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Conserved domains on  [gi|1091083673|gb|OHQ17233|]
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pyridine nucleotide-disulfide oxidoreductase [Rothia sp. HMSC064F07]

Protein Classification

ferredoxin--NADP reductase domain-containing protein( domain architecture ID 1000996)

ferredoxin--NADP reductase domain-containing protein may serve as an electron transfer protein and supply electrons to P450 systems

CATH:  3.40.50.720|3.50.50.60
EC:  1.18.1.-
Gene Ontology:  GO:0004324|GO:0050661|GO:0071949
PubMed:  10998235
SCOP:  4000129

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
PLN02852 super family cl30539
ferredoxin-NADP+ reductase
 2-464 3.84e-140

ferredoxin-NADP+ reductase


The actual alignment was detected with superfamily member PLN02852:

Pssm-ID: 357415  Cd Length: 491  Bit Score: 411.01  E-value: 3.84e-140
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673   2 SEAARPLRVAVIGAGPAGIYTADILTKSEEvrtgavEVAIDIFDRYPAPFGLIRYGVAPDHPRIKGIITALHKVLDRGDI 81
Cdd:PLN02852   21 SSTSEPLHVCVVGSGPAGFYTADKLLKAHD------GARVDIIERLPTPFGLVRSGVAPDHPETKNVTNQFSRVATDDRV 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673  82 RFFGNVEYGKDLTLADLREHYDAIIFATGAIFDAPLNIKGIDLDGSYGAADFVSWYDGHPDYPRTWP--LEAEQVAVLGN 159
Cdd:PLN02852   95 SFFGNVTLGRDVSLSELRDLYHVVVLAYGAESDRRLGIPGEDLPGVLSAREFVWWYNGHPDCVHLPPdlKSSDTAVVLGQ 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 160 GNVALDVSRILSKHADDLLVTEIPDNVYEGLKASPVTDVHVFGRRGPAQMKFTPLELRELAHSRDVDIVLYEEDFQFDAA 239
Cdd:PLN02852  175 GNVALDCARILLRPTDELASTDIAEHALEALRGSSVRKVYLVGRRGPVQAACTAKELRELLGLKNVRVRIKEADLTLSPE 254

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 240 SEEAMEKNAQTKVMMKTLRGWLEDQKTNEQTASRRLHLHFLQSPHEIL---GEDGKVVGLRMERNKLDGNGG-----IIG 311
Cdd:PLN02852  255 DEEELKASRPKRRVYELLSKAAAAGKCAPSGGQRELHFVFFRNPTRFLdsgDGNGHVAGVKLERTVLEGAAGsgkqvAVG 334

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 312 TGEYVDYPVQAVYRAIGYFGSELPEIGYDDKRGVITNVEGRVV--DENGEVVPGLYASGWIKRGPVGLIGSTKSDALETI 389
Cdd:PLN02852  335 TGEFEDLPCGLVLKSIGYKSLPVDGLPFDHKRGVVPNVHGRVLssASGADTEPGLYVVGWLKRGPTGIIGTNLTCAEETV 414

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 390 THLLEDRENLY-----TAPEPEAEAFSAYLDSKGIKYTTWEGWHRLDDHEKALGAaskdAAGEPRArvKVVDRDEMVNIS 464
Cdd:PLN02852  415 ASIAEDLEQGRlrgvaSPPKPGRDGLLELLESRGVRVVPFSGWEKIDSAEKEAGR----ARGKPRE--KITSIEEMLKAA 488
 
Name Accession Description Interval E-value
PLN02852 PLN02852
ferredoxin-NADP+ reductase
 2-464 3.84e-140

ferredoxin-NADP+ reductase


Pssm-ID: 215457  Cd Length: 491  Bit Score: 411.01  E-value: 3.84e-140
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673   2 SEAARPLRVAVIGAGPAGIYTADILTKSEEvrtgavEVAIDIFDRYPAPFGLIRYGVAPDHPRIKGIITALHKVLDRGDI 81
Cdd:PLN02852   21 SSTSEPLHVCVVGSGPAGFYTADKLLKAHD------GARVDIIERLPTPFGLVRSGVAPDHPETKNVTNQFSRVATDDRV 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673  82 RFFGNVEYGKDLTLADLREHYDAIIFATGAIFDAPLNIKGIDLDGSYGAADFVSWYDGHPDYPRTWP--LEAEQVAVLGN 159
Cdd:PLN02852   95 SFFGNVTLGRDVSLSELRDLYHVVVLAYGAESDRRLGIPGEDLPGVLSAREFVWWYNGHPDCVHLPPdlKSSDTAVVLGQ 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 160 GNVALDVSRILSKHADDLLVTEIPDNVYEGLKASPVTDVHVFGRRGPAQMKFTPLELRELAHSRDVDIVLYEEDFQFDAA 239
Cdd:PLN02852  175 GNVALDCARILLRPTDELASTDIAEHALEALRGSSVRKVYLVGRRGPVQAACTAKELRELLGLKNVRVRIKEADLTLSPE 254

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 240 SEEAMEKNAQTKVMMKTLRGWLEDQKTNEQTASRRLHLHFLQSPHEIL---GEDGKVVGLRMERNKLDGNGG-----IIG 311
Cdd:PLN02852  255 DEEELKASRPKRRVYELLSKAAAAGKCAPSGGQRELHFVFFRNPTRFLdsgDGNGHVAGVKLERTVLEGAAGsgkqvAVG 334

