLLRLLPESRPAARARLRGSLRELLRR----PRLLLLLLLAFLLGFGFFALFTYLPLYLQEVLGLS--ASAAG 246
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 240 AIVSAMGISSIFSSSWLGKLGDKMGNHRLLLLALLYSFVIYIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITP 319
Cdd:COG2814   247 LLLALFGLGGVLGALLAGRLADRFGRRRLLLIGLLLLALGLLLLALAGSLWLLLLALFLLGFGFGLLFPLLQALVAELAP 326
                         330
                  ....*....|....*....
gi 1317668737 320 QEGISRIFSYNQTFFYIGG 338
Cdd:COG2814   327 PEARGRASGLYNSAFFLGG 345
MFS_1 pfam07690
Major Facilitator Superfamily;
2-342 2.14e-30

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 119.06  E-value: 2.14e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   2 GNFFIGASLSLVVPFMSLYV-EELGARGSMVefysGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGL 80
Cdd:pfam07690   4 AAFLAALGRSLLGPALPLLLaEDLGISPTEI----GLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLL 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  81 AFVPNVFWLIVLRLLNGVFSG-YVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGF 159
Cdd:pfam07690  80 LFASSLWLLLVLRVLQGLGAGaLFPAALALIADWFPPEERGRALGLVSAGFGLGAALGPLLGGLLASLFGWRAAFLILAI 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 160 FLFVVTLWTIFGIKEDFHPVSKGKEVSTKQLFQRIPQ--KSILFGLFITSMVIQMIGQSISPILTLYIRSLGQKEnllLV 237
Cdd:pfam07690 160 LSLLAAVLLLLPRPPPESKRPKPAEEARLSLIVAWKAllRDPVLWLLLALLLFGFAFFGLLTYLPLYQEVLGLSA---LL 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 238 SGAIVSAMGISSIFSSSWLGKLGDKMGNHRLLLLALLYSFVIYIFCARAGTPLELGIYR---FLFGLGTGALLPGVSSLL 314
Cdd:pfam07690 237 AGLLLGLGGLLGAIGRLLLGRLSDRLGRRRRLLLALLLLILAALGLLLLSLTLSSLWLLlalLLLGFGFGLVFPALNALV 316
                         330       340
                  ....*....|....*....|....*...
gi 1317668737 315 NKITPQEGISRIFSYNQTFFYIGGVIGP 342
Cdd:pfam07690 317 SDLAPKEERGTASGLYNTAGSLGGALGP 344
2_A_01_02 TIGR00880
Multidrug resistance protein;
36-174 2.98e-14

Multidrug resistance protein;


Pssm-ID: 273318 [Multi-domain]  Cd Length: 141  Bit Score: 69.22  E-value: 2.98e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  36 GLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLRLLNGVFSGYV-PNSTALIASQA 114
Cdd:TIGR00880   1 GLLLAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFAlVAGAALIADIY 80
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 115 PKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGFFLFVVTLWTIFGIKE 174
Cdd:TIGR00880  81 PPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140
 
Name Accession Description Interval E-value
MFS_MdtG_MDR_like cd17391
Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the ...
2-363 4.19e-176

Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli multidrug resistance protein MdtG, Streptococcus pneumoniae multidrug resistance efflux pump PmrA, and similar multidrug resistance (MDR) transporters from bacteria. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtG confers resistance to fosfomycin and deoxycholate. PmrA serves as an efflux pump for various substrates and is associated with fluoroquinolone resistance. MdtG-like MDR transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340949 [Multi-domain]  Cd Length: 380  Bit Score: 495.25  E-value: 4.19e-176
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   2 GNFFIGASLSLVVPFMSLYVEELGA-RGSMVEFYSGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGL 80
Cdd:cd17391     4 GNFFTGIGFSLIAPFLPLYIEQLGVtSGGLVELWSGLAFSSTFLVSAIFSPIWGRLADRYGRKPMLLRASLGMAIVIGLM 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  81 AFVPNVFWLIVLRLLNGVFSGYVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGFF 160
Cdd:cd17391    84 AFVTNVWQLLILRLLQGVFSGYVPNATALIASQTPKEKSGWALGTLSTGVVAGTLIGPLLGGFLADLFGIRNVFFITGGL 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 161 LFVVTLWTIFGIKEDFHPVSKGKEVSTKQLFQRIPQKSILFGLFITSMVIQMIGQSISPILTLYIRSLGQKE-NLLLVSG 239
Cdd:cd17391   164 LFLAFLLTLFFVKEDFKPVEKKKMVSTKEVWNSVPNPSLLISLFVTTFIIQLANQSIEPILTLYIRQLMGDAsNLAFISG 243
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 240 AIVSAMGISSIFSSSWLGKLGDKMGNHRLLLLALLYSFVIYIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITP 319
Cdd:cd17391   244 LVFSATGVSSLLSAPRLGKLGDRIGHHRILLGALLASALLYIPQAFVQTPWQLGILRFLLGLATGGLLPAINSLLAKITP 323
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....
gi 1317668737 320 QEGISRIFSYNQTFFYIGGVIGPLMGSAISVHFGYHWVFYSTAG 363
Cdd:cd17391   324 KEVAGRIFGYNQSFQYLGNVAGPLLGSAIAAHFGYRAVFVVTAL 367
PRK09874 PRK09874
multidrug efflux MFS transporter MdtG;
1-363 1.83e-97

multidrug efflux MFS transporter MdtG;


Pssm-ID: 182127 [Multi-domain]  Cd Length: 408  Bit Score: 296.45  E-value: 1.83e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   1 MGNFFIGASLSLVVPFMSLYVEELGARG-SMVEFYSGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGG 79
Cdd:PRK09874   21 LGCFLTGAAFSLVMPFLPLYVEQLGVTGhSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVL 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  80 LAFVPNVFWLIVLRLLNGVFSGYVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGF 159
Cdd:PRK09874  101 MGLAQNIWQFLILRALLGLLGGFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITAS 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 160 FLFVVTLWTIFGIKEDFHPVSKGKEVSTKQLFQRIPQKSILFGLFITSMVIQMIGQSISPILTLYIRSL-GQKENLLLVS 238
Cdd:PRK09874  181 VLFLCFLVTLFCIRENFQPVSKKEMLHMREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELaGNVSNIAFIS 260
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 239 GAIVSAMGISSIFSSSWLGKLGDKMGNHRLLLLALLYSFVIYIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKIT 318
Cdd:PRK09874  261 GMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNS 340
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 1317668737 319 PQEGISRIFSYNQTFFYIGGVIGPLMGSAISVHFGYHWVFYSTAG 363
Cdd:PRK09874  341 SNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAG 385
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
2-363 5.96e-51

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 174.69  E-value: 5.96e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   2 GNFFIGASLSLVVPFMSLYVEELGARGSMVefysGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLA 81
Cdd:cd17325     4 ALFLDMLGYGIIIPILPLYAESLGASVAQI----GLIVAAYALAQLLFSPPAGRLSDRFGRKRLLLLGLLLLAVSTLLFA 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  82 FVPNVFWLIVLRLLNGVFSG-YVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGFF 160
Cdd:cd17325    80 FATSYWQLLLARFLQGLASAaVWPAAMALIADIAPPEERGRAMGIFSSAIGLGFLIGPLLGGLLADALGYRAPFLVCAAL 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 161 LFVVTLWTIFGIKEDFHPVSKGK--EVSTKQLFQRIPQKSILFGLFITSMVIQMIGQSISPILTLYIRSLGQKENLLLvs 238
Cdd:cd17325   160 ALLALVLALLLLPEPRPPPNKRAvsAARLRSGLRLLLRDRRLLALFLAIFVLAFAFGALEPFLPLYAAELGGLSPAQI-- 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 239 GAIVSAMGISSIFSSSWLGKLGDKMGNHRLLLLALLYSFVIYIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKIT 318
Cdd:cd17325   238 GLLFGAQGLASALSQPPAGKLSDRIGRKPLILIGLLLSAVALLLLPLATSFWLLLLLLALLGLGLGLVFPATLALLADIV 317
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 1317668737 319 PQEGISRIFSYNQTFFYIGGVIGPLMGSAISVHFGYHWVFYSTAG 363
Cdd:cd17325   318 PPEGRGTAMGLFNTAFSLGMVLGPLLGGFLYDAFGFATPFLAAAA 362
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
1-338 8.07e-40

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 144.73  E-value: 8.07e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   1 MGNFFIGASLSLVVPFMSLYVEELGARGSMVefysGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGL 80
Cdd:COG2814    17 LGAFLSGLGIGIVLPALPLIAADLGASPAQA----GLVVTAYLLGAALGAPLAGRLADRFGRRRVLLLGLLLFALGSLLC 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  81 AFVPNVFWLIVLRLLNGVFSG-YVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGF 159
Cdd:COG2814    93 ALAPSLWLLLAARFLQGLGAGaLFPAALALIADLVPPERRGRALGLLGAGLGLGPALGPLLGGLLADLFGWRWVFLVNAV 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 160 FLFVVTLWTIFGIKEDFHPVSKGKEVSTKQLFQRipqkSILFGLFITSMVIQMIGQSISPILTLYIRSLGQKEnlLLVSG 239
Cdd:COG2814   173 LALLALLLLLRLLPESRPAARARLRGSLRELLRR----PRLLLLLLLAFLLGFGFFALFTYLPLYLQEVLGLS--ASAAG 246
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 240 AIVSAMGISSIFSSSWLGKLGDKMGNHRLLLLALLYSFVIYIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITP 319
Cdd:COG2814   247 LLLALFGLGGVLGALLAGRLADRFGRRRLLLIGLLLLALGLLLLALAGSLWLLLLALFLLGFGFGLLFPLLQALVAELAP 326
                         330
                  ....*....|....*....
gi 1317668737 320 QEGISRIFSYNQTFFYIGG 338
Cdd:COG2814   327 PEARGRASGLYNSAFFLGG 345
MFS_YfcJ_like cd17489
Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; ...
1-363 4.87e-35

Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341042 [Multi-domain]  Cd Length: 367  Bit Score: 132.33  E-value: 4.87e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   1 MGNFFIGASLSLVVPFMSLYVEELGARGSMVefysGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGL 80
Cdd:cd17489     3 LANFFFFLSFYLLLPVLPLYAHDLGGSEAVA----GLVVGLFTLAALLARPFAGRLLDRFGRKRLLLIGLLIFALATLLY 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  81 AFVPNVFWLIVLRLLNGV-FSGYVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGF 159
Cdd:cd17489    79 LLATSVALLLVLRLIHGIgWGAFTTAAATLVADIIPPSRRGEGIGYYGLATTLAMALGPALGLFLYQHLGFAVLFIVAAV 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 160 FLFVVTLwTIFGIKEDFHPVSKGKEVSTKQLFQRIPQKSILFGLFItsMVIQMIGQSISPILTLYIRSLGQKenlllVSG 239
Cdd:cd17489   159 LALLALL-LVFLVKDPPPVAAEEAEAGTRAFRRLVEKKVLPPALIL--FLASIAYGAISTFLPLYAAERGIS-----NAG 230
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 240 AIVSAMGISSIFSSSWLGKLGDKMGNHRLLLLALLYSFVIYIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITP 319
Cdd:cd17489   231 LFFTVYAIALLLSRPFSGKLSDRKGPKTVIIPGLLLLALGLLLLSFAGSPWMLLLAAVLYGLGFGLLFPALQALAVDLVP 310
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....
gi 1317668737 320 QEGISRIFSYNQTFFYIGGVIGPLMGSAISVHFGYHWVFYSTAG 363
Cdd:cd17489   311 PHRRGAANGTFFIFFDLGIGLGGLLLGLVAELFGYRAMFLLAAV 354
MFS_SLC46_TetA_like cd17330
Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and ...
9-363 6.17e-32

Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of the eukaryotic proteins MFSD9, MFSD10, MFSD14, and SLC46 family proteins, as well as bacterial multidrug resistance (MDR) transporters such as tetracycline resistance protein TetA and multidrug resistance protein MdtG. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. TetA proteins confer resistance to tetracycline while MdtG confers resistance to fosfomycin and deoxycholate. The Solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3), the best-studied of which is SLC46A1, which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. MFSD10 facilitates the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs) and confers resistance to such NSAIDs. The SLC46/TetA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340888 [Multi-domain]  Cd Length: 349  Bit Score: 123.46  E-value: 6.17e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   9 SLSLVVPFMSLYVEELGARGSmVEFYSGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFW 88
Cdd:cd17330    11 GFGIVFPVLPFYVREFNKLGA-SGYYVGLLQSSYSLGQFLASPLWGRLSDRYGRKPVLLLSLAGSAVSYVLLGLSRNLWL 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  89 LIVLRLLNGVFSGYVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGFFLFVVTLWT 168
Cdd:cd17330    90 LFLARFLDGLTGGNVSVAQAYIADITDEEERAKAFGIISAAFGLGFILGPALGGFLSTPYGYALPFLVAAALALLNLVLV 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 169 IFGIKedfhpvskgkevstkqlfqripqksILFGLFITSMVIQMIGQSISPILTLYIRSLGQKENLLLvsGAIVSAMGIS 248
Cdd:cd17330   170 LFFLP-------------------------PLRRLLLVYFLIALAFAGLESVFSLFLKDRFGFSPSQI--GLLLALVGIA 222
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 249 SIFSSSWL-GKLGDKMGNHRLLLLALLYSFVIYIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITPQEGISRIF 327
Cdd:cd17330   223 GILAQLLLiPRLAKRLGERKLLRLGLLLAIIGLLLLPFASSVPLLVLAAAILAFGTGIVFPALSALLSKSVPSKEQGKAQ 302
                         330       340       350
                  ....*....|....*....|....*....|....*.
gi 1317668737 328 SYNQTFFYIGGVIGPLMGSAISVHFGYHWVFYSTAG 363
Cdd:cd17330   303 GIIQSLQSLARIIGPLLAGPLYSFLGPGVPFLLAAG 338
MFS_NepI_like cd17324
Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator ...
1-363 5.93e-31

Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340882 [Multi-domain]  Cd Length: 370  Bit Score: 121.12  E-value: 5.93e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   1 MGNFFIGASLSLVVPFMSLYVEELGargsMVEFYSGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGL 80
Cdd:cd17324     6 LAAFAIGTTEYVIQGLLPDIARDFG----VSVAQAGLLVSAYALGYALGALLLGPLSDRIERRRLLLVLLLLFILGNLLA 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  81 AFVPNVFWLIVLRLLNGVF-SGYVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGF 159
Cdd:cd17324    82 ALAPSFALLLLARALAGLAhGGFWAIAAAYAADLVPPEKRGRAIGLVFSGLTLGLVLGRPLGGLLGQLLGWRAAFLAIAV 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 160 FLFVVTLWTIFGIKED--FHPVSKGKEVSTKQLFQRIPQKSILFGLFITSMVIQMIGQSISPILTLYIRSLGQKENLLLV 237
Cdd:cd17324   162 LALLAALLLWRLLPSLppKKPGSLGLLSSLLLLLRNPRLRLAYLITFLLFGGFFALYTYLAPFLTDVPGFSSSAIIGLLL 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 238 sgaivsAMGISSIFSSSWLGKLGDKMGNHRLLLLALLYSFVIYIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKI 317
Cdd:cd17324   242 ------LFGVAGVVGSPLAGRLADRGGRRALLIALLLLAAALLLLTLLGPSPLLLLVGLVLWGLGFFAAHSALQTRVLRL 315
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*.
gi 1317668737 318 TPqEGISRIFSYNQTFFYIGGVIGPLMGSAISVHFGYHWVFYSTAG 363
Cdd:cd17324   316 AP-EARGLASSLYLAAYNLGGALGAALGGLVLDHGGWAGVGWVGAA 360
MFS_1 pfam07690
Major Facilitator Superfamily;
2-342 2.14e-30

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 119.06  E-value: 2.14e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   2 GNFFIGASLSLVVPFMSLYV-EELGARGSMVefysGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGL 80
Cdd:pfam07690   4 AAFLAALGRSLLGPALPLLLaEDLGISPTEI----GLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLLLL 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  81 AFVPNVFWLIVLRLLNGVFSG-YVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGF 159
Cdd:pfam07690  80 LFASSLWLLLVLRVLQGLGAGaLFPAALALIADWFPPEERGRALGLVSAGFGLGAALGPLLGGLLASLFGWRAAFLILAI 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 160 FLFVVTLWTIFGIKEDFHPVSKGKEVSTKQLFQRIPQ--KSILFGLFITSMVIQMIGQSISPILTLYIRSLGQKEnllLV 237
Cdd:pfam07690 160 LSLLAAVLLLLPRPPPESKRPKPAEEARLSLIVAWKAllRDPVLWLLLALLLFGFAFFGLLTYLPLYQEVLGLSA---LL 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 238 SGAIVSAMGISSIFSSSWLGKLGDKMGNHRLLLLALLYSFVIYIFCARAGTPLELGIYR---FLFGLGTGALLPGVSSLL 314
Cdd:pfam07690 237 AGLLLGLGGLLGAIGRLLLGRLSDRLGRRRRLLLALLLLILAALGLLLLSLTLSSLWLLlalLLLGFGFGLVFPALNALV 316
                         330       340
                  ....*....|....*....|....*...
gi 1317668737 315 NKITPQEGISRIFSYNQTFFYIGGVIGP 342
Cdd:pfam07690 317 SDLAPKEERGTASGLYNTAGSLGGALGP 344
MFS_MdtH_MDR_like cd17329
Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the ...
2-359 5.07e-28

Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340887 [Multi-domain]  Cd Length: 376  Bit Score: 113.09  E-value: 5.07e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   2 GNFFIGASLSLVVPFMSLYV-EELGARGSMVefysGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGL 80
Cdd:cd17329     7 GSFLNRLGFFMVWPFMAIYLhQQLGLSASIV----GLVLALSAVAGIVASLIGGRLADRFGRKPVMLAGLLLRALGFALL 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  81 AFVPNVFWLIVLRLLNGVFSG-YVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQsLGMRNVFLLVGF 159
Cdd:cd17329    83 GFAHSPWLFAIALVLTGFGGGlFEPASEAMIADVTTPENRTRAFSLLYWAINLGVAIGPLLGGLLLL-YSFRLLFLAAAV 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 160 FLFVVTLWTIFGIKEDFHPVSKGKEVSTKQLFQRIPQKSILFGLFITSMVIQMIGQSISPILTLY---IRSLGQKE--NL 234
Cdd:cd17329   162 LFLLAALVLLFLLPETRPKRRAAEKTEILRGYKIVLRDRAFLLFLLASFLISLIYFQLESTLPVYvveILGLGESLlgLL 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 235 LLVSGAIVSAMGIssifsssWLGKLGDKMGNHRLLLLALLYSFVIYIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLL 314
Cdd:cd17329   242 LALNALLIVLLQF-------PVARLVERFRLRKILMIGILLFAIGFAVLAFANTLAVLILAMIVLTLGEMLVFPAVQTLV 314
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 1317668737 315 NKITPQEGISRIFSYNQTFFYIGGVIGPLMGSAISVHFGYHWVFY 359
Cdd:cd17329   315 AALAPPDKRGSYMGFYALAWGLGRAIGPLVGGLLLDLLGPGLPWL 359
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
3-363 3.76e-25

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 104.95  E-value: 3.76e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   3 NFFIGASLSLVVPFMSlyvEELGArgSMVEFysGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAF 82
Cdd:COG2271    22 NYLDRSNLSVAAPPLQ---ADLGL--SAAQL--GLLASAFFLGYALGQIPAGLLADRFGRRRVLAIGLLLWGLATLLFGF 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  83 VPNVFWLIVLRLLNGVF-SGYVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGFFL 161
Cdd:COG2271    95 ATSFWQLLLLRFLLGLGeAGFFPAALKLIAEWFPPKERGRALGIFNAGGPLGGALAPPLLGWLLAAFGWRAAFLILGLPG 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 162 FVVTLWTIfgikedfhpvskgkevstkqlfqripqksilFGLFITSMVIQMIGQSISPILTLYIRSLGQKEnlLLVSGAI 241
Cdd:COG2271   175 LLLALLRF-------------------------------WLLALAYFLVYFALYGFLTWLPTYLVEVRGLS--LAQAGLL 221
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 242 VSAMGISSIFSSSWLGKLGDKMGNHRLLLLALLY--SFVIYIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITP 319
Cdd:COG2271   222 LSLPFLAGIVGSLLGGWLSDRLGRRRKLVLAIGLllAALALLLLALLPSPALAIALLFLAGFGLGGAFGLLWALAAELFP 301
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....
gi 1317668737 320 QEGISRIFSYNQTFFYIGGVIGPLMGSAISVHFGYHWVFYSTAG 363
Cdd:COG2271   302 KKARGTASGLVNTFGFLGGALGPLLVGYLLDATGYQAAFLLLAA 345
MFS_MefA_like cd06173
Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of ...
33-363 4.60e-22

Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340863 [Multi-domain]  Cd Length: 383  Bit Score: 96.53  E-value: 4.60e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  33 FYSGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVP-----NVFWLIVLRLLNGVFSG-YVPNS 106
Cdd:cd06173    34 LLVGLVLAAFFLPFLLFSPFAGVLADRFDRRRLLILADLLRALLAAVLALLAllgslSLWLLLVLAFLLGIASAfFGPAR 113
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 107 TALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGFfLFVVTLWTIFGIKEDFHPVSKGKEV- 185
Cdd:cd06173   114 QALLPELVPKEQLVRANALNSLATQLARIIGPALGGLLVALLGPGGAFAINAL-SFLLSALLLLFIRRPPPAAPGESSSl 192
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 186 ---STKQLFQRIPQKSILFGLFITSMVIQMIGQSISPILTLYIRSLGQKENLLLvsGAIVSAMGISSIFSSSWLGKLGDK 262
Cdd:cd06173   193 llrDLREGLRYLRRSPLLRLLLLALALFALLGGALTVLLPLLAKEVLGGGAAGY--GLLLAAFGVGALLGALLLGRLSKR 270
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 263 MGNHRLLLLALLYSFVIYIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITPQEGISRIFSYNQTFFYIGGVIGP 342
Cdd:cd06173   271 RRRGRLLLIGALLLGLALLVLGLSPSLWLLLAALFLLGLAGGLFNVPLNTLLQLRVPDELRGRVFSVYNALNSGAMPLGA 350
                         330       340
                  ....*....|....*....|.
gi 1317668737 343 LMGSAISVHFGYHWVFYSTAG 363
Cdd:cd06173   351 LLAGLLADALGLSAVFLLAGA 371
MFS_YfmO_like cd17474
Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major ...
11-363 1.40e-20

Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily; This family is composed of Bacillus subtilis multidrug efflux protein YfmO, bacillibactin exporter YmfD/YmfE, uncharacterized MFS-type transporter YvmA, and similar proteins. YfmO acts to efflux copper or a copper complex, and could contribute to copper resistance. YmfD/YmfE is involved in secretion of bacillibactin. The YfmO-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341027 [Multi-domain]  Cd Length: 374  Bit Score: 92.25  E-value: 1.40e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  11 SLVVPFMSLYVEELGARGSMVefysGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLI 90
Cdd:cd17474    16 SIVDPILPAIAEALGASPAQV----GLLITAFTLPAAVLMPVAGVLADRFGRKKVLLPGLLLFGIGGLLCGLSDSFALLL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  91 VLRLLNGV-FSGYVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAqSLGMRNVFLLVGFFLFVVTLWTI 169
Cdd:cd17474    92 AGRALQGIgAAGLGPLALTLIGDLFEGGERAKAMGLYEAALGLGIAVGPLLGGLLA-AISWRYPFFLLAALIPVAFLAIL 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 170 FGIKEDFHPVSKGKEVSTKQLFQRipQKSILFGLFITSMVIQMIGqsISPILTLYIRSLGQKENLL-LVSGAIVSAMGIS 248
Cdd:cd17474   171 FLLPEPKEKAKSSSATKLRDLKKA--LRGRGLLTFLVSAFLYFFL--YFAFLTYLPFLLELLYGISpIIIGLLFAGWSVL 246
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 249 SIFSSSWLGKLGDKMGNHRLLLLAllySFVIYIFC----ARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITPQEGIS 324
Cdd:cd17474   247 LALGSLFVGRLLKKRFGARRILVI---GLLLYALSllllGFVPSLALLLIAIVLFGLGLGLNLPLLTTLVTELAPEEERG 323
                         330       340       350
                  ....*....|....*....|....*....|....*....
gi 1317668737 325 RIFSYNQTFFYIGGVIGPLMGSAISVHFGYHWVFYSTAG 363
Cdd:cd17474   324 TASSLYNFVRFLGQAVGPLLFGLLLEIFGLSAPFLVGAA 362
ProP COG0477
MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and ...
1-170 1.84e-20

MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and metabolism, Amino acid transport and metabolism, Inorganic ion transport and metabolism, General function prediction only];


Pssm-ID: 440245 [Multi-domain]  Cd Length: 295  Bit Score: 90.64  E-value: 1.84e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   1 MGNFFIGASLSLVVPFMSLYVEELGARGSMVefysGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGL 80
Cdd:COG0477    21 LGTFLEGLDFTIVNVALPSIAADLGASSAQL----GWIVSAYLLGRAIGLLLFGRLGDRYGRKRVLLIGLLLFGLASLLC 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  81 AFVPNVFWLIVLRLLNGVFSGY-VPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGF 159
Cdd:COG0477    97 GLAPSPELLIAARALQGIGAGGlMPGALALIAELFPARERGRALGLWGAAIGLGLALGPLLGGLLVAALGWRWIFLINAP 176
                         170
                  ....*....|.
gi 1317668737 160 FLFVVTLWTIF 170
Cdd:COG0477   177 LGLLALVLRLR 187
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
1-363 2.36e-19

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 88.64  E-value: 2.36e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   1 MGNFFIGASLSLVVPFMSLYVEELGARGSMVefysGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGL 80
Cdd:cd06174     3 LGFFLTGLARGLISPLLPALLQSFGLSASQL----GLLFALFSLGYALLQPLAGLLADRFGRRPVLLLGLLLFALGALLF 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  81 AFVPNVFWLIVLRLLNGVFSG-YVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSL--GMRNVFLLV 157
Cdd:cd06174    79 AFAPSFWLLLLGRFLLGLGSGlIDPAVLALIADLFPERERGRALGLLQAFGSVGGILGPLLGGILASSLgfGWRAVFLIA 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 158 GFFLFVVTLWTIFGIKEDFHPVSKGKEV----STKQLFQRIPQKSILFGLFITSMVIQMIGQSISPILTLYIRSLGQKen 233
Cdd:cd06174   159 AALALLAAILLLLVVPDPPESARAKNEEasskSVLKLLKRVLKNPGLWLLLLAIFLVNLAYYSFSTLLPLFLLDLGGL-- 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 234 LLLVSGAIVSAMGISSIFSSSWLGKLGDKMGNHRLLLLALLYSFVI-YIFCARAGTPLELGIYRFLFGLGTGALLPGVSS 312
Cdd:cd06174   237 SVAVAGLLLSLFGLAGALGSLLLGLLSDRLIGRKPLLLIGLLLMALgLALLLLAPSLLLLLLLLLLLGFGLGGLLPLSFA 316
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1317668737 313 LLNKITPQEGISRIFSYNQTFFYIGGVIGPLMGSAISV-HFGYHWVFYSTAG 363
Cdd:cd06174   317 LIAELFPPEIRGTAFGLLNTFGFLGGAIGPLLAGFLLAaTFGLTGAFLVLAV 368
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
36-363 2.45e-19

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 88.78  E-value: 2.45e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  36 GLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLRLLNGVFSGYV-PNSTALIASQA 114
Cdd:COG2223    43 GLLFAIPVLVGALLRIPLGFLVDRFGPRRVLLIGLLLLGIGLLLLALAVSYWLLLLLGLLLGIGGGGSfAVGIALVSKWF 122
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 115 PKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGFFLFVVTLWTIFGIKEDFHPVSKGKEVSTKQLFQRI 194
Cdd:COG2223   123 PPDRRGLALGLAAGGGNLGAAVAAFLAPLLIAAFGWRNAFLILGILLLVVAVLAWLFLRDPPAGAAAAAKASLRDQLEAL 202
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 195 PQKSILFgLFITSMVIQMIGQSISPILTLYIRSlgQKENLLLVSGAIVSAMGISSIFSSSWLGKLGDKMGNHRLLLLALL 274
Cdd:COG2223   203 RDPRFWL-LSLLYFGTFGSFIGFSSWLPPYLVD--QFGLSAATAGLLAALFALLGALGRPLGGWLSDRIGGRRVLLIVFA 279
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 275 YSFVIYIFCARAGTPLELGIYRF-LFGLGTGALLPGVSSLLNKITPQEGISRIFSYNQTFFYIGGVIGPLMGSAISVHFG 353
Cdd:COG2223   280 LMALGLLLLALALGSLWLFLVLFlLLGLALGGGNGAVFALVPDIFPTKNAGAVYGLVGAAGGLGGFLGPLLFGALLDATG 359
                         330
                  ....*....|.
gi 1317668737 354 -YHWVFYSTAG 363
Cdd:COG2223   360 sYTAAFLVFAV 370
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
4-172 3.03e-19

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 88.40  E-value: 3.03e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   4 FFIGASLSLVVPFMSLYVEELGArgsMVEFYSGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFV 83
Cdd:cd17325   209 FVLAFAFGALEPFLPLYAAELGG---LSPAQIGLLFGAQGLASALSQPPAGKLSDRIGRKPLILIGLLLSAVALLLLPLA 285
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  84 PNVFWLIVLRLLNGVFSG-YVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGFFLF 162
Cdd:cd17325   286 TSFWLLLLLLALLGLGLGlVFPATLALLADIVPPEGRGTAMGLFNTAFSLGMVLGPLLGGFLYDAFGFATPFLAAAALLL 365
                         170
                  ....*....|
gi 1317668737 163 VVTLWTIFGI 172
Cdd:cd17325   366 LAAVLFLLLR 375
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
1-354 2.32e-18

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 86.11  E-value: 2.32e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   1 MGNFFIGASLSLVVPFMSL-YVEELGARGSMVefysGLAVSSTALTAALLSPVWGSLADRYG-----RKPMMIRAA---- 70
Cdd:COG2211    17 LGDLGLNLAFGLLSAYLLYfYTDVLGLSAALV----GLILLVARLWDAITDPLIGALSDRTRtrwgrRRPWILIGAipla 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  71 --FAMTFTMGGLAFVPNVFWLIVLRLLNGV-FSGYVPNSTALIASQAPKKH-----SGYALGTLSTGVVAGTLMGPLLGG 142
Cdd:COG2211    93 lsFVLLFTAPDLSPTGKLIYALVTYLLLGLaYTLVNIPYSALGAELTPDYEertrlSSWRFAFAGLGGLLASVLPPPLVA 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 143 MVA--QSLGMRNVFLLVGFFLFVVTLWTIFGIKEdfHPVSKGKEVSTKQLFQRIPQKSILFGLFITSMVIQMIGQSISPI 220
Cdd:COG2211   173 AFGgdAALGYRLTALIFAVLGLLAFLLTFFGTKE--RPVPEEEKVSLKESLKALLKNRPFLLLLLAYLLFFLALALVAAL 250
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 221 LTLYIRS-LGQKENLLlvsGAIVSAMGISSIFSSSWLGKLGDKMGNHRLLLLALLYSFVIYI--FCARAGTPLELGIYRF 297
Cdd:COG2211   251 LLYYFKYvLGLSAALV---GLLLALYFLAALLGAPLWPRLAKRFGKKKAFIIGLLLAALGLLllFFLGPGNLWLLLVLAA 327
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1317668737 298 LFGLGTGALLPGVSSLLNKITP---------QEGIsrIFSYNQTFFYIGGVIGPLMGSAISVHFGY 354
Cdd:COG2211   328 LAGIGLGAILVLPWAMLADVVDydewktgrrREGL--YFGIFTFAIKLGQALAGALAGLLLALFGY 391
MFS_MMR_MDR_like cd17321
Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance ...
38-352 2.70e-17

Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340879 [Multi-domain]  Cd Length: 370  Bit Score: 82.61  E-value: 2.70e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  38 AVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLRLLNGVFSG-YVPNSTALIASQAPK 116
Cdd:cd17321    36 VVNAYLLAFAALLLLAGRLGDRFGRKRVFLIGLALFGLASLLCALAPSLAFLIAARALQGIGAAaIMPASLALIAATFPG 115
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 117 KHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGFFLFVVTLWTifgikedfhpvskgkevstkqlfqripq 196
Cdd:cd17321   116 ERRGRALGLWGAVVGIGAALGPLLGGLLLELFGWRWIFLINVPIGLVALLLA---------------------------- 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 197 kSILFGLFITSMVIQMIGQSISPILTLYIRSLGQKEnlLLVSGAIVSAMGISSIFSSSWLGKLGDKMGNHRLLLL---AL 273
Cdd:cd17321   168 -RTFSGAVLAAFLLGAALGGLLFLLPLYLQGVLGYS--PLQAGLALLPLALAMLVAAPLAGRLADRFGPRLVLVAgllLT 244
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1317668737 274 LYSFVIYIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITPQEGISRIFSYNQTFFYIGGVIGPLMGSAISVHF 352
Cdd:cd17321   245 AVGLLLLALLGADSSVWLLLPGLVLLGLGLGLFATPLTNAALSSVPKEKAGAASGILNTARQLGGALGVALLGALLTAG 323
MFS_YxlH_like cd17490
Bacillus subtilis YxlH and similar transporters of the Major Facilitator Superfamily; This ...
9-359 2.84e-17

Bacillus subtilis YxlH and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Bacillus subtilis YxlH uncharacterized MFS-type transporter YxlH and similar proteins. The biological function of YxlH remains unclear. The YxlH-like subfamily belongs to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341043 [Multi-domain]  Cd Length: 371  Bit Score: 82.27  E-value: 2.84e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   9 SLSLVVPFMSLYVEELGARGSMVefysGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMT-FTMGGLAFVPNVF 87
Cdd:cd17490    11 SQYVYVPFLSPYAESLGASLSMI----GIILGAYGISQMLLRIPLGILSDRIGKRKLFIIIGLLFTvLASLIMILFPSPW 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  88 WLIVLRLLNGVFSGYVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFlLVGFFLFVVTLW 167
Cdd:cd17490    87 GLLIARFLSGIAAATWVSFTVLYASYFPPDEAAKAMGLINLVNNLGQLIAFLIGGLIAEHFGMRAPF-LLAALAGVLGFI 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 168 TIFGIKEDfHPVSKGKEVSTKQLFQRIPQKSILFgLFITSMVIQMIGQSISPILT-LYIRSLGQKENLLLVSGAIVSAMG 246
Cdd:cd17490   166 LSLFIKEE-RREKKPVLTELKELLSVLKDKKLLF-FSLLAILQQMITFSTTFGFTpLIAKQLGASSFQLGLLSIIYLLPN 243
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 247 ISSIFSSSWlgKLGDKMGNHRLLLLALLYSFVIYIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITPQEGISRI 326
Cdd:cd17490   244 ALASLLSGT--LFYKKLGERNTIIIGFLLLGAYCFLIPFAPNLTLLYLLQALNGFGTGILFPLLMSLSIEGVPAEQRSTA 321
                         330       340       350
                  ....*....|....*....|....*....|...
gi 1317668737 327 FSYNQTFFYIGGVIGPLMGSAISVHFGYHWVFY 359
Cdd:cd17490   322 MGFFQAIYALGMFLGPVLVGIISEAFGLQTGFF 354
MFS_arabinose_efflux_permease_like cd17473
Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; ...
31-363 4.74e-17

Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; This family includes a group of putative arabinose efflux permease family transporters, such as alpha proteobacterium quinolone resistance protein NorA (characterized Staphylococcus aureus Quinolone resistance protein NorA belongs to a different group), Desulfovibrio dechloracetivorans bacillibactin exporter, Vibrio aerogenes antiseptic resistance protein. The biological function of those transporters remain unclear. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341026 [Multi-domain]  Cd Length: 374  Bit Score: 81.85  E-value: 4.74e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  31 VEFYSGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLRLLNGVFSGYV-PNSTAL 109
Cdd:cd17473    33 SELLVPLLLTLPALFIALFAPLAGWLADRFGRKRLLIAGLLLYGIGGVAGLFLDSLYALLASRALLGIGVAGImTLATAL 112
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 110 IASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAqSLGMRNVFL--LVGFFLFVVTLWTIFGIKedfhPVSKGKEVST 187
Cdd:cd17473   113 IGDYFEGEERAKMLGLQSAAMSLGGVVFLLLGGALA-EIGWRAPFLvyLLALPVLILVLLFLPEPA----RKSKSAASPG 187
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 188 KQLFQRIPQKSILFGLFITsmVIQMIGQSISPI-LTLYIRSLGQKENLllVSGAIVSAMGISSIFSSSWLGKLGDKMGNH 266
Cdd:cd17473   188 AATAAALPWKRVLPIYFLA--FLAMLLFYVIPIqLPFLLQERGGGSAA--LIGLALAIASLAGAIGALLFGRLKRRLGKR 263
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 267 RLLLLALLYSFVIYIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITPQEGISRIFSYNQTFFYIGGVIGPLMGS 346
Cdd:cd17473   264 RLLAIGFALMALGFLLLALASGLWVVLLGAILAGLGFGLLLPTLNSWAMSLVPPELRGRAMGIVTSAFFLGQFLSPLVLG 343
                         330
                  ....*....|....*..
gi 1317668737 347 AISVHFGYHWVFYSTAG 363
Cdd:cd17473   344 PLVNLTGGLSGAFLILG 360
MFS_TetA cd17388
Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily ...
8-356 5.76e-16

Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of tetracycline resistance proteins similar to Escherichia coli TetA(A), TetA(B), and TetA(E), which are metal-tetracycline/H(+) antiporters that confer resistance to tetracycline by an active tetracycline efflux, which is an energy-dependent process that decreases the accumulation of the antibiotic in cells. TetA-like tetracycline resistance proteins belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340946 [Multi-domain]  Cd Length: 385  Bit Score: 78.83  E-value: 5.76e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   8 ASLSLVVPFMSLYVEELGARGSMVEFYSGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVF 87
Cdd:cd17388    13 MGIGLIMPVLPTLLREFVGDSADAATHYGVLLALYALMQFIFAPILGALSDRFGRRPVLLLSLAGAALDYLLMAFAPTLW 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  88 WLIVLRLLNGVFSGYVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQsLGMRNVFLLVGFFLFVVTLW 167
Cdd:cd17388    93 WLYLGRIIAGITGATGAVAAAYIADVTPPEQRARNFGLLGAAFGLGFIAGPALGGLLGE-ISPRAPFLVAAGLNGLNFLL 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 168 TIFGIKEDFHPVSKG----KEVSTKQLFQRIPQKSILFGLFITSMVIQMIGQSISPILTLYIrslgqkENLLLVSGAIV- 242
Cdd:cd17388   172 GLFVLPESLPPERRRafrwRRANPFGSLRWLTGFPGLLGLLAVFFLIQLIGQVPATTWVLFT------EDRFDWSPTMVg 245
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 243 ---SAMGISSIFSSSWL-GKLGDKMGNHRLLLLALLYSFVIYIFCARAGTPLELGIYRFLFGLGtGALLPGVSSLLNKIT 318
Cdd:cd17388   246 lslAVFGLLHALFQAFVtGPIAKRLGEKRAILLGLAADALGFLLLAFATQGWMVFPILILLALG-GIAGPALQGLLSRQV 324
                         330       340       350
                  ....*....|....*....|....*....|....*...
gi 1317668737 319 PQEGISRIFSYNQTFFYIGGVIGPLMGSAISVHFGYHW 356
Cdd:cd17388   325 PENEQGELQGVLTSLTSLTSIIGPLLFTGIFAASPATW 362
MFS_Set cd17471
Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters; ...
3-359 8.10e-16

Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters; This family is composed of sugar transporters such as Escherichia coli Sugar efflux transporter SetA, SetB, SetC and other sugar transporters. SetA, SetB, and SetC are involved in the efflux of sugars such as lactose, glucose, IPTG, and substituted glucosides or galactosides. They may be involved in the detoxification of non-metabolizable sugar analogs. The Set family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341024 [Multi-domain]  Cd Length: 371  Bit Score: 77.97  E-value: 8.10e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   3 NFFIGASLSLVVPFMSLY-VEELGARgsmvEFYSGLAVSSTALTAALLSPVWGSLADR-YGRKPMMIRAAFAMTFTMGGL 80
Cdd:cd17471     5 TLLTGLAGAFVLPYLSLFlTEELGAS----PLQIGIFMTLSALSGIVVSQWLGRLSDRgGDRKPLILLALLAGALGYLLF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  81 AFVPNVFW-LIVLRLLNGVFSGYVPNSTALI---ASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLL 156
Cdd:cd17471    81 AFLRNYWVlLLVGVVLLSLGAAAFPQLFALAreyADRSSGRDATLFNSVLRAAFSLAWVIGPPLAFLLLDVLGFTGLFLL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 157 VGFFLFVVTLWTIFGIKEDFHPVSKGKEVSTKQLFQRIPQKSILFGLFIT-SMVIQMIGQSISpiltLYIrslgqKENLL 235
Cdd:cd17471   161 AALLYLVVALLVLFLLPSVKPPAQKATPASSLVKAPVNRRLLLLFAAFTLlFAANSMYIIAMP----LYV-----TNELG 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 236 LVSGAIVSAMGISS---IFSSSWLGKLGDKMGNHRLLLLALLYSFVIYIFCARAGTPLELGIYRFLFGLGTGALLP-GVS 311
Cdd:cd17471   232 GSESWVGLLFGLAAaleIPIMLLAGLLAKRFGKRRLLLAGFLAGVLFYLGLALATSLWQLIALQLLNAIFIGITAGlGIS 311
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*....
gi 1317668737 312 SLLNKITPQEGI-SRIFSYNQTffyIGGVIGPLMGSAISVHFGYHWVFY 359
Cdd:cd17471   312 YFQDLMPGQPGLaTTLYSNASR---IGSLLGGLLAGVIAQYFGYRAVFL 357
BtlA COG2270
MFS-type transporter involved in bile tolerance, Atg22 family [General function prediction ...
16-353 2.21e-15

MFS-type transporter involved in bile tolerance, Atg22 family [General function prediction only];


Pssm-ID: 441871 [Multi-domain]  Cd Length: 424  Bit Score: 77.12  E-value: 2.21e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  16 FMSLYVEELGARGSMVE--FYSGLAVSSTALTAALLSPVWGSLADRYG-RKPMMIRAAFAMTFTMGGLAFVPNVFWLIVL 92
Cdd:COG2270    33 VFPPYFTSVAALGDPAAatALWGYALAIAGLLVALLAPVLGAIADRSGrKKPFLAFFTLLGVLATAALFFVAPGGLWLGL 112
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  93 RLL---NGVFSGYVPNSTALIASQAPKKH------SGYALG----TLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGF 159
Cdd:COG2270   113 LLFvlaNIGFEGSLVFYNAFLPDIATPEEigrvsgLGWALGylggVLLLLINLALFLKPEAFGLPDAGEAVRISFLLTAL 192
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 160 FLFVVTLWTIFGIKEDFHPVSKGKEVST-------KQLFQRIPQKSILFGLFITSMVIQMIGQSISPILTLYIRS-LGQK 231
Cdd:COG2270   193 WWLLFALPLFLFLPERPRPGPAPPRGAVragfrelRRTLRELRRYRDLLRFLLAYFFYRDGVQTVIAFAGIYAAGvLGFS 272
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 232 ENLLLVSGAIVSamgISSIFSSSWLGKLGDKMGNHRLLLLallySFVIYIFCA----RAGTPLELGIYRFLFGLGTGALL 307
Cdd:COG2270   273 TTELIVFGLLVQ---IVAALGALLFGRLDDRIGPKRVILV----SLVIWIVVClaayFLTTALAFWILGLLIGLVMGGIQ 345
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*.
gi 1317668737 308 PGVSSLLNKITPQEGISRIFSYNQTFFYIGGVIGPLMGSAISVHFG 353
Cdd:COG2270   346 ALSRSLLARLIPPGREAEFFGLYALSGKAASFLGPLLFGLVTQLTG 391
MFS_MMR_MDR_like cd17504
Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) ...
11-348 2.22e-15

