|
Name |
Accession |
Description |
Interval |
E-value |
| flagella_HExxH |
NF033876 |
flagellinolysin; Flagellinolysin is a variant form of bacterial flagellin in with the normally ... |
112-469 |
2.84e-100 |
|
flagellinolysin; Flagellinolysin is a variant form of bacterial flagellin in with the normally hypervariable central region contains an M9 (MEROPS classification) family metalloprotease domain, with its signature HExxH motif. The founding member of the family, from the pathogen Clostridium haemolyticum, shows EDTA-sensitive metalloprotease activity. The large count of flagellin subunits in a complete flagellum means the capacity of flagellinolysin to perform as a protease may have implications for host-pathogen relationships.
Pssm-ID: 468217 Cd Length: 380 Bit Score: 307.66 E-value: 2.84e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 112 QLEIEELINAANGIAESANLGGDTPLLEGPDVNFTANSDADIFARV-TGMMEQAEANIKAHYGLVGDGeDTFQMLISNHD 190
Cdd:NF033876 2 QKEINQLKQEIDRIAETTEFNGKKLFDQGASVGSADPDKQAILDGLkSGWLENAEDLIKEYYGLTADG-ADLTVNLEYTD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 191 GAGNVVAFV-----TSAAGDVISMTLDRDDF------NGSISNI--DRIIEHEMVHAVMGNQIT-AAMPKWFTEGTAELI 256
Cdd:NF033876 81 GAGGTLAYVssgsgGGGKGGNLTLTIDMADFspanlpNGGTAPQylDRTIAHEMVHAVMGRTMNfSSLPTWFIEGTAEFI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 257 HGADDRLVVDVAG--DPAALMAGW--NPSSAANSADYSRAYVAARMLHDDLKSAGhSGGMSALMQTMAD--GDTLDSGLQ 330
Cdd:NF033876 161 HGADERLAADLAGgtSDAAGVAALfnGGAWTSTSADYSAGYAAVRYLHDQIKAAG-GGGIKDIMQYLKAnaGSTLDQALA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 331 KLLG---ISQADFETRVANEGASYI-ESMDLTNDDLGGIGALDSDAMGTRNAEDAVGDAFSY-AEQPLEGFKLDWSAAgf 405
Cdd:NF033876 240 AATGgafATEADFLADFNANGAAFIkNYMDLTNADTGAIGGLDADGGPVLTAESVVPDTGSYpGEDPLSGFNVIWPTF-- 317
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1151997481 406 kPDEKKTFQLQTGSNAGEQSSFSIRGGTAERLGLAGVNVSANARGSIAITDKALKNIHEIRREI 469
Cdd:NF033876 318 -SGAGTTVQLQVGANAGQTIEISFGDMSAEALGLDDVDVSTDATSAIDIFDKALDYVSNQRAYL 380
|
|
| PRK08869 |
PRK08869 |
polar flagellin E; |
1-538 |
4.70e-53 |
|
polar flagellin E;
Pssm-ID: 236344 [Multi-domain] Cd Length: 376 Bit Score: 184.36 E-value: 4.70e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 1 MLFVNTNVSALKGMNFMSRVTERMNLSFEQLSSGSRINSAKDDAAGLQIANRLETQIIGTNQATRNIQDGISALQIADGA 80
Cdd:PRK08869 1 AVNVNTNVSAMTAQRNLNGATSALSQSMERLSSGKRINSAKDDAAGLQISNRLTTQIRGLDVAVRNANDGISIAQTAEGA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 81 MDEITNITQRMRQLAVQMSSNTLSQEDRDGAQLEIEELINAANGIAESANLGGdTPLLEGpdvNFtansdadifarvtgm 160
Cdd:PRK08869 81 MNETTNILQRMRDLSLQSANGSNSASDRQALQEEVTALNDELNRIAETTSFGG-TKLLNG---SF--------------- 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 161 meqaeanikahyglvgdGEDTFQmlisnhdgagnvvafVTSAAGDVISMTLdrddfNGSISNIDRiiehemvhavMGNQi 240
Cdd:PRK08869 142 -----------------GTKSFQ---------------IGANSGEAVSLDL-----KSMRSDAKI----------MGGV- 173
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 241 taampkwftegtaelihgaddrlvvdvagdpaalmagwnpSSAANSADYSRAYVAARMLHDDLKSAGHSGGMSALMQTMA 320
Cdd:PRK08869 174 ----------------------------------------SYDAEGGADKDWTVGAGNTDLNVSFDDKGGETQAITINAK 213
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 321 DGDTLDsglqkllgisqadfetrvanEGASYIesmdltNDDLGGIGALDSdamgtrnaedavgdafsyaeqplEGFKLDW 400
Cdd:PRK08869 214 AGDDIE--------------------ELATYI------NGQTDGVGASVS-----------------------EDGKLQL 244
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 401 SAAGFKPDEKKTFqlqTGSNAGEqssfsIRGGTAERLGLAGVNVS--ANARGSIAITDKALKNIHEIRREIAGTMAELES 478
Cdd:PRK08869 245 FAAGQKVSGGVSF---SGGLAAE-----LGLGNATAVTVDDLDIStvGGAQQAVAVIDAALKYVDSHRADLGAFQNRFTH 316
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 479 MQRNNTAMVINTSDAKSRIKDTDFAAATSELTRNQIIQQASSTILAQANQTPNIALSLLS 538
Cdd:PRK08869 317 AINNLQNISENLSASNSRIKDTDFAKETTELTKAQILQQAGTSILAQAKQAPQSALSLLQ 376
|
|
| FlgL |
COG1344 |
Flagellin and related hook-associated protein FlgL [Cell motility]; |
4-190 |
1.50e-35 |
|
Flagellin and related hook-associated protein FlgL [Cell motility];
Pssm-ID: 440955 [Multi-domain] Cd Length: 245 Bit Score: 133.07 E-value: 1.50e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 4 VNTNVSALKGMNFMSRVTERMNLSFEQLSSGSRINSAKDDAAGLQIANRLETQIIGTNQATRNIQDGISALQIADGAMDE 83
Cdd:COG1344 3 ISTNMSALNALRNLNRTQSDLAKLQEQLSSGKRINSASDDPAGAAIALRLRSQIRGLEQYQRNANDAISRLQTAEGALGE 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 84 ITNITQRMRQLAVQMSSNTLSQEDRDGAQLEIEELINAANGIAESANLGGdTPLLEG-----PDVNFTANSDADIFARVT 158
Cdd:COG1344 83 ITDILQRARELAVQAANGTLSDEDRAAIAAELEQLLDQLLSIANTTDFNG-RYLFAGtatdtPPFQVDYQGDAGQRTAAL 161
|
170 180 190
....*....|....*....|....*....|..
gi 1151997481 159 GMMEQAEANIKAHYGLVGDGEDTFQMLISNHD 190
Cdd:COG1344 162 GALDAALDNVSSARAELGARQNRLESAINNLS 193
|
|
| Flagellin_N |
pfam00669 |
Bacterial flagellin N-terminal helical region; Flagellins polymerize to form bacterial ... |
4-133 |
5.79e-29 |
|
Bacterial flagellin N-terminal helical region; Flagellins polymerize to form bacterial flagella. This family includes flagellins and hook associated protein 3. Structurally this family forms an extended helix that interacts with pfam00700.