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 312 TGEYVDYPVQAVYRAIGYFGSELPEIGYDDKRGVITNVEGRVV--DENGEVVPGLYASGWIKRGPVGLIGSTKSDALETI 389
Cdd:PLN02852  335 TGEFEDLPCGLVLKSIGYKSLPVDGLPFDHKRGVVPNVHGRVLssASGADTEPGLYVVGWLKRGPTGIIGTNLTCAEETV 414

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 390 THLLEDRENLY-----TAPEPEAEAFSAYLDSKGIKYTTWEGWHRLDDHEKALGAaskdAAGEPRArvKVVDRDEMVNIS 464
Cdd:PLN02852  415 ASIAEDLEQGRlrgvaSPPKPGRDGLLELLESRGVRVVPFSGWEKIDSAEKEAGR----ARGKPRE--KITSIEEMLKAA 488
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
 9-374 1.19e-50

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 177.63  E-value: 1.19e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673   9 RVAVIGAGPAGIYTADILTKSeevrtGaveVAIDIFDRYPAPFGLIRYGVaPDHPRIKGIITALHKVLDRGDIRFFGNVE 88
Cdd:COG0493   123 KVAVVGSGPAGLAAAYQLARA-----G---HEVTVFEALDKPGGLLRYGI-PEFRLPKDVLDREIELIEALGVEFRTNVE 193

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673  89 YGKDLTLADLREHYDAIIFATGAIFDAPLNIKGIDLDGSYGAADFVSWYDGHPDyPRTWPLEAEQVAVLGNGNVALDVSR 168
Cdd:COG0493   194 VGKDITLDELLEEFDAVFLATGAGKPRDLGIPGEDLKGVHSAMDFLTAVNLGEA-PDTILAVGKRVVVIGGGNTAMDCAR 272

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 169 ILSKHAddllvteipdnvyeglkaspVTDVHVFGRRGPAQMKFTPLELrELAHSRDVDIvlyeedfqfdaaseeamekna 248
Cdd:COG0493   273 TALRLG--------------------AESVTIVYRRTREEMPASKEEV-EEALEEGVEF--------------------- 310

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 249 qtkvmmktlrgwledqktneqtasrrlhlHFLQSPHEILG-EDGKVVGLRMERNKL---DGNGG---IIGTGEYVDYPVQ 321
Cdd:COG0493   311 -----------------------------LFLVAPVEIIGdENGRVTGLECVRMELgepDESGRrrpVPIEGSEFTLPAD 361

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1091083673 322 AVYRAIGYFGselPEIGYDDKRGVITNVEGRVV--DENGE-VVPGLYASGWIKRGP 374
Cdd:COG0493   362 LVILAIGQTP---DPSGLEEELGLELDKRGTIVvdEETYQtSLPGVFAGGDAVRGP 414
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
 9-174 9.07e-04

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 41.15  E-value: 9.07e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673   9 RVAVIGAGPAGIYTADILtKSEEVRTGAVEVAIDIFDRYPAPFGLIRYgvAPDHPRIKGIITALHKVLDRGDIRFFGNVE 88
Cdd:pfam07992   2 DVVVIGGGPAGLAAALTL-AQLGGKVTLIEDEGTCPYGGCVLSKALLG--AAEAPEIASLWADLYKRKEEVVKKLNNGIE 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673  89 Y------------GKDLTLADLREH------YDAIIFATGAiFDAPLNIKGIDLDGSYGAADFVSWYDGHPDyprtwpLE 150
Cdd:pfam07992  79 VllgtevvsidpgAKKVVLEELVDGdgetitYDRLVIATGA-RPRLPPIPGVELNVGFLVRTLDSAEALRLK------LL 151

                         170       180
                  ....*....|....*....|....
gi 1091083673 151 AEQVAVLGNGNVALDVSRILSKHA 174
Cdd:pfam07992 152 PKRVVVVGGGYIGVELAAALAKLG 175
 
Name Accession Description Interval E-value
PLN02852 PLN02852
ferredoxin-NADP+ reductase
 2-464 3.84e-140

ferredoxin-NADP+ reductase


Pssm-ID: 215457  Cd Length: 491  Bit Score: 411.01  E-value: 3.84e-140
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673   2 SEAARPLRVAVIGAGPAGIYTADILTKSEEvrtgavEVAIDIFDRYPAPFGLIRYGVAPDHPRIKGIITALHKVLDRGDI 81
Cdd:PLN02852   21 SSTSEPLHVCVVGSGPAGFYTADKLLKAHD------GARVDIIERLPTPFGLVRSGVAPDHPETKNVTNQFSRVATDDRV 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673  82 RFFGNVEYGKDLTLADLREHYDAIIFATGAIFDAPLNIKGIDLDGSYGAADFVSWYDGHPDYPRTWP--LEAEQVAVLGN 159
Cdd:PLN02852   95 SFFGNVTLGRDVSLSELRDLYHVVVLAYGAESDRRLGIPGEDLPGVLSAREFVWWYNGHPDCVHLPPdlKSSDTAVVLGQ 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 160 GNVALDVSRILSKHADDLLVTEIPDNVYEGLKASPVTDVHVFGRRGPAQMKFTPLELRELAHSRDVDIVLYEEDFQFDAA 239
Cdd:PLN02852  175 GNVALDCARILLRPTDELASTDIAEHALEALRGSSVRKVYLVGRRGPVQAACTAKELRELLGLKNVRVRIKEADLTLSPE 254

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 240 SEEAMEKNAQTKVMMKTLRGWLEDQKTNEQTASRRLHLHFLQSPHEIL---GEDGKVVGLRMERNKLDGNGG-----IIG 311
Cdd:PLN02852  255 DEEELKASRPKRRVYELLSKAAAAGKCAPSGGQRELHFVFFRNPTRFLdsgDGNGHVAGVKLERTVLEGAAGsgkqvAVG 334