Methylenomycin A resistance protein (also called MMR peptide)-like multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of putative multidrug resistance (MDR) transporters including Chlamydia trachomatis antiseptic resistance protein QacA_2, and Serratia sp. DD3 Bmr3. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341047 [Multi-domain]  Cd Length: 371  Bit Score: 76.85  E-value: 2.22e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  11 SLVVPFMSLYVEELGARGSMVefysGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLI 90
Cdd:cd17504    13 TMLSPALPTIQREFGTSAAAV----SWVLTAYLLVGAVSTPILGRLGDLYGRKKVLLIVLAIYTAGSLLAAFAPNLPVLI 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  91 VLRLLNGVFSGYVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGFFLFVVTLWTIF 170
Cdd:cd17504    89 AGRALQGIGGAVFPLAFALVREEFPPERVPVAQGILSATFGIGAGIGLPLGGWIVQHLGWRWIFWTAAPVAVLLAALVPL 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 171 gikedfhpvskgkeVSTKQLFQRIPQKSIL------FGLFITSMVIQMIGQSISPILTLyirslgqkeNLLLVSGAIVSA 244
Cdd:cd17504   169 --------------IDLRLLRRRNVLLANItallagFGMFMVFQLLPQLLQLPTPTGFG---------LGITEAGLLLLP 225
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 245 MGISSIFSSSWLGKLGDKMGNHRLLLLALLYSFVIYIFCA-RAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITPQEGI 323
Cdd:cd17504   226 GALVMLIAGPLAGRLIARVGPRRVLLIGLVISAVGLLLLAlLHSSLWALVVALLLIGIGLGLAFASLPNIVVESVPPDRT 305
                         330       340
                  ....*....|....*....|....*
gi 1317668737 324 SRIFSYNQTFFYIGGVIGPLMGSAI 348
Cdd:cd17504   306 GIATGMNTVLRTIGSAIGPAIAGAI 330
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
199-363 3.94e-15

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 76.08  E-value: 3.94e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 199 ILFGLFITSMVIQMIgqsiSPILTLYIRSLGQKEnllLVSGAIVSAMGISSIFSSSWLGKLGDKMGNHRLLLLALLYSFV 278
Cdd:cd17325     1 LSLALFLDMLGYGII----IPILPLYAESLGASV---AQIGLIVAAYALAQLLFSPPAGRLSDRFGRKRLLLLGLLLLAV 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 279 IYIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITPQEGISRIFSYNQTFFYIGGVIGPLMGSAISVHFGYHWVF 358
Cdd:cd17325    74 STLLFAFATSYWQLLLARFLQGLASAAVWPAAMALIADIAPPEERGRAMGIFSSAIGLGFLIGPLLGGLLADALGYRAPF 153

                  ....*
gi 1317668737 359 YSTAG 363
Cdd:cd17325   154 LVCAA 158
2_A_01_02 TIGR00880
Multidrug resistance protein;
36-174 2.98e-14

Multidrug resistance protein;


Pssm-ID: 273318 [Multi-domain]  Cd Length: 141  Bit Score: 69.22  E-value: 2.98e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  36 GLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLRLLNGVFSGYV-PNSTALIASQA 114
Cdd:TIGR00880   1 GLLLAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFAlVAGAALIADIY 80
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 115 PKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGFFLFVVTLWTIFGIKE 174
Cdd:TIGR00880  81 PPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
196-363 1.56e-13

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 71.16  E-value: 1.56e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 196 QKSILFGLFITSMVIQMIGQSISPILTLYIRSLGQKENLLlvsGAIVSAMGISSIFSSSWLGKLGDKMGNHRLLLLALLY 275
Cdd:COG2814     8 RWLALLALALGAFLSGLGIGIVLPALPLIAADLGASPAQA---GLVVTAYLLGAALGAPLAGRLADRFGRRRVLLLGLLL 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 276 SFVIYIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITPQEGISRIFSYNQTFFYIGGVIGPLMGSAISVHFGYH 355
Cdd:COG2814    85 FALGSLLCALAPSLWLLLAARFLQGLGAGALFPAALALIADLVPPERRGRALGLLGAGLGLGPALGPLLGGLLADLFGWR 164

                  ....*...
gi 1317668737 356 WVFYSTAG 363
Cdd:COG2814   165 WVFLVNAV 172
MFS_YcaD_like cd17477
YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of ...
2-363 2.96e-13

YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341030 [Multi-domain]  Cd Length: 360  Bit Score: 70.28  E-value: 2.96e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   2 GNFFIGASLSLVVPFMSLYVEELGARGSMVefysGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLA 81
Cdd:cd17477     4 SVALLGLGSGLLLPLLSLRLEREGVSTALI----GLVASAYYLGILLGSPLVPRLIRRVGHIRAFAAGAAITAVSVLLLA 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  82 FVPNVFWLIVLRLLNGV-FSGYVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSlgmRNVFLLVGFF 160
Cdd:cd17477    80 LTDSPWVWFLLRFVMGIgLAGLFVVSESWLNALATNENRGRVLGLYSTVLGLGFALGPLLLALVGTA---GALPFLIAAV 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 161 LFVVTLWTIFGIKEDFHPVSKGKEVSTKQLFQRIPqkSILFGLFITSMVIqmigQSISPILTLYIRSLGQKENlllVSGA 240
Cdd:cd17477   157 LLLLALVPLLLTRRAAPEIEEAESISLRRLLRIAP--LALLGAFVAGFLE----GAFYSLLPLYGLRLGLSVA---QAAL 227
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 241 IVSAMGISSIFSSSWLGKLGDKMGNHRLLLLALLYSFVIYIFCARA-GTPLELGIYRFLFGLGTGALLPGVSSLLNKITP 319
Cdd:cd17477   228 LLAAFVLGGLLLQWPLGWLADRFDRRRVLLGCALLGALAALLLPLVpGLPLALLVLLFLWGGAAGPLYTLALALAGDRLP 307
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....
gi 1317668737 320 QEGISRIFSYNQTFFYIGGVIGPLMGSAISVHFGYHWVFYSTAG 363
Cdd:cd17477   308 GDELVAANAALLLLYGLGSVIGPLLAGALMDAFGPHGLFLFLAA 351
MFS_FsR cd17478
Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; ...
11-362 1.55e-12

Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341031 [Multi-domain]  Cd Length: 365  Bit Score: 67.97  E-value: 1.55e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  11 SLVVPFMSLYVEELGARGSMVefysGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLI 90
Cdd:cd17478    13 GFLPALLPLLIAKLGLSYAQA----GLLVSVFSITSSLLQPLFGYLADRKPRRYLLPLGPLLTGLGLSLLGFAPNYWLLL 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  91 VLRLLNGVFSGYVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRnVFLLVGFFLFVVTLWTIF 170
Cdd:cd17478    89 LLVALAGIGSAAFHPEGARLASQAAGGRRGLAMSIFSVGGNLGFALGPLIAAALVALFGGL-GLLILLIIPGLAVALLLL 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 171 GIKEDFHPVSKGKEVSTKQLFQRIPQKSILFGLFITSMVIQMIGQSISPILTLYIRSLGQKenlLLVSGAIVSAMGISSI 250
Cdd:cd17478   168 RLRPLKKPEAKKAAAKSSARSTLKGVWRALLLLLIIVFLRSWVLSSLTTFLPFYLVQRGYS---LVFAGLLLSLFLFAGA 244
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 251 FSSSWLGKLGDKMGNHRLLLLALLYSFVIYIFCARAGTPLELGIYrFLFGLGTGALLPGVSSLLNKITPqEGISRIFSYN 330
Cdd:cd17478   245 IGTLIGGPLSDRFGRRRVIIASLLLAAPFLLLFLLTPGIWSYILL-VLAGFLLFASFPVTVVLAQELLP-GNVGLASGLM 322
                         330       340       350
                  ....*....|....*....|....*....|...
gi 1317668737 331 QTF-FYIGGVIGPLMGsAISVHFGYHWVFYSTA 362
Cdd:cd17478   323 MGLsFGLGGIGAPVLG-ALADAFGLESVLLILA 354
CynX COG2807
Cyanate permease [Inorganic ion transport and metabolism];
7-382 2.90e-12

Cyanate permease [Inorganic ion transport and metabolism];


Pssm-ID: 442057 [Multi-domain]  Cd Length: 399  Bit Score: 67.59  E-value: 2.90e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   7 GASLSLVVPFMSLYVEELGARGSMVefysGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNV 86
Cdd:COG2807    31 RPAITSVGPLLPEIRADLGLSATQA----GLLTTLPLLAFGLFAPLAPRLARRFGLERTLLLALLLLAAGLLLRSLAPSV 106
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  87 FWLIVLRLLNGVFSGYV-PNSTALIASQAPkKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGFFLFVVT 165
Cdd:COG2807   107 ALLLAGTALIGAGIAVGnVLLPGLIKRWFP-DRVGLMTGLYTAAMGLGAALAAGLTVPLAAALGWRGALAVWALLALLAL 185
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 166 L-WTIFGIKEDFHPVSKGKEVSTKQLFQRIPQKSILFGLFITSMVIQMIGQSISPILTLYIRSLGQkenlllvSGAIVSA 244
Cdd:COG2807   186 LlWLPLLRRRPAAAAAAPAAASLRSLWRSPLAWLLTLFFGLQSLLYYAVVAWLPPILRDAGLSAAT-------AGLLLSL 258
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 245 MGISSIFSSSWLGKLGDKMGNHRLLLLALLYSFVIYIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITP-QEGI 323
Cdd:COG2807   259 FQLAGIPGSLLVPLLADRLGDRRPLLLLLGLLGLAGLLGLLLAPGSLPWLWAVLLGLGQGGLFPLALTLIGLRARtPAEA 338
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 324 SRIFSYNQTFFYIGGVIGPLMGSAISVHFG-YHWVFYSTAGLALLNFFFLLFSFRKYLGA 382
Cdd:COG2807   339 AALSGMAQSVGYLLAALGPLLVGALHDATGsWTAALLLLAALAVLMLVAGLLAGRPYVED 398
MFS_spinster_like cd17328
Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; ...
34-174 4.90e-12

Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters; The protein spinster family includes Drosophila protein spinster, its vertebrate homologs, and similar proteins. Humans contain three homologs called protein spinster homologs 1 (SPNS1), 2 (SPNS2), and 3 (SPNS3). Protein spinster and its homologs may be sphingolipid transporters that play central roles in endosomes and/or lysosomes storage. SPNS2 is also called sphingosine 1-phosphate (S1P) transporter and is required for migration of myocardial precursors. S1P is a secreted lipid mediator that plays critical roles in cardiovascular, immunological, and neural development and function. The spinster-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340886 [Multi-domain]  Cd Length: 405  Bit Score: 66.88  E-value: 4.90e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  34 YSGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLRLLNGV-FSGYVPNSTALIAS 112
Cdd:cd17328    35 LAGLLQTVFIISYMVLSPIFGYLGDRYNRKWILAVGILIWSAATLLSSFAPNFWQLLLFRALVGIgEASYSPIAPTIIAD 114
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1317668737 113 QAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQS-LGMRNVFLLVGFFLFVVTLWTIFGIKE 174
Cdd:cd17328   115 LFPKEKRTRALGVFYFAIPLGSGLGYVVGGLVAQAtGGWRWAFRVTGVLGVLLAILLLLFVRE 177
MFS_YfcJ_like cd17489
Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; ...
199-363 1.18e-11

Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341042 [Multi-domain]  Cd Length: 367  Bit Score: 65.31  E-value: 1.18e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 199 ILFGLFITSMVIQMIgqsiSPILTLYIRSLGQKENlllVSGAIVSAMGISSIFSSSWLGKLGDKMGNHRLLLLALLYSFV 278
Cdd:cd17489     1 ILLANFFFFLSFYLL----LPVLPLYAHDLGGSEA---VAGLVVGLFTLAALLARPFAGRLLDRFGRKRLLLIGLLIFAL 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 279 IYIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITPQEGISRIFSYNQTFFYIGGVIGPLMGSAISVHFGYHWVF 358
Cdd:cd17489    74 ATLLYLLATSVALLLVLRLIHGIGWGAFTTAAATLVADIIPPSRRGEGIGYYGLATTLAMALGPALGLFLYQHLGFAVLF 153

                  ....*
gi 1317668737 359 YSTAG 363
Cdd:cd17489   154 IVAAV 158
2A0115 TIGR00895
benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and ...
36-174 2.62e-11

benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273327 [Multi-domain]  Cd Length: 398  Bit Score: 64.69  E-value: 2.62e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  36 GLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLRLLNGV-FSGYVPNSTALIASQA 114
Cdd:TIGR00895  55 GFLFSAGLIGMAFGALFFGPLADRIGRRRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLgLGGLMPNLNALVSEYA 134
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 115 PKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGFFLFVVTLWTIFGIKE 174
Cdd:TIGR00895 135 PKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPE 194
MFS_YajR_like cd17472
Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux ...
10-359 7.11e-11

Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli inner membrane transport protein YajR and some uncharacterized multidrug-efflux transporters. YajR is a putative proton-driven major facilitator superfamily (MFS) transporter found in many gram-negative bacteria. Unlike most MFS transporters, YajR contains a C-terminal, cytosolic YAM domain, which may play an essential role for the proper functioning of the transporter. YajR-like transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341025 [Multi-domain]  Cd Length: 371  Bit Score: 63.00  E-value: 7.11e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  10 LSLVVPFMSLYVEELGargSMVEFYSGLAVSSTALTAALLSPVWGSLADRYGRKPMMIrAAFAMtFTMGGL--AFVPNVF 87
Cdd:cd17472    12 MFLVLPVLSVYAKSLP---GATPTLIGLALGIYGLTQAIFQIPFGLLSDRIGRKPVIL-FGLLL-FIAGSLlaAYATSIY 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  88 WLIVLRLLNGvfSGYVPNS-TALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGFFLFVVTL 166
Cdd:cd17472    87 GLILGRALQG--SGAISSVvMALLADLTREENRTKAMALIGASIGIAFAISMVLGPLLAAHLGVSGLFLITAILSLVSLL 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 167 WTIFGIKEDfhPVSKGKEVSTKQLFQRIPQKSILFGLFITSMVIQMIGQSISPILTLY-IRSLGQKENLLLVSGAIVSAM 245
Cdd:cd17472   165 ILLFFVPDP--PKIVQISEKEKKKLKKLLKNKRLLRLDFSIFILHFVLMAFFYILPLLlTQLGGGKGQLWKVYLPAILIG 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 246 GISSIFSSSWLGKLGDKMGNHRLLLLALLYSFVIYIFcaRAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITPQEGISR 325
Cdd:cd17472   243 FILMVPFVIYAEKKGKMKQVFVSSILLIAVGFLLLLF--AATSLWLLIIGLIIFFIGFNLLEALLPSLVSKIAPKEYRGT 320
                         330       340       350
                  ....*....|....*....|....*....|....
gi 1317668737 326 IFSYNQTFFYIGGVIGPLMGSAISVHFGYHWVFY 359
Cdd:cd17472   321 AMGIYNTSQFLGSFLGGALGGLLWGLLGYSSVFL 354
MFS_YcxA_like cd17355
MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of ...
15-363 8.60e-11

MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters; This group is composed of uncharacterized bacterial MFS-type transporters including Bacillus subtilis YcxA and YbfB. YcxA has been shown to facilitate the export of surfactin in B. subtilis. The YcxA-like group belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340913 [Multi-domain]  Cd Length: 386  Bit Score: 63.06  E-value: 8.60e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  15 PFMSLYVEELGARGSMVefysGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLRL 94
Cdd:cd17355    24 VFIIPIIAEFGWSRAVI----SLAFTVGLLAFGLAQPFVGRLLDRFGPRRVMLLGLLLLAAGLVLLALATSLWQLYLLWG 99
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  95 LNGVF--SGYVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGFFLFVVTLWTIF-- 170
Cdd:cd17355   100 LLGGGgaGTLAAVAFATVAAWWFERRRGLALGILTAGGGLGSLVFLPLGAALIEAFGWRTALLVLALLALLVLVPVLLll 179
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 171 -------GIKEDFHPVSKGKEVSTKQLFQRIPQKSILFGLFITSMVIQMIGQSISPILTLyiRSLGQkenllLVSGAIVS 243
Cdd:cd17355   180 rrrpadlALRAYDDASPASPGSTLKEALRSASFWLLALAFFLCGFAVVGLIVHLVPYLAD--RGISP-----AAAAVALA 252
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 244 AMGISSIFSSSWLGKLGDKMGN-HRLLLLALLYSFVIYIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITPQEG 322
Cdd:cd17355   253 LIGLFNIVGRLLSGWLGDRYSPrRLLAASYALRALGLALLLLLPFPPLALLLFAALFGLGWGATVPLTAALAARYFGARS 332
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|..
gi 1317668737 323 ISRIFSYNQTFFYIGGVIGPLMGSAISVHFG-YHWVFYSTAG 363
Cdd:cd17355   333 YGTLFGLVFAPHQLGSALGPWLGGLLYDRTGsYTAAWALAVA 374
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
2-174 9.86e-11

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 62.58  E-value: 9.86e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   2 GNFFIGASLSLVVPFMSLYveeLGARGSMVEFYSGLAVSSTALTAALLSPVWGSLADRYGR--KPMMIRAAFAMTFTMGG 79
Cdd:COG2271   188 AYFLVYFALYGFLTWLPTY---LVEVRGLSLAQAGLLLSLPFLAGIVGSLLGGWLSDRLGRrrKLVLAIGLLLAALALLL 264
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  80 LAFVPNVFWLIVLRLLNGVFS-GYVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVG 158
Cdd:COG2271   265 LALLPSPALAIALLFLAGFGLgGAFGLLWALAAELFPKKARGTASGLVNTFGFLGGALGPLLVGYLLDATGYQAAFLLLA 344
                         170
                  ....*....|....*.
gi 1317668737 159 FFLFVVTLWTIFGIKE 174
Cdd:COG2271   345 ALALLAALLALLLLRE 360
MFS_Azr1_MDR_like cd17502
Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance ...
1-156 1.04e-10

Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including various Saccharomyces cerevisiae proteins such as azole resistance protein 1 (Azr1p), vacuolar basic amino acid transporter 1 (Vba1p), vacuolar basic amino acid transporter 5 (Vba5p), and Sge1p (also known as Nor1p, 10-N-nonyl acridine orange resistance protein, and crystal violet resistance protein). MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341045 [Multi-domain]  Cd Length: 337  Bit Score: 62.20  E-value: 1.04e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   1 MGNFFIGASLSLVVPFMSLYVEELGARGSMvefysGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFamTFTMGGL 80
Cdd:cd17502     3 LALFLAALDQTIVATALPTIVAEFGGLSLV-----SWVGTAYLLTSTAFQPIYGKLSDLFGRKWVLLIAIV--IFELGSL 75
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1317668737  81 --AFVPNVFWLIVLRLLNGV-FSGYVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLL 156
Cdd:cd17502    76 lcGLAPNMTMLIVGRAIQGIgGGGLMSLAFIIIADLVPPRERGKYQGYIGAVFGIASVAGPLIGGAFTDHLSWRWCFYI 154
MFS_SV2_like cd17316
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ...
35-167 1.93e-10

Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340874 [Multi-domain]  Cd Length: 353  Bit Score: 61.85  E-value: 1.93e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  35 SGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLRLLNGVF-SGYVPNSTALIASQ 113
Cdd:cd17316    38 TGLLFAAGFLGRPIGALLFGYLGDRIGRKKALILTLLLFGLATLLIGLLPTPILLLVLRFLQGIGiGGEYPGASTYVAEF 117
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1317668737 114 APKKHSGYALGTL----STGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGFFLFVVTLW 167
Cdd:cd17316   118 APSKRRGFALGLLqsgwALGALLAALVASLLIPLLSGDWGWRILFLIGALPALLALLL 175
MFS_Tpo1_MDR_like cd17323
Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of ...
4-167 3.01e-10

Yeast Polyamine transporter 1 (Tpo1) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of fungal multidrug resistance (MDR) transporters including several proteins from Saccharomyces cerevisiae such as polyamine transporters 1-4 (Tpo1-4), quinidine resistance proteins 1-3 (Qdr1-3), dityrosine transporter 1 (Dtr1), fluconazole resistance protein 1 (Flr1), and protein HOL1. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, Flr1 confers resistance to the azole derivative fluconazole while Tpo1 confers resistance and adaptation to quinidine and ketoconazole. The polyamine transporters are involved in the detoxification of excess polyamines in the cytoplasm. Tpo1-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340881 [Multi-domain]  Cd Length: 376  Bit Score: 61.05  E-value: 3.01e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   4 FFIGASLSLVVPFMSLYVEELGARGSMVEfysgLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFV 83
Cdd:cd17323     9 FVVTFGSSIYSPALPQIAEDFHVSEEVAN----LGVSLFVLGFGLGPLIWAPLSELYGRRPVYLVSLFIFVIFQIGCALA 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  84 PNVFWLIVLRLLNGVF-SGYVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLV----G 158
Cdd:cd17323    85 PNIAMLIILRFLQGFFgSSPLAIGAGTIADLFTPEERGKAMGVYSLGPLLGPALGPIIGGFITQSLGWRWIFWFLaiisG 164