Pssm-ID: 425809 [Multi-domain] Cd Length: 139 Bit Score: 111.67 E-value: 5.79e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 4 VNTNVSALKGMNFMSRVTERMNLSFEQLSSGSRINSAKDDAAGLQIANRLETQIIGTNQATRNIQDGISALQIADGAMDE 83
Cdd:pfam00669 1 INTNSAALAARSNLNKNQAELSKAQERLSTGLRINSALDDAAGLAISVSLRAQIAGLSQAVRNNSLGIGRLQTAQGALSE 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1151997481 84 ITNITQRMRQLAVQMSSNTLSQEDRDGAQLEIEELINAANGIAESANLGG 133
Cdd:pfam00669 81 VTDILQRMKELAVQASNGGNSDIDRASIQAEIQQLTDELNNIANTTSFNG 130
|
|
| PRK12802 |
PRK12802 |
flagellin; Provisional |
1-137 |
4.55e-28 |
|
flagellin; Provisional
Pssm-ID: 139237 [Multi-domain] Cd Length: 282 Bit Score: 113.43 E-value: 4.55e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 1 MLFVNTNVSALKGMNFMSRVTERMNLSFEQLSSGSRINSAKDDAAGLQIANRLETQIIGTNQATRNIQDGISALQIADGA 80
Cdd:PRK12802 2 ALTVNTNITSLTVQKNLSRASDALSTSMTRLSSGLKINSAKDDAAGLQIATRQTSQIRGQTQAIKNANDGISIAQTAEGA 81
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1151997481 81 MDEITNITQRMRQLAVQMSSNTLSQEDRDGAQLEIEELINAANGIAESANLGGDTPL 137
Cdd:PRK12802 82 LQESTNILQRMRELAVQSRNDSNDSTDRAALNKEFTTMLDEITRIATSTTLNGKNLL 138
|
|
| lat_flg_LafA_2 |
NF038071 |
lateral flagellin LafA; |
2-140 |
4.01e-25 |
|
lateral flagellin LafA;
Pssm-ID: 468331 [Multi-domain] Cd Length: 283 Bit Score: 104.92 E-value: 4.01e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 2 LFVNTNVSALKGMNFMSRVTERMNLSFEQLSSGSRINSAKDDAAGLQIANRLETQIIGTNQATRNIQDGISALQIADGAM 81
Cdd:NF038071 3 LSIHTNYASLVTQNQLNSTNKMLGTAMQRLGTGLRINSAADDAAGLQMATRLQAQSNGQKVGMRNAQDAISMMQTAEGAM 82
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 1151997481 82 DEITNITQRMRQLAVQMSSNTLSQEDRDGAQLEIEELINAANGIAESANLGGDTPLLEG 140
Cdd:NF038071 83 DEMTNITQRMKDLATQSANGTASAADRAAMDAEFKELSAELDNIMDNTTFGGQKLLKDG 141
|
|
| flagell_flgL |
TIGR02550 |
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated ... |
4-133 |
2.62e-18 |
|
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated proteins designated FlgL (or HAP3) encoded in bacterial flagellar operons. A N-terminal region of about 150 residues and a C-terminal region of about 85 residues are conserved. Members show considerable length heterogeneity between these two well-conserved terminal regions; the seed alignment 486 columns, 393 of which are represented in the model, while members of this family are from 287 to over 500 residues in length. This model distinguishes FlgL from the flagellin gene product FliC. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 274195 [Multi-domain] Cd Length: 306 Bit Score: 85.86 E-value: 2.62e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 4 VNTNVSALKGMNFMSRVTERMNLSFEQLSSGSRINSAKDDAAGLQIANRLETQIIGTNQATRNIQDGISALQIADGAMDE 83
Cdd:TIGR02550 2 VSTNMLYNNSLNSITNNQSRLAKLQQQLSSGKRINKPSDDPVAAAQALNLNQELAQLEQYQKNIDDAKNWLSQTETALSS 81
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1151997481 84 ITNITQRMRQLAVQMSSNTLSQEDRDGAQLEIEELINAANGIAESANLGG 133
Cdd:TIGR02550 82 VGDVLQRARELAVQAANGTLSDDDRKAIAKEIKQLLDQLVNLANTKDGNG 131
|
|
| PRK12802 |
PRK12802 |
flagellin; Provisional |
412-537 |
2.83e-14 |
|
flagellin; Provisional
Pssm-ID: 139237 [Multi-domain] Cd Length: 282 Bit Score: 73.37 E-value: 2.83e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 412 TFQLQTGSNAGEQSSFSIR------------GGTAERLGLAGVNVSANARGSIAITDKALKNIHEIRREIAGTMAELESM 479
Cdd:PRK12802 144 TMTFQVGANTGQSNQITFGlsasfdatglgvGSGTLITGADSAAAETNAQAAITAIDAALQTINTTRADLGAAQNRLQST 223
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1151997481 480 QRNNTAMVINTSDAKSRIKDTDFAAATSELTRNQIIQQASSTILAQANQTPNIALSLL 537
Cdd:PRK12802 224 ISNLQNINENASAARGRVQDTDFAAETAQLTKQQTLQQASTSVLAQANQLPSAVLKLL 281
|
|
| Flagellin_C |
pfam00700 |
Bacterial flagellin C-terminal helical region; Flagellins polymerize to form bacterial ... |
452-537 |
5.04e-13 |
|
Bacterial flagellin C-terminal helical region; Flagellins polymerize to form bacterial flagella. There is some similarity between this family and pfam00669, particularly the motif NRFXSXIXXL. It has been suggested that these two regions associate and this is shown to be correct as structurally this family forms an extended helix that interacts with pfam00700.
Pssm-ID: 425827 [Multi-domain] Cd Length: 86 Bit Score: 64.66 E-value: 5.04e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 452 IAITDKALKNIHEIRREIAGTMAELESMQRNNTAMVINTSDAKSRIKDTDFAAATSELTRNQIIQQASSTILAQANQTPN 531
Cdd:pfam00700 1 LDLIDEAITDLDSVRADLGAVQNRLESATTNLNNQQDNLKAAISRIEDVDPAEESTRMTKLQIQIQASYSLLSQANQLPQ 80
|
....*.
gi 1151997481 532 IALSLL 537
Cdd:pfam00700 81 SLLNLL 86
|
|
| FlgL |
COG1344 |
Flagellin and related hook-associated protein FlgL [Cell motility]; |
445-538 |
5.62e-13 |
|
Flagellin and related hook-associated protein FlgL [Cell motility];
Pssm-ID: 440955 [Multi-domain] Cd Length: 245 Bit Score: 68.74 E-value: 5.62e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 445 SANARGSIAITDKALKNIHEIRREIAGTMAELESMQRNNTAMVINTSDAKSRIKDTDFAAATSELTRNQIIQQASSTILA 524
Cdd:COG1344 154 AGQRTAALGALDAALDNVSSARAELGARQNRLESAINNLSDLSENLTAALSRLEDADMAEAITRLTKLQTLLQAALAALA 233
|
90
....*....|....
gi 1151997481 525 QANQTPniALSLLS 538
Cdd:COG1344 234 QANQLS--LLDLLR 245
|
|
| flagell_flgL |
TIGR02550 |
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated ... |
456-537 |
1.10e-04 |
|
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated proteins designated FlgL (or HAP3) encoded in bacterial flagellar operons. A N-terminal region of about 150 residues and a C-terminal region of about 85 residues are conserved. Members show considerable length heterogeneity between these two well-conserved terminal regions; the seed alignment 486 columns, 393 of which are represented in the model, while members of this family are from 287 to over 500 residues in length. This model distinguishes FlgL from the flagellin gene product FliC. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 274195 [Multi-domain] Cd Length: 306 Bit Score: 44.26 E-value: 1.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 456 DKALKNIHEIRREIAGTMAELESMQRNNTAMVINTSDAKSRIKDTDFAAATSELTRNQIIQQASSTILAQANQtpniaLS 535
Cdd:TIGR02550 227 DKALDNVLSARAEVGARLNRLENLNSRLSEQKLQLTEQLSDLEDVDLAEAISDLNMQQAALQAALKTFAKIQQ-----LS 301
|
..
gi 1151997481 536 LL 537
Cdd:TIGR02550 302 LF 303
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| flagella_HExxH |
NF033876 |
flagellinolysin; Flagellinolysin is a variant form of bacterial flagellin in with the normally ... |
112-469 |
2.84e-100 |
|
flagellinolysin; Flagellinolysin is a variant form of bacterial flagellin in with the normally hypervariable central region contains an M9 (MEROPS classification) family metalloprotease domain, with its signature HExxH motif. The founding member of the family, from the pathogen Clostridium haemolyticum, shows EDTA-sensitive metalloprotease activity. The large count of flagellin subunits in a complete flagellum means the capacity of flagellinolysin to perform as a protease may have implications for host-pathogen relationships.