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 312 TGEYVDYPVQAVYRAIGYFGSELPEIGYDDKRGVITNVEGRVV--DENGEVVPGLYASGWIKRGPVGLIGSTKSDALETI 389
Cdd:PLN02852  335 TGEFEDLPCGLVLKSIGYKSLPVDGLPFDHKRGVVPNVHGRVLssASGADTEPGLYVVGWLKRGPTGIIGTNLTCAEETV 414

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 390 THLLEDRENLY-----TAPEPEAEAFSAYLDSKGIKYTTWEGWHRLDDHEKALGAaskdAAGEPRArvKVVDRDEMVNIS 464
Cdd:PLN02852  415 ASIAEDLEQGRlrgvaSPPKPGRDGLLELLESRGVRVVPFSGWEKIDSAEKEAGR----ARGKPRE--KITSIEEMLKAA 488
GltD COG0493
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ...
 9-374 1.19e-50

NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis


Pssm-ID: 440259 [Multi-domain]  Cd Length: 434  Bit Score: 177.63  E-value: 1.19e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673   9 RVAVIGAGPAGIYTADILTKSeevrtGaveVAIDIFDRYPAPFGLIRYGVaPDHPRIKGIITALHKVLDRGDIRFFGNVE 88
Cdd:COG0493   123 KVAVVGSGPAGLAAAYQLARA-----G---HEVTVFEALDKPGGLLRYGI-PEFRLPKDVLDREIELIEALGVEFRTNVE 193

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673  89 YGKDLTLADLREHYDAIIFATGAIFDAPLNIKGIDLDGSYGAADFVSWYDGHPDyPRTWPLEAEQVAVLGNGNVALDVSR 168
Cdd:COG0493   194 VGKDITLDELLEEFDAVFLATGAGKPRDLGIPGEDLKGVHSAMDFLTAVNLGEA-PDTILAVGKRVVVIGGGNTAMDCAR 272

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 169 ILSKHAddllvteipdnvyeglkaspVTDVHVFGRRGPAQMKFTPLELrELAHSRDVDIvlyeedfqfdaaseeamekna 248
Cdd:COG0493   273 TALRLG--------------------AESVTIVYRRTREEMPASKEEV-EEALEEGVEF--------------------- 310

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 249 qtkvmmktlrgwledqktneqtasrrlhlHFLQSPHEILG-EDGKVVGLRMERNKL---DGNGG---IIGTGEYVDYPVQ 321
Cdd:COG0493   311 -----------------------------LFLVAPVEIIGdENGRVTGLECVRMELgepDESGRrrpVPIEGSEFTLPAD 361

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1091083673 322 AVYRAIGYFGselPEIGYDDKRGVITNVEGRVV--DENGE-VVPGLYASGWIKRGP 374
Cdd:COG0493   362 LVILAIGQTP---DPSGLEEELGLELDKRGTIVvdEETYQtSLPGVFAGGDAVRGP 414
PTZ00188 PTZ00188
adrenodoxin reductase; Provisional
 1-457 3.67e-47

adrenodoxin reductase; Provisional


Pssm-ID: 240308  Cd Length: 506  Bit Score: 170.06  E-value: 3.67e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673   1 MSEAARPLRVAVIGAGPAGIYTADILTKSEEVRtgavevaIDIFDRYPAPFGLIRYGVAPDHPRIKGIITALHKVLDRGD 80
Cdd:PTZ00188   33 FTNEAKPFKVGIIGAGPSALYCCKHLLKHERVK-------VDIFEKLPNPYGLIRYGVAPDHIHVKNTYKTFDPVFLSPN 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673  81 IRFFGNVEYGKDLTLADLREHYDAIIFATGAiFDAPLNIKGIDLD--------------GSYGAADFVSWYDGHPDYPRT 146
Cdd:PTZ00188  106 YRFFGNVHVGVDLKMEELRNHYNCVIFCCGA-SEVSIPIGQQDEDkavsggetnprkqnGIFHARDLIYFYNNMYNDVRC 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 147 WPLEA--------EQVAVLGNGNVALDVSRILSKHADDLLVTEIPDNVYEGLKASPVTDVHVFGRRGPAQMKFTPLELRE 218
Cdd:PTZ00188  185 KAVDNylnsfenfTTSIIIGNGNVSLDIARILIKSPDDLSKTDISSDYLKVIKRHNIKHIYIVGRRGFWQSSFTNAELRE 264

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 219 LAHSRDVDIVL----YEEDFQFDAASEEAMEKNAQTKVMMKTLRGWLEDQKTNEQTASRR-LHLHFLQSPHEILGEDGKV 293
Cdd:PTZ00188  265 LISLENTKVILskknYDLCCHLKSDEENTNMKKRQHEIFQKMVKNYEEVEKNKEFYKTYKiIEFIFYFEIRQIRPIDGAM 344

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 294 VGLRMERNK-LDGNGGIIGTGEYVDYPVqaVYRAIGYFGSELPEIGYDDKRGVITnvegrvvDENGEVVPGLYASGWIKR 372
Cdd:PTZ00188  345 KNVELELNKnVPMSFSSFKENKVLVTPL--VIFATGFKKSNFAENLYNQSVQMFK-------EDIGQHKFAIFKAGWFDK 415

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 373 GPVGLIGS----TKSDALETITHLleDRENLYTAPEpeaeaFSAYLDSKGIKYTTWEGWHRLDDHEKALGaASKDAAGEP 448
Cdd:PTZ00188  416 GPKGNIASqilnSKNSTHLVLNFL--QKVDIFFDND-----ISSLLKEKQIPYVSFDDWTYLHQLEKQMG-AQQNKIAQK 487


