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Conserved domains on  [gi|1144066341|gb|ONR25537|]
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hypothetical protein A8E14_00415 [Burkholderia cenocepacia]

Protein Classification

NAD(P)/FAD-dependent oxidoreductase( domain architecture ID 11457516)

NAD(P)/FAD-dependent oxidoreductase catalyzes the transfer of electrons from one molecule, the electron donor or reductant, to another molecule, the electron acceptor or oxidant

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
COG2509 COG2509
FAD-dependent dehydrogenase [General function prediction only];
102-534 0e+00

FAD-dependent dehydrogenase [General function prediction only];


:

Pssm-ID: 441999 [Multi-domain]  Cd Length: 466  Bit Score: 748.09  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341 102 RPVVIGMGPCGLFAGLILAQMGFRPIILERGKAVRERTKDTFGLWRKSVLNPESNVQFGEGGAGTFSDGKLYSQIKDPNH 181
Cdd:COG2509    32 DVVIVGAGPAGLFAALELAEAGLKPLVLERGKDVEERTCPVAEFWRKGKCNPESNIQFGEGGAGTFSDGKLNTRSKDPQG 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341 182 YGRKVLDEFVKAGAPEDILYLSRPHIGTFRLVSMVEKMRASIHELGGEVRFETRVDDIEIDQGKVRALKLSNGETLRCDR 261
Cdd:COG2509   112 LIRYVLEIFVKFGAPEEILYAAKPHIGTDKLPKVVKNIREYIEELGGEIRFNTRVTDILIEDGRVKGVVTNDGEEIEADA 191

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341 262 VVLAVGHSARDTFQMLHDRGVYIEAKPFSLGFRIEHPQGLIDRSRFGKFAGHKQLGAADYKVVHHCSN-GRAVYSFCMCP 340
Cdd:COG2509   192 VILAPGHSARDWFEMLHRLGVKLEAKPFDIGVRVEHPQELIDRIQYGKFAGHPLLGAAEYKLVYQTKNyGRGVYTFCMCP 271

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341 341 GGTVVAATSEPGRVVTNGMSQYSRAERNANAGIVVGITPDDYPGGPLAGIAFQRKWEERAFELGGGDYRAPGQLVGDFIA 420
Cdd:COG2509   272 GGFVVAEASEPGLVVVNGMSYSDRKSENANFALLVSVTPTDFPGGPLAGIEYQRSIERLANELGGGNYKAPAQRLGDFLA 351

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341 421 GRPSTSLGSVEPSYKPGVNPTDLSTALPDYVIEAIREALPEIDKKIAGFAMHDAVLTGVETRTSSPIRIRRKDDYQSmNV 500
Cdd:COG2509   352 GRRSTELGSVEPTYKPGVTPGDLSLVLPYRILDALREALEAFDKKIPGFASDDALLYGVETRTSSPVRIPRDEDLET-NI 430

                         410       420       430
                  ....*....|....*....|....*....|....
gi 1144066341 501 EGLYPagegagyaggIYSAAIDGIEVAQAVALSL 534
Cdd:COG2509   431 KGLYPagegagyaggIVSAAVDGIRVAEAIAEKL 464
 
Name Accession Description Interval E-value
COG2509 COG2509
FAD-dependent dehydrogenase [General function prediction only];
102-534 0e+00

FAD-dependent dehydrogenase [General function prediction only];


Pssm-ID: 441999 [Multi-domain]  Cd Length: 466  Bit Score: 748.09  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341 102 RPVVIGMGPCGLFAGLILAQMGFRPIILERGKAVRERTKDTFGLWRKSVLNPESNVQFGEGGAGTFSDGKLYSQIKDPNH 181
Cdd:COG2509    32 DVVIVGAGPAGLFAALELAEAGLKPLVLERGKDVEERTCPVAEFWRKGKCNPESNIQFGEGGAGTFSDGKLNTRSKDPQG 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341 182 YGRKVLDEFVKAGAPEDILYLSRPHIGTFRLVSMVEKMRASIHELGGEVRFETRVDDIEIDQGKVRALKLSNGETLRCDR 261
Cdd:COG2509   112 LIRYVLEIFVKFGAPEEILYAAKPHIGTDKLPKVVKNIREYIEELGGEIRFNTRVTDILIEDGRVKGVVTNDGEEIEADA 191