                  ....*....
gi 1317668737 159 FFLFVVTLW 167
Cdd:cd17323   165 FCLILIFLF 173
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
199-363 5.05e-10

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 60.27  E-value: 5.05e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 199 ILFGLFITSMVIQMIGQSISPILTLYIRSLG-QKENLLLVSGAIVSAMGISSIFSsswlGKLGDKMGNHRLLLLALLYSF 277
Cdd:COG2271    11 ILALLFLAYFLNYLDRSNLSVAAPPLQADLGlSAAQLGLLASAFFLGYALGQIPA----GLLADRFGRRRVLAIGLLLWG 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 278 VIYIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITPQEGISRIFSYNQTFFYIGGVIGPLMGSAISVHFGYHWV 357
Cdd:COG2271    87 LATLLFGFATSFWQLLLLRFLLGLGEAGFFPAALKLIAEWFPPKERGRALGIFNAGGPLGGALAPPLLGWLLAAFGWRAA 166

                  ....*.
gi 1317668737 358 FYSTAG 363
Cdd:COG2271   167 FLILGL 172
MFS_MFSD9 cd17390
Major facilitator superfamily domain-containing protein 9; Major facilitator superfamily ...
11-173 5.95e-10

Major facilitator superfamily domain-containing protein 9; Major facilitator superfamily domain-containing protein 9 (MFSD9) is expressed in the central nervous system (CNS) and in most peripheral tissues but at very low expression levels. The function of MFSD9 is unknown. MFSD9 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340948 [Multi-domain]  Cd Length: 350  Bit Score: 60.32  E-value: 5.95e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  11 SLVVPFMSLYVEELGARgsmvEFYSGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLI 90
Cdd:cd17390    13 SMILPLLSTHIRSLGAS----PTVIGLIGSVYGALQLFSSPLVGSWSDVVGRRPVLLICLLLTALGYVLLGFSTSLALLF 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  91 VLRLLNGVFSGYVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQ-SLGMRNVFLLVGF---------F 160
Cdd:cd17390    89 LSRIPLGIFKHTQSLCKAYLSDLVSEQERSRVLGRFNAASSLGFILGPVVGGHLAEtDGGFYYVALLCSAifilnaglvW 168
                         170
                  ....*....|...
gi 1317668737 161 LFVVTLWTIFGIK 173
Cdd:cd17390   169 FLLSKLWDLLLVR 181
MFS_MCT_like cd17314
Monocarboxylate transporter (MCT) family and similar transporters of the Major Facilitator ...
37-362 1.02e-09

Monocarboxylate transporter (MCT) family and similar transporters of the Major Facilitator Superfamily; The group is composed of the Monocarboxylate transporter (MCT) family in animals and similar transporters from fungi, plants, archaea, and bacteria. MCT is also called Solute carrier family 16 (SLC16 or SLC16A). It is composed of 14 members, MCT1-14. MCTs play an integral role in cellular metabolism via lactate transport and have been implicated in metabolic synergy in tumors. MCTs have been found to facilitate the transport across the plasma membrane not only of monocarboxylates (MCT1-4), but also thyroid hormones (MCT8/10), and aromatic acids (MCT10). Yeast MCT homologous (Mch) proteins are not involved in the uptake of monocarboxylates; their substrates are not known. The MCT-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340872 [Multi-domain]  Cd Length: 385  Bit Score: 59.73  E-value: 1.02e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  37 LAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPN-VFWLIVLRLLNGVFSGYVPNSTALIASQAP 115
Cdd:cd17314    42 TAASLSNLGMLLTQPILGFIADSFGPRPLMALAGIMVLAGYTYLSYVFNsFPLSYACFVFIGAGTGILYGSAVLVTTQYF 121
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 116 KKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGFFLFVVTLW-TIFGIKEDFH-----PVSKGKEVSTKQ 189
Cdd:cd17314   122 PDTKGLALGLPTTGYSLGLVLGSPLLRILWVFYGLALVYTILGILAAIVLSVvSLLGFKEPPDnqarlHVQKKKTQTMGE 201
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 190 LFqRIPQKSILFGLFITSMViqmIGQSISPILTLYIRSLGQKENLLLVSGaiVSAMGISSIFSSSWLGKLGDKMGNhRLL 269
Cdd:cd17314   202 IF-RDKVFWILFIAIFLVLI---GGFLFIANMASLVRSLQLDAPSFVTKL--MSIYGLFNAFGRLLWGIVADFFGG-RLS 274
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 270 LLALLYSFVIYIFCA----RAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITPQEGISRIFSYNQTFFYIGGVIGPLMG 345
Cdd:cd17314   275 TLSILLTILGLGLCAflflLKMTPVGLVLTGSLLGFSYGGLFTVYPATVSTVFGTESFATLYGILLFAPAIGSILGPMLG 354
                         330
                  ....*....|....*...
gi 1317668737 346 SAI-SVHFGYHWVFYSTA 362
Cdd:cd17314   355 AKFyDRTPSYISAVYIYA 372
MFS_MdfA_MDR_like cd17320
Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major ...
8-174 2.04e-09

Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340878 [Multi-domain]  Cd Length: 379  Bit Score: 58.74  E-value: 2.04e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   8 ASLSLVVPFMSLYVEELGARGSMVEfysgLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVF 87
Cdd:cd17320    13 LAIDMYLPALPAIARDLGASASAVQ----LTLSAYLLGFALGQLLYGPLSDRFGRRPVLLAGLLLFILASLLCALASSIE 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  88 WLIVLRLLNGVF--SGYVPnSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGFFLFVVT 165
Cdd:cd17320    89 QLLIARFLQGLGaaAGSVV-ARAIVRDLYSGAELAKIFSLLMMILAIAPALAPLLGGLLLLFFGWRAIFVFLALLGLLLL 167

                  ....*....
gi 1317668737 166 LWTIFGIKE 174
Cdd:cd17320   168 LLVLLFLPE 176
FucP COG0738
Fucose permease [Carbohydrate transport and metabolism];
4-359 2.76e-09

Fucose permease [Carbohydrate transport and metabolism];


Pssm-ID: 440501 [Multi-domain]  Cd Length: 391  Bit Score: 58.33  E-value: 2.76e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   4 FFIGASLSLVVPFMSLYVEELGargsMVEFYSGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFV 83
Cdd:COG0738    18 FLWGFATALWGPLIPALKDAFG----LSDAQAGLLLFAFFLGYLLASLPAGRLIDRFGYKRGLLLGLLLMALGLLLFALA 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  84 PNVFWLIVLRLLNGVFSGYVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQ---SLGMRNVFLLVGFF 160
Cdd:COG0738    94 PSYPLLLLALFLLGLGLGLLDVAANPYVAALGPETAASRLNLLHAFFSLGALLGPLLGGLLILlglSLSWHLPYLILAVL 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 161 LFVVTLWTIFGIKEDFHPVSKGKEVSTKQLFQRIPQKSILFGLFI--TSMVIQMIGQSISPILTLYIRSLGQKENLLLVS 238
Cdd:COG0738   174 LLLLALLFLRSKLPEIEEEEEEAAGSAASLKSLLKNPRLLLGGLAifLYVGAEGAIGDWLPLYLKDVLGLSEATAALGLS 253
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 239 GAIVsAMGISSIFSsswlGKLGDKMGNHRLLLLALLYSFVIYIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKIT 318
Cdd:COG0738   254 LFWG-GMTIGRFLG----GFLLKRFGPVRLLRLSALLAAVGLLLALLAPGPWLALIGLALVGLGLSLMFPTIFSLALDGL 328
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 1317668737 319 PQEGISRIfSYNQTFFYIGGVIGPLMGSAISVHFGYHWVFY 359
Cdd:COG0738   329 GKRTAAAV-SAVLIMGIVGGAIGPPLIGFLADAFGLRAAFL 368
MFS_MT3072_like cd17475
Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar ...
36-363 2.85e-09

Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072 and similar transporters of the Major Facilitator Superfamily; This family includes the Mycobacterium tuberculosis uncharacterized MFS-type transporter MT3072. It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341028 [Multi-domain]  Cd Length: 378  Bit Score: 58.02  E-value: 2.85e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  36 GLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLRLLNGVFSGYV-PNSTALIASQA 114
Cdd:cd17475    34 GLLLSALNLGVAVSMLPAGWLLDRFGERRVLAVGLLLMGAAALLMALVGSYPVLLVLLFLVGAGYGSVqPGGGRAIMRWF 113
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 115 PKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGFFLFVVTLWTIFGIKEDFHPVSKGKEVSTKQLFQRI 194
Cdd:cd17475   114 PPRERGLAMGIRQTGVPLGGALAAALLPPLALHYGWRAAFVVAGLVSILAAVLFWLFYREPPAASAATESASTLLRSLKE 193
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 195 PQKSILFGLFITSMVIQMIGQ-SISPILTLYIRSlgQKENLLLVSGAIVSAMGISSIFSSSWLGKLGDKM--GNHRLLLL 271
Cdd:cd17475   194 VLRNRDVWLIAIAGALLVAPQfALLTFLLLFLHD--HLGLSVVAAGALLAVAQLGGALGRIGLGRVSDRVfgGRRRPVLV 271
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 272 ALLY----SFVIYIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITPQEGISRIFSYNQTFFYIGGVIGPLM-GS 346
Cdd:cd17475   272 ITAAiaaaALLVLSLLSPGTPLWLLVLLLILLGLFAIGWNGLYLTLVAESAGPEQAGTALGLANTINFIGIAIGPPLfGL 351
                         330
                  ....*....|....*..
gi 1317668737 347 AISVHFGYHWVFYSTAG 363
Cdd:cd17475   352 LVDATHSYAPAWLALAL 368
MFS_TRI12_like cd06179
Fungal trichothecene efflux pump (TRI12) of the Major Facilitator Superfamily of transporters; ...
1-192 3.11e-09

Fungal trichothecene efflux pump (TRI12) of the Major Facilitator Superfamily of transporters; This family includes Fusarium sporotrichioides trichothecene efflux pump (TRI12), which may play a role in F. sporotrichioides self-protection against trichothecenes. TRI12 belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340868 [Multi-domain]  Cd Length: 518  Bit Score: 58.41  E-value: 3.11e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   1 MGNFFIGASLSLVVPFMslyVEELGARGSmvefySGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAF--AMTFTMG 78
Cdd:cd06179     8 FAQLFGVTLPAAVLPFI---VADLGPSSN-----STWISTAWSLAQAVLGPIVGRLSDLFGRRWFFIGGNLlgVVGSIVA 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  79 GLAfvPNVFWLIVLRLLNGVFSGYVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQ--SLGMRNVF-L 155
Cdd:cd06179    80 GTA--KSVNMLIGGQALIGIGAGTQGLGAAVASELVPNKYRGLVQGVVNLVASPGSALGPLIAGALVEanAAGWRWIFyI 157
                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 1317668737 156 LVGFFLFVVTLWTIFgikedFHPVSKGKEVSTKQLFQ 192
Cdd:cd06179   158 NAIFNALALILLFFF-----YHPPPRPQLHGSSTRQK 189
MFS_PcaK_like cd17365
4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator ...
36-166 4.39e-09

4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator Superfamily; This aromatic acid:H(+) symporter subfamily includes Acinetobacter sp. 4-hydroxybenzoate transporter PcaK, Pseudomonas putida gallate transporter (GalT), Corynebacterium glutamicum gentisate transporter (GenK), Nocardioides sp. 1-hydroxy-2-naphthoate transporter (PhdT), Escherichia coli 3-(3-hydroxy-phenyl)propionate (3HPP) transporter (MhpT), and similar proteins. These transporters are involved in the uptake across the cytoplasmic membrane of specific aromatic compounds such as 4-hydroxybenzoate, gallate, gentisate (2,5-dihydroxybenzoate), 1-hydroxy-2-naphthoate, and 3HPP, respectively. The PcaK-like aromatic acid:H(+) symporter subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340923 [Multi-domain]  Cd Length: 351  Bit Score: 57.60  E-value: 4.39e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  36 GLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLRLLNGV-FSGYVPNSTALIASQA 114
Cdd:cd17365    37 GPVGSAALFGMAIGALLAGPLADRFGRKRVLLVSVALFGLFTLLTAFAQSVLQLALLRFLTGLgLGAAMPNAITLVSEYA 116
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1317668737 115 PKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGFFLFVVTL 166
Cdd:cd17365   117 PARRRSLAVTLMFCGYPLGAALGGFLAAALIPAFGWRSVFLLGGVPPLILLP 168
MFS_MJ1317_like cd17370
MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed ...
14-167 6.30e-09

MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed of Methanocaldococcus jannaschii MFS-type transporter MJ1317, Mycobacterium bovis protein Mb2288, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340928 [Multi-domain]  Cd Length: 371  Bit Score: 57.17  E-value: 6.30e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  14 VPFMSLYVEELGARGSMVefysGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLR 93
Cdd:cd17370   219 FAFLILRAQELGLSAALI----PLLYALFNLVYALAAYPAGRLSDRIGRKKLLILGYLSLALAYLGFALGSSLWLLLLGF 294
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1317668737  94 LLNGVFSGYV-PNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGFFLFVVTLW 167
Cdd:cd17370   295 ILWGLYMGAQeSIERAAVADLVPAELRGTAYGLFNTVVGIGWLLASLIAGYLWDLISPSAAFLFSAVLALIALLL 369
ProP COG0477
MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and ...
196-359 7.57e-09

MFS family permease, includes anhydromuropeptide permease AmpG [Carbohydrate transport and metabolism, Amino acid transport and metabolism, Inorganic ion transport and metabolism, General function prediction only];


Pssm-ID: 440245 [Multi-domain]  Cd Length: 295  Bit Score: 56.36  E-value: 7.57e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 196 QKSILFGLFITSMVIQMIGQSISPILTLYIRSLGQKENLLlvsGAIVSAMGISSIFSSSWLGKLGDKMGNHRLLLLALLY 275
Cdd:COG0477    12 RRRALLALALGTFLEGLDFTIVNVALPSIAADLGASSAQL---GWIVSAYLLGRAIGLLLFGRLGDRYGRKRVLLIGLLL 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 276 SFVIYIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITPQEGISRIFSYNQTFFYIGGVIGPLMGSAISVHFGYH 355
Cdd:COG0477    89 FGLASLLCGLAPSPELLIAARALQGIGAGGLMPGALALIAELFPARERGRALGLWGAAIGLGLALGPLLGGLLVAALGWR 168

                  ....
gi 1317668737 356 WVFY 359
Cdd:COG0477   169 WIFL 172
MFS_arabinose_efflux_permease_like cd17473
Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; ...
1-170 9.00e-09

Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily; This family includes a group of putative arabinose efflux permease family transporters, such as alpha proteobacterium quinolone resistance protein NorA (characterized Staphylococcus aureus Quinolone resistance protein NorA belongs to a different group), Desulfovibrio dechloracetivorans bacillibactin exporter, Vibrio aerogenes antiseptic resistance protein. The biological function of those transporters remain unclear. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341026 [Multi-domain]  Cd Length: 374  Bit Score: 56.81  E-value: 9.00e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   1 MGNFFIGASLSLVVPFMSLYVEELGARGSMVefySGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGL 80
Cdd:cd17473   204 FLAFLAMLLFYVIPIQLPFLLQERGGGSAAL---IGLALAIASLAGAIGALLFGRLKRRLGKRRLLAIGFALMALGFLLL 280
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  81 AFVPNVFWLIVLRLLNGVFSGYV-PNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGG-MVAQSLGMRNVFLLVG 158
Cdd:cd17473   281 ALASGLWVVLLGAILAGLGFGLLlPTLNSWAMSLVPPELRGRAMGIVTSAFFLGQFLSPLVLGpLVNLTGGLSGAFLILG 360
                         170
                  ....*....|..
gi 1317668737 159 FFLFVVTLWTIF 170
Cdd:cd17473   361 VLALVLAIVLLL 372
MFS_MFSD6 cd17335
Major facilitator superfamily domain-containing protein 6; Human Major facilitator superfamily ...
4-363 1.03e-08

Major facilitator superfamily domain-containing protein 6; Human Major facilitator superfamily domain-containing protein 6 (MFSD6) is also called macrophage MHC class I receptor 2 homolog (MMR2). It has been postulated as a possible receptor for human leukocyte antigen (HLA)-B62. MFSD6 is conserved through evolution and appeared before bilateral animals. It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340893 [Multi-domain]  Cd Length: 375  Bit Score: 56.44  E-value: 1.03e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   4 FFIGASLSLVVPFMSLYVEELGARGSMVefysGLAVSSTALTAALLSPVWGSLADRYG--RKPMMIRAAFAMTFTMGGLA 81
Cdd:cd17335     7 FFFFAALGSLLPFLSVYLKQLGLSPTQI----GILIGIRPFVRFLSAPLWGALADRFGkrKALLLLSLLAAVLFFLSLFF 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  82 FVPNVFWLIVLRLLNGVFSGYVPNSTALIASQAPKKHSG-YALGTLsTGVVAGTLMGPLLGGMVAQSLGMRNvfLLVGFF 160
Cdd:cd17335    83 VAQIFWLLLLLVILGAFFSAPVVPLVDSITLQYLGEERErYGKQRL-WGSIGFGIAALLVGILIDRSSTYKN--YTIAFY 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 161 LFVVTLWTIFGI--KEDFHPVSKGKEVSTKQLFQRIPQKSILFgLFITSMVIQMIGQSISPILTLYIRSLGQKENLLlvs 238
Cdd:cd17335   160 VFAVLMLLALLLalKFPFRPKHPEPNENTGGLLALLRNPRVLA-FLLVAFLMGFGHGLIYSFLFWHLQDLGGSKTLI--- 235
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 239 GAIVSAMGISSI----FSSSWLGKLGdkmgnHRLLLLALLYSFVI-YIFCARAGTPLELGIYRFLFGLGTGALLPGVSSL 313
Cdd:cd17335   236 GLLWTVGVVSEIpfffFSSRLIQRFG-----HVGLLYLGLLAYVVrWLLYSFLENPWLVLPIELLHGLTFALVWAAAVSY 310
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1317668737 314 LNKITPQE-GISRIFSYNQTFFYIGGVIGPLMGSAISVHFGYHWVFYSTAG 363
Cdd:cd17335   311 ASAAAPPGlRATAQGLLQGLYFGLGGGLGSLIGGYLYEAFGARTTFRFFAI 361
MFS_SLC18B1 cd17385
Solute carrier family 18 member B1 of the Major Facilitator Superfamily of transporters; ...
3-356 1.15e-08

Solute carrier family 18 member B1 of the Major Facilitator Superfamily of transporters; Solute carrier family 18 member B1 (SLC18B1) is the fourth member of the SLC18 transporter family, which includes vesicular monoamine transporters and vesicular acetylcholine transporter. It is predominantly expressed in the hippocampus and is associated with vesicles in astrocytes. It actively transports spermine and spermidine by exchange of H(+), and has been suggested to be a vesicular polyamine transporter (VPAT). SLC18B1 belongs to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340943 [Multi-domain]  Cd Length: 390  Bit Score: 56.46  E-value: 1.15e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   3 NFFIGASLSLVVPFMSLYVEELGARGSMVefysGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAM---TFTMGG 79
Cdd:cd17385     8 NFSSMICYSILAPFFPREAEKKGVSDTII----GLVFGCFALVIFLTSPIFGKYLVKIGAKFMFVAGMFVSggcTILFGF 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  80 LAFVPNVFWLIVL----RLLNGV-FSGYVPNSTALIASQAPKkHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVF 154
Cdd:cd17385    84 LDRVPDGTVFIALcflvRIVEAVgFAAFITASFAIIAKEFPN-NIATVLGTLETFSGLGLMLGPPLGGFLYQAGGYELPF 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 155 LLVGFFLFVVTLWTIFgIKEDFHPVSKGKEVSTKQLFqRIPqksilfGLFITSMVIQMIGQSIS---PILTLYIRSLGQK 231
Cdd:cd17385   163 LVLGCLLLLTVPLNMF-ILPRYDDDPSPKSGSMLKLL-KIP------SVLLLCLSIVSGSVSLGfldPTLSPHLRQFKLS 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 232 ENLLlvsGAIVSAMGISSIFSSSWLGKLGDKMGNHRLLLLALLYsFVIYIFCARAGTPL-----EL---GIYRFLFGLGT 303
Cdd:cd17385   235 PGQV---GLMFLILAGSYAISAPLWGWLSDKKKIPKWLMVIGSI-ITGVGFLLLGPAPLlpiksELwmvIIGLVLLGLSL 310
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1317668737 304 GA-LLPGVSSLLN---------KITPQEGISRIFSynqTFFYIGGVIGPLMGSAISVHFGYHW 356
Cdd:cd17385   311 GAaLVPTFPELLNcareygfpdNLSTYGLVSGLFN---AAFSLGAFIGPTLGGFLLERLGFEW 370
MFS_LmrB_MDR_like cd17503
Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) ...
38-264 1.58e-08

Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including Bacillus subtilis lincomycin resistance protein LmrB, and several proteins from Escherichia coli such as the putative MDR transporters EmrB, MdtD, and YieQ. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341046 [Multi-domain]  Cd Length: 380  Bit Score: 56.05  E-value: 1.58e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  38 AVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLRLLNGVFSGY-VPNSTALIASQAPK 116
Cdd:cd17503    36 VITSYLLALAIMIPLSGWLADRFGTRRLFLTALALFTLGSLLCGLAPNLASLIIFRILQGFGGGVlIPLAQTILLRIYPP 115
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 117 KHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLL-VGFFLFVVTLWTIFGIKedfhpvskgkevstkqLFqrip 195
Cdd:cd17503   116 EKRGAAMGLVGLVILLAPAIGPTLGGWLTDNLSWRWIFYInLPIGILALLLAPLLDLR----------------LF---- 175
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1317668737 196 qKSILFGLF-ITSMVIQMIGQSISPILTLYI-RSLGQKEnllLVSGAIVSAMGISSIFSSSWLGKLGDKMG 264
Cdd:cd17503   176 -KDRNFTLGlLLSFLLGLGLFGAMFLLPLYLqNVLGYSA---FESGLVLAPGGLASAILSPLVGRLLDKFG 242
MFS_1 pfam07690
Major Facilitator Superfamily;
203-363 1.60e-08