Pssm-ID: 468217 Cd Length: 380 Bit Score: 307.66 E-value: 2.84e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 112 QLEIEELINAANGIAESANLGGDTPLLEGPDVNFTANSDADIFARV-TGMMEQAEANIKAHYGLVGDGeDTFQMLISNHD 190
Cdd:NF033876 2 QKEINQLKQEIDRIAETTEFNGKKLFDQGASVGSADPDKQAILDGLkSGWLENAEDLIKEYYGLTADG-ADLTVNLEYTD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 191 GAGNVVAFV-----TSAAGDVISMTLDRDDF------NGSISNI--DRIIEHEMVHAVMGNQIT-AAMPKWFTEGTAELI 256
Cdd:NF033876 81 GAGGTLAYVssgsgGGGKGGNLTLTIDMADFspanlpNGGTAPQylDRTIAHEMVHAVMGRTMNfSSLPTWFIEGTAEFI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 257 HGADDRLVVDVAG--DPAALMAGW--NPSSAANSADYSRAYVAARMLHDDLKSAGhSGGMSALMQTMAD--GDTLDSGLQ 330
Cdd:NF033876 161 HGADERLAADLAGgtSDAAGVAALfnGGAWTSTSADYSAGYAAVRYLHDQIKAAG-GGGIKDIMQYLKAnaGSTLDQALA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 331 KLLG---ISQADFETRVANEGASYI-ESMDLTNDDLGGIGALDSDAMGTRNAEDAVGDAFSY-AEQPLEGFKLDWSAAgf 405
Cdd:NF033876 240 AATGgafATEADFLADFNANGAAFIkNYMDLTNADTGAIGGLDADGGPVLTAESVVPDTGSYpGEDPLSGFNVIWPTF-- 317
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1151997481 406 kPDEKKTFQLQTGSNAGEQSSFSIRGGTAERLGLAGVNVSANARGSIAITDKALKNIHEIRREI 469
Cdd:NF033876 318 -SGAGTTVQLQVGANAGQTIEISFGDMSAEALGLDDVDVSTDATSAIDIFDKALDYVSNQRAYL 380
|
|
| PRK08869 |
PRK08869 |
polar flagellin E; |
1-538 |
4.70e-53 |
|
polar flagellin E;
Pssm-ID: 236344 [Multi-domain] Cd Length: 376 Bit Score: 184.36 E-value: 4.70e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 1 MLFVNTNVSALKGMNFMSRVTERMNLSFEQLSSGSRINSAKDDAAGLQIANRLETQIIGTNQATRNIQDGISALQIADGA 80
Cdd:PRK08869 1 AVNVNTNVSAMTAQRNLNGATSALSQSMERLSSGKRINSAKDDAAGLQISNRLTTQIRGLDVAVRNANDGISIAQTAEGA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 81 MDEITNITQRMRQLAVQMSSNTLSQEDRDGAQLEIEELINAANGIAESANLGGdTPLLEGpdvNFtansdadifarvtgm 160
Cdd:PRK08869 81 MNETTNILQRMRDLSLQSANGSNSASDRQALQEEVTALNDELNRIAETTSFGG-TKLLNG---SF--------------- 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 161 meqaeanikahyglvgdGEDTFQmlisnhdgagnvvafVTSAAGDVISMTLdrddfNGSISNIDRiiehemvhavMGNQi 240
Cdd:PRK08869 142 -----------------GTKSFQ---------------IGANSGEAVSLDL-----KSMRSDAKI----------MGGV- 173
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 241 taampkwftegtaelihgaddrlvvdvagdpaalmagwnpSSAANSADYSRAYVAARMLHDDLKSAGHSGGMSALMQTMA 320
Cdd:PRK08869 174 ----------------------------------------SYDAEGGADKDWTVGAGNTDLNVSFDDKGGETQAITINAK 213
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 321 DGDTLDsglqkllgisqadfetrvanEGASYIesmdltNDDLGGIGALDSdamgtrnaedavgdafsyaeqplEGFKLDW 400
Cdd:PRK08869 214 AGDDIE--------------------ELATYI------NGQTDGVGASVS-----------------------EDGKLQL 244
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 401 SAAGFKPDEKKTFqlqTGSNAGEqssfsIRGGTAERLGLAGVNVS--ANARGSIAITDKALKNIHEIRREIAGTMAELES 478
Cdd:PRK08869 245 FAAGQKVSGGVSF---SGGLAAE-----LGLGNATAVTVDDLDIStvGGAQQAVAVIDAALKYVDSHRADLGAFQNRFTH 316
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 479 MQRNNTAMVINTSDAKSRIKDTDFAAATSELTRNQIIQQASSTILAQANQTPNIALSLLS 538
Cdd:PRK08869 317 AINNLQNISENLSASNSRIKDTDFAKETTELTKAQILQQAGTSILAQAKQAPQSALSLLQ 376
|
|
| FlgL |
COG1344 |
Flagellin and related hook-associated protein FlgL [Cell motility]; |
4-190 |
1.50e-35 |
|
Flagellin and related hook-associated protein FlgL [Cell motility];
Pssm-ID: 440955 [Multi-domain] Cd Length: 245 Bit Score: 133.07 E-value: 1.50e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 4 VNTNVSALKGMNFMSRVTERMNLSFEQLSSGSRINSAKDDAAGLQIANRLETQIIGTNQATRNIQDGISALQIADGAMDE 83
Cdd:COG1344 3 ISTNMSALNALRNLNRTQSDLAKLQEQLSSGKRINSASDDPAGAAIALRLRSQIRGLEQYQRNANDAISRLQTAEGALGE 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 84 ITNITQRMRQLAVQMSSNTLSQEDRDGAQLEIEELINAANGIAESANLGGdTPLLEG-----PDVNFTANSDADIFARVT 158
Cdd:COG1344 83 ITDILQRARELAVQAANGTLSDEDRAAIAAELEQLLDQLLSIANTTDFNG-RYLFAGtatdtPPFQVDYQGDAGQRTAAL 161
|
170 180 190
....*....|....*....|....*....|..
gi 1151997481 159 GMMEQAEANIKAHYGLVGDGEDTFQMLISNHD 190
Cdd:COG1344 162 GALDAALDNVSSARAELGARQNRLESAINNLS 193
|
|
| PRK12806 |
PRK12806 |
flagellin; Provisional |
4-537 |
1.31e-34 |
|
flagellin; Provisional
Pssm-ID: 183761 [Multi-domain] Cd Length: 475 Bit Score: 135.97 E-value: 1.31e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 4 VNTNVSALKGMNFMSRVTERMNLSFEQLSSGSRINSAKDDAAGLQIANRLETQIIGTNQATRNIQDGISALQIADGAMDE 83
Cdd:PRK12806 5 INTNVASLTAQRNLGVSGNMMQTSIQRLSSGLRINSAKDDAAGLAISQRMTAQIRGMNQAVRNANDGISLAQVAEGAMQE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 84 ITNITQRMRQLAVQMSSNTLSQEDRDGAQLEIEELINAANGIAESANLGGDTPL---LEGPDVNFTANSDADI-FARVTG 159
Cdd:PRK12806 85 TTNILQRMRELSVQAANSTNNSSDRASIQSEISQLKSELERIAQNTEFNGQRILdgsFSGASFQVGANSNQTInFSIGSI 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 160 MMEQAEANIKAHYGLVGDGEDTfqmLISNHDGAGNVVAFVTSAAGDVISMTLDRDDFNGSISNIDriiehemVHAVMGNQ 239
Cdd:PRK12806 165 KASSIGGIATATGTEVAGAAAT---DITIAIGGGAATSINSSANFTGALNGQDATSAYAKAAAIN-------DAGIGGLS 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 240 ITAAMPKWFTEGTAELIHGADDRLVVdvagDPAALMAGWNPSSAANSADysrayvaarmLHDDLKSAGHSGGMSAlmqtm 319
Cdd:PRK12806 235 VTASTSGTQAVGAIGGTAGDTYNLTI----NGVAIYTNLDVATALTNSD----------LRDAINGVSNQTGVVA----- 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 320 adgdTLDSGlqkllgisqadfetrvanegasyieSMDLTNDDLGGIgALDSDAMGTRNAEDAVGDAFSYAEQPLEGfkld 399
Cdd:PRK12806 296 ----SLNGG-------------------------NMTLTAADGRNI-TVTESGTGFTAGTDGLTVTGGAFDGALRG---- 341
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 400 wsaaGFKPDEKKTFQLQTG-SNAGEQSSFsirggTAERLGLAGVNVS--ANARGSIAITDKALKNIHEIRREIAGTMAEL 476
Cdd:PRK12806 342 ----TLSISAVDTIAIGGTvANIGLSANI-----SKDTVGIDSLDVStaSGAQTAIKRIDAALNSVNSNRANMGALQNRF 412
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1151997481 477 ESMQRNNTAMVINTSDAKSRIKDTDFAAATSELTRNQIIQQASSTILAQANQTPNIALSLL 537
Cdd:PRK12806 413 ESTIANLQNVSDNLSAARSRIQDADYAAEMASLTKNQILQQAGTAMLAQANSLPQSVLSLL 473
|
|
| PRK06819 |
PRK06819 |
FliC/FljB family flagellin; |
4-537 |
1.46e-31 |
|
FliC/FljB family flagellin;
Pssm-ID: 235867 [Multi-domain] Cd Length: 376 Bit Score: 125.66 E-value: 1.46e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 4 VNTNVSALKGMNFMSRVTERMNLSFEQLSSGSRINSAKDDAAGLQIANRLETQIIGTNQATRNIQDGISALQIADGAMDE 83