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341 262 VVLAVGHSARDTFQMLHDRGVYIEAKPFSLGFRIEHPQGLIDRSRFGKFAGHKQLGAADYKVVHHCSN-GRAVYSFCMCP 340
Cdd:COG2509   192 VILAPGHSARDWFEMLHRLGVKLEAKPFDIGVRVEHPQELIDRIQYGKFAGHPLLGAAEYKLVYQTKNyGRGVYTFCMCP 271

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341 341 GGTVVAATSEPGRVVTNGMSQYSRAERNANAGIVVGITPDDYPGGPLAGIAFQRKWEERAFELGGGDYRAPGQLVGDFIA 420
Cdd:COG2509   272 GGFVVAEASEPGLVVVNGMSYSDRKSENANFALLVSVTPTDFPGGPLAGIEYQRSIERLANELGGGNYKAPAQRLGDFLA 351

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341 421 GRPSTSLGSVEPSYKPGVNPTDLSTALPDYVIEAIREALPEIDKKIAGFAMHDAVLTGVETRTSSPIRIRRKDDYQSmNV 500
Cdd:COG2509   352 GRRSTELGSVEPTYKPGVTPGDLSLVLPYRILDALREALEAFDKKIPGFASDDALLYGVETRTSSPVRIPRDEDLET-NI 430

                         410       420       430
                  ....*....|....*....|....*....|....
gi 1144066341 501 EGLYPagegagyaggIYSAAIDGIEVAQAVALSL 534
Cdd:COG2509   431 KGLYPagegagyaggIVSAAVDGIRVAEAIAEKL 464
PRK07233 PRK07233
hypothetical protein; Provisional
 104-266 2.30e-06

hypothetical protein; Provisional


Pssm-ID: 235977 [Multi-domain]  Cd Length: 434  Bit Score: 49.89  E-value: 2.30e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341 104 VVIGMGPCGLFAGLILAQMGFRPIILER-----GKAVRERTKD----------------TFGLWRKsvLNPESNVQFGEG 162
Cdd:PRK07233    3 AIVGGGIAGLAAAYRLAKRGHEVTVFEAddqlgGLAASFEFGGlpierfyhhifksdeaLLELLDE--LGLEDKLRWRET 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341 163 GAGTFSDGKLYS-----------------------------QIKDP-------------NHYGRKVLDEFV------KAG 194
Cdd:PRK07233   81 KTGYYVDGKLYPlgtplellrfphlslidkfrlglltllarRIKDWraldkvpaeewlrRWSGEGVYEVFWepllesKFG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341 195 APED------------ILYLSRPHIGTFRL-------VSMVEKMRASIHELGGEVRFETRVDDIEIDQGKVRALKLsNGE 255
Cdd:PRK07233  161 DYADdvsaawlwsrikRRGNRRYSLFGEKLgyleggfATLIDALAEAIEARGGEIRLGTPVTSVVIDGGGVTGVEV-DGE 239

                         250
                  ....*....|.
gi 1144066341 256 TLRCDRVVLAV 266
Cdd:PRK07233  240 EEDFDAVISTA 250
Amino_oxidase pfam01593
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ...
 214-275 2.28e-04

Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.


Pssm-ID: 396255 [Multi-domain]  Cd Length: 446  Bit Score: 43.63  E-value: 2.28e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1144066341 214 SMVEKMRASIheLGGEVRFETRVDDIEIDQGKVRaLKLSNGETLRCDRVVLAV--GHSARDTFQ 275
Cdd:pfam01593 207 ALPDALAAQL--LGGDVRLNTRVRSIDREGDGVT-VTLTDGEVIEADAVIVTVplGVLKRILFT 267
 
Name Accession Description Interval E-value
COG2509 COG2509
FAD-dependent dehydrogenase [General function prediction only];
102-534 0e+00

FAD-dependent dehydrogenase [General function prediction only];