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 55.89  E-value: 1.60e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 203 LFITSMVIQMIGQSISPILTLYI-RSLGQKENLLlvsGAIVSAMGISSIFSSSWLGKLGDKMGNHRLLLLALLYSFVIYI 281
Cdd:pfam07690   1 LFLAAFLAALGRSLLGPALPLLLaEDLGISPTEI---GLLLTLFSLGYALAQPLAGRLSDRFGRRRVLLIGLLLFALGLL 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 282 FCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITPQEGISRIFSYNQTFFYIGGVIGPLMGSAISVHFGYHWVFYST 361
Cdd:pfam07690  78 LLLFASSLWLLLVLRVLQGLGAGALFPAALALIADWFPPEERGRALGLVSAGFGLGAALGPLLGGLLASLFGWRAAFLIL 157

                  ..
gi 1317668737 362 AG 363
Cdd:pfam07690 158 AI 159
MFS_YcaD_like cd17477
YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of ...
1-168 1.73e-08

YcaD and similar transporters of the Major Facilitator Superfamily; This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341030 [Multi-domain]  Cd Length: 360  Bit Score: 55.64  E-value: 1.73e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   1 MGNFFIGASLSLVVPFMSLYVEELGargsMVEFYSGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGL 80
Cdd:cd17477   195 LGAFVAGFLEGAFYSLLPLYGLRLG----LSVAQAALLLAAFVLGGLLLQWPLGWLADRFDRRRVLLGCALLGALAALLL 270
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  81 AFVPNVFW--LIVLRLLNGVFSGYVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVG 158
Cdd:cd17477   271 PLVPGLPLalLVLLFLWGGAAGPLYTLALALAGDRLPGDELVAANAALLLLYGLGSVIGPLLAGALMDAFGPHGLFLFLA 350
                         170
                  ....*....|
gi 1317668737 159 FFLFVVTLWT 168
Cdd:cd17477   351 AVALLFLLFL 360
MFS_ExuT_GudP_like cd17319
Hexuronate transporter, Glucarate transporter, and similar transporters of the Major ...
36-363 2.08e-08

Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily; This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340877 [Multi-domain]  Cd Length: 358  Bit Score: 55.27  E-value: 2.08e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  36 GLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLRLLNGVF-SGYVPNSTALIASQA 114
Cdd:cd17319    41 GLIASAFFLGYALFQVPGGWLLDRFGARKVLAVSMLLWSLFTALTGFATSLTSLYVLRFLLGVAeAGFFPGAIKALAEWF 120
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 115 PKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGFFLFVVTLWTIFGIKEdfhpvskgkevstkqlfqri 194
Cdd:cd17319   121 PARERGRATGLFNSGAPLGAAIGPPLSGWLLLLFGWRWAFIIEGLLGLLLAVLWWFYLRQ-------------------- 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 195 pqksiLFGLFITSMVIQMIGQSISPILTLYIRSLGQKEnlLLVSGAIVSAMGISSIFSSSWLGKLGDKMGNHR---LLLL 271
Cdd:cd17319   181 -----VWGLALGYFGINYALYGLLTWLPTYLKQARGFS--LKQVGLLAAIPFLAGAIGMILGGRLSDRLLRGArrlVIII 253
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 272 ALLYSFVIYIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITPQEGISRIFSYNQTFFYIGGVIGP-LMGSAISV 350
Cdd:cd17319   254 GLLLAAVGLLLAYLTTSPVVAVILLSLAGFGIGAASPVFWSLPADLLPGEAAATAGGLINSGGNLGGFVAPlLIGYLVDA 333
                         330
                  ....*....|...
gi 1317668737 351 HFGYHWVFYSTAG 363
Cdd:cd17319   334 TGSYTAAFLFLAA 346
2A0119 TIGR00898
cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]
50-167 3.90e-08

cation transport protein; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273328 [Multi-domain]  Cd Length: 505  Bit Score: 55.02  E-value: 3.90e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  50 SPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLRLLNGVFS-GYVPNSTALIASQAPKKHSGYAlGTLST 128
Cdd:TIGR00898 144 SFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIgGIWVQAVVLNTEFLPKKQRAIV-GTLIQ 222
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 1317668737 129 GVVA-GTLMGPLLGGMVaQSLGMRNVFLLVGFFLFVVTLW 167
Cdd:TIGR00898 223 VFFSlGLVLLPLVAYFI-PDWRWLQLAVSLPTFLFFLLSW 261
MFS_SLC22A18 cd17331
Solute carrier family 22 member 18 of the Major Facilitator Superfamily of transporters; ...
50-354 6.05e-08

Solute carrier family 22 member 18 of the Major Facilitator Superfamily of transporters; Solute carrier family 22 member 18 (SLC22A18) is also called Beckwith-Wiedemann syndrome chromosomal region 1 candidate gene A protein (BWR1A or BWSCR1A), efflux transporter-like protein, imprinted multi-membrane-spanning polyspecific transporter-related protein 1 (IMPT1), organic cation transporter-like protein 2 (ORCTL2), or tumor-suppressing subchromosomal transferable fragment candidate gene 5 protein (TSSC5). It is localized at the apical membrane surface of renal proximal tubules and may act as an organic cation/proton antiporter. It functions as a tumor suppressor in several cancer types including glioblastoma and colorectal cancer. SLC22A18 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340889 [Multi-domain]  Cd Length: 382  Bit Score: 54.15  E-value: 6.05e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  50 SPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLRlLNGVFSGYVPNSTALIASQAPKKHSGYALGTLSTG 129
Cdd:cd17331    52 GPLFGRFGDLFGPRAALVLSFLSSALSYLLLAFASSVPMLFLSR-LPSVFMHAMQAAQMVVTDLTDPGERAAALGRLGLS 130
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 130 VVAGTLMGPLLGGMVAQSLGMRNVFLL--VGFFLFVVTLWTIFGIKEDFHPVSKGKEVSTKQLFQRIPQKS--------- 198
Cdd:cd17331   131 YGIGMVVGSFLGGLLTKKFGEQAAALVaaVGSLLSIVLVILLIPSNTKSKREKEAKESASPPSVFNLKEILrllrlpgva 210
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 199 -ILFGLFITSMVIQMIGQSISPILTLYIRsLGQKENlllvsGAIVSAMGISSIFSS----SWLGKLGDKMGNHRLLLLAL 273
Cdd:cd17331   211 fLLLVKLLSGLPIGMFQSMFSLVAMDFFG-LTPEEN-----GYLMSYAGVLGMVVQgllvGPLTKRFGERSLLKLSVALL 284
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 274 LYSFVIYIFCaraGTPLELGIYRFLFGLGTGALLPGVSSLLNKITPQEGISRIFSYNQTFFYIGGVIGPLMGSAISVHFG 353
Cdd:cd17331   285 AIGYLLLAFV---TTVWQLLVLLLPLVIGGSVLYTVITSLLTKAVPPEDTGTALGLSHALFSLVRTVSPTIGGALLQAYG 361

                  .
gi 1317668737 354 Y 354
Cdd:cd17331   362 F 362
MFS_MJ1317_like cd17370
MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed ...
13-359 1.33e-07

MJ1317 and similar transporters of the Major Facilitator Superfamily; This family is composed of Methanocaldococcus jannaschii MFS-type transporter MJ1317, Mycobacterium bovis protein Mb2288, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340928 [Multi-domain]  Cd Length: 371  Bit Score: 52.93  E-value: 1.33e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  13 VVPFMSLYVEELGARGSMVEFYSGLAvsstALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTM-GGLAFVPNVFWLIV 91
Cdd:cd17370    18 ARSILPLFLVVLGASAAAVGLIEGLA----EALGSLLRLFSGYLSDRTGKRKPLVILGYGLSALAkPLLALAGSWQLVLL 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  92 LRLLNGVFSGY-VPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGG--MVAQSLGMRNVFLLVGF--FLFVVTL 166
Cdd:cd17370    94 LRILERLGKGIrTPPRDALLADATPPSGRGKAFGLHRALDTLGAVLGPLLAAllLYLLGGNYRTIFLLAAIpaLLALLIL 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 167 WTIFgikedfHPVSKGKEVSTKQLFQRIPQKSILFGLFITSMVIQMIGQSISPILTLYIRSLGQKenLLLVSGAIVSAMG 246
Cdd:cd17370   174 LFVV------KEYPRPPKLRKKSKKTSLKKLPKAFWLYLLAVALFALGNFSFAFLILRAQELGLS--AALIPLLYALFNL 245
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 247 ISSIFSSSwLGKLGDKMGNHRLLLLALLYSFVIYIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITPQEGISRI 326
Cdd:cd17370   246 VYALAAYP-AGRLSDRIGRKKLLILGYLSLALAYLGFALGSSLWLLLLGFILWGLYMGAQESIERAAVADLVPAELRGTA 324
                         330       340       350
                  ....*....|....*....|....*....|...
gi 1317668737 327 FSYNQTFFYIGGVIGPLMGSAISVHFGYHWVFY 359
Cdd:cd17370   325 YGLFNTVVGIGWLLASLIAGYLWDLISPSAAFL 357
MFS_MCT_SLC16 cd17352
Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily of transporters; ...
1-359 5.70e-07

Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily of transporters; The animal Monocarboxylate transporter (MCT) family is also called Solute carrier family 16 (SLC16 or SLC16A). It is composed of 14 members, MCT1-14. MCTs play an integral role in cellular metabolism via lactate transport and have been implicated in metabolic synergy in tumors. MCT1-4 are proton-coupled transporters that facilitate the transport across the plasma membrane of monocarboxylates such as lactate, pyruvate, branched-chain oxo acids derived from leucine, valine and isoleucine, and ketone bodies such as acetoacetate, beta-hydroxybutyrate and acetate. MCT8 and MCT10 are transporters which stimulate the cellular uptake of thyroid hormones such as thyroxine (T4), triiodothyronine (T3), reverse triiodothyronine (rT3) and diidothyronine (T2). MCT10 also functions as a sodium-independent transporter that mediates the uptake or efflux of aromatic acids. Many members are orphan transporters whose substrates are yet to be determined. The MCT family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340910 [Multi-domain]  Cd Length: 361  Bit Score: 51.01  E-value: 5.70e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   1 MGNFFIGASLSLVVPFMSLYVEELGARGSMVEFYSGLAVSSTALTaallSPVWGSLADRYGRKPMMIRAAFAMTFTMGGL 80
Cdd:cd17352    10 LVNFFTDGILNSFGVLFVELLEEFGESTSDIAWIGSLLLGVSLFS----GPLSSALVNRFGCRPVAIAGGLLAALGLLLS 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  81 AFVPNVFWLIV-LRLLNGVFSGYVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGF 159
Cdd:cd17352    86 SFATSLWQLYLtYGVLGGLGLGLIYSPAIVIVGQYFEKKRGLATGIAVAGSGVGTFVFPPLLRYLLDNYGWRGALLILGG 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 160 FLFVVTLWTIFGikedfhpvskgkevstkQLFqripqKSILFGLFITSMVIQMIGQSISPI-LTLYIRSLGQKENLllvS 238
Cdd:cd17352   166 LCLNLCVCGLLL-----------------RLL-----KDPTFVLLALGVSFAMLGFFVPFVyLPSYAKSLGIDESD---A 220
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 239 GAIVSAMGISSIFSSSWLGKLGDKMGNHRL--LLLALLYSFVIYIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNK 316
Cdd:cd17352   221 AFLLSIIGISDIVGRILLGLLADKPRIGRLylYIFTLLILGLSLLAFPLATTYVGLIVFSVLFGFCSGSYSSLTPVILAD 300
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....
gi 1317668737 317 ITPQEGISRIFSYNQTFFYIGGVIG-PLMGSAISVHFGYHWVFY 359
Cdd:cd17352   301 LVGLEKLSNAYGLVLLFQGLAALVGpPIAGLLRDYTGDYDAAFY 344
MFS_SLC46 cd17386
Solute carrier 46 (SLC46) family of the Major Facilitator Superfamily of transporters; The ...
47-170 5.86e-07

Solute carrier 46 (SLC46) family of the Major Facilitator Superfamily of transporters; The solute carrier 46 (SLC46) family is composed of three vertebrate members (SLC46A1, SLC46A2, and SLC46A3) and similar proteins from insects and nematodes. The best-studied member is SLC46A1, also called proton-coupled folate transporter (PCFT), which functions both as an intestinal proton-coupled high-affinity folate transporter involved in the absorption of folates and as an intestinal heme transporter which mediates heme uptake. SLC46A2, also called thymic stromal cotransporter protein (TSCOT), is a putative 12-transmembrane protein mainly expressed in the thymic cortex in a specific thymic epithelial cell (TEC) subpopulation. SLC46A3 is a lysosomal membrane protein that functions as a direct transporter of noncleavable antibody maytansine-based catabolites from the lysosome to the cytoplasm. The SLC46 family belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340944 [Multi-domain]  Cd Length: 360  Bit Score: 51.12  E-value: 5.86e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  47 ALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAF------VPNVFWLIVLRLLNGVFSGYVPNST---ALIASQAPKK 117
Cdd:cd17386    44 LFSSLFLGSWSDRYGRKPPLLMSLVGLLLSSLILVLivyfttVPSVWWFYLSAIPLALFGGFTAFLSasfAYISDISSEK 123
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1317668737 118 HSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGFFLFVVTLWTIF 170
Cdd:cd17386   124 KRTYRMAILEVALGLGGFLGSLLSGHLFKALGYAWSFSISAALLLIALLYILF 176
2A0104 TIGR00881
phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, ...
36-182 9.81e-07

phosphoglycerate transporter family protein; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273319 [Multi-domain]  Cd Length: 379  Bit Score: 50.45  E-value: 9.81e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  36 GLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLRLLNGVFSGY-VPNSTALIASQA 114
Cdd:TIGR00881  33 GLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMgWPPCGRTVTKWF 112
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1317668737 115 PKKHSGYALGTLSTG-VVAGTLMGPLLGGMVAQSLGMRNVFLLVGFFLFVVTLWTIFGIKEDfhPVSKG 182
Cdd:TIGR00881 113 SRSERGTWVSFWNCShNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDS--PQSCG 179
MFS_SVOP_like cd17372
Synaptic vesicle 2-related protein (SVOP) and related proteins of the Major Facilitator ...
50-151 1.26e-06

Synaptic vesicle 2-related protein (SVOP) and related proteins of the Major Facilitator Superfamily; This subfamily is composed of synaptic vesicle 2 (SV2)-related protein (SVOP), SVOP-like protein (SVOPL), and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. Like SV2, SVOP is expressed in all brain regions, with highest levels in cerebellum, hindbrain and pineal gland. Studies with knockout mice suggets that SVOP may perform a subtle function that is not necessary for survival under normal conditions, since mice lacking SVOP are viable, fertile, and phenotypically normal. SVOP and SVOPL share structural similarity to the solute carrier family 22 (SLC22), a large family of organic cation and anion transporters. The SVOP-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340930 [Multi-domain]  Cd Length: 367  Bit Score: 49.84  E-value: 1.26e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  50 SPVWGSLADRYGRKPMMIrAAFAMTFTMGGL-AFVPNVFWLIVLRLLNGVFSGYVPNSTALIASQAPKKHSGYALGTLST 128
Cdd:cd17372    51 SYLWGIVSDKYGRRKGLI-ISALWTFYAGFLsAFAPNYMWLIILRCLVGLGLGGGPQLASWYLEFLPAKSRGTWMVLFSV 129
                          90       100
                  ....*....|....*....|...
gi 1317668737 129 GVVAGTLMGPLLGGMVAQSLGMR 151
Cdd:cd17372   130 FWTVGTIFEASLAWLVMPRLGWR 152
MFS_SLC18A1_2_VAT1_2 cd17384
Vesicular amine transporters 1 (VAT1) and 2 (VAT2), and similar transporters of the Major ...
10-359 2.35e-06

Vesicular amine transporters 1 (VAT1) and 2 (VAT2), and similar transporters of the Major Facilitator Superfamily; Vesicular amine transporter 1 (VAT1 or VMAT1) is also called solute carrier family 18 member 1 (SLC18A1) or chromaffin granule amine transporter, while VAT2 (or VMAT2) is also called SLC18A2, synaptic vesicular amine transporter, or monoamine transporter. VATs (or VMATs) are responsible for the uptake of cytosolic monoamines into synaptic vesicles in monoaminergic neurons. VAT1 and VAT2 distinct pharmacological properties and tissue distributions. VAT1 is preferentially expressed in neuroendocrine cells and endocrine cells, where it transports biogenic monoamines, such as serotonin, from the cytoplasm into the secretory vesicles. VAT2 is primarily expressed in the CNS and is involved in the ATP-dependent vesicular transport of biogenic amine neurotransmitters including dopamine, norepinephrine, serotonin, and histamine into synaptic vesicles. VATs belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340942 [Multi-domain]  Cd Length: 373  Bit Score: 49.11  E-value: 2.35e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  10 LSLVVPFMSLYVEELGargsmvefYSGLAVSSTALTAALLSPVWGSLADRYG-RKPMMIRAAFAMTFTMGgLAFVPNVFW 88
Cdd:cd17384    16 LTVVVPIIPDYLNENV--------RVGLLFASKALVQLITNPIVGPLTNRIGySLPMFVGFVIMFISTLL-FAFGESYGV 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  89 LIVLRLLNGVFSGYVPNS-TALIASQAPK-KHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGFFLFVVTL 166
Cdd:cd17384    87 LFLARALQGVGSACSSVAgMGMLASLYPDdKERGKAMGIALGGLALGVLVGPPFGGVMYEFVGKSAPFLILAFLALLDGA 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 167 WTIFGIKEDFHPVSKGKEVSTKQLFQripQKSIL---FGLFITSMVIQMigqsISPILTLY-IRSLGQKENLLlvsGAIV 242
Cdd:cd17384   167 LQLFILQPSVKSEESEEGTPWKTLLK---DPYILiaaGAICFSNSGIAI----LEPCLPIWmMETMCPPKWQL---GTAF 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 243 SAMGISSIFSSSWLGKLGDKMGNHRLLLLALLYSFVIYIFCARAGTPLELGIYRFLFGLGTG----ALLPGVSSLL-NKI 317
Cdd:cd17384   237 LPDSIGYLIGTNLFGPLAHKIGRWLCSLLGMLLVGISLILIPLAKNIYGLIIPHFGLGLGIGmvdsSMMPLLAYLVdLRH 316
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|..
gi 1317668737 318 TPQEGisRIFSYNQTFFYIGGVIGPLMGSAISVHFGYHWVFY 359
Cdd:cd17384   317 SSVYG--SVYAIADVAFCLAFALGPSLGGAIVKSIGFPWLMR 356
efflux_Bcr_CflA TIGR00710
drug resistance transporter, Bcr/CflA subfamily; This subfamily of drug efflux proteins, a ...
53-174 3.13e-06

drug resistance transporter, Bcr/CflA subfamily; This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.