Cdd:PRK06819 5 INTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISIAQTTEGALNE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 84 ITNITQRMRQLAVQMSSNTLSQEDRDGAQLEIEELINAANGIAESANLGGDTPLLEGPDVNFtansdadifarvtgmmeQ 163
Cdd:PRK06819 85 INNNLQRVRELTVQAQNGSNSSSDLDSIQDEISQRLAEIDRVSDQTQFNGVKVLAEDTTMSI-----------------Q 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 164 AEANikahyglvgDGEdtfqmlisnhdgagnvvafvtsaagdVISMTLDRDDfngsisnidriiehemvhavmgnqitaa 243
Cdd:PRK06819 148 VGAN---------DGE--------------------------TIDINLQKID---------------------------- 164
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 244 mpkwftegtaelihgaddrlvvdvagdpaalmagwnpSSAANSADYSRAyvaarmlhddlksaghsgGMSALMQTMADGD 323
Cdd:PRK06819 165 -------------------------------------SKSLGLGSFSVS------------------GVSGALTSLTFTD 189
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 324 TLDSGLQKLLGiSQADFETRVANEGASYiesmDLTNDDlgGIGALDSDAMGTRNAEDAVGDAFSYAEQPLEGFKLdwsaa 403
Cdd:PRK06819 190 TALDTSVTGVT-TTTALDFSDISTFAKG----ATVHGI--GDVGTDGAYADGYVIRTTDGKQYKGEVDATNGKVT----- 257
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 404 gfkpdekktfqlqtgsnAGEQSSFSIRGGTAERLGLAGVNVSANARGS-IAITDKALKNIHEIRREIAGTMAELESMQRN 482
Cdd:PRK06819 258 -----------------FADDANGDPITDATKLEAAAQFSPAGKATASpLETLDDALKQVDGLRSSLGAVQNRFESTVTN 320
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*
gi 1151997481 483 NTAMVINTSDAKSRIKDTDFAAATSELTRNQIIQQASSTILAQANQTPNIALSLL 537
Cdd:PRK06819 321 LNNTVTNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQANQVPQTVLSLL 375
|
|
| PRK08026 |
PRK08026 |
FliC/FljB family flagellin; |
4-537 |
5.62e-29 |
|
FliC/FljB family flagellin;
Pssm-ID: 236140 [Multi-domain] Cd Length: 529 Bit Score: 120.62 E-value: 5.62e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 4 VNTNVSALKGMNFMSRVTERMNLSFEQLSSGSRINSAKDDAAGLQIANRLETQIIGTNQATRNIQDGISALQIADGAMDE 83
Cdd:PRK08026 5 INTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGALSE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 84 ITNITQRMRQLAVQMSSNTLSQEDRDGAQLEIEELIN-----------------AANG---IAESANLG----------- 132
Cdd:PRK08026 85 INNNLQRVRELTVQAATGTNSQSDLDSIQDEIKSRLDeidrvsgqtqfngvnvlAKDGsmkIQVGANDGetitidlkkid 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 133 GDTPLLEGPDVN------FTANSDADIFARVTGMMEQAEANIKAHYGlVGDGEDTFQMLisnhdGAGNVVAFvTSAAGDV 206
Cdd:PRK08026 165 SDTLGLDGFNVNgkgtvaNTAATVSDLTAAGATLDTTGLYDVKTKNA-ALTTADALAKL-----GDGDKVTA-TATGGDY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 207 ismTLDRDDFNGSISNIDRIIEHEMVHAVMGNQITAAMPKWFTEGTAELIHGADDRLVVDVAGDPAAlmagwNPSSAANS 286
Cdd:PRK08026 238 ---TYNAKSGKYQAADLAATLTPDVGGTAGASYTIKDGTYEVNVDSDGKITLGGSALYIDATGNLTT-----NNAGAATK 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 287 ADYSRAYVAARMLHDDLKSAGHSGGMsalmqTMADGDTLdsglqKLLGISQADFETRVANEGASYIESMDLTNDDLGGIG 366
Cdd:PRK08026 310 ATLDALKKTASEGAATAKAALAAAGV-----TVADGVTA-----KTVKMSYTDKNGKVIDGGYAVKTGDDYYAADYDEIT 379
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 367 ALDSDAMGTRNAEDAVgdafsyaeqplegfkldwsaagfkpdeKKTFQLQTGSNAGEQSSFSIRGGTAERLGLAGVNVSA 446
Cdd:PRK08026 380 GAISATTTYYTAKDGT---------------------------TKTAANKLGGADGKTEVVTIDGKTYVASDGKQTTLAE 432
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 447 NARGS----IAITDKALKNIHEIRREIAGTMAELESMQRNNTAMVINTSDAKSRIKDTDFAAATSELTRNQIIQQASSTI 522
Cdd:PRK08026 433 AAATTtenpLAALDAAIASIDKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSV 512
|
570
....*....|....*
gi 1151997481 523 LAQANQTPNIALSLL 537
Cdd:PRK08026 513 LAKANQVPQQVLSLL 527
|
|
| Flagellin_N |
pfam00669 |
Bacterial flagellin N-terminal helical region; Flagellins polymerize to form bacterial ... |
4-133 |
5.79e-29 |
|
Bacterial flagellin N-terminal helical region; Flagellins polymerize to form bacterial flagella. This family includes flagellins and hook associated protein 3. Structurally this family forms an extended helix that interacts with pfam00700.
Pssm-ID: 425809 [Multi-domain] Cd Length: 139 Bit Score: 111.67 E-value: 5.79e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 4 VNTNVSALKGMNFMSRVTERMNLSFEQLSSGSRINSAKDDAAGLQIANRLETQIIGTNQATRNIQDGISALQIADGAMDE 83
Cdd:pfam00669 1 INTNSAALAARSNLNKNQAELSKAQERLSTGLRINSALDDAAGLAISVSLRAQIAGLSQAVRNNSLGIGRLQTAQGALSE 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1151997481 84 ITNITQRMRQLAVQMSSNTLSQEDRDGAQLEIEELINAANGIAESANLGG 133
Cdd:pfam00669 81 VTDILQRMKELAVQASNGGNSDIDRASIQAEIQQLTDELNNIANTTSFNG 130
|
|
| PRK12802 |
PRK12802 |
flagellin; Provisional |
1-137 |
4.55e-28 |
|
flagellin; Provisional
Pssm-ID: 139237 [Multi-domain] Cd Length: 282 Bit Score: 113.43 E-value: 4.55e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 1 MLFVNTNVSALKGMNFMSRVTERMNLSFEQLSSGSRINSAKDDAAGLQIANRLETQIIGTNQATRNIQDGISALQIADGA 80
Cdd:PRK12802 2 ALTVNTNITSLTVQKNLSRASDALSTSMTRLSSGLKINSAKDDAAGLQIATRQTSQIRGQTQAIKNANDGISIAQTAEGA 81
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1151997481 81 MDEITNITQRMRQLAVQMSSNTLSQEDRDGAQLEIEELINAANGIAESANLGGDTPL 137
Cdd:PRK12802 82 LQESTNILQRMRELAVQSRNDSNDSTDRAALNKEFTTMLDEITRIATSTTLNGKNLL 138
|
|
| PRK12807 |
PRK12807 |
flagellin; Provisional |
4-252 |
2.87e-25 |
|
flagellin; Provisional
Pssm-ID: 171737 [Multi-domain] Cd Length: 287 Bit Score: 105.67 E-value: 2.87e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 4 VNTNVSALKGMNFMSRVTERMNLSFEQLSSGSRINSAKDDAAGLQIANRLETQIIGTNQATRNIQDGISALQIADGAMDE 83
Cdd:PRK12807 3 INTNINSMRTQEYMRQNQDKMNVSMNRLSSGKRINSAADDAAGLAIATRMRARQSGLEKASQNTQDGMSLIRTAESAMNS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 84 ITNITQRMRQLAVQMSSNTLSQEDRDGAQLEIEELINAANGIAESANLGGD----TPLLEGPDVNFTANSDADIFARVTG 159
Cdd:PRK12807 83 VSNILTRMRDIAVQSSNGTNTAENQSALQKEFAELQEQIDYIAKNTEFNDKnllaGTGAVTIGSTSISGAEISIETLDSS 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 160 MME-QAEANIK----AHYGLVGDGEDTFQMLISNHDGAGNVV-AFVTSAAGD--VISMTLDRDDFngsisNIDRIIEHEM 231
Cdd:PRK12807 163 ATNqQITIKLAnttaEKLGIDATTSNISISGAASALAAISALnTALNTVAGNraTLGATLNRLDR-----NVENLNNQAT 237
|
250 260
....*....|....*....|..