                  ....*....
gi 1091083673 449 RARVKVVDR 457
Cdd:PTZ00188  488 FSQTGEVLR 496
PRK11749 PRK11749
dihydropyrimidine dehydrogenase subunit A; Provisional
 4-373 9.71e-35

dihydropyrimidine dehydrogenase subunit A; Provisional


Pssm-ID: 236967 [Multi-domain]  Cd Length: 457  Bit Score: 134.92  E-value: 9.71e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673   4 AARPLRVAVIGAGPAGIYTADILTKSeevrtGaveVAIDIFDRYPAPFGLIRYGVA----PdhpriKGIITALHKVLDRG 79
Cdd:PRK11749  137 PKTGKKVAVIGAGPAGLTAAHRLARK-----G---YDVTIFEARDKAGGLLRYGIPefrlP-----KDIVDREVERLLKL 203

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673  80 DIRFFGNVEYGKDLTLADLREHYDAIIFATGAIFDAPLNIKGIDLDGSYGAADFVSWYD-GHPDYPrtwPLEAEQVAVLG 158
Cdd:PRK11749  204 GVEIRTNTEVGRDITLDELRAGYDAVFIGTGAGLPRFLGIPGENLGGVYSAVDFLTRVNqAVADYD---LPVGKRVVVIG 280

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 159 NGNVALDVSRILSKhaddllvteipdnvyegLKAspvTDVHVFGRRGPAQMkftPLELRELAHsrdvdivlyeedfqfda 238
Cdd:PRK11749  281 GGNTAMDAARTAKR-----------------LGA---ESVTIVYRRGREEM---PASEEEVEH----------------- 320

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 239 ASEEAMEknaqtkvmmktlrgwledqktneqtasrrlhLHFLQSPHEILGEDGKVVGLRMERNKL-----DGNGGIIGTG 313
Cdd:PRK11749  321 AKEEGVE-------------------------------FEWLAAPVEILGDEGRVTGVEFVRMELgepdaSGRRRVPIEG 369

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1091083673 314 EYVDYPVQAVYRAIGyFGSEL------PEIGYDDKRGVItnvegrVVDENGEV-VPGLYASGWIKRG 373
Cdd:PRK11749  370 SEFTLPADLVIKAIG-QTPNPlilsttPGLELNRWGTII------ADDETGRTsLPGVFAGGDIVTG 429
gltD PRK12810
glutamate synthase subunit beta; Reviewed
 9-374 5.06e-27

glutamate synthase subunit beta; Reviewed


Pssm-ID: 237213 [Multi-domain]  Cd Length: 471  Bit Score: 112.95  E-value: 5.06e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673   9 RVAVIGAGPAGIYTADILTkseevRTGaVEVAIdiFDRYPAPFGLIRYGVaPDHPRIKGIITALHKVLDRGDIRFFGNVE 88
Cdd:PRK12810  145 KVAVVGSGPAGLAAADQLA-----RAG-HKVTV--FERADRIGGLLRYGI-PDFKLEKEVIDRRIELMEAEGIEFRTNVE 215

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673  89 YGKDLTLADLREHYDAIIFATGAIFDAPLNIKGIDLDGSYGAADFVSW----YDGHPDYPrtwPLEAE--QVAVLGNGNV 162
Cdd:PRK12810  216 VGKDITAEELLAEYDAVFLGTGAYKPRDLGIPGRDLDGVHFAMDFLIQntrrVLGDETEP---FISAKgkHVVVIGGGDT 292

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 163 ALDVsrilskhaddlLVTEIPdnvyegLKASPVTdvhvfgRRGPAQMkftPLELRelahSRDVDIVLYEEDFQFDAASEE 242
Cdd:PRK12810  293 GMDC-----------VGTAIR------QGAKSVT------QRDIMPM---PPSRR----NKNNPWPYWPMKLEVSNAHEE 342

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 243 AMEknaqtkvmmktlrgwledqktneqtasrrlhLHFLQSPHEILGEDGKVVGLRMERNKLDGNGGIIGTGEYVDYPVQA 322
Cdd:PRK12810  343 GVE-------------------------------REFNVQTKEFEGENGKVTGVKVVRTELGEGDFEPVEGSEFVLPADL 391

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1091083673 323 VYRAIGYFGselPEIGYDDKRGVITNVEGRVVDENGEV---VPGLYASGWIKRGP 374
Cdd:PRK12810  392 VLLAMGFTG---PEAGLLAQFGVELDERGRVAAPDNAYqtsNPKVFAAGDMRRGQ 443
PRK12809 PRK12809
putative oxidoreductase Fe-S binding subunit; Reviewed
 6-168 2.68e-18

putative oxidoreductase Fe-S binding subunit; Reviewed


Pssm-ID: 183762 [Multi-domain]  Cd Length: 639  Bit Score: 87.77  E-value: 2.68e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673   6 RPLRVAVIGAGPAGIYTADILTkseevRTGaveVAIDIFDRYPAPFGLIRYGVAPdHPRIKGIITALHKVLDRGDIRFFG 85
Cdd:PRK12809  309 RSEKVAVIGAGPAGLGCADILA-----RAG---VQVDVFDRHPEIGGMLTFGIPP-FKLDKTVLSQRREIFTAMGIDFHL 379

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673  86 NVEYGKDLTLADLREHYDAIIFATGAIFDAPLNIKGIDLDGSYGAADFVSWYD----GHP---DYPRTwPLEAEQVAVLG 158
Cdd:PRK12809  380 NCEIGRDITFSDLTSEYDAVFIGVGTYGMMRADLPHEDAPGVIQALPFLTAHTrqlmGLPeseEYPLT-DVEGKRVVVLG 458