Pssm-ID: 273229 [Multi-domain]  Cd Length: 385  Bit Score: 48.92  E-value: 3.13e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  53 WGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLRLLNGVF-SGYVPNSTALIASQAPKKHSGYALGTLSTGVV 131
Cdd:TIGR00710  60 WGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGaSAGSVISQALVRDIYPGEELSRIYSILMPVLA 139
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 1317668737 132 AGTLMGPLLGGMVAQSLGMRNVFLLVGFFLFVVTLWTIFGIKE 174
Cdd:TIGR00710 140 LAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPE 182
MFS_OPA_SLC37 cd17312
Organophosphate:Pi antiporter/Solute Carrier family 37 of the Major Facilitator Superfamily of ...
36-359 3.95e-06

Organophosphate:Pi antiporter/Solute Carrier family 37 of the Major Facilitator Superfamily of transporters; Organophosphate:Pi antiporters (OPA) are integral membrane proteins responsible for the transport of specific organophosphates or sugar phosphates across biological membranes with the simultaneous translocation of inorganic phosphate into the opposite direction. The OPA family is also called solute carrier family 37 (SLC37) in vertebrates. Members include glucose-6-phosphate (Glc6P) transporter (also called translocase or exchanger), glycerol-3-phosphate permease, 2-phosphonopropionate transporter, phosphoglycerate transporter, as well as membrane sensor protein UhpC from Escherichia coli. UhpC is both a sensor and a transport protein; it recognizes external Glc6P and induces transport by UhpT, and it can also transport Glc6P. Vertebrates contain four SLC37 or sugar-phosphate exchange (SPX) proteins: SLC37A1 (SPX1), SLC37A2 (SPX2), SLC37A3 (SPX3), and SLC37AA4 (SPX4). The OPA/SLC37 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340870 [Multi-domain]  Cd Length: 364  Bit Score: 48.42  E-value: 3.95e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  36 GLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLRLLNGVFSGY-VPNSTALIASQA 114
Cdd:cd17312    41 GIIGSAFLIAYAVGKFISGFLSDRSNIRRFMSAGLLLSALANIFMGFSTSLWFFAVLWGLNGLFQSMgWPPCVKLLGNWF 120
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 115 PKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGFFLFVVTLWTIFGIKEDfhpvskgkevstkqlfqri 194
Cdd:cd17312   121 SKKERGTVYGIWSTSHNFGGILAPILAASLASYYGWRAAFLVPGIVGLVVAIILFFFLRDS------------------- 181
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 195 PQKSILFGLfiTSMVIQMIGQSISPILTLYIrsLGQKENLLLVSGAIVSAMGISSIFSSSWLGKLGDKMGNHRLLLLALL 274
Cdd:cd17312   182 PPYVWVLSL--AYAFVYIVRYACLDWGPLYL--YEVKGYSLIDAGWFSSLYEVGGIAGTILAGLLSDKLFGGRRAPIAVI 257
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 275 Y----SFVIYIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNK-ITPQEGISRIFSYNQTFFYIGGVIGPLMGSAIS 349
Cdd:cd17312   258 YmllmTLSLALFWFFPHNKLLSIVLLFLIGFFVGGPINLIGGAAAQdIGRKEAAGTATGFVGLFGYLGASLAGLPLGYII 337
                         330
                  ....*....|
gi 1317668737 350 VHFGYHWVFY 359
Cdd:cd17312   338 DHYGWSTVFY 347
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
1-175 5.61e-06

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 47.97  E-value: 5.61e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   1 MGNFFIGASLSLVVPFMSLYVEE-LGARGSMVefysGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGG 79
Cdd:COG2211   235 LAYLLFFLALALVAALLLYYFKYvLGLSAALV----GLLLALYFLAALLGAPLWPRLAKRFGKKKAFIIGLLLAALGLLL 310
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  80 LAFVP--NVFWLIVLRLLNGVFSG-YVPNSTALIASQAP-------KKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLG 149
Cdd:COG2211   311 LFFLGpgNLWLLLVLAALAGIGLGaILVLPWAMLADVVDydewktgRRREGLYFGIFTFAIKLGQALAGALAGLLLALFG 390
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1317668737 150 --------------MRNVFLLVGFFLFVVTLWTIFGIKED 175
Cdd:COG2211   391 yvagaaqspsaltgIRLLFFLLPAVLLLLAALLLLFYPLT 430
MFS_SLC17A9_like cd17380
Solute carrier family 17 member 9 and similar proteins of the Major Facilitator Superfamily of ...
35-170 6.24e-06

Solute carrier family 17 member 9 and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily includes solute carrier family 17 member 9 (SLC17A9) and similar proteins including plant inorganic phosphate transporters (PHT4) that are also probably anion transporters. SLC17A9, also called vesicular nucleotide transporter (VNUT), is involved in vesicular storage and exocytosis of ATP. It facilitates the accumulation of ATP and other nucleotides in secretory vesicles such as adrenal chromaffin granules and synaptic vesicles. It also functions as a lysosomal ATP transporter and regulates cell viability. Plant PHT4 family transporters mediate the transport of inorganic phosphate and may also transport organic anions. The Arabidopsis protein AtPHT4;4 is a chloroplast-localized ascorbate transporter. PHT4 proteins show differential expression that suggests specialized functions. The SLC17A9-like subfamily belongs to the Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340938 [Multi-domain]  Cd Length: 361  Bit Score: 47.93  E-value: 6.24e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  35 SGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFT--MGGLAFVPNVFWLIVLRLLNGVFSG-YVPNSTALIA 111
Cdd:cd17380    36 QGLVLSSFFWGYALTQVLGGYLADRFGGKKVLLLAVALWSLAtlLTPLLAYSSLPLLILSRILLGLGEGvHFPSMTSLFS 115
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 112 SQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGFFLFV-VTLWTIF 170
Cdd:cd17380   116 RWVPVSERSRAVSIVTAGSYLGTLLGGLIGPLLLEYYGWPSVFYFFGLLGLLwALVWLIY 175
MFS_MMR_MDR_like cd17321
Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance ...
256-359 6.53e-06

Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340879 [Multi-domain]  Cd Length: 370  Bit Score: 47.55  E-value: 6.53e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 256 LGKLGDKMGNHRLLLLALLYSFVIYIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITPQEGISRIFSYNQTFFY 335
Cdd:cd17321    51 AGRLGDRFGRKRVFLIGLALFGLASLLCALAPSLAFLIAARALQGIGAAAIMPASLALIAATFPGERRGRALGLWGAVVG 130
                          90       100
                  ....*....|....*....|....
gi 1317668737 336 IGGVIGPLMGSAISVHFGYHWVFY 359
Cdd:cd17321   131 IGAALGPLLGGLLLELFGWRWIFL 154
MFS_SLC22A6_OAT1_like cd17446
Solute carrier family 22 member 6 (also called Organic anion transporter 1) and similar ...
52-115 8.76e-06

Solute carrier family 22 member 6 (also called Organic anion transporter 1) and similar transporters of the Major Facilitator Superfamily; This subfamily includes solute carrier family 22 member 6 (SLC22A6, also called organic anion transporter 1 or OAT1 or para-aminohippurate (PAH) transporter), SLC22A8 (or OAT3), and SLC22A20 (or OAT6). OAT1 and OAT3 are involved in the renal elimination of endogenous and exogenous organic anions (OAs). They function as OA exchangers, coupling the uptake of OAs against an electrochemical gradient with the efflux of intracellular dicarboxylates. SLC22A20 is an OA transporter that mediates the uptake of estrone sulfate. The OAT1-like subfamily belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341004 [Multi-domain]  Cd Length: 339  Bit Score: 47.41  E-value: 8.76e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1317668737  52 VWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLRLLNGV-FSGYVPNSTALIASQAP 115
Cdd:cd17446    52 VFGGLSDRFGRRPLLIWSYLQMAVSGTCAAFSPSFPIYCVFRFLTGMaLSGIVLNSVSLNVEWMP 116
MFS_PcaK_like cd17365
4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator ...
239-359 8.80e-06

4-hydroxybenzoate transporter PcaK and similar transporters of the Major Facilitator Superfamily; This aromatic acid:H(+) symporter subfamily includes Acinetobacter sp. 4-hydroxybenzoate transporter PcaK, Pseudomonas putida gallate transporter (GalT), Corynebacterium glutamicum gentisate transporter (GenK), Nocardioides sp. 1-hydroxy-2-naphthoate transporter (PhdT), Escherichia coli 3-(3-hydroxy-phenyl)propionate (3HPP) transporter (MhpT), and similar proteins. These transporters are involved in the uptake across the cytoplasmic membrane of specific aromatic compounds such as 4-hydroxybenzoate, gallate, gentisate (2,5-dihydroxybenzoate), 1-hydroxy-2-naphthoate, and 3HPP, respectively. The PcaK-like aromatic acid:H(+) symporter subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340923 [Multi-domain]  Cd Length: 351  Bit Score: 47.19  E-value: 8.80e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 239 GAIVSAMGISSIFSSSWLGKLGDKMGNHRLLLLALLYSFVIYIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKIT 318
Cdd:cd17365    37 GPVGSAALFGMAIGALLAGPLADRFGRKRVLLVSVALFGLFTLLTAFAQSVLQLALLRFLTGLGLGAAMPNAITLVSEYA 116
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1317668737 319 PQEGISRIFSYNQTFFYIGGVIGPLMGSAISVHFGYHWVFY 359
Cdd:cd17365   117 PARRRSLAVTLMFCGYPLGAALGGFLAAALIPAFGWRSVFL 157
MFS_SLC17A9_like cd17380
Solute carrier family 17 member 9 and similar proteins of the Major Facilitator Superfamily of ...
282-363 9.72e-06

Solute carrier family 17 member 9 and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily includes solute carrier family 17 member 9 (SLC17A9) and similar proteins including plant inorganic phosphate transporters (PHT4) that are also probably anion transporters. SLC17A9, also called vesicular nucleotide transporter (VNUT), is involved in vesicular storage and exocytosis of ATP. It facilitates the accumulation of ATP and other nucleotides in secretory vesicles such as adrenal chromaffin granules and synaptic vesicles. It also functions as a lysosomal ATP transporter and regulates cell viability. Plant PHT4 family transporters mediate the transport of inorganic phosphate and may also transport organic anions. The Arabidopsis protein AtPHT4;4 is a chloroplast-localized ascorbate transporter. PHT4 proteins show differential expression that suggests specialized functions. The SLC17A9-like subfamily belongs to the Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340938 [Multi-domain]  Cd Length: 361  Bit Score: 47.16  E-value: 9.72e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 282 FCARAGTPLeLGIYRFLFGLGTGALLPGVSSLLNKITPQEGISRIFSYNQTFFYIGGVIGPLMGSAISVHFGYHWVFYST 361
Cdd:cd17380    83 LLAYSSLPL-LILSRILLGLGEGVHFPSMTSLFSRWVPVSERSRAVSIVTAGSYLGTLLGGLIGPLLLEYYGWPSVFYFF 161

                  ..
gi 1317668737 362 AG 363
Cdd:cd17380   162 GL 163
MFS_SVOP cd17441
Synaptic vesicle 2-related protein (SVOP) of the Major Facilitator Superfamily; Synaptic ...
50-166 1.07e-05

Synaptic vesicle 2-related protein (SVOP) of the Major Facilitator Superfamily; Synaptic vesicle 2 (SV2)-related protein (SVOP) is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. Like SV2, SVOP is expressed in all brain regions, with highest levels in cerebellum, hindbrain and pineal gland. Studies with knockout mice suggets that SVOP may perform a subtle function that is not necessary for survival under normal conditions, since mice lacking SVOP are viable, fertile, and phenotypically normal. SVOP shares structural similarity to the solute carrier family 22 (SLC22), a large family of organic cation and anion transporters. This SVOP subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340999 [Multi-domain]  Cd Length: 372  Bit Score: 47.11  E-value: 1.07e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  50 SPVWGSLADRYGRKPMMiRAAFAMTFTMGGL-AFVPNVFWLIVLRLLNGVFSGYVPNSTALIASQAPKKHSGYALGTLST 128
Cdd:cd17441    51 SSLWGNISDQYGRKTGL-KISVLWTLYYGILsAFAPIYSWILVLRGLVGFGIGGVPQSVTLYAEFLPMKSRAKCILLIEV 129
                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 1317668737 129 GVVAGTLMGPLLGGMVAQSLGMRNVFLLVGFFLFVVTL 166
Cdd:cd17441   130 FWALGTVFEVLLAVFVMPTLGWRWLLILSALPLLIFAV 167
MFS_MMR_MDR_like cd17321
Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance ...
2-148 1.10e-05

Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340879 [Multi-domain]  Cd Length: 370  Bit Score: 47.17  E-value: 1.10e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   2 GNFFIGASLSLVVPFMSLYveeLGARGSMVEFYSGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLA 81
Cdd:cd17321   176 AAFLLGAALGGLLFLLPLY---LQGVLGYSPLQAGLALLPLALAMLVAAPLAGRLADRFGPRLVLVAGLLLTAVGLLLLA 252
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1317668737  82 FVPNVFW---LIVLRLLNGVFSG-YVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSL 148
Cdd:cd17321   253 LLGADSSvwlLLPGLVLLGLGLGlFATPLTNAALSSVPKEKAGAASGILNTARQLGGALGVALLGALLTAG 323
MFS_Amf1_MDR_like cd17476
Saccharomyces cerevisiae low affinity ammonium transporter Amf1p/YOR378W, aminotriazole ...
38-179 1.34e-05

Saccharomyces cerevisiae low affinity ammonium transporter Amf1p/YOR378W, aminotriazole resistance protein Atr1p, and similar transporters of the Major Facilitator Superfamily; Saccharomyces cerevisiae Amf1p/Ammonium Facilitator 1/YOR378W functions as a low affinity NH4+ transporter. S. cerevisiae aminotriazole resistance protein (Atr1p) is required for controlling sensitivity to aminotriazole; it is a putative component of the machinery responsible for pumping aminotriazole (and possibly other toxic compounds) out of the cell. This subfamily also includes S. cerevisiae YMR279C, a putative boron transporter involved in boron efflux and resistance, and Kluyveromyces lactis Knq1p which is involved in oxidative stress response and iron homeostasis. Amf1p, Atr1p, and YMR279C have been classified as group 1 members of the DHA2 (Drug:H+ Antiporter family 2) family, K. lactis Knq1 as group 2. This subfamily also includes two Aspergillus terreus terrein biosynthesis cluster proteins, efflux pump TerG and TerJ which may be required for efficient secretion of terrein or other secondary metabolites produced by the terrein gene cluster. The Amf1p-like subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341029 [Multi-domain]  Cd Length: 362  Bit Score: 46.87  E-value: 1.34e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  38 AVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLRLLNGV-FSGYVPNSTALIA-SQAP 115
Cdd:cd17476    38 LAASYSLTVGTFILIFGRLGDIYGHKKMFVIGSFWFAIWSLIAGFSPNFIFFIICRALQGLgPAFLLPNAMALLGrTYPP 117
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1317668737 116 KKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGFFLFVVTLWTIFGIKEDFHPV 179
Cdd:cd17476   118 GPRKNIVFSLFGATAPLGFALGGVFGGLFAQLAWWPWIFWFLAILAAIVAVAAIFWTSPSFIAV 181
MFS_XylE_like cd17359
D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This ...
33-136 1.58e-05

D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily; This subfamily includes bacterial transporters such as D-xylose-proton symporter (XylE or XylT), arabinose-proton symporter (AraE), galactose-proton symporter (GalP), major myo-inositol transporter IolT, glucose transport protein, putative metabolite transport proteins YfiG, YncC, and YwtG, and similar proteins. The symporters XylE, AraE, and GalP facilitate the uptake of D-xylose, arabinose, and galactose, respectively, across the boundary membrane with the concomitant transport of protons into the cell. IolT is involved in polyol metabolism and myo-inositol degradation into acetyl-CoA. The XylE-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340917 [Multi-domain]  Cd Length: 383  Bit Score: 46.41  E-value: 1.58e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  33 FYSGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLRLLNGVFSGYVP-NSTALIA 111
Cdd:cd17359    36 FLEGLVVSSALLGAAIGALFAGRLADRFGRRKTLLISAVLFFISALGSAFSPNFTIFIIARIIGGLAVGGASaLVPMYIA 115
                          90       100
                  ....*....|....*....|....*
gi 1317668737 112 SQAPKKHSGYALGTLSTGVVAGTLM 136
Cdd:cd17359   116 EVAPAEIRGRLVSLNQLMIVFGQLL 140
MFS_GLUT_like cd17315
Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator ...
1-359 1.90e-05

Glucose transporters (GLUTs) and other similar sugar transporters of the Major Facilitator Superfamily; This family is composed of glucose transporters (GLUTs) and other sugar transporters including fungal hexose transporters (HXT), bacterial xylose transporter (XylE), plant sugar transport proteins (STP) and polyol transporters (PLT), H(+)-myo-inositol cotransporter (HMIT), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. The GLUT-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340873 [Multi-domain]  Cd Length: 365  Bit Score: 46.41  E-value: 1.90e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   1 MGNFFIGASLSLVVPFMSLYVEELGARGSmvEFYSGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGL 80
Cdd:cd17315     4 LGGLLFGYDLGVINGALLYIAKDLGFGLS--TSLQGLVVSSLLLGAAIGSLFGGPLADRFGRRKSLLIAAVLYVIGALLS 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  81 AFVPNVFWLIVLRLLNGVFSGYVPNSTAL-IASQAPKKHSGyALGTLST-GVVAGTLMGPLLGGMVAQSLGMRNVFLLVG 158
Cdd:cd17315    82 ALAPNVWVLIVGRFLLGLGVGLASVLVPLyISEIAPAKIRG-ALGTLNQlMITFGILLAYLLGLALSLSPPGWWRLMFAL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 159 FFLFVVTLWTIFGIKEDFHPVSKGkevSTKQLFQripqksilfglfitsmviQMIGqsISPIL---TLYIRSLGQKENLL 235
Cdd:cd17315   161 AAVPALLQLLLMFFLPESRALLVG---VGLQLLQ------------------QLTG--INAVMyyaPTIFKSAGGGTASI 217
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 236 LVSgAIVSAMGISSIFSSSWLGklgDKMGNHRLLLLALLYSFVIYIFCARAGTPLELG------------IYRFLFGLGT 303
Cdd:cd17315   218 LAS-IIVGVVNLLATLVAIRLV---DKVGRRPLLLIGFAGMAASLLLLAIAFLLPALAkaagwlallgilLYIAAFAMGA 293
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1317668737 304 GALlPGVssLLNKITPQEGISRIFSYNQTFFYIGGVIGPLMGSAISVHFGYHWVFY 359
Cdd:cd17315   294 GPV-PWL--LLSEIFPLRIRGKGMAIATLVNWIFNFIVGLTFLIMVSTIGLAGVFI 346
MFS_MFSD10 cd17389
Major facilitator superfamily domain-containing protein 10; Major facilitator superfamily ...
48-174 2.06e-05

Major facilitator superfamily domain-containing protein 10; Major facilitator superfamily domain-containing protein 10 (MFSD10) is also called tetracycline transporter-like protein (TETRAN). It is expressed in various human tissues, including the kidney. In cultured cells, its overexpression facilitated the uptake of organic anions such as some non-steroidal anti-inflammatory drugs (NSAIDs). MFSD10/TETRAN overexpression cause resistance to some NSAIDs, suggesting that it may be an organic anion transporter that serves as an efflux pump for some NSAIDs and various other organic anions at the final excretion step. MFSD10 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340947 [Multi-domain]  Cd Length: 391  Bit Score: 46.11  E-value: 2.06e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  48 LLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLRLLNGVFSGYVPNSTALIASQAPKKHSGYALGTLS 127
Cdd:cd17389    79 LSSPITGAASDVYGRKPVLLLTMIGLAISYALWAVSRSFTIFLLSRIVGGISKGNVSLSTAIVADVTSPKKRSKGMALIG 158
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1317668737 128 TGVVAGTLMGPLLGGMVAQSLGMRNVF------LLVGFFLFVVTLWTIFGIKE 174
Cdd:cd17389   159 VAFSLGFIIGPMIGAYFASFTRSLGEVffsmpaLFALVLALADLLFIFFFLPE 211
MFS_1_like pfam12832
MFS_1 like family; This family contains proteins related to the MFS superfamily.
4-256 2.27e-05

MFS_1 like family; This family contains proteins related to the MFS superfamily.


Pssm-ID: 432817 [Multi-domain]  Cd Length: 362  Bit Score: 46.08  E-value: 2.27e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   4 FFIGASLSLVVPFMSLYVEELGARGSMVEFYSGLAVsstaLTAALLSPVWGSLADRYG-RKPMMIRAAFAMTFTMGGLAF 82
Cdd:pfam12832   9 FFYFAALGCLLPYWGLYLRSIGLNPSEIGLITAILP----LTRILAPPIWGWLADRTGkRKAVVRLASILAAVLFLSVLF 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  83 VP---NVFWLIVLRLLNGVFSGYVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVaqSLGMRNVFLLVGF 159
Cdd:pfam12832  85 IPislTFWWLALLVVLFSFFWNAILPQFEVATLQHLGEKRKDYGRQRLWGSVGFALSVFGLGALF--DHYSVGLLPSVLF 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 160 FLFVVTLWTIFGIKEDFHPVSKGKEVSTKQLFQRIPQKSILFGLFITSMVIQMIGQSISPILTLYIRSLGQKENLLLVSG 239
Cdd:pfam12832 163 YLFAALMLLSLLLPLAPPEMEYESKGGSKAVFWNLLKQPEVIIFFLAAFLLGFSHGPFYTFLFLYLENLGASNTLLGALW 242
                         250
                  ....*....|....*..
gi 1317668737 240 AIVSAMGISSIFSSSWL 256
Cdd:pfam12832 243 ALGVVAEIPLFFYAHRL 259
MFS_MucK cd17371
Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; ...
16-164 2.90e-05

Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340929 [Multi-domain]  Cd Length: 389  Bit Score: 45.76  E-value: 2.90e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  16 FMSLYVEELGARGSMVEFYSGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLRLL 95
Cdd:cd17371    17 LLGLVLPALIAEFGLDEAEAGLLGTVTLAGGAIGGILGGILADRFGRVRVLVITILLFAVFTLLCGFAQNYWQLLILRAL 96
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1317668737  96 NGV-FSGYVPNSTALIASQAPKKHSGYALGTLSTGVVAG----TLMGPLLGGMVAQSLGMRNVFLLVGFFLFVV 164
Cdd:cd17371    97 AGLgFGGEWAAGAALMAEYVPARHRGKALGYVQSGWAVGwllaTLLAALLFPLLPPEIAWRVLFLLGALPALLV 170
MFS_SLC45_SUC cd17313
Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily ...
43-163 4.04e-05

Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters; This group includes the solute carrier 45 (SLC45) family as well as plant sucrose transporters (SUCs or SUTs) and similar proteins such as Schizosaccharomyces pombe general alpha-glucoside permease. the SLC45 family is composed of four (A1-A4) vertebrate proteins as well as related insect proteins such as Drosophila sucrose transporter SCRT or Slc45-1. Members of this group transport sucrose and other sugars like maltose into the cell, with the concomitant uptake of protons (symport system). Plant sucrose transporters are crucial to carbon partitioning, playing a key role in phloem loading/unloading. They play a key role in loading and unloading of sucrose into the phloem and as a result, they control sucrose distribution throughout the whole plant and drive the osmotic flow system in the phloem. They also play a role in the exchange of sucrose between beneficial symbionts (mycorrhiza and Rhizobium) as well as pathogens such as nematodes and parasitic fungi. There are nine sucrose transporter genes in Arabidopsis and five in rice. Vertebrate SLC45 family proteins have been implicated in the regulation of glucose homoeostasis in the brain (SLC45A1), with skin and hair pigmentation (SLC45A2), and with prostate cancer and myelination (SLC45A3). Mutations in SLC45A2, also called MATP (membrane-associated transporter protein) or melanoma antigen AIM1, cause oculocutaneous albinism type 4 (OCA4), an autosomal recessive disorder of melanin biosynthesis that results in congenital hypopigmentation of ocular and cutaneous tissues. The SLC45 family and related sugar transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340871 [Multi-domain]  Cd Length: 421  Bit Score: 45.31  E-value: 4.04e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  43 ALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLRLLNGVFSG---YVPNSTALIASQAPKKHS 119
Cdd:cd17313   291 SLAFLIFSLPIGKLGKKIGRKKVYLIGLVLFAVGMALMALVHNVTVALVLFALGGIGWAtinINPYPLVSDYHSESGRGQ 370
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 1317668737 120 GYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGFFLFV 163
Cdd:cd17313   371 GTDTGLLNLAISLAQILVSLLAGPIIDVKGYGTVFPVAAVASFL 414
BtlA COG2270
MFS-type transporter involved in bile tolerance, Atg22 family [General function prediction ...
42-162 5.20e-05