gi 1151997481 232 VHAVMGNQIT-AAMPKWFTEGT 252
Cdd:PRK12807 238 NMASAASQIEdADMAKEMSEMT 259
|
|
| lat_flg_LafA_2 |
NF038071 |
lateral flagellin LafA; |
2-140 |
4.01e-25 |
|
lateral flagellin LafA;
Pssm-ID: 468331 [Multi-domain] Cd Length: 283 Bit Score: 104.92 E-value: 4.01e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 2 LFVNTNVSALKGMNFMSRVTERMNLSFEQLSSGSRINSAKDDAAGLQIANRLETQIIGTNQATRNIQDGISALQIADGAM 81
Cdd:NF038071 3 LSIHTNYASLVTQNQLNSTNKMLGTAMQRLGTGLRINSAADDAAGLQMATRLQAQSNGQKVGMRNAQDAISMMQTAEGAM 82
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 1151997481 82 DEITNITQRMRQLAVQMSSNTLSQEDRDGAQLEIEELINAANGIAESANLGGDTPLLEG 140
Cdd:NF038071 83 DEMTNITQRMKDLATQSANGTASAADRAAMDAEFKELSAELDNIMDNTTFGGQKLLKDG 141
|
|
| PRK12584 |
PRK12584 |
flagellin A; Reviewed |
4-538 |
2.84e-23 |
|
flagellin A; Reviewed
Pssm-ID: 237146 [Multi-domain] Cd Length: 510 Bit Score: 103.06 E-value: 2.84e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 4 VNTNVSALKGMNFMSRVTERMNLSFEQLSSGSRINSAKDDAAGLQIANRLETQIIGTNQATRNIQDGISALQIADGAMDE 83
Cdd:PRK12584 5 VNTNINALNAHVQSALTQNALKTSLEKLSSGLRINKAADDASGMTIADSLRSQASSLGQAIANTNDGMGIIQVADKAMDE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 84 ITNITQRMRQLAVQMSSNTLSQEDRDGAQLEIEELINAANGIAESANLGGDTpLLEGPDVN----FTANSDADIFARV-- 157
Cdd:PRK12584 85 QLKILDTIKVKATQAAQDGQTTESRKAIQSDIVRLIQGLDNIGNTTTYNGQA-LLSGQFTNkefqVGAYSNQSIKASIgs 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 158 --TGMMEQAEANIKAHYGLVGDGEDTFQMLISNHDGAGNVVAFVTSAA------GDVISMTLDRDDFNGSISnidriIEH 229
Cdd:PRK12584 164 ttSDKIGQVRIATGALITASGDISLTFKQVDGVNDVTLESVKVSSSAGtgigvlAEVINKNSDRTGVKAYAS-----VIT 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 230 EMVHAVMGNQITAAMPKWFTEGTAELI--HGADDRLVvdvagdpAALMAGWNPSSAANSADySRAYVAARMLHD---DLK 304
Cdd:PRK12584 239 TSDVAVQSGSLSNLTLNGIHIGNIADIkkNDSDGRLV-------AAINAVTSETGVEAYTD-QKGRLNLRSIDGrgiEIK 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 305 SAGHSGGMSAlMQTMADGDTLDSGLQKLLGISQADFETRVAN-EGASYIESMDLTNDDLGGIGAldsdAMGTRNAEDAVG 383
Cdd:PRK12584 311 TDSVSNGPSA-LTMVNGGQDLTKGSTNYGRLSLTRLDARDINvVSASDSQHLGFSAIGFGESQV----AETTVNLRDVTG 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 384 DafsyaeqplegfkldwsaagfkpdekktFQLQTGSNAGEQSSFSIRGGTAErLGlAGVNVSANARGSIAITDKALKNIH 463
Cdd:PRK12584 386 N----------------------------FNANVKSASGANYNAVIASGNQS-LG-SGVTTLRGAMVVMDIAESAMKMLD 435
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1151997481 464 EIRREIAGTMAELESMQRNNTAMVINTSDAKSRIKDTDFAAATSELTRNQIIQQASSTILAQANQTPNIALSLLS 538
Cdd:PRK12584 436 KVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESANFNKNNILAQSGSYAMSQANTVQQNILRLLT 510
|
|
| PRK12804 |
PRK12804 |
flagellin; Provisional |
4-223 |
1.61e-22 |
|
flagellin; Provisional
Pssm-ID: 183759 [Multi-domain] Cd Length: 301 Bit Score: 98.15 E-value: 1.61e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 4 VNTNVSALKGMNFMSRVTERMNLSFEQLSSGSRINSAKDDAAGLQIANRLETQIIGTNQATRNIQDGISALQIADGAMDE 83
Cdd:PRK12804 3 INHNIAALNTLNRLSANNGASQKNMEKLSSGLKINRAGDDAAGLAISEKMRGQIRGLEMASKNAQDGISLIQTAEGALTE 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 84 ITNITQRMRQLAVQmSSNTLSQEDRD--GAQLEIEELINAANGIAESANLGGDTpLLEG--PDVNFTANSDADIFARVTG 159
Cdd:PRK12804 83 THSILQRVRELVVQ-AGNTGTQDGTDlgAIQDEIKALVDEIDGISDRTEFNGKK-LLDGtfKPAAPAAGTKSLTFQIGAN 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1151997481 160 MMEQAEANIKAHYGLVGDGEDTFQMLISNHDGAG-NVVAFVTSAAGDVISMTLDRDDFNGSISNI 223
Cdd:PRK12804 161 AAQQLSVNIEAMSADALGVKDTDGTLVTGKSVSDiDVTKFANAAAAADGGFDDQLKIVDGAIKQV 225
|
|
| PRK12803 |
PRK12803 |
flagellin; Provisional |
2-129 |
1.07e-19 |
|
flagellin; Provisional
Pssm-ID: 183758 [Multi-domain] Cd Length: 335 Bit Score: 90.25 E-value: 1.07e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 2 LFVNTNVSALKGMNFMSRVTERMNLSFEQLSSGSRINSAKDDAAGLQIANRLETQIIGTNQATRNIQDGISALQIADGAM 81
Cdd:PRK12803 1 MIINHNTSAINASRNNSINAANLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQASRNTSKAINFIQTTEGNL 80
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 1151997481 82 DEITNITQRMRQLAVQMSSNTLSQEDRDGAQLEIEELINAANGIAESA 129
Cdd:PRK12803 81 NEVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQA 128
|
|
| PRK12805 |
PRK12805 |
FliC/FljB family flagellin; |
4-130 |
1.41e-19 |
|
FliC/FljB family flagellin;
Pssm-ID: 183760 [Multi-domain] Cd Length: 287 Bit Score: 89.16 E-value: 1.41e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 4 VNTNVSALKGMNFMSRVTERMNLSFEQLSSGSRINSAKDDAAGLQIANRLETQIIGTNQATRNIQDGISALQIADGAMDE 83
Cdd:PRK12805 3 VNTNIISLKTQEYLRKNNEGMTQAQERLASGKRINSSLDDAAGLAVVTRMNVKSTGLDAASKNSSMGIDLLQTADSALSS 82
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 1151997481 84 ITNITQRMRQLAVQMSSNTLSQEDRDGAQLEIEELINAANGIAESAN 130
Cdd:PRK12805 83 MSSILQRMRQLAVQSSNGSFSDEDRKQYTAEFGSLIKELDHVADTTN 129
|
|
| PRK12808 |
PRK12808 |
flagellin; Provisional |
4-537 |
5.56e-19 |
|
flagellin; Provisional
Pssm-ID: 237212 [Multi-domain] Cd Length: 476 Bit Score: 89.63 E-value: 5.56e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 4 VNTNVSALKGMNFMSRVTERMNLSFEQLSSGSRINSAKDDAAGLQIANRLETQIIGTNQATRNIQDGISALQIADGAMDE 83
Cdd:PRK12808 3 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGMSLIRTADSAMNS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 84 ITNITQRMRQLAVQMSSNTLSQEDRDGAQLEIEELINAANGIAESANLgGDTPLLEGpdvnftaNSDADIfarvtgmmeq 163
Cdd:PRK12808 83 VSNILLRMRDIANQSANGTNTDKNQAALQKEFAELQKQITYIADNTQF-NDKNLLNS-------NSSINI---------- 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 164 aeanikahyglvgdgedtfQMLISnHDGAGNVVAFVTSAAGDVISMTldrddfNGSI-SNIDRIIEHEMVHAVMGNQITA 242
Cdd:PRK12808 145 -------------------QTLDS-SDGDKQIGIDLKSATLEALGIN------DLSIgANTDIEAVSTKIAALDKNTIAK 198
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 243 AmpkwFTEGTAELIHGADDRLVVDVAGDPAALMAGWNPSSAANSADYSRAYVAARMLHDDLKSAGHSGGMSALMQTMADG 322
Cdd:PRK12808 199 A----TVEAKAAFDKAKDDTKAEDSNILDAAADGFKDGKADDAAKDVEAIKTALSAFTGAATLEEAEAAKTAFEVAQKDL 274