Pssm-ID: 441999 [Multi-domain]  Cd Length: 466  Bit Score: 748.09  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341 102 RPVVIGMGPCGLFAGLILAQMGFRPIILERGKAVRERTKDTFGLWRKSVLNPESNVQFGEGGAGTFSDGKLYSQIKDPNH 181
Cdd:COG2509    32 DVVIVGAGPAGLFAALELAEAGLKPLVLERGKDVEERTCPVAEFWRKGKCNPESNIQFGEGGAGTFSDGKLNTRSKDPQG 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341 182 YGRKVLDEFVKAGAPEDILYLSRPHIGTFRLVSMVEKMRASIHELGGEVRFETRVDDIEIDQGKVRALKLSNGETLRCDR 261
Cdd:COG2509   112 LIRYVLEIFVKFGAPEEILYAAKPHIGTDKLPKVVKNIREYIEELGGEIRFNTRVTDILIEDGRVKGVVTNDGEEIEADA 191

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341 262 VVLAVGHSARDTFQMLHDRGVYIEAKPFSLGFRIEHPQGLIDRSRFGKFAGHKQLGAADYKVVHHCSN-GRAVYSFCMCP 340
Cdd:COG2509   192 VILAPGHSARDWFEMLHRLGVKLEAKPFDIGVRVEHPQELIDRIQYGKFAGHPLLGAAEYKLVYQTKNyGRGVYTFCMCP 271

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341 341 GGTVVAATSEPGRVVTNGMSQYSRAERNANAGIVVGITPDDYPGGPLAGIAFQRKWEERAFELGGGDYRAPGQLVGDFIA 420
Cdd:COG2509   272 GGFVVAEASEPGLVVVNGMSYSDRKSENANFALLVSVTPTDFPGGPLAGIEYQRSIERLANELGGGNYKAPAQRLGDFLA 351

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341 421 GRPSTSLGSVEPSYKPGVNPTDLSTALPDYVIEAIREALPEIDKKIAGFAMHDAVLTGVETRTSSPIRIRRKDDYQSmNV 500
Cdd:COG2509   352 GRRSTELGSVEPTYKPGVTPGDLSLVLPYRILDALREALEAFDKKIPGFASDDALLYGVETRTSSPVRIPRDEDLET-NI 430

                         410       420       430
                  ....*....|....*....|....*....|....
gi 1144066341 501 EGLYPagegagyaggIYSAAIDGIEVAQAVALSL 534
Cdd:COG2509   431 KGLYPagegagyaggIVSAAVDGIRVAEAIAEKL 464
COG1233 COG1233
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ...
 214-277 2.49e-10

Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440846 [Multi-domain]  Cd Length: 491  Bit Score: 62.94  E-value: 2.49e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1144066341 214 SMVEKMRASIHELGGEVRFETRVDDIEIDQGKVRALKLSNGETLRCDRVVLAVghSARDTFQML 277
Cdd:COG1233   223 ALADALARLAEELGGEIRTGAEVERILVEGGRATGVRLADGEEIRADAVVSNA--DPAHTYLRL 284
COG3349 COG3349
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ...
 220-270 6.46e-09

Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];


Pssm-ID: 442577 [Multi-domain]  Cd Length: 445  Bit Score: 58.33  E-value: 6.46e-09
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1144066341 220 RASIHELGGEVRFETRVDDIEIDQGKVRALKLSNGETLRCDRVVLAVGHSA 270
Cdd:COG3349   219 LAYLEARGGEVRLGTRVRALEFDGGRVTGLVLADGETVPADAVVLAVPPEV 269
DadA COG0665
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
104-280 1.33e-07

Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];