                         170
                  ....*....|
gi 1091083673 159 NGNVALDVSR 168
Cdd:PRK12809  459 GGDTTMDCLR 468
PRK12771 PRK12771
putative glutamate synthase (NADPH) small subunit; Provisional
 9-374 1.35e-17

putative glutamate synthase (NADPH) small subunit; Provisional


Pssm-ID: 237198 [Multi-domain]  Cd Length: 564  Bit Score: 85.31  E-value: 1.35e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673   9 RVAVIGAGPAGIYTADILTkseevRTG-AVEvaidIFDRYPAPFGLIRYGVaPDH--PR------IKGIITAlhkvldrg 79
Cdd:PRK12771  139 RVAVIGGGPAGLSAAYHLR-----RMGhAVT----IFEAGPKLGGMMRYGI-PAYrlPRevldaeIQRILDL-------- 200

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673  80 DIRFFGNVEYGKDLTLADLREHYDAIIFATGAIFDAPLNIKGIDLDGSYGAADFVSWY-DGHPDYprtwplEAEQVAVLG 158
Cdd:PRK12771  201 GVEVRLGVRVGEDITLEQLEGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAVDFLRAVgEGEPPF------LGKRVVVIG 274

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 159 NGNVALDVSRilskhaddllvteipdnVYEGLKASPVTDVHvfgRRGPAQMKftplelrelAHsrdvdivlyeeDFQFDA 238
Cdd:PRK12771  275 GGNTAMDAAR-----------------TARRLGAEEVTIVY---RRTREDMP---------AH-----------DEEIEE 314

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 239 ASEEAmeknaqtkVMMKTLRGwledqktneqtasrrlhlhflqsPHEILGEDGKVVGLR---MERNKLDGNGGIIG-TGE 314
Cdd:PRK12771  315 ALREG--------VEINWLRT-----------------------PVEIEGDENGATGLRvitVEKMELDEDGRPSPvTGE 363

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1091083673 315 YVDYPVQAVYRAIG------YFGSelpEIGYDDKRGVItnvegrVVDENGEV--VPGLYASGWIKRGP 374
Cdd:PRK12771  364 EETLEADLVVLAIGqdidsaGLES---VPGVEVGRGVV------QVDPNFMMtgRPGVFAGGDMVPGP 422
PRK12831 PRK12831
putative oxidoreductase; Provisional
 9-373 1.90e-17

putative oxidoreductase; Provisional


Pssm-ID: 183780 [Multi-domain]  Cd Length: 464  Bit Score: 84.30  E-value: 1.90e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673   9 RVAVIGAGPAGIYTADILTKseevrtgaVEVAIDIFDRYPAPFGLIRYGVA----PDHPRIKGIITALHKVldrgDIRFF 84
Cdd:PRK12831  142 KVAVIGSGPAGLTCAGDLAK--------MGYDVTIFEALHEPGGVLVYGIPefrlPKETVVKKEIENIKKL----GVKIE 209

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673  85 GNVEYGKDLTLADLRE--HYDAIIFATGAIFDAPLNIKGIDLDGSYGAADFVS------WYDghPDYpRTwPLEA-EQVA 155
Cdd:PRK12831  210 TNVVVGKTVTIDELLEeeGFDAVFIGSGAGLPKFMGIPGENLNGVFSANEFLTrvnlmkAYK--PEY-DT-PIKVgKKVA 285

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 156 VLGNGNVALDVSRILSKhaddllvteipdnvyegLKAspvtDVHVFGRRGPAQMkftPLELRELAHSRdvdivlyEEDFQ 235
Cdd:PRK12831  286 VVGGGNVAMDAARTALR-----------------LGA----EVHIVYRRSEEEL---PARVEEVHHAK-------EEGVI 334

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 236 FDaaseeameknaqtkvmmktlrgwledqktneqtasrrlhlhFLQSPHEILG-EDGKVVGLRMERNKL---DGNGG--- 308
Cdd:PRK12831  335 FD-----------------------------------------LLTNPVEILGdENGWVKGMKCIKMELgepDASGRrrp 373

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1091083673 309 IIGTGEYVDYPVQAVYRAIG-----YFGSELPEIGYdDKRGVItnvegrVVDENG--EVVPGLYASGWIKRG 373
Cdd:PRK12831  374 VEIEGSEFVLEVDTVIMSLGtspnpLISSTTKGLKI-NKRGCI------VADEETglTSKEGVFAGGDAVTG 438
PRK12769 PRK12769
putative oxidoreductase Fe-S binding subunit; Reviewed
 9-373 2.45e-17

putative oxidoreductase Fe-S binding subunit; Reviewed


Pssm-ID: 183733 [Multi-domain]  Cd Length: 654  Bit Score: 84.80  E-value: 2.45e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673   9 RVAVIGAGPAGIYTADILtkseeVRTGaveVAIDIFDRYPAPFGLIRYGVaPDHPRIKGIITALHKVLDRGDIRFFGNVE 88
Cdd:PRK12769  329 RVAIIGAGPAGLACADVL-----ARNG---VAVTVYDRHPEIGGLLTFGI-PAFKLDKSLLARRREIFSAMGIEFELNCE 399

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673  89 YGKDLTLADLREHYDAIIFATGAIFDAPLNIKGIDLDGSYGAADF-------VSWYDGHPDYPRTwPLEAEQVAVLGNGN 161
Cdd:PRK12769  400 VGKDISLESLLEDYDAVFVGVGTYRSMKAGLPNEDAPGVYDALPFliantkqVMGLEELPEEPFI-NTAGLNVVVLGGGD 478