MFS-type transporter involved in bile tolerance, Atg22 family [General function prediction only];


Pssm-ID: 441871 [Multi-domain]  Cd Length: 424  Bit Score: 45.14  E-value: 5.20e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  42 TALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLRLLNGVFSG-YVPNSTALIASQAPKKHSG 120
Cdd:COG2270   283 VQIVAALGALLFGRLDDRIGPKRVILVSLVIWIVVCLAAYFLTTALAFWILGLLIGLVMGgIQALSRSLLARLIPPGREA 362
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 1317668737 121 YALGTLSTGVVAGTLMGPLLGGMVAQSLG-MRN------VFLLVGFFLF 162
Cdd:COG2270   363 EFFGLYALSGKAASFLGPLLFGLVTQLTGsQRLgilsliVFFVIGLVLL 411
PRK12307 PRK12307
MFS transporter;
1-308 5.31e-05

MFS transporter;


Pssm-ID: 237051 [Multi-domain]  Cd Length: 426  Bit Score: 44.92  E-value: 5.31e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   1 MGNFFIGASLSLVVPFMSLYVEELGARGSMVEFYSGLAVSSTALTAALlspvWGSLADRYGRKPMMIRAAFAMTFTMGGL 80
Cdd:PRK12307   25 LGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGAL----FGLLADKFGRKPLMMWSIVAYSVGTGLS 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  81 AFVPNVFWLIVLRLLNGV-FSGYVPNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFlLVGF 159
Cdd:PRK12307  101 GLASGVIMLTLSRFIVGMgMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAF-FVGL 179
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 160 FLFVVTLW--------------TIFGIKEDFHPVSKGKEVSTKQLFQRiPQKSILFGLFITSMVIQMIGQSISPILTLYI 225
Cdd:PRK12307  180 LPVLLVIYirarapeskeweeaKLSGKGKHSQSAWSVFSLSMKGLFNR-AQFPLTLCVFIVLFSIFGANWPIFGLLPTYL 258
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 226 RslGQKENLLLVSgAIVSAMGISSIFSSSWLGKLGDKMGNHRLLLLALLYSFVIYIFCARAGTPLELGIYRFLFGL---- 301
Cdd:PRK12307  259 A--GEGFDTGVVS-NLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLmatn 335

                  ....*...
gi 1317668737 302 -GTGALLP 308
Cdd:PRK12307  336 vGVGGLVP 343
emrD PRK11652
multidrug transporter EmrD;
44-174 5.87e-05

multidrug transporter EmrD;


Pssm-ID: 183259 [Multi-domain]  Cd Length: 394  Bit Score: 44.90  E-value: 5.87e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  44 LTAALLSPVWGSLADRYGRKPMMIraAFAMTFTMGGL--AFVPNVFWLIVLRLLNGVFSGyvpnSTALIASQAPKKH-SG 120
Cdd:PRK11652   54 LTYGLSQLFYGPLSDRVGRRPVIL--VGMSIFILGTLvaLFAHSLTVLIAASAIQGLGTG----VGGVMARTLPRDLyEG 127
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1317668737 121 YAL----GTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGFFLFVVTLWTIFGIKE 174
Cdd:PRK11652  128 TQLrhanSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPE 185
2A0115 TIGR00895
benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and ...
239-359 6.98e-05

benzoate transport; [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273327 [Multi-domain]  Cd Length: 398  Bit Score: 44.65  E-value: 6.98e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 239 GAIVSAMGISSIFSSSWLGKLGDKMGNHRLLLLALLYSFVIYIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKIT 318
Cdd:TIGR00895  55 GFLFSAGLIGMAFGALFFGPLADRIGRRRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYA 134
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1317668737 319 PQEGISRIFSYNQTFFYIGGVIGPLMGSAISVHFGYHWVFY 359
Cdd:TIGR00895 135 PKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFY 175
MFS_SV2_like cd17316
Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the ...
235-356 1.04e-04

Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily; This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340874 [Multi-domain]  Cd Length: 353  Bit Score: 43.74  E-value: 1.04e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 235 LLVSGAIVSAMGISSIFSSSWLGKLGDKMGNHRLLLLALLYSFVIYIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLL 314
Cdd:cd17316    35 LLQTGLLFAAGFLGRPIGALLFGYLGDRIGRKKALILTLLLFGLATLLIGLLPTPILLLVLRFLQGIGIGGEYPGASTYV 114
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1317668737 315 NKITPQEGISRIFSYNQTFFYIGGVIGPLMGSAISVHFGYHW 356
Cdd:cd17316   115 AEFAPSKRRGFALGLLQSGWALGALLAALVASLLIPLLSGDW 156
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
203-356 1.05e-04

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 43.95  E-value: 1.05e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 203 LFITSMVIQMIGQSISPILTLYIRSLGQKENLLlvsGAIVSAMGISSIFSSSWLGKLGDKMGNHRLLLLALLYSFVIYIF 282
Cdd:cd06174     1 LLLGFFLTGLARGLISPLLPALLQSFGLSASQL---GLLFALFSLGYALLQPLAGLLADRFGRRPVLLLGLLLFALGALL 77
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1317668737 283 CARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITPQEGISRIFSYNQTFFYIGGVIGPLMGSAISVHFGYHW 356
Cdd:cd06174    78 FAFAPSFWLLLLGRFLLGLGSGLIDPAVLALIADLFPERERGRALGLLQAFGSVGGILGPLLGGILASSLGFGW 151
MFS_Azr1_MDR_like cd17502
Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance ...
283-359 1.34e-04

Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including various Saccharomyces cerevisiae proteins such as azole resistance protein 1 (Azr1p), vacuolar basic amino acid transporter 1 (Vba1p), vacuolar basic amino acid transporter 5 (Vba5p), and Sge1p (also known as Nor1p, 10-N-nonyl acridine orange resistance protein, and crystal violet resistance protein). MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341045 [Multi-domain]  Cd Length: 337  Bit Score: 43.71  E-value: 1.34e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1317668737 283 CARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITPQEGISRIFSYNQTFFYIGGVIGPLMGSAISVHFGYHWVFY 359
Cdd:cd17502    77 CGLAPNMTMLIVGRAIQGIGGGGLMSLAFIIIADLVPPRERGKYQGYIGAVFGIASVAGPLIGGAFTDHLSWRWCFY 153
MFS_SLC22 cd17317
Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major ...
32-103 2.04e-04

Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily; The Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters includes organic cation transporters (OCTs), organic zwitterion/cation transporters (OCTNs), and organic anion transporters (OATs). SLC22 transporters interact with a variety of compounds that include drugs of abuse, environmental toxins, opioid analgesics, antidepressant and anxiolytic agents, and neurotransmitters and their metabolites. The SLC22 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340875 [Multi-domain]  Cd Length: 331  Bit Score: 42.95  E-value: 2.04e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1317668737  32 EFYSGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLRLLNGVFSGYV 103
Cdd:cd17317    24 DWLVALVQTIFFLGVLIGSLLFGYLADRFGRRPVLLLGLVLQIVCGVLSAFSPSYELFLVLRFLVGVTSAGI 95
MFS_OAT cd17374
Organic anion transporters of the Major Facilitator Superfamily of transporters; Organic anion ...
50-167 2.21e-04

Organic anion transporters of the Major Facilitator Superfamily of transporters; Organic anion transporters (OATs) generally display broad substrate specificity and they facilitate the exchange of extracellular with intracellular organic anions (OAs). Several OATs have been characterized including OAT1-10 and urate anion exchanger 1 (URAT1, also called SLC22A12). Many OATs occur in renal proximal tubules, the site of active drug secretion. OATs mediate the absorption, distribution, and excretion of a diverse array of environmental toxins, and clinically important drugs, including anti-HIV therapeutics, anti-tumor drugs, antibiotics, anti-hypertensives, and anti-inflammatories, and therefore is critical for the survival of the mammalian species. OAT falls into the SLC22 (solute carrier 22) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340932 [Multi-domain]  Cd Length: 341  Bit Score: 43.05  E-value: 2.21e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  50 SPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLRLLNGVF-SGYVPNSTALIASQAPKKHSGYAlGTLST 128
Cdd:cd17374    52 ALIFGHLSDRFGRKFILLLSLLQLAIFGTCAAFAPTFPVYCVLRFLAGFAvSGISINTLILGTEWTTPRHRALA-ITLTS 130
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1317668737 129 GVVAGTLMgpLLGGmVAQSLGMRNVFLLVG---FFLFVVTLW 167
Cdd:cd17374   131 CFFSIGQM--LLAG-LAYAIRDWRLLQLVVsvpFFLFFLYSW 169
MFS_YjiJ cd06180
Uncharacterized protein YjiJ and similar proteins of the Major Facilitator Superfamily of ...
48-353 2.23e-04

Uncharacterized protein YjiJ and similar proteins of the Major Facilitator Superfamily of transporters; This family is composed of Escherichia coli YjiJ and other uncharacterized proteins. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340869 [Multi-domain]  Cd Length: 371  Bit Score: 43.06  E-value: 2.23e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  48 LLSPVWGSLADRYGRKPMMIRAAFAMT-FTMGGLAFVPNVFWLIVLRLLNGVFSGYVPNSTALIASQ-APKKHSGYALGT 125
Cdd:cd06180    48 LVGALLASFLRRRGRARRLIRGGLLLTvLLLAAMALTSGFAALLALRFLAGAASAFVFVFGSNLVLHhATAAGRGHLIGL 127
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 126 LSTGVVAGTLMGPLL-GGMVAQSLGMRNVFLLVGFF----LFVVTLWTIFGIKEDFHPVSKGKEVSTKQLFQRIpqkSIL 200
Cdd:cd06180   128 LFAGVGLGIALSGLLvPAGLGGGLSWRAGWLALALLsavlLLLSFLLLRRGPSAPTEASAAESAPGLNRPLWRL---ALA 204
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 201 FGLFITSMVIQMIgqsispILTLYIRSLGQKEnllLVSGAIVSAMGISSIFSSSWLGKLGDKMGNHRLLLLALLYSFVIY 280
Cdd:cd06180   205 YGLFGFGYIITAT------FLPLIARETGAGS---LLAGLLWSLFGLAAVPSCFLWGALSDRWGTRRALAANLLVQAVGV 275
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1317668737 281 IFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITPQEGIsRIFSYNQTFFYIGGVIGPLMGSAISVHFG 353
Cdd:cd06180   276 LLPLLSPGPAGLVLSAVLFGGTFMAITALVMALARELAPPAAP-RALALMTASFGVGQILGPLLAGWLADATG 347
MFS_SLC22A1_2_3 cd17379
Solute carrier family 22 members 1, 2, and 3 (also called Organic cation transporters 1, 2, ...
54-100 2.40e-04

Solute carrier family 22 members 1, 2, and 3 (also called Organic cation transporters 1, 2, and 3) of the Major Facilitator Superfamily of transporters; This sufamily includes solute carrier family 22 member 1 (SLC22A1, also called organic cation transporter 1 or OCT1), SLC22A2 (or OCT2), SLC22A3 (or OCT3), and similar proteins. OCT1-3 have similar basic functional properties: they are able to translocate a variety of structurally different organic cations in both directions across the plasma membrane; to translocate organic cations independently from sodium, chloride or proton gradients; and to function as electrogenic uniporters for cations or as electroneutral cation exchangers. They show overlapping but distinct substrate and inhibitor specificities, and different tissue expression pattern. In humans, OCT1 is strongly expressed in the liver, OCT2 is highly expressed in the kidney where it is localized at the basolateral membrane of renal proximal tubules, and OCT3 is most strongly expressed in skeletal muscle. OCTs are broad-specificity transporters that play a critical role in the excretion and distribution of endogeneous organic cations and for the uptake, elimination and distribution of cationic drugs, toxins, and environmental waste products. The SLC22A1-3 subfamily belongs to the Solute carrier 22 (SLC22) family of organic cation/anion/zwitterion transporters of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340937 [Multi-domain]  Cd Length: 340  Bit Score: 42.72  E-value: 2.40e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1317668737  54 GSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLRLLNGVFS 100
Cdd:cd17379    54 GYLADRFGRKVCFLISILGNGVSGVLMAFSPNYPWFLIFRFLQGLFG 100
MFS_NepI_like cd17324
Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator ...
200-363 3.32e-04

Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340882 [Multi-domain]  Cd Length: 370  Bit Score: 42.54  E-value: 3.32e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 200 LFGLFITSMVIQMIGQSISPILTLYIRSLGQKENLllvSGAIVSAMGISSIFSSSWLGKLGDKMGNHRLLLLALLYSFVI 279
Cdd:cd17324     1 LLALALAAFAIGTTEYVIQGLLPDIARDFGVSVAQ---AGLLVSAYALGYALGALLLGPLSDRIERRRLLLVLLLLFILG 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 280 YIFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITPQEGISRIFSYNQTFFYIGGVIGPLMGSAISVHFGYHWVFY 359
Cdd:cd17324    78 NLLAALAPSFALLLLARALAGLAHGGFWAIAAAYAADLVPPEKRGRAIGLVFSGLTLGLVLGRPLGGLLGQLLGWRAAFL 157

                  ....
gi 1317668737 360 STAG 363
Cdd:cd17324   158 AIAV 161
PRK11551 PRK11551
putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
54-159 3.54e-04

putative 3-hydroxyphenylpropionic transporter MhpT; Provisional


Pssm-ID: 236927 [Multi-domain]  Cd Length: 406  Bit Score: 42.26  E-value: 3.54e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  54 GSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLRLLNGV-FSGYVPNSTALIASQAPKKHSGYALGTLSTGVVA 132
Cdd:PRK11551   71 GRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVgLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPF 150
                          90       100
                  ....*....|....*....|....*..
gi 1317668737 133 GTLMGPLLGGMVAQSLGMRNVFLLVGF 159
Cdd:PRK11551  151 GGALASVIGVLAAGDAAWRHIFYVGGV 177
MFS_CitA cd17368
Citrate-proton symporter of the Major Facilitator Superfamily of transporters; Citrate-proton ...
52-208 3.66e-04

Citrate-proton symporter of the Major Facilitator Superfamily of transporters; Citrate-proton symporter, also called citrate carrier protein or citrate transporter or citrate utilization protein A (CitA), is a proton symporter that functions in the uptake of citrate across the boundary membrane. It allows the utilization of citrate as a sole source of carbon and energy. In Klebsiella pneumoniae, the gene encoding this protein is called citH, instead of citA, which is the case for Escherichia coli and other organisms. CitA belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340926 [Multi-domain]  Cd Length: 407  Bit Score: 42.36  E-value: 3.66e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  52 VWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNV----FW----LIVLRLLNGV-FSGYVPNSTALIASQAPKKHSGYA 122
Cdd:cd17368    59 VLGAYADRIGRKPAMTLTLAIMALGTLLIALAPTYatigIAapllVLLARLLQGFaAGGEVGGVTAYLVEAAPPGRRGFY 138
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 123 ----LGTLSTGVVAGTLMGPLL----GGMVAQSLGMRnVFLLVGFFLFVVTLWTIFGIKEDFHPVSKGKEVSTKQLFQRI 194
Cdd:cd17368   139 tswqSASQQVAIVAGALVGYLLsltlTAEALAEWGWR-IPFFIGLLIIPLGLWLRRSLEETEAFLERKARPTRRELFALL 217
                         170
                  ....*....|....*.
gi 1317668737 195 PQ--KSILFGLFITSM 208
Cdd:cd17368   218 ANnrRIILLGMLLVAG 233
PRK03893 PRK03893
putative sialic acid transporter; Provisional
32-167 3.79e-04

putative sialic acid transporter; Provisional


Pssm-ID: 179668 [Multi-domain]  Cd Length: 496  Bit Score: 42.38  E-value: 3.79e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  32 EFYSGLAVSSTALTAALLSP-----VWGSLADRYGRKPMMIRAAFAmtFTMGGLA--FVPNVFWLIVLRLLNGV-FSGYV 103
Cdd:PRK03893   49 EFGLTTVQAASLISAAFISRwfgglLLGAMGDRYGRRLAMVISIVL--FSVGTLAcgFAPGYWTLFIARLVIGMgMAGEY 126
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1317668737 104 PNSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLvGFFLFVVTLW 167
Cdd:PRK03893  127 GSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFI-GILPIIFALW 189
MFS_FsR cd17478
Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; ...
16-163 4.26e-04

Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341031 [Multi-domain]  Cd Length: 365  Bit Score: 42.16  E-value: 4.26e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  16 FMSLYVEELGARgsmvEFYSGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLRLL 95
Cdd:cd17478   217 FLPFYLVQRGYS----LVFAGLLLSLFLFAGAIGTLIGGPLSDRFGRRRVIIASLLLAAPFLLLFLLTPGIWSYILLVLA 292
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1317668737  96 NGVFSGYVPNSTALIASQAPkKHSGYALG-TLSTGVVAGTLMGPLLGGmVAQSLGMRNVFLLVGFFLFV 163
Cdd:cd17478   293 GFLLFASFPVTVVLAQELLP-GNVGLASGlMMGLSFGLGGIGAPVLGA-LADAFGLESVLLILALLPLL 359
MFS_SLC18B1 cd17385
Solute carrier family 18 member B1 of the Major Facilitator Superfamily of transporters; ...
4-172 6.40e-04

Solute carrier family 18 member B1 of the Major Facilitator Superfamily of transporters; Solute carrier family 18 member B1 (SLC18B1) is the fourth member of the SLC18 transporter family, which includes vesicular monoamine transporters and vesicular acetylcholine transporter. It is predominantly expressed in the hippocampus and is associated with vesicles in astrocytes. It actively transports spermine and spermidine by exchange of H(+), and has been suggested to be a vesicular polyamine transporter (VPAT). SLC18B1 belongs to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340943 [Multi-domain]  Cd Length: 390  Bit Score: 41.43  E-value: 6.40e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   4 FFIGASLSLVVPFMSLYVEELGARGSMVefysGLAVSSTALTAALLSPVWGSLADRYG-RKPMMIraaFAMTFTMGGLAF 82
Cdd:cd17385   211 VSGSVSLGFLDPTLSPHLRQFKLSPGQV----GLMFLILAGSYAISAPLWGWLSDKKKiPKWLMV---IGSIITGVGFLL 283
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  83 V--------PNVFWLIVLRLLNGVFS---GYVPNSTALIASqAPKKHSGYALGTLstGVVA---------GTLMGPLLGG 142
Cdd:cd17385   284 LgpapllpiKSELWMVIIGLVLLGLSlgaALVPTFPELLNC-AREYGFPDNLSTY--GLVSglfnaafslGAFIGPTLGG 360
                         170       180       190
                  ....*....|....*....|....*....|
gi 1317668737 143 MVAQSLGMRNVFLLVGFFLFVVTLWTIFGI 172
Cdd:cd17385   361 FLLERLGFEWAATIQAGLAFVVGILMSIYY 390
PRK11043 PRK11043
Bcr/CflA family multidrug efflux MFS transporter;
52-191 7.00e-04

Bcr/CflA family multidrug efflux MFS transporter;


Pssm-ID: 182924 [Multi-domain]  Cd Length: 401  Bit Score: 41.42  E-value: 7.00e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  52 VWGSLADRYGRKPMMIrAAFAMtFTMG--GLAFVPNVFWLIVLRLLN--GVFSGYVpNSTALIASQAPKKHSGYALGTLS 127
Cdd:PRK11043   60 LWGPLSDRYGRKPVLL-AGLSL-FALGslGMLWVESAAQLLVLRFVQavGVCSAAV-IWQALVIDRYPAQKANRVFATIM 136
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1317668737 128 TGVVAGTLMGPLLGGMVAQSLGMRNVFL---LVGFFLFVVTLWTIFGIKEdfhPVSKGKEVSTKQLF 191
Cdd:PRK11043  137 PLVALSPALAPLLGAWLLNHFGWQAIFAtlfAITLLLILPTLRLKPSKKA---RKQSQDALTFKQLL 200
MFS_GLUT10_12_Class3_like cd17362
Glucose transporter (GLUT) types 10 and 12, Class 3 GLUTs, and similar transporters of the ...
7-149 7.58e-04

Glucose transporter (GLUT) types 10 and 12, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of glucose transporter type 10, GLUT12, plant polyol transporters (PLTs), and similar proteins. GLUTs, also called Solute carrier family 2, facilitated glucose transporters (SLC2A), are a family of proteins that facilitate the transport of hexoses such as glucose and fructose. There are fourteen GLUTs found in humans; they display different substrate specificities and tissue expression. They have been categorized into three classes based on sequence similarity: Class 1 (GLUTs 1-4, 14); Class 2 (GLUTs 5, 7, 9, and 11); and Class 3 (GLUTs 6, 8, 10, 12, and HMIT). GLUT proteins are comprised of about 500 amino acid residues, possess a single N-linked oligosaccharide, and have 12 transmembrane segments. They belong to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340920 [Multi-domain]  Cd Length: 389  Bit Score: 41.18  E-value: 7.58e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   7 GASLSLVVPFMSLyveelGARGSMVEFYSGLAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNV 86
Cdd:cd17362    18 GALLSITSPALSG-----TDWYNLSSLQSGLVVSGSLLGALLGSLVAGALIDRLGRRKELILAALLYLVGSLVTGLAPSY 92
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1317668737  87 FWLIVLRLLNGVFSGYVPNSTAL-IASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLG 149
Cdd:cd17362    93 PVLLVGRLIYGVGIGLAMHAAPVyIAETSPSHIRGLLVSLKELFIVLGILLGYVSGYAFADVVG 156
MFS_YxiO_like cd17482
Bacillus subtilis YxiO, Listeria monocytogenes BtlA, and similar transporters of the Major ...
15-166 9.06e-04