Pssm-ID: 440429 [Multi-domain]  Cd Length: 364  Bit Score: 53.76  E-value: 1.33e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341 104 VVIGMGPCGLFAGLILAQMGFRPIILERGKAVRERTKDTFGLWRKSVLNP--ESNVQFGEGGAGTFSD------------ 169
Cdd:COG0665     6 VVIGGGIAGLSTAYHLARRGLDVTVLERGRPGSGASGRNAGQLRPGLAALadRALVRLAREALDLWRElaaelgidcdfr 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341 170 --GKLY--SQIKDPNHYgRKVLDEFVKAGAPEDIL----------YLSRPHI---------GTFRLVSMVEKMRASIHEL 226
Cdd:COG0665    86 rtGVLYlaRTEAELAAL-RAEAEALRALGLPVELLdaaelrerepGLGSPDYagglydpddGHVDPAKLVRALARAARAA 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1144066341 227 GGEVRFETRVDDIEIDQGKVRALKLSNGeTLRCDRVVLAVGHSARDTFQMLHDR 280
Cdd:COG0665   165 GVRIREGTPVTGLEREGGRVTGVRTERG-TVRADAVVLAAGAWSARLLPMLGLR 217
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
109-271 1.72e-07

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 52.66  E-value: 1.72e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341 109 GPCGLFAGLILAQMGFRPIILERGKAVRE---------RTKDTFGLWRKS--VLNPESNVQFgeggagTFSDGKlYSQIK 177
Cdd:COG0644     2 GPAGSAAARRLARAGLSVLLLEKGSFPGDkicgggllpRALEELEPLGLDepLERPVRGARF------YSPGGK-SVELP 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341 178 DPNHYG----RKVLDEFvkagapedilylsrphigtfrlvsmvekMRASIHELGGEVRFETRVDDIEIDQGKVRaLKLSN 253
Cdd:COG0644    75 PGRGGGyvvdRARFDRW----------------------------LAEQAEEAGAEVRTGTRVTDVLRDDGRVV-VRTGD 125

                         170
                  ....*....|....*...
gi 1144066341 254 GETLRCDRVVLAVGHSAR 271
Cdd:COG0644   126 GEEIRADYVVDADGARSL 143
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 104-265 4.01e-07

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 51.86  E-value: 4.01e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341 104 VVIGMGPCGLFAGLILAQMGFRPIILERGKAVRERTK------------DTFGLWRksvlnpesnvQFGEGGA----GTF 167
Cdd:COG0654     7 LIVGGGPAGLALALALARAGIRVTVVERAPPPRPDGRgialsprslellRRLGLWD----------RLLARGApirgIRV 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341 168 SDGklysqikdpnHYGRKVLDEFVKAGAPEDILYLSRPHIGTFrlvsmvekMRASIHELGGEVRFETRVDDIEIDQGKVR 247
Cdd:COG0654    77 RDG----------SDGRVLARFDAAETGLPAGLVVPRADLERA--------LLEAARALGVELRFGTEVTGLEQDADGVT 138

                         170
                  ....*....|....*...
gi 1144066341 248 aLKLSNGETLRCDRVVLA 265
Cdd:COG0654   139 -VTLADGRTLRADLVVGA 155
HemY COG1232
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ...
 104-270 1.47e-06

Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440845 [Multi-domain]  Cd Length: 443  Bit Score: 50.60  E-value: 1.47e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341 104 VVIGMGPCGLFAGLILAQMGFRPIILER-----GKAVRERTK----DTFG------------LWRKsvLNPESNVQFGEG 162
Cdd:COG1232     5 AVIGGGIAGLTAAYRLAKAGHEVTVLEAsdrvgGLIRTVEVDgfriDRGPhsfltrdpevleLLRE--LGLGDELVWPNT 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341 163 GAGT-FSDGKLYS-------------------------------QIKDP--------NHYGRKVLDEFVK-------AGA 195
Cdd:COG1232    83 RKSYiYYGGKLHPlpqgplallrspllslagklrallellaprrPPGEDeslaefvrRRFGREVYERLVEpllegvyAGD 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341 196 PEDI-----------LYLSR-----------------PHIGTFR--LVSMVEKMRASIHElgGEVRFETRVDDIEIDQGK 245
Cdd:COG1232   163 PDELsadwafprlkrLELEHgslikgalalrkgakagEVFGYLRggLGTLVEALAEALEA--GEIRLGTRVTAIEREGGG 240