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 162 VALDVSRILSKHAddllvteipdnvyeglkASPVTDVHvfgRRGPAQMkftPLELRELAHSRdvdivlyEEDFQFdaase 241
Cdd:PRK12769  479 TAMDCVRTALRHG-----------------ASNVTCAY---RRDEANM---PGSKKEVKNAR-------EEGANF----- 523

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 242 eamEKNAQtkvmmktlrgwledqktneqtasrrlhlhflqsPHEI-LGEDGKVVGLRMERNKL---DGNG-----GIIGT 312
Cdd:PRK12769  524 ---EFNVQ---------------------------------PVALeLNEQGHVCGIRFLRTRLgepDAQGrrrpvPIPGS 567

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1091083673 313 gEYVdYPVQAVYRAIGYFGSELP-----EIGYDDKRGVITNVEGRVVDENGEvvPGLYASGWIKRG 373
Cdd:PRK12769  568 -EFV-MPADAVIMAFGFNPHGMPwleshGVTVDKWGRIIADVESQYRYQTSN--PKIFAGGDAVRG 629
PRK12814 PRK12814
putative NADPH-dependent glutamate synthase small subunit; Provisional
 9-230 4.45e-16

putative NADPH-dependent glutamate synthase small subunit; Provisional


Pssm-ID: 139246 [Multi-domain]  Cd Length: 652  Bit Score: 80.93  E-value: 4.45e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673   9 RVAVIGAGPAGIYTA-DILTKSEEVrtgavevaiDIFDRYPAPFGLIRYGVapdhPRIK---GIITALHKVLDRGDIRFF 84
Cdd:PRK12814  195 KVAIIGAGPAGLTAAyYLLRKGHDV---------TIFDANEQAGGMMRYGI----PRFRlpeSVIDADIAPLRAMGAEFR 261

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673  85 GNVEYGKDLTLADLREHYDAIIFATGAIFDAPLNIKGIDLDGSYGAADFV-SWYDGHPDYPrtwpleAEQVAVLGNGNVA 163
Cdd:PRK12814  262 FNTVFGRDITLEELQKEFDAVLLAVGAQKASKMGIPGEELPGVISGIDFLrNVALGTALHP------GKKVVVIGGGNTA 335

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1091083673 164 LDVSRILSKhaddllvteipdnvyegLKASPVTDVHvfgRRGPAQMKFTPLELRElAHSRDVDIVLY 230
Cdd:PRK12814  336 IDAARTALR-----------------LGAESVTILY---RRTREEMPANRAEIEE-ALAEGVSLREL 381
PRK12770 PRK12770
putative glutamate synthase subunit beta; Provisional
 6-166 6.01e-15

putative glutamate synthase subunit beta; Provisional


Pssm-ID: 237197 [Multi-domain]  Cd Length: 352  Bit Score: 75.80  E-value: 6.01e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673   6 RPLRVAVIGAGPAGIYTADILT-KSEEVrtgavevaiDIFDRYPAPFGLIRYGVAPDHPRIKGIITALhKVLDRGDIRFF 84
Cdd:PRK12770   17 TGKKVAIIGAGPAGLAAAGYLAcLGYEV---------HVYDKLPEPGGLMLFGIPEFRIPIERVREGV-KELEEAGVVFH 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673  85 ---------------GNVEYGKDLTLADLREHYDAIIFATGAIFDAPLNIKGIDLDGSYGAADFV----SWYDGHPDYPR 145
Cdd:PRK12770   87 trtkvccgeplheeeGDEFVERIVSLEELVKKYDAVLIATGTWKSRKLGIPGEDLPGVYSALEYLfrirAAKLGYLPWEK 166

                         170       180
                  ....*....|....*....|.
gi 1091083673 146 TWPLEAEQVAVLGNGNVALDV 166
Cdd:PRK12770  167 VPPVEGKKVVVVGAGLTAVDA 187
PRK13984 PRK13984
putative oxidoreductase; Provisional
 9-374 2.80e-14

putative oxidoreductase; Provisional


Pssm-ID: 172486 [Multi-domain]  Cd Length: 604  Bit Score: 75.19  E-value: 2.80e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673   9 RVAVIGAGPAGIYTADILTKseevrtgaVEVAIDIFDRYPAPFGLIRYGVA----PDHPRIKGI--ITALhkvldrgDIR 82
Cdd:PRK13984  285 KVAIVGSGPAGLSAAYFLAT--------MGYEVTVYESLSKPGGVMRYGIPsyrlPDEALDKDIafIEAL-------GVK 349

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673  83 FFGNVEYGKDLTLADLREHYDAIIFATGAIFDAPLNIKGIDLDGSYGAADFVSWYDghpDYPRT---WPLEAEQVAVLGN 159
Cdd:PRK13984  350 IHLNTRVGKDIPLEELREKHDAVFLSTGFTLGRSTRIPGTDHPDVIQALPLLREIR---DYLRGegpKPKIPRSLVVIGG 426

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 160 GNVALDVSRILSKhaddllvteipdnvyeglkaspvtdvhvfgrrgpaqmkftpleLRELAHSR-DVDIVLYEEDFQFDA 238
Cdd:PRK13984  427 GNVAMDIARSMAR-------------------------------------------LQKMEYGEvNVKVTSLERTFEEMP 463

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 239 ASEEAMEKNAQTKVMMKTLRGwledqktneqtasrrlhlhflqsPHEILGEDGKVVGLRMER------------NKLDGN 306
Cdd:PRK13984  464 ADMEEIEEGLEEGVVIYPGWG-----------------------PMEVVIENDKVKGVKFKKcvevfdeegrfnPKFDES 520

