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Conserved domains on  [gi|1144870169|gb|ONZ12209|]
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transporter [Burkholderia cenocepacia]

Protein Classification

BON domain-containing protein( domain architecture ID 1004776)

BON (Bacterial OsmY and Nodulation) domain-containing protein may attach to phospholipid membranes via its BON domain

Gene Ontology:  GO:0008289
PubMed:  12878000

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
OsmY super family cl34495
Osmotically-inducible protein OsmY, contains BON domain [Cell wall/membrane/envelope ...
 52-120 3.14e-08

Osmotically-inducible protein OsmY, contains BON domain [Cell wall/membrane/envelope biogenesis];


The actual alignment was detected with superfamily member COG2823:

Pssm-ID: 442071 [Multi-domain]  Cd Length: 157  Bit Score: 48.89  E-value: 3.14e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1144870169  52 DRAFAKKVRQAIVRAPGVGNAQVTVFAKAktGDVTLAGQIADESQDRAAVDAARQVPGVTSVKSKLQLR 120
Cdd:COG2823    20 DATIEAKVKAALLADPGLDAADINVTVYN--GVVTLTGQVPSEAEKDRAEEIARGVPGVKSVVNELRVG 86
 
Name Accession Description Interval E-value
OsmY COG2823
Osmotically-inducible protein OsmY, contains BON domain [Cell wall/membrane/envelope ...
 52-120 3.14e-08

Osmotically-inducible protein OsmY, contains BON domain [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442071 [Multi-domain]  Cd Length: 157  Bit Score: 48.89  E-value: 3.14e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1144870169  52 DRAFAKKVRQAIVRAPGVGNAQVTVFAKAktGDVTLAGQIADESQDRAAVDAARQVPGVTSVKSKLQLR 120
Cdd:COG2823    20 DATIEAKVKAALLADPGLDAADINVTVYN--GVVTLTGQVPSEAEKDRAEEIARGVPGVKSVVNELRVG 86
BON pfam04972
BON domain; This domain is found in a family of osmotic shock protection proteins. It is also ...
 52-120 6.85e-08

BON domain; This domain is found in a family of osmotic shock protection proteins. It is also found in some Secretins and a group of potential haemolysins. Its likely function is attachment to phospholipid membranes.


Pssm-ID: 428229 [Multi-domain]  Cd Length: 69  Bit Score: 46.06  E-value: 6.85e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1144870169  52 DRAFAKKVRQAIVRAPGVGNAQVTVfaKAKTGDVTLAGQIADESQDRAAVDAARQVPGVTSVKSKLQLR 120
Cdd:pfam04972   2 DADIAAKVKAALAKDPGLDAADINV--TVENGVVTLSGTVPSEAEKEKAEEIARNVAGVKKVVNQLTVA 68
PRK10568 PRK10568
molecular chaperone OsmY;
52-125 2.79e-05

molecular chaperone OsmY;


Pssm-ID: 182556 [Multi-domain]  Cd Length: 203  Bit Score: 41.31  E-value: 2.79e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1144870169  52 DRAFAKKVRQAIVRAPGVGNAQVTVfaKAKTGDVTLAGQIADESQDRAAVDAARQVPGVTSVKSKLQLRLEGGQ 125
Cdd:PRK10568   58 DSAITAKVKAALVDHDNIKSTDISV--KTHQKVVTLSGFVESQAQAEEAVKVAKGVEGVTSVSDKLHVRDAKEQ 129
 
Name Accession Description Interval E-value
OsmY COG2823
Osmotically-inducible protein OsmY, contains BON domain [Cell wall/membrane/envelope ...
 52-120 3.14e-08

Osmotically-inducible protein OsmY, contains BON domain [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442071 [Multi-domain]  Cd Length: 157  Bit Score: 48.89  E-value: 3.14e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1144870169  52 DRAFAKKVRQAIVRAPGVGNAQVTVFAKAktGDVTLAGQIADESQDRAAVDAARQVPGVTSVKSKLQLR 120
Cdd:COG2823    20 DATIEAKVKAALLADPGLDAADINVTVYN--GVVTLTGQVPSEAEKDRAEEIARGVPGVKSVVNELRVG 86
BON pfam04972
BON domain; This domain is found in a family of osmotic shock protection proteins. It is also ...
 52-120 6.85e-08

BON domain; This domain is found in a family of osmotic shock protection proteins. It is also found in some Secretins and a group of potential haemolysins. Its likely function is attachment to phospholipid membranes.


Pssm-ID: 428229 [Multi-domain]  Cd Length: 69  Bit Score: 46.06  E-value: 6.85e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1144870169  52 DRAFAKKVRQAIVRAPGVGNAQVTVfaKAKTGDVTLAGQIADESQDRAAVDAARQVPGVTSVKSKLQLR 120
Cdd:pfam04972   2 DADIAAKVKAALAKDPGLDAADINV--TVENGVVTLSGTVPSEAEKEKAEEIARNVAGVKKVVNQLTVA 68
PRK10568 PRK10568
molecular chaperone OsmY;
52-125 2.79e-05

molecular chaperone OsmY;


Pssm-ID: 182556 [Multi-domain]  Cd Length: 203  Bit Score: 41.31  E-value: 2.79e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1144870169  52 DRAFAKKVRQAIVRAPGVGNAQVTVfaKAKTGDVTLAGQIADESQDRAAVDAARQVPGVTSVKSKLQLRLEGGQ 125
Cdd:PRK10568   58 DSAITAKVKAALVDHDNIKSTDISV--KTHQKVVTLSGFVESQAQAEEAVKVAKGVEGVTSVSDKLHVRDAKEQ 129
Yop-YscD_ppl pfam16693
Inner membrane component of T3SS, periplasmic domain; Yop-YscD-ppl is the periplasmic domain ...
 69-118 3.89e-03

Inner membrane component of T3SS, periplasmic domain; Yop-YscD-ppl is the periplasmic domain of Yop proteins like YscD from Proteobacteria. YscD forms part of the inner membrane component of the bacterial type III secretion injectosome apparatus.


Pssm-ID: 293298  Cd Length: 254  Bit Score: 35.59  E-value: 3.89e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1144870169  69 VGNAQVTVFAKAKTGDVTLAGQIADESQDRAAVDA--ARQVPGVTSVKSKLQ 118
Cdd:pfam16693  71 LGYHQIKVSNGDQTGWLLLTGEVSDDAQKWNQIESllERDVPGLLGWEVELR 122
OsmY COG2823
Osmotically-inducible protein OsmY, contains BON domain [Cell wall/membrane/envelope ...
 52-119 5.82e-03

Osmotically-inducible protein OsmY, contains BON domain [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442071 [Multi-domain]  Cd Length: 157  Bit Score: 34.64  E-value: 5.82e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1144870169  52 DRAFAKKVRQAIVRAPGVGNAQVTVfaKAKTGDVTLAGqIADESQDRAAVDAARQVPGVTSVKSKLQL 119
Cdd:COG2823    93 DTWITTKVKAALLADKDVPSTNIKV--VTENGVVYLMG-LVTQAEADAAAEIARNVSGVKKVVNLFEV 157
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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