                         250       260
                  ....*....|....*....|....*
gi 1144066341 246 VRaLKLSNGETLRCDRVVLAVGHSA 270
Cdd:COG1232   241 WR-VTTSDGETIEADAVVSATPAPA 264
PRK07233 PRK07233
hypothetical protein; Provisional
 104-266 2.30e-06

hypothetical protein; Provisional


Pssm-ID: 235977 [Multi-domain]  Cd Length: 434  Bit Score: 49.89  E-value: 2.30e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341 104 VVIGMGPCGLFAGLILAQMGFRPIILER-----GKAVRERTKD----------------TFGLWRKsvLNPESNVQFGEG 162
Cdd:PRK07233    3 AIVGGGIAGLAAAYRLAKRGHEVTVFEAddqlgGLAASFEFGGlpierfyhhifksdeaLLELLDE--LGLEDKLRWRET 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341 163 GAGTFSDGKLYS-----------------------------QIKDP-------------NHYGRKVLDEFV------KAG 194
Cdd:PRK07233   81 KTGYYVDGKLYPlgtplellrfphlslidkfrlglltllarRIKDWraldkvpaeewlrRWSGEGVYEVFWepllesKFG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341 195 APED------------ILYLSRPHIGTFRL-------VSMVEKMRASIHELGGEVRFETRVDDIEIDQGKVRALKLsNGE 255
Cdd:PRK07233  161 DYADdvsaawlwsrikRRGNRRYSLFGEKLgyleggfATLIDALAEAIEARGGEIRLGTPVTSVVIDGGGVTGVEV-DGE 239

                         250
                  ....*....|.
gi 1144066341 256 TLRCDRVVLAV 266
Cdd:PRK07233  240 EEDFDAVISTA 250
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
 92-278 1.12e-05

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 47.94  E-value: 1.12e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341  92 TKAPEHADFlrpVVIGMGPCGLFAGLILAQMGFRPIILERGKAVrertkdtFGLWRksvLN--PesnvqfgegGAGTFSD 169
Cdd:COG2072     1 TAATEHVDV---VVIGAGQAGLAAAYHLRRAGIDFVVLEKADDV-------GGTWR---DNryP---------GLRLDTP 58

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341 170 GKLYSqikdpnhygrkvLDEFVKAGAPEDilYLSRPHIgtFR-LVSMVEKmrasiHELGGEVRFETRVDDIEIDQGKVR- 247
Cdd:COG2072    59 SHLYS------------LPFFPNWSDDPD--FPTGDEI--LAyLEAYADK-----FGLRRPIRFGTEVTSARWDEADGRw 117

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 1144066341 248 ALKLSNGETLRCDRVVLAVGH---------SARDTF--QMLH 278
Cdd:COG2072   118 TVTTDDGETLTARFVVVATGPlsrpkipdiPGLEDFagEQLH 159
YdhS COG4529
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];
201-278 7.43e-05

Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];


Pssm-ID: 443597 [Multi-domain]  Cd Length: 466  Bit Score: 45.33  E-value: 7.43e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1144066341 201 YLSRPHIGTFrLVSMVEKMRASIHELGGEVRFETRVDDIEIDQGKVRaLKLSNGETLRCDRVVLAVGHSARDTFQMLH 278
Cdd:COG4529    95 FVPRRLFGEY-LRERLAEALARAPAGVRLRHIRAEVVDLERDDGGYR-VTLADGETLRADAVVLATGHPPPAPPPGLA 170
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
104-271 7.60e-05

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 44.73  E-value: 7.60e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341 104 VVIGMGPCGLFAGLILAQMGFRPIILERGkavrertkdtfglwrksvlnpesnvQFGeggagtfsdGKLySQIKDPNHYg 183
Cdd:COG0492     4 VIIGAGPAGLTAAIYAARAGLKTLVIEGG-------------------------EPG---------GQL-ATTKEIENY- 47

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341 184 rkvldefvkAGAPEDILylsrphiGTfrlvSMVEKMRASIHELGGEVRFETrVDDIEIDQGKVRaLKLSNGETLRCDRVV 263
Cdd:COG0492    48 ---------PGFPEGIS-------GP----ELAERLREQAERFGAEILLEE-VTSVDKDDGPFR-VTTDDGTEYEAKAVI 105


                  ....*...
gi 1144066341 264 LAVGHSAR 271
Cdd:COG0492   106 IATGAGPR 113
Amino_oxidase pfam01593
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ...
 214-275 2.28e-04

Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.