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 323 DTLDSGLQKLLGISQADFETRVANEGASyiesmdltnDDLGGIGALDSDAMGTRNAEDAvgdAFSYAEQPLEGFKLDWSA 402
Cdd:PRK12808 275 VDTYTKKAALTKDAVADLDTAKTTSTRS---------KAAKDLVAAYDKAKSGAKPNDV---AKAYLEAKMAYEKDNNAI 342
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 403 AGFKPDEKKTFQLQTGSNAGEQSSFSIRggTAERLGLAGVNVSANARGSIAITDKALKNIHEIRREIAGTMAELESMQRN 482
Cdd:PRK12808 343 DGKSKLEAADDALEKDAIKTDASKVLVP--KLEAAKKATTNSKADSLDAVKAIDEALKTVADNRATLGATLNRLDFNVNN 420
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*
gi 1151997481 483 NTAMVINTSDAKSRIKDTDFAAATSELTRNQIIQQASSTILAQANQTPNIALSLL 537
Cdd:PRK12808 421 LKSQSSSMASAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLL 475
|
|
| PRK08411 |
PRK08411 |
flagellin; Reviewed |
4-537 |
2.18e-18 |
|
flagellin; Reviewed
Pssm-ID: 236260 [Multi-domain] Cd Length: 572 Bit Score: 88.51 E-value: 2.18e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 4 VNTNVSALKGMNFMSRVTERMNLSFEQLSSGSRINSAKDDAAGLQIANRLETQIIGTNQATRNIQDGISALQIADGAMDE 83
Cdd:PRK08411 5 INTNVAALNAKANSDLNAKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQAISNGNDALGILQTADKAMDE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 84 ITNITQRMRQLAVQMSSNTLSQEDRDGAQLEIEELINAANGIAESANLGGDTpLLEGPDVN----FTANSDADIFARVTG 159
Cdd:PRK08411 85 QLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDNIANTTSFNGKQ-LLSGNFTNqefqIGASSNQTVKATIGA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 160 MMEQAEANIKAHYGLVGDGEDTFQMLISNHDGAGNV----VAFVTS------AAGDVISMTLDRDDFNGSISnidriIEH 229
Cdd:PRK08411 164 TQSSKIGVTRFETGARITTSGVVQLTIKNYNGIDDFkfqnVVISTSvgtglgALAEEINKNADKTGVRATFD-----VET 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 230 EMVHAVMGNQITAAMP-KWFTEGTAELIHGADDRLVVdvagdpAALMAGWNPSSAANSADYSRAYVAARMLHDDLKSAGH 308
Cdd:PRK08411 239 TGVAAIKAGTTSDDFAiNGVTIGKVEYKDGDGNGALV------AAINSVKDTTGVEASIDENGKLVLTSRDGRGIKIDGD 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 309 SGGMSALMQTMADG------------DTLDS-------GLQKLLGISQADFETRVA--NEGASYIESMDLTNDDLGGIGA 367
Cdd:PRK08411 313 IGGGSGILANMKENygrlslvkndgkDILISgtnlsfaGMGATDMISQASVSLRESkgQIDANVADAMGFNSYKGGVMIQ 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 368 LDSDAMGTRNAEDA---------VGDAFSYAEQPLEGFKLDWSAAGFKPDEKKTFQLQTGSNAGEQSSFSIRGGTAERLG 438
Cdd:PRK08411 393 GFSSVSAFMSSEGSgfsqgsgysVGSGKNYSVGLSSGIQISSASAMSTVYVVSAGSGFSSGSNLSQFAAMKTTAANVKDE 472
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 439 LAGVNVSANARGSIAITDKALKNIHEIRREIAGTMAELESMQRNNTAMVINTSDAKSRIKDTDFAAATSELTRNQIIQQA 518
Cdd:PRK08411 473 TAGVTTLKGAMAVMDIAETAITNLDQIRADIGSVQNQVTSTINNITVTQVNVKAAESQIRDVDFAAESANYSKANILAQS 552
|
570
....*....|....*....
gi 1151997481 519 SSTILAQANQTPNIALSLL 537
Cdd:PRK08411 553 GSYAMAQANAVQQNVLRLL 571
|
|
| flagell_flgL |
TIGR02550 |
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated ... |
4-133 |
2.62e-18 |
|
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated proteins designated FlgL (or HAP3) encoded in bacterial flagellar operons. A N-terminal region of about 150 residues and a C-terminal region of about 85 residues are conserved. Members show considerable length heterogeneity between these two well-conserved terminal regions; the seed alignment 486 columns, 393 of which are represented in the model, while members of this family are from 287 to over 500 residues in length. This model distinguishes FlgL from the flagellin gene product FliC. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 274195 [Multi-domain] Cd Length: 306 Bit Score: 85.86 E-value: 2.62e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 4 VNTNVSALKGMNFMSRVTERMNLSFEQLSSGSRINSAKDDAAGLQIANRLETQIIGTNQATRNIQDGISALQIADGAMDE 83
Cdd:TIGR02550 2 VSTNMLYNNSLNSITNNQSRLAKLQQQLSSGKRINKPSDDPVAAAQALNLNQELAQLEQYQKNIDDAKNWLSQTETALSS 81
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 1151997481 84 ITNITQRMRQLAVQMSSNTLSQEDRDGAQLEIEELINAANGIAESANLGG 133
Cdd:TIGR02550 82 VGDVLQRARELAVQAANGTLSDDDRKAIAKEIKQLLDQLVNLANTKDGNG 131
|
|
| PRK13589 |
PRK13589 |
flagellin A; |
4-537 |
8.04e-16 |
|
flagellin A;
Pssm-ID: 172158 [Multi-domain] Cd Length: 576 Bit Score: 80.46 E-value: 8.04e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 4 VNTNVSALKGMNFMSRVTERMNLSFEQLSSGSRINSAKDDAAGLQIANRLETQIIGTNQATRNIQDGISALQIADGAMDE 83
Cdd:PRK13589 5 INTNIGALNAHANSVVNSRELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQAINNGNDAIGILQTADKAMDE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 84 ITNITQRMRQLAVQMSSNTLSQEDRDGAQLEIEELINAANGIAESANLGGDTpLLEGPDVN----FTANSDADIFARVTG 159
Cdd:PRK13589 85 QLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDNIANTTSFNGKQ-LLSGNFTNqefqIGASSNQTIKATIGA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 160 MMEQAEANIKAHYGLVGDGEDTFQMLISNHDGAGN-------VVAFVTSAAGDVISMTLDRDDFNGSISNIDriIEHEMV 232
Cdd:PRK13589 164 TQSSKIGVTRFETGGRSFTSGEVQLTIKNYNGIDDfkfqkvvISTSVGTGLGALAEEINKSADKTGVRATFT--VETTGV 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 233 HAVMGNQITAAMP-KWFTEGTAELIHGADDRLVVdvagdpAALMAGWNPSSAANSADYSRAYVAARMLHDDLKSAGHSGG 311
Cdd:PRK13589 242 AAIKAGTTSQDFAiNGVTIGQVAYKDGDGNGALV------SAINSVKDTTGVEASKDANGQLVLTSRDGRGIKIDGNIGG 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 312 MSALMQTMADGD---TLDSGLQKLLGISQADFETRVANEGASYIESMDLTNDDLGGIGALDSDAMGTRNAEDAVGDAF-- 386
Cdd:PRK13589 316 GAGILANMKENYgrlSLVKNDGKDILISGTNLSAIGMGATDMISQASVSLRESKGRIDANIADAMGFNSYKGGGKFVVtg 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 387 ------SYAEQPLEGFKldwSAAGFKPDEKKTFQLQTGSNAGEQSS-------FSIRGGTAERLG--------------- 438
Cdd:PRK13589 396 gfssvsAFMSSEGSGFS---RGSGYSVGSGKNYSVGLSQGIQIISSasamstvYNVSAGSGFSSGsglsqfatmkttaag 472
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 439 ----LAGVNVSANARGSIAITDKALKNIHEIRREIAGTMAELESMQRNNTAMVINTSDAKSRIKDTDFAAATSELTRNQI 514
Cdd:PRK13589 473 vkdeTAGVTTLKGAMAVMDIAETAITNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVDFAAESANFSKYNI 552
|
570 580
....*....|....*....|...