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 307 GGIIGTGEYVdypVQAVYRAIGYfgSELPEigydDKRGVITNVEGRV-VDENGEV-VPGLYASGWIKRGP 374
Cdd:PRK13984  521 DQIIVEADMV---VEAIGQAPDY--SYLPE----ELKSKLEFVRGRIlTNEYGQTsIPWLFAGGDIVHGP 581
PRK12778 PRK12778
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate ...
 9-378 8.02e-13

bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase;


Pssm-ID: 237200 [Multi-domain]  Cd Length: 752  Bit Score: 70.54  E-value: 8.02e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673   9 RVAVIGAGPAGIYTADILTKSeevrtgAVEVAidIFDRYPAPFGLIRYGVaPDHPRIKGIITALHKVLDRGDIRFFGNVE 88
Cdd:PRK12778  433 KVAVIGSGPAGLSFAGDLAKR------GYDVT--VFEALHEIGGVLKYGI-PEFRLPKKIVDVEIENLKKLGVKFETDVI 503

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673  89 YGKDLTLADLR-EHYDAIIFATGAIFDAPLNIKGIDLDGSYGAADF---VSWYDGHPDYPRTWPLEAEQVAVLGNGNVAL 164
Cdd:PRK12778  504 VGKTITIEELEeEGFKGIFIASGAGLPNFMNIPGENSNGVMSSNEYltrVNLMDAASPDSDTPIKFGKKVAVVGGGNTAM 583

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 165 DVSRILSKhaddllvteipdnvyegLKASPVTDVHvfgRRGPAQMkftPLELRELAHsrdvdivlyeedfqfdaASEEAM 244
Cdd:PRK12778  584 DSARTAKR-----------------LGAERVTIVY---RRSEEEM---PARLEEVKH-----------------AKEEGI 623

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 245 EKNaqtkvmmktlrgwledqktneqtasrrlhlhFLQSPHEILG-EDGKVVGLRMERNKL---DGNG---GIIGTGEYVD 317
Cdd:PRK12778  624 EFL-------------------------------TLHNPIEYLAdEKGWVKQVVLQKMELgepDASGrrrPVAIPGSTFT 672

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1091083673 318 YPVQAVYRAIG-----YFGSELPEIGYdDKRGVItnvegrVVDENGEV-VPGLYASGWIKRGPVGLI 378
Cdd:PRK12778  673 VDVDLVIVSVGvspnpLVPSSIPGLEL-NRKGTI------VVDEEMQSsIPGIYAGGDIVRGGATVI 732
PRK12775 PRK12775
putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin ...
 9-378 1.32e-10

putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional


Pssm-ID: 183738 [Multi-domain]  Cd Length: 1006  Bit Score: 63.81  E-value: 1.32e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673    9 RVAVIGAGPAGIYTADILTKseevrtgaVEVAIDIFDRYPAPFGLIRYGVAPDH-PRiKGIITALHKVLDRGdIRFFGNV 87
Cdd:PRK12775   432 KVAICGSGPAGLAAAADLVK--------YGVDVTVYEALHVVGGVLQYGIPSFRlPR-DIIDREVQRLVDIG-VKIETNK 501

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673   88 EYGKDLTLADLREH--YDAIIFATGAIFDAPLNIKGIDLDGSYGAADFVSWYD--GHPDYP-RTWPLE-AEQVAVLGNGN 161
Cdd:PRK12775   502 VIGKTFTVPQLMNDkgFDAVFLGVGAGAPTFLGIPGEFAGQVYSANEFLTRVNlmGGDKFPfLDTPISlGKSVVVIGAGN 581

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673  162 VALDVSRILSKhaddllvteipdnvyegLKASPVTDVHvfgRRGPAQmkfTPLELRELAHsrdvdivlyeedfqfdaASE 241
Cdd:PRK12775   582 TAMDCLRVAKR-----------------LGAPTVRCVY---RRSEAE---APARIEEIRH-----------------AKE 621

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673  242 EAMEknaqtkvmmktlrgwledqktneqtasrrlhLHFLQSPHEIL-GEDGKVVGLRMERNKL-----DGNGGIIGTGEY 315
Cdd:PRK12775   622 EGID-------------------------------FFFLHSPVEIYvDAEGSVRGMKVEEMELgepdeKGRRKPMPTGEF 670

                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1091083673  316 VDYPVQAVYRAIG-----YFGSELPEIGYdDKRGVITNVEGRVVDENGEVVPGLYASGWIKRGPVGLI 378
Cdd:PRK12775   671 KDLECDTVIYALGtkanpIITQSTPGLAL-NKWGNIAADDGKLESTQSTNLPGVFAGGDIVTGGATVI 737
PRK12779 PRK12779
putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; ...
 4-231 4.86e-09

putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional


Pssm-ID: 183740 [Multi-domain]  Cd Length: 944  Bit Score: 58.69  E-value: 4.86e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673   4 AARPlRVAVIGAGPAGIYTADILtkseevrtgAVE-VAIDIFDRYPAPFGLIRYGVapdhPRIKGIITALHKVLDRGDI- 81
Cdd:PRK12779  304 AVKP-PIAVVGSGPSGLINAYLL---------AVEgFPVTVFEAFHDLGGVLRYGI----PEFRLPNQLIDDVVEKIKLl 369