Pssm-ID: 396255 [Multi-domain]  Cd Length: 446  Bit Score: 43.63  E-value: 2.28e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1144066341 214 SMVEKMRASIheLGGEVRFETRVDDIEIDQGKVRaLKLSNGETLRCDRVVLAV--GHSARDTFQ 275
Cdd:pfam01593 207 ALPDALAAQL--LGGDVRLNTRVRSIDREGDGVT-VTLTDGEVIEADAVIVTVplGVLKRILFT 267
PRK08274 PRK08274
FAD-dependent tricarballylate dehydrogenase TcuA;
215-267 4.90e-04

FAD-dependent tricarballylate dehydrogenase TcuA;


Pssm-ID: 236214 [Multi-domain]  Cd Length: 466  Bit Score: 42.55  E-value: 4.90e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1144066341 215 MVEKMRASIHELGGEVRFETRVDDIEIDQGKVRALKLSNG----ETLRCDRVVLAVG 267
Cdd:PRK08274  133 LVNALYRSAERLGVEIRYDAPVTALELDDGRFVGARAGSAaggaERIRAKAVVLAAG 189
mhpA PRK06183
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
104-131 1.19e-03

bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;


Pssm-ID: 235727 [Multi-domain]  Cd Length: 500  Bit Score: 41.43  E-value: 1.19e-03
                          10        20
                  ....*....|....*....|....*...
gi 1144066341 104 VVIGMGPCGLFAGLILAQMGFRPIILER 131
Cdd:PRK06183   14 VIVGAGPVGLTLANLLGQYGVRVLVLER 41
PLN02612 PLN02612
phytoene desaturase
 223-266 3.05e-03

phytoene desaturase


Pssm-ID: 215330 [Multi-domain]  Cd Length: 567  Bit Score: 40.21  E-value: 3.05e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 1144066341 223 IHELGGEVRFETRVDDIEI-DQGKVRALKLSNGETLRCDRVVLAV 266
Cdd:PLN02612  318 FQSLGGEVRLNSRIKKIELnDDGTVKHFLLTNGSVVEGDVYVSAT 362
FadH2 COG0446
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ...
 188-268 4.60e-03

NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];


Pssm-ID: 440215 [Multi-domain]  Cd Length: 322  Bit Score: 39.41  E-value: 4.60e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1144066341 188 DEFVKAGAPEDILYLSrPHIGTFRLVSMVEKMRASIHELGGEVRFETRVDDIEiDQGKVRAlKLSNGETLRCDRVVLAVG 267
Cdd:COG0446   141 EALRKRGLKVTLVERA-PRLLGVLDPEMAALLEEELREHGVELRLGETVVAID-GDDKVAV-TLTDGEEIPADLVVVAPG 217


                  .
gi 1144066341 268 H 268
Cdd:COG0446   218 V 218
YobN COG1231
Monoamine oxidase [Amino acid transport and metabolism];
225-266 5.62e-03

Monoamine oxidase [Amino acid transport and metabolism];


Pssm-ID: 440844 [Multi-domain]  Cd Length: 440  Bit Score: 39.13  E-value: 5.62e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 1144066341 225 ELGGEVRFETRVDDIEIDQGKVRaLKLSNGETLRCDRVVLAV 266
Cdd:COG1231   211 ELGDRIRLGAPVTRIRQDGDGVT-VTTDDGGTVRADAVIVTV 251
Ndh COG1252
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];
214-270 8.62e-03

NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];


Pssm-ID: 440864 [Multi-domain]  Cd Length: 386  Bit Score: 38.58  E-value: 8.62e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1144066341 214 SMVEKMRASIHELGGEVRFETRVDdiEIDQGKVRalkLSNGETLRCDRVVLAVGHSA 270
Cdd:COG1252   204 KLSEAAEKELEKRGVEVHTGTRVT--EVDADGVT---LEDGEEIPADTVIWAAGVKA 255
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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