gi 1151997481 515 IQQASSTILAQANQTPNIALSLL 537
Cdd:PRK13589 553 LAQSGSYAMSQANAVQQNVLKLL 575
|
|
| PRK13588 |
PRK13588 |
flagellin B; Provisional |
4-123 |
1.86e-15 |
|
flagellin B; Provisional
Pssm-ID: 237440 [Multi-domain] Cd Length: 514 Bit Score: 79.14 E-value: 1.86e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 4 VNTNVSALKGMNFMSRVTERMNLSFEQLSSGSRINSAKDDAAGLQIANRLETQIIGTNQATRNIQDGISALQIADGAMDE 83
Cdd:PRK13588 5 INTNIAALNAHAVGVQNNRDLSSSLEKLSSGLRINKAADDASGMAIADSLRSQSANLGQAIRNANDAIGMVQTADKAMDE 84
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1151997481 84 ITNITQRMRQLAVQMSSNTLSQEDRDGAQLEI----EELINAAN 123
Cdd:PRK13588 85 QIKILDTIKTKAVQAAQDGQTLESRRALQSDIqrllEELDNIAN 128
|
|
| flgL |
PRK07701 |
flagellar hook-associated protein FlgL; Validated |
14-123 |
5.50e-15 |
|
flagellar hook-associated protein FlgL; Validated
Pssm-ID: 181087 [Multi-domain] Cd Length: 298 Bit Score: 75.80 E-value: 5.50e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 14 MNFMSRVTERMNLSFEQLSSGSRINSAKDDAAGLQIANRLETQIIGTNQATRNIQDGISALQIADGAMDEITNITQRMRQ 93
Cdd:PRK07701 13 LRNINSNLEKLDKYQEQLSTGKKITRPSDDPVVAMKSLRYRTDLAEVEQYQKNASDAKSWLENTESALDQATDILQRARE 92
|
90 100 110
....*....|....*....|....*....|....
gi 1151997481 94 LAVQMSSNTLSQEDRDGAQLEIEEL----INAAN 123
Cdd:PRK07701 93 LAVQAANGTNTQTDRQAIAQEIEQLkeqlIQIAN 126
|
|
| PRK06663 |
PRK06663 |
flagellar hook-associated protein 3; |
16-126 |
2.62e-14 |
|
flagellar hook-associated protein 3;
Pssm-ID: 180648 [Multi-domain] Cd Length: 419 Bit Score: 75.11 E-value: 2.62e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 16 FMSRVTERMNLSFEQLSSGSRINSAKDDAAGLQIANRLETQIIGTNQATRNIQDGISALQIADGAMDEITNITQRMRQLA 95
Cdd:PRK06663 16 SLRRQESKMTKLQNQLSTGQRIQKLRDDPTAATHSIRYKSRLFKLDRYQKNIDDGKDRLRYAEGYLQSITNILQRARELA 95
|
90 100 110
....*....|....*....|....*....|.
gi 1151997481 96 VQMSSNTLSQEDRDGAQLEIEELINAANGIA 126
Cdd:PRK06663 96 VQGANGTYQADDKKKIAKEIDELLEDLVDIA 126
|
|
| PRK12802 |
PRK12802 |
flagellin; Provisional |
412-537 |
2.83e-14 |
|
flagellin; Provisional
Pssm-ID: 139237 [Multi-domain] Cd Length: 282 Bit Score: 73.37 E-value: 2.83e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 412 TFQLQTGSNAGEQSSFSIR------------GGTAERLGLAGVNVSANARGSIAITDKALKNIHEIRREIAGTMAELESM 479
Cdd:PRK12802 144 TMTFQVGANTGQSNQITFGlsasfdatglgvGSGTLITGADSAAAETNAQAAITAIDAALQTINTTRADLGAAQNRLQST 223
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1151997481 480 QRNNTAMVINTSDAKSRIKDTDFAAATSELTRNQIIQQASSTILAQANQTPNIALSLL 537
Cdd:PRK12802 224 ISNLQNINENASAARGRVQDTDFAAETAQLTKQQTLQQASTSVLAQANQLPSAVLKLL 281
|
|
| Flagellin_C |
pfam00700 |
Bacterial flagellin C-terminal helical region; Flagellins polymerize to form bacterial ... |
452-537 |
5.04e-13 |
|
Bacterial flagellin C-terminal helical region; Flagellins polymerize to form bacterial flagella. There is some similarity between this family and pfam00669, particularly the motif NRFXSXIXXL. It has been suggested that these two regions associate and this is shown to be correct as structurally this family forms an extended helix that interacts with pfam00700.
Pssm-ID: 425827 [Multi-domain] Cd Length: 86 Bit Score: 64.66 E-value: 5.04e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 452 IAITDKALKNIHEIRREIAGTMAELESMQRNNTAMVINTSDAKSRIKDTDFAAATSELTRNQIIQQASSTILAQANQTPN 531
Cdd:pfam00700 1 LDLIDEAITDLDSVRADLGAVQNRLESATTNLNNQQDNLKAAISRIEDVDPAEESTRMTKLQIQIQASYSLLSQANQLPQ 80
|
....*.
gi 1151997481 532 IALSLL 537
Cdd:pfam00700 81 SLLNLL 86
|
|
| FlgL |
COG1344 |
Flagellin and related hook-associated protein FlgL [Cell motility]; |
445-538 |
5.62e-13 |
|
Flagellin and related hook-associated protein FlgL [Cell motility];
Pssm-ID: 440955 [Multi-domain] Cd Length: 245 Bit Score: 68.74 E-value: 5.62e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 445 SANARGSIAITDKALKNIHEIRREIAGTMAELESMQRNNTAMVINTSDAKSRIKDTDFAAATSELTRNQIIQQASSTILA 524
Cdd:COG1344 154 AGQRTAALGALDAALDNVSSARAELGARQNRLESAINNLSDLSENLTAALSRLEDADMAEAITRLTKLQTLLQAALAALA 233
|
90
....*....|....