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673  82 --RFFGNVEYGKDLTLADL-REHYDAIIFATGAIFDAPLNIKGIDLDGSYGAADF---VSWYDGH-PDYPRTWP-LEAEQ 153
Cdd:PRK12779  370 ggRFVKNFVVGKTATLEDLkAAGFWKIFVGTGAGLPTFMNVPGEHLLGVMSANEFltrVNLMRGLdDDYETPLPeVKGKE 449

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1091083673 154 VAVLGNGNVALDVSRILSKHADDllvteipdnvyeglkaspVTDVHvfgRRGPAQMkftPLELRELAHSRDVDIVLYE 231
Cdd:PRK12779  450 VFVIGGGNTAMDAARTAKRLGGN------------------VTIVY---RRTKSEM---PARVEELHHALEEGINLAV 503
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
10-368 1.57e-07

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 52.81  E-value: 1.57e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673  10 VAVIGAGPAGiYTADILTKSEEVRTGavevaidIFDRyPAPFGLIR-----YGVAPDHPRIKG--IITALHKVLDRGDIR 82
Cdd:COG0492     3 VVIIGAGPAG-LTAAIYAARAGLKTL-------VIEG-GEPGGQLAttkeiENYPGFPEGISGpeLAERLREQAERFGAE 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673  83 F-FGNVE------YGKDLTLADLREHY-DAIIFATGAiFDAPLNIKGID-LDG---SYGAAdfvswYDGhPDYPrtwple 150
Cdd:COG0492    74 IlLEEVTsvdkddGPFRVTTDDGTEYEaKAVIIATGA-GPRKLGLPGEEeFEGrgvSYCAT-----CDG-FFFR------ 140

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 151 AEQVAVLGNGNVALDVSRILSKHADdllvteipdnvyeglkaspvtDVHVFGRRgpaqmkftplelrelahsrdvdivly 230
Cdd:COG0492   141 GKDVVVVGGGDSALEEALYLTKFAS---------------------KVTLIHRR-------------------------- 173

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 231 eEDFQFDAASEEAMEKNAQTKVMmktlrgwledqkTNEQtasrrlhlhflqsPHEILGeDGKVVGLRMERNKldgnggii 310
Cdd:COG0492   174 -DELRASKILVERLRANPKIEVL------------WNTE-------------VTEIEG-DGRVEGVTLKNVK-------- 218

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673 311 gTGEYVDYPVQAVYRAIGYfgseLPEIGYDDKRGVITNVEGRV-VDENGE-VVPGLYASG 368
Cdd:COG0492   219 -TGEEKELEVDGVFVAIGL----KPNTELLKGLGLELDEDGYIvVDEDMEtSVPGVFAAG 273
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
 9-174 9.07e-04

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 41.15  E-value: 9.07e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673   9 RVAVIGAGPAGIYTADILtKSEEVRTGAVEVAIDIFDRYPAPFGLIRYgvAPDHPRIKGIITALHKVLDRGDIRFFGNVE 88
Cdd:pfam07992   2 DVVVIGGGPAGLAAALTL-AQLGGKVTLIEDEGTCPYGGCVLSKALLG--AAEAPEIASLWADLYKRKEEVVKKLNNGIE 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1091083673  89 Y------------GKDLTLADLREH------YDAIIFATGAiFDAPLNIKGIDLDGSYGAADFVSWYDGHPDyprtwpLE 150
Cdd:pfam07992  79 VllgtevvsidpgAKKVVLEELVDGdgetitYDRLVIATGA-RPRLPPIPGVELNVGFLVRTLDSAEALRLK------LL 151

                         170       180
                  ....*....|....*....|....
gi 1091083673 151 AEQVAVLGNGNVALDVSRILSKHA 174
Cdd:pfam07992 152 PKRVVVVGGGYIGVELAAALAKLG 175
PRK12844 PRK12844
3-ketosteroid-delta-1-dehydrogenase; Reviewed
 344-368 2.39e-03

3-ketosteroid-delta-1-dehydrogenase; Reviewed


Pssm-ID: 183787 [Multi-domain]  Cd Length: 557  Bit Score: 40.51  E-value: 2.39e-03
                          10        20
                  ....*....|....*....|....*
gi 1091083673 344 GVITNVEGRVVDENGEVVPGLYASG 368
Cdd:PRK12844  490 GLLTDEHARVLREDGSVIPGLYATG 514
SdhA COG1053
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ...
 344-368 3.68e-03

Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle


Pssm-ID: 440673 [Multi-domain]  Cd Length: 443  Bit Score: 39.43  E-value: 3.68e-03
                          10        20
                  ....*....|....*....|....*
gi 1091083673 344 GVITNVEGRVVDENGEVVPGLYASG 368
Cdd:COG1053   382 GLRVDADARVLDADGTPIPGLYAAG 406
YdhS COG4529
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];
4-50 5.21e-03

Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];


Pssm-ID: 443597 [Multi-domain]  Cd Length: 466  Bit Score: 39.17  E-value: 5.21e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 1091083673   4 AARPLRVAVIGAGPAGIYTADILtkseeVRTGAVEVAIDIFDRYPAP 50
Cdd:COG4529     2 TGARKRIAIIGGGASGTALAIHL-----LRRAPEPLRITLFEPRPEL 43
YobN COG1231
Monoamine oxidase [Amino acid transport and metabolism];
1-28 5.52e-03

Monoamine oxidase [Amino acid transport and metabolism];


Pssm-ID: 440844 [Multi-domain]  Cd Length: 440  Bit Score: 39.13  E-value: 5.52e-03
                          10        20
                  ....*....|....*....|....*...
gi 1091083673   1 MSEAARPLRVAVIGAGPAGIYTADILTK 28
Cdd:COG1231     1 MSRRARGKDVVIVGAGLAGLAAARELRK 28
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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