Bacillus subtilis YxiO, Listeria monocytogenes BtlA, and similar transporters of the Major Facilitator Superfamily; This family is composed of Bacillus subtilis MFS-type transporter YxiO, and similar proteins including Listeria monocytogenes BtlA. The function of B. subtilis YxiO is still unknown, and L. monocytogenes BtlA is a putative secondary transporter involved in bile tolerance and general stress resistance. This family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341035 [Multi-domain]  Cd Length: 362  Bit Score: 41.05  E-value: 9.06e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  15 PFMSLYVEElGARGSMVEFYSGLAVSSTALTAALLSPVWGSLADRYG-RKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLR 93
Cdd:cd17482    22 VYFKAVAAQ-GASPVTSTALWGYANSIASLVIALLAPILGAIADYSGrKKRFLAFFCLIGVVSTALLFFVTPGQWLLALL 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  94 LL---NGVFSGYVPNSTALIASQAPKKH------SGYALG----TLSTGVVAGTLMGPLLGGMvAQSLGMRNVFLLVGFF 160
Cdd:cd17482   101 LFilaNIGFSGANVFYDAFLPDVASPERmdrvssLGYALGyiggGLLFAVNLVLILGPDAFGL-DTAEAVRLSFLSVALW 179

                  ....*.
gi 1317668737 161 LFVVTL 166
Cdd:cd17482   180 WALFSI 185
MFS_SLC17 cd17318
Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily of transporters; The ...
54-169 9.15e-04

Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily of transporters; The Solute carrier 17 (SLC17) family is primarily involved in the transport of organic anions. There are nime human proteins belonging to this family including: the type I phosphate transporters (SLC17A1-4) that were initially identified as sodium-dependent inorganic phosphate (Pi) transporters but are now known to be involved in tha transport of organic anions; lysosomal acidic sugar transporter (SLC17A5 or sialin), vesicular glutamate transporters (VGluT1#3 or SLC17A7, SLC17A6, and SLC17A8, respectively), and a vesicular nucleotide transporter (VNUT or SLC17A9). SLC17A1 and SLC17A3 have roles in the transport of urate and para-aminohippurate, respectively. The SLC17 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340876 [Multi-domain]  Cd Length: 389  Bit Score: 41.07  E-value: 9.15e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  54 GSLADRYGRKPMM-IRAAFAMTFTMgglaFVP-----NVFWLIVLRLLNGVFSGYV-PNSTALIASQAPKKHSGYALGTL 126
Cdd:cd17318    77 GYLAEKYGAKRVLgYSILITALLTL----LTPlaargGYGALIVLRILQGLAQGVTfPAMHALWAKWAPPLERSRLTSIA 152
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1317668737 127 STGVVAGTLMGPLLGGMVAQSLGMRNVFLLVG---------FFLFVVTLWTI 169
Cdd:cd17318   153 YSGSQFGTVIAMPLSGFLCESLGWPSIFYIFGglgllwcllWFFLVLPVWAI 204
MFS_Set cd17471
Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters; ...
203-363 9.34e-04

Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters; This family is composed of sugar transporters such as Escherichia coli Sugar efflux transporter SetA, SetB, SetC and other sugar transporters. SetA, SetB, and SetC are involved in the efflux of sugars such as lactose, glucose, IPTG, and substituted glucosides or galactosides. They may be involved in the detoxification of non-metabolizable sugar analogs. The Set family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341024 [Multi-domain]  Cd Length: 371  Bit Score: 40.99  E-value: 9.34e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 203 LFITSMVIQMIGQSISPILTLY-IRSLGQKENLLlvsGAIVSAMGISSIFSSSWLGKLGDKMGNHRLLLLALLYSFVI-Y 280
Cdd:cd17471     1 LLLATLLTGLAGAFVLPYLSLFlTEELGASPLQI---GIFMTLSALSGIVVSQWLGRLSDRGGDRKPLILLALLAGALgY 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 281 IFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITPQEGISRIFSYN---QTFFYIGGVIGPLMGSAISVHFGYHWV 357
Cdd:cd17471    78 LLFAFLRNYWVLLLVGVVLLSLGAAAFPQLFALAREYADRSSGRDATLFNsvlRAAFSLAWVIGPPLAFLLLDVLGFTGL 157

                  ....*.
gi 1317668737 358 FYSTAG 363
Cdd:cd17471   158 FLLAAL 163
PRK11102 PRK11102
Bcr/CflA family multidrug efflux MFS transporter;
52-174 1.46e-03

Bcr/CflA family multidrug efflux MFS transporter;


Pssm-ID: 182964 [Multi-domain]  Cd Length: 377  Bit Score: 40.28  E-value: 1.46e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  52 VWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLRLLNGvFSGYVPN--STALIASQAPKKHSGYALGTLSTG 129
Cdd:PRK11102   45 FYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHG-LAAAAASvvINALMRDMFPKEEFSRMMSFVTLV 123
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1317668737 130 VVAGTLMGPLLGGMVAQSLGMRNVFLLVGFFLFVVTLWTIFGIKE 174
Cdd:PRK11102  124 MTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPE 168
PRK14995 PRK14995
SmvA family efflux MFS transporter;
46-166 1.58e-03

SmvA family efflux MFS transporter;


Pssm-ID: 184957 [Multi-domain]  Cd Length: 495  Bit Score: 40.48  E-value: 1.58e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  46 AALLSPVwGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLRLLNGVFSGY-VPNSTALI-ASQAPKKHSGYAL 123
Cdd:PRK14995   55 AGMVLPM-GALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMiVPATLAGIrATFTEEKQRNMAL 133
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 1317668737 124 GTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLL-VGFFLFVVTL 166
Cdd:PRK14995  134 GVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLInVPIVLVVMGL 177
MFS_FucP_MFSD4_like cd17333
Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein ...
54-353 2.17e-03

Bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4, and similar proteins; This family is composed of bacterial L-fucose permease (FucP), eukaryotic Major facilitator superfamily domain-containing protein 4 (MFSD4) proteins, and similar proteins. L-fucose permease facilitates the uptake of L-fucose across the boundary membrane with the concomitant transport of protons into the cell; it can also transport L-galactose and D-arabinose. The MFSD4 subfamily consists of two vertebrate members: MFSD4A and MFSD4B. The function of MFSD4A is unknown. MFSD4B is more commonly know as Sodium-dependent glucose transporter 1 (NaGLT1), a primary fructose transporter in rat renal brush-border membranes that also facilitates sodium-independent urea uptake. The FucP/MFSD4 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340891 [Multi-domain]  Cd Length: 372  Bit Score: 40.00  E-value: 2.17e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  54 GSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLRLLNGVFSGYVPNSTALIASQAPKKHSGYALGTLSTGVVAG 133
Cdd:cd17333    52 GFLMKRLGRRRTLILGLLLISLALALIFATPSIYLFVVLMFLAGLGAGILDTGANTFVGALFEESSATRLNVLHGFFGLG 131
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 134 TLMGPLLGG-MVAQSLGMRNVFLLVGFFLFVVTLwTIFGIKEDFHPVSKGKEVSTKQLFQRIPQKSILFGLFITSMVIQM 212
Cdd:cd17333   132 ALIGPLIATsLLTSELSWSWAYLIIGLIYLLLAI-LILLTLFPELPSARNPQQSVGAFSASASRLLRNPSIILGALALFL 210
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 213 -IGQSISPILTLYIRSLGQKENLLLVSGAIVSAMGISSIFSSSWLGKLGDKMGNHRLLLLALLYSFVIYIFCARAGTPLE 291
Cdd:cd17333   211 yVGAETAFSSWVPSYLVEKKHVSDGLAGYLLSGFWVGITIGRLLGGPISRRIKPHTLLVLSGSGALLGLLILLLAPTLVV 290
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1317668737 292 LGIYRFLFGLGTGALLPGVSSLLNKITPQEGISRIfSYNQTFFYIGGVIGPLMGSAISVHFG 353
Cdd:cd17333   291 GLVATALLGLFMAALFPTILSLGISNLPYAKGKGT-SVLLAAGSIGGAIIPFIMGFIAEAVG 351
Sugar_tr pfam00083
Sugar (and other) transporter;
226-341 2.25e-03

Sugar (and other) transporter;


Pssm-ID: 395036 [Multi-domain]  Cd Length: 452  Bit Score: 39.95  E-value: 2.25e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 226 RSLGQKENLLLVSGAIVSAMGISSIFSSSWLGKLGDKMGNHRLLLLALLYSF---VIYIFCARAGTPLELGIYRFLFGLG 302
Cdd:pfam00083  36 KSVSSLAALSVLSGLIVSIFSVGCFIGSLFAGKLGDRFGRKKSLLIANVLFVigaVLQGAAKGKWSVYQLIVGRVLVGIG 115
                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 1317668737 303 TGALLPGVSSLLNKITPQEGISRIFSYNQTFFYIGGVIG 341
Cdd:pfam00083 116 VGGASVLAPMYISEIAPKKLRGALGSLYQLAITFGILLA 154
MFS_LmrB_MDR_like cd17503
Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) ...
281-359 2.84e-03

Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily; This subfamily is composed of multidrug resistance (MDR) transporters including Bacillus subtilis lincomycin resistance protein LmrB, and several proteins from Escherichia coli such as the putative MDR transporters EmrB, MdtD, and YieQ. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin. This subfamily belongs to the Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters (MMR-like MDR transporter) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341046 [Multi-domain]  Cd Length: 380  Bit Score: 39.48  E-value: 2.84e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1317668737 281 IFCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITPQEGISRIFSYNQTFFYIGGVIGPLMGSAISVHFGYHWVFY 359
Cdd:cd17503    76 LLCGLAPNLASLIIFRILQGFGGGVLIPLAQTILLRIYPPEKRGAAMGLVGLVILLAPAIGPTLGGWLTDNLSWRWIFY 154
MFS_FBT cd17484
Folate-biopterin transporter of the Major Facilitator Superfamily of transporters; The ...
51-190 3.31e-03

Folate-biopterin transporter of the Major Facilitator Superfamily of transporters; The Folate-biopterin transporter (FBT) family includes folate carriers related to those of trypanosomatids in higher plant plastids and cyanobacteria. FBT mediates folate monoglutamate transport involved in tetrahydrofolate biosynthesis. It also mediates transport of antifolates, such as methotrexate and aminopterin. The FBT family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341037 [Multi-domain]  Cd Length: 399  Bit Score: 39.13  E-value: 3.31e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  51 PVWGSLAD-----RYGRKPMMIRAAFAMTFTMGGLAFVPNV-FWLIVLRLLNGVFSGYVPNST--ALIASQAPKKHSGYA 122
Cdd:cd17484    50 PLYGLLSDsvpifGYRRKPYLILAGALGALSWLALALVSNSsLALALLLLLLASLGVAFSDVVidALVVEASRGAPQSLA 129
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1317668737 123 --LGTLSTGVVA-GTLMGPLLGGMVAQSLGMRNVFLLVGFFLFVVTLWTIFgIKEDFHPVSKGKEVSTKQL 190
Cdd:cd17484   130 gdLQSLCWGSSAiGGIVGSYFSGYLLELLGPRTVFAVTSFFPLLLLIVAFF-VKEERVPPHRTKENFDEQL 199
MFS_MCT9 cd17428
Monocarboxylate transporter 9 of the Major Facilitator Superfamily of transporters; ...
46-158 5.21e-03

Monocarboxylate transporter 9 of the Major Facilitator Superfamily of transporters; Monocarboxylate transporter 9 (MCT9) is also called Solute carrier family 16 member 9 (SLC16A9). It is an orphan transporter that is expressed in a number of tissues including intestine and kidney. A missense variant of MCT9 (K258T) is associated with significant increase in susceptibility to renal overload (ROL) gout with intestinal urate underexcretion. This suggests that MCT9 may have a role in intestinal urate excretion; it is possible that it transports urate. MCT9 belongs to the Monocarboxylate transporter (MCT) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340986 [Multi-domain]  Cd Length: 361  Bit Score: 38.64  E-value: 5.21e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  46 AALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIV-LRLLNGVFSGYVPNSTALIASQAPKKHSGYALG 124
Cdd:cd17428    51 GLIASPVCSACVSSFGARPVTIFSGFMVAGGLMLSAFAPNIYFLIFsYGIVVGLGCGLVYAATVTITCQYFDKRRGLALG 130
                          90       100       110
                  ....*....|....*....|....*....|....
gi 1317668737 125 TLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVG 158
Cdd:cd17428   131 LISTGSSVGLFIYAALQRELIELYGLDGCLLIVG 164
MFS_OFA_like cd17353
Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of ...
30-170 5.34e-03

Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of Oxalobacter formigenes oxalate:formate antiporter (OFA or OxlT) and similar proteins. O. formigenes, a commensal found in the gut of animals and humans, plays an important role in clearing dietary oxalate from the intestinal tract, which is carried out by OFA/OxlT, an anion transporter that facilitates the exchange of divalent oxalate with monovalent formate, the product of oxalate decarboxylation. This exchange generates an electrochemical proton gradient and is the source of energy for ATP synthesis in this cell. The OFA-like subfamily belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340911 [Multi-domain]  Cd Length: 389  Bit Score: 38.75  E-value: 5.34e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  30 MVEFYSGLAVSSTALTAALLS-------PVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLrLLNGVFSGY 102
Cdd:cd17353   239 IGQEFAGLDAGIAALAVSILSifngggrPFWGWLSDKIGRKNTLSIAFLIQGVAMFLLPFIGSVAVLFVL-GVALIGFCY 317
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1317668737 103 vPNSTALIASQAPK----KHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVGFFLFVVTLWTIF 170
Cdd:cd17353   318 -GGGFALFPALTADffgtKNAGTNYGLLYTAKGVGGLIGPIIAAYVLYTGGYNAAFIIAAALSLVALALALL 388
MFS_3 pfam05977
Transmembrane secretion effector; This is a family of transport proteins. Members of this ...
4-166 5.73e-03

Transmembrane secretion effector; This is a family of transport proteins. Members of this family include a protein responsible for the secretion of the ferric chelator, enterobactin, and a protein involved in antibiotic resistance.


Pssm-ID: 399164 [Multi-domain]  Cd Length: 523  Bit Score: 38.58  E-value: 5.73e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737   4 FFIGASLSLVVPFMSLYVEELGARGSMVEFYSGLAVSSTALTAALLSPvwgSLADRYGRKPMMIRAAFAMTFTMGGLAFV 83
Cdd:pfam05977 228 FAFGLSASAVWALLPLVARDLLDGDAIFYGILLGAVGVGAILGALSLP---RLRERLGSDRLVLLASVVTALVLLSLALA 304
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  84 PNVFWLIVLRLLNG-----VFSGYvpNSTALIASqaPKKHSGYALGTLSTGVVAGTLMGPLLGGMVAQSLGMRNVFLLVG 158
Cdd:pfam05977 305 PNLWLAIPVLLLGGaawitALTTL--NVAVQLSV--PRWVRGRALAVYQTVFFGGMAAGSWLWGAVAEALSVTGALLGAA 380

                  ....*...
gi 1317668737 159 FFLFVVTL 166
Cdd:pfam05977 381 AALLAGAA 388
MFS_HMIT_like cd17360
H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; ...
37-120 7.01e-03

H(+)-myo-inositol cotransporter and similar transporters of the Major Facilitator Superfamily; This subfamily is composed of myo-inositol/inositol transporters and similar transporters from vertebrates, plant, and fungi. The human protein is called H(+)-myo-inositol cotransporter/Proton myo-inositol cotransporter (HMIT), or H(+)-myo-inositol symporter, or Solute carrier family 2 member 13 (SLC2A13). HMIT is classified as a Class 3 GLUT (glucose transporter) based on sequence similarity with GLUTs, but it does not transport glucose. It specifically transports myo-inositol and is expressed predominantly in the brain, with high expression in the hippocampus, hypothalamus, cerebellum and brainstem. HMIT may be involved in regulating processes that require high levels of myo-inositol or its phosphorylated derivatives, such as membrane recycling, growth cone dynamics, and synaptic vesicle exocytosis. Arabidopsis Inositol transporter 4 (AtINT4) mediates high-affinity H+ symport of myo-inositol across the plasma membrane. The HMIT-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340918 [Multi-domain]  Cd Length: 362  Bit Score: 38.02  E-value: 7.01e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  37 LAVSSTALTAALLSPVWGSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNVFWLIVLRLL----NGVFSGYVPnstALIAS 112
Cdd:cd17360    39 LIVSSTVAGAAVGAAIGGWLNDRFGRRPCILLADALFTIGAIVMAAAPNKEVLIVGRVLvglgVGIASMTVP---LYIAE 115

                  ....*...
gi 1317668737 113 QAPKKHSG 120
Cdd:cd17360   116 AAPPRIRG 123
MFS_MFSD9 cd17390
Major facilitator superfamily domain-containing protein 9; Major facilitator superfamily ...
203-345 7.03e-03

Major facilitator superfamily domain-containing protein 9; Major facilitator superfamily domain-containing protein 9 (MFSD9) is expressed in the central nervous system (CNS) and in most peripheral tissues but at very low expression levels. The function of MFSD9 is unknown. MFSD9 belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340948 [Multi-domain]  Cd Length: 350  Bit Score: 38.36  E-value: 7.03e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737 203 LFITSMVIqmigqsisPILTLYIRSLGQKEnllLVSGAIVSAMGISSIFSSSWLGKLGDKMGNHRLLLLALLYSFVIYIF 282
Cdd:cd17390     9 LFGVSMIL--------PLLSTHIRSLGASP---TVIGLIGSVYGALQLFSSPLVGSWSDVVGRRPVLLICLLLTALGYVL 77
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1317668737 283 CARAGTPLELGIYRFLFGLgTGALLPGVSSLLNKITPQEGISRIFSYNQTFFYIGGVIGPLMG 345
Cdd:cd17390    78 LGFSTSLALLFLSRIPLGI-FKHTQSLCKAYLSDLVSEQERSRVLGRFNAASSLGFILGPVVG 139
PRK15402 PRK15402
MdfA family multidrug efflux MFS transporter;
12-98 8.34e-03

MdfA family multidrug efflux MFS transporter;


Pssm-ID: 185300 [Multi-domain]  Cd Length: 406  Bit Score: 38.00  E-value: 8.34e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  12 LVVPFMSLYVEELGArgsmvefysGLAVSSTALTAALLSPV---W--GSLADRYGRKPMMIRAAFAMTFTMGGLAFVPNV 86
Cdd:PRK15402   31 MIQPGMLAVVEDFNA---------GAEWVPTSMTAYLAGGMflqWllGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSI 101
                          90
                  ....*....|..
gi 1317668737  87 FWLIVLRLLNGV 98
Cdd:PRK15402  102 EQFTLLRFLQGI 113
efflux_EmrB TIGR00711
drug resistance transporter, EmrB/QacA subfamily; This subfamily of drug efflux proteins, a ...
282-359 9.10e-03

drug resistance transporter, EmrB/QacA subfamily; This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other]


Pssm-ID: 129794 [Multi-domain]  Cd Length: 485  Bit Score: 38.13  E-value: 9.10e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1317668737 282 FCARAGTPLELGIYRFLFGLGTGALLPGVSSLLNKITPQEGISRIFSYNQTFFYIGGVIGPLMGSAISVHFGYHWVFY 359
Cdd:TIGR00711  83 LCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFL 160
PRK03545 PRK03545
putative arabinose transporter; Provisional
70-167 9.31e-03

putative arabinose transporter; Provisional


Pssm-ID: 179591 [Multi-domain]  Cd Length: 390  Bit Score: 37.95  E-value: 9.31e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1317668737  70 AFAMTFTM-----GGLAFVPNVFWLIvlrllngvfsgyvpnSTALIASQAPKKHSGYALGTLSTGVVAGTLMGPLLGGMV 144
Cdd:PRK03545   92 ALAWNFTVllisrIGIAFAHAIFWSI---------------TASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVI 156
                          90       100
                  ....*....|....*....|...
gi 1317668737 145 AQSLGMRNVFLLVGFFLFVVTLW 167
Cdd:PRK03545  157 GQYLGWRTTFLAIGGGALITLLL 179
MFS_SLC17 cd17318
Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily of transporters; The ...
296-359 9.31e-03

Solute carrier 17 (SLC17) family of the Major Facilitator Superfamily of transporters; The Solute carrier 17 (SLC17) family is primarily involved in the transport of organic anions. There are nime human proteins belonging to this family including: the type I phosphate transporters (SLC17A1-4) that were initially identified as sodium-dependent inorganic phosphate (Pi) transporters but are now known to be involved in tha transport of organic anions; lysosomal acidic sugar transporter (SLC17A5 or sialin), vesicular glutamate transporters (VGluT1#3 or SLC17A7, SLC17A6, and SLC17A8, respectively), and a vesicular nucleotide transporter (VNUT or SLC17A9). SLC17A1 and SLC17A3 have roles in the transport of urate and para-aminohippurate, respectively. The SLC17 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340876 [Multi-domain]  Cd Length: 389  Bit Score: 37.98  E-value: 9.31e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1317668737 296 RFLFGLGTGALLPGVSSLLNKITPQEGISRIFSYNQTFFYIGGVIGPLMGSAISVHFGYHWVFY 359
Cdd:cd17318   118 RILQGLAQGVTFPAMHALWAKWAPPLERSRLTSIAYSGSQFGTVIAMPLSGFLCESLGWPSIFY 181
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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