gi 1151997481 525 QANQTPniALSLLS 538
Cdd:COG1344 234 QANQLS--LLDLLR 245
|
|
| PRK12804 |
PRK12804 |
flagellin; Provisional |
402-537 |
7.66e-13 |
|
flagellin; Provisional
Pssm-ID: 183759 [Multi-domain] Cd Length: 301 Bit Score: 69.26 E-value: 7.66e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 402 AAGFKPDEKKTFQLQTGSNAGEQSSFSIRGGTAERLGLAGVNVSANARGSI-----------------------AITDKA 458
Cdd:PRK12804 142 KPAAPAAGTKSLTFQIGANAAQQLSVNIEAMSADALGVKDTDGTLVTGKSVsdidvtkfanaaaaadggfddqlKIVDGA 221
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1151997481 459 LKNIHEIRREIAGTMAELESMQRNNTAMVINTSDAKSRIKDTDFAAATSELTRNQIIQQASSTILAQANQTPNIALSLL 537
Cdd:PRK12804 222 IKQVSDQRSKLGAVQNRLEHTINNLGASGENLTAAESRIRDVDMAKEMSEFTKNNILSQASQAMLAQANQQPQNVLQLL 300
|
|
| flgL |
PRK08870 |
flagellar hook-associated protein FlgL; Reviewed |
13-130 |
6.13e-10 |
|
flagellar hook-associated protein FlgL; Reviewed
Pssm-ID: 236345 [Multi-domain] Cd Length: 404 Bit Score: 61.08 E-value: 6.13e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 13 GMNFMSRVTERMNLSFEQLSSGSRINSAKDDAAGLQIANRLETQIIGTNQATRNIQDGISALQIADGAMDEITNITQRMR 92
Cdd:PRK08870 12 SVNSMLDQQSQLSQLQQQLSSGKKLLTPSDDPVAAAQAVNLSQQSALLDQYTKNINLARNRLQQEESTLGSVEDLLQRAR 91
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 1151997481 93 QLAVQMSSNTLSQEDRD--GAQLE--IEELINAANGIAESAN 130
Cdd:PRK08870 92 ELVVQAGNGSLSDSDRQaiATELQglRDQLLNLANSKDGSGN 133
|
|
| PRK12807 |
PRK12807 |
flagellin; Provisional |
390-537 |
8.22e-08 |
|
flagellin; Provisional
Pssm-ID: 171737 [Multi-domain] Cd Length: 287 Bit Score: 54.06 E-value: 8.22e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 390 EQPLEGFKLDWSAAGFKPDEKKTFQLQTGSNAGEQSSFSIRGGTAERLGLAGVNVSA------NARGSIAITDKALKNIH 463
Cdd:PRK12807 133 KNLLAGTGAVTIGSTSISGAEISIETLDSSATNQQITIKLANTTAEKLGIDATTSNIsisgaaSALAAISALNTALNTVA 212
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1151997481 464 EIRREIAGTMAELESMQRNNTAMVINTSDAKSRIKDTDFAAATSELTRNQIIQQASSTILAQANQTPNIALSLL 537
Cdd:PRK12807 213 GNRATLGATLNRLDRNVENLNNQATNMASAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLL 286
|
|
| flgL |
PRK12717 |
flagellar hook-associated protein 3; |
29-134 |
5.85e-07 |
|
flagellar hook-associated protein 3;
Pssm-ID: 171679 [Multi-domain] Cd Length: 523 Bit Score: 52.05 E-value: 5.85e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 29 EQLSSGSRINSAKDDAAGLQIANRLETQIIGTNQATRNIQDGISALQIADGAMDEITNITQRMRQLAVQMSSNTLSQEDR 108
Cdd:PRK12717 28 EQASSGIRIQTAADDPVGAARLLQLQQQQAMLDQYSGNITTIKNSLTQEESTLTSINDTLQRARELAVSAGNGGLTDADR 107
|
90 100
....*....|....*....|....*.
gi 1151997481 109 DGAQLEIEELINAANGIAESANLGGD 134
Cdd:PRK12717 108 KAIASELKQIEAQLLGLMNSKDANGQ 133
|
|
| flgL |
PRK07192 |
flagellar hook-associated protein FlgL; Reviewed |
4-134 |
4.94e-06 |
|
flagellar hook-associated protein FlgL; Reviewed
Pssm-ID: 235956 [Multi-domain] Cd Length: 305 Bit Score: 48.48 E-value: 4.94e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 4 VNTNVSALKGMNFMSRVTERMNLSFEQLSSGSRINSAKDDAAGLQIANRLETQIIGTNQATRNIQDGISALQIADGAMDE 83
Cdd:PRK07192 3 ISTNTLYSTMLRSIQQLQAGLGKLQQQMSTGKRILTPSDDPIASARLLELSREQSNNSQYADNIANLSNSLNNQEGHLSG 82
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 1151997481 84 ITNITQRMRQLAVQMSSNTLSQEDRDGAQLEIEELINAANGIAESANLGGD 134
Cdd:PRK07192 83 VNDQLQSIRSLLVAAGNGSLSDEDRSAMATELRSMLDSLLGLANAKDSEGN 133
|
|
| flgL |
PRK08870 |
flagellar hook-associated protein FlgL; Reviewed |
456-525 |
1.04e-05 |
|
flagellar hook-associated protein FlgL; Reviewed
Pssm-ID: 236345 [Multi-domain] Cd Length: 404 Bit Score: 47.98 E-value: 1.04e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 456 DKALKNIHEIRREIAGTMAELESMQRNNTAMVINTSDAKSRIKDTDFAAATSELTRNQIIQQASSTILAQ 525
Cdd:PRK08870 325 DNALNNVLTARASVGARLNELDSAEAVHEDNKLQNTSALSDLEDLDYASAISEFELQQAALQAAQQAFSK 394
|
|
| PRK12805 |
PRK12805 |
FliC/FljB family flagellin; |
456-538 |
2.61e-05 |
|
FliC/FljB family flagellin;
Pssm-ID: 183760 [Multi-domain] Cd Length: 287 Bit Score: 46.02 E-value: 2.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 456 DKALKNIHEIRREIAGTMAELESMQRNNTAMVINTSDAKSRIKDTDFAAATSELTRNQIIQQASSTILAQANQTPNIALS 535
Cdd:PRK12805 204 DELINNISNGRALLGAGMSRLSYNVSNVNNQSIATKASASSIEDADMAAEMSEMTKYKILTQTSISMLSQANQTPQMLTQ 283
|
...
gi 1151997481 536 LLS 538
Cdd:PRK12805 284 LIN 286
|
|
| flgL |
PRK07192 |
flagellar hook-associated protein FlgL; Reviewed |
456-538 |
9.43e-05 |
|
flagellar hook-associated protein FlgL; Reviewed
Pssm-ID: 235956 [Multi-domain] Cd Length: 305 Bit Score: 44.62 E-value: 9.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 456 DKALKNIHEIRREIAGTMAELESMQRNNTAMVINTSDAKSRIKDTDFAAATSELTRNQIIQQASSTILAQANQtpniaLS 535
Cdd:PRK07192 226 DDALDNVLTVRTELGSRQNELDLLDGNHEDRKLQYQKILSDLQDLDYAEALSDLSNQMAALEAAQKTFVKINS-----LS 300
|
...
gi 1151997481 536 LLS 538
Cdd:PRK07192 301 LFN 303
|
|
| flagell_flgL |
TIGR02550 |
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated ... |
456-537 |
1.10e-04 |
|
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated proteins designated FlgL (or HAP3) encoded in bacterial flagellar operons. A N-terminal region of about 150 residues and a C-terminal region of about 85 residues are conserved. Members show considerable length heterogeneity between these two well-conserved terminal regions; the seed alignment 486 columns, 393 of which are represented in the model, while members of this family are from 287 to over 500 residues in length. This model distinguishes FlgL from the flagellin gene product FliC. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 274195 [Multi-domain] Cd Length: 306 Bit Score: 44.26 E-value: 1.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1151997481 456 DKALKNIHEIRREIAGTMAELESMQRNNTAMVINTSDAKSRIKDTDFAAATSELTRNQIIQQASSTILAQANQtpniaLS 535
Cdd:TIGR02550 227 DKALDNVLSARAEVGARLNRLENLNSRLSEQKLQLTEQLSDLEDVDLAEAISDLNMQQAALQAALKTFAKIQQ-----LS 301
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..
gi 1151997481 536 LL 537
Cdd:TIGR02550 302 LF 303
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