|
Name |
Accession |
Description |
Interval |
E-value |
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
15-650 |
0e+00 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 726.57 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 15 GTLAAGLLGKTMGRVFTHRLLITLISISFFLSCYLFKIFVINKYPSTEGVLYTWATAGMLHFDIALLLDPLSVAMTTVVL 94
Cdd:PRK06590 15 GALILGLFGRRIGEKWAHLVGTGLVGLSALLSLVVFFDFLLGGGRAFSQTLWTWISVGDFDVDFGLRVDGLSATMLVVVT 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 95 FVSLMVHIYTVGYMADDPGYQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGFWFKRETALSGSLKAFIV 174
Cdd:PRK06590 95 GVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAFIV 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 175 NRVGDVGFVLAIAAVLMYFGTLNYHDVFQQVPdvigqrlgIFPGYEISVITMICLLLFFGAMAKSAQVPLHVWLPESMEG 254
Cdd:PRK06590 175 NRVGDVGLALGIFLLFAEFGSLNYDEVFAAAP--------QFFGLGWSALTLICLLLFIGAMGKSAQFPLHTWLPDAMEG 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 255 PTPISALIHAATMVTAGIYMVARMSPLFEFSPATLSLILVIGGTTAFFMGLLAVVQNDIKRVIAYSTISQLGYMAVALGA 334
Cdd:PRK06590 247 PTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGV 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 335 SAYDAAIFHLITHAFFKALLFLAAGSVIIALHHEQDMRKMGGLVSYMPVTYLTFIIGALALSAIPPFSGFYSKDIIIEAA 414
Cdd:PRK06590 327 GAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEAA 406
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 415 QLSilpGARYAYYCVLASAFVTPLYIFRALFMTFHTNERMDPElkgHVKESPFVVLFPLVCLAIPSVIVGQLLIGPMLFF 494
Cdd:PRK06590 407 FAN---GHINLFVAGLVGAFLTAFYSFRLIFLVFHGKEKEKIH---HPHESPAVMTLPLIVLAVLSVFAGALIVPPFLGV 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 495 HPPLLGNTIFVLPDHNVInqlsteyrganimaleAGRTLTFWLAIAGIVAAWLFTAFLPRWGENLKTRFSLLYTILLRKY 574
Cdd:PRK06590 481 LPLTTELAHGEAEHHLPV----------------WVALLPLVVALAGIALAWLLYLKKPTLPTSIAAPGRFLYTLLRNKY 544
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1085147720 575 GFDEFNQIVFVEGTKEVGHICYDVGDVKLIDGVcVNGTGRFVIWFAYVSRLLQSGYVYHYALAMVLGILVFLVWYV 650
Cdd:PRK06590 545 YFDELYEKVFVKPGLALARLLWKDGDDGIIDGL-VPNSARLVGGGSRVLRRLQTGYLRHYAASMLIGAVVLLALLL 619
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
15-648 |
0e+00 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 658.38 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 15 GTLAAGLLGKTMGRVFTHRLLITLISISFFLSCYLFKIFVINKYPSTegvLYTWATAGMLHFDIALLLDPLSVAMTTVVL 94
Cdd:COG1009 14 GALLAGLLGRRLGRRAAGWLAALAPLAAFVLSLLLFPAVLGGEVVVE---LYTWIPVGSLGLDFGFRLDGLSLLMLLLVT 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 95 FVSLMVHIYTVGYMADDPGYQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGFWFKRETALSGSLKAFIV 174
Cdd:COG1009 91 GVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLV 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 175 NRVGDVGFVLAIAAVLMYFGTLNYHDVFQQVPDVIGQrlgifpgyeiSVITMICLLLFFGAMAKSAQVPLHVWLPESMEG 254
Cdd:COG1009 171 TRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTILSS----------PLLTLILLLLLLGAFGKSAQFPLHFWLPDAMEG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 255 PTPISALIHAATMVTAGIYMVARMSPLFEFSPATLSLILVIGGTTAFFMGLLAVVQNDIKRVIAYSTISQLGYMAVALGA 334
Cdd:COG1009 241 PTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGV 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 335 SAYDAAIFHLITHAFFKALLFLAAGSVIIALhHEQDMRKMGGLVSYMPVTYLTFIIGALALSAIPPFSGFYSKDIIIEAA 414
Cdd:COG1009 321 GAYVAALFHLLTHAFFKALLFLGAGSVIHAT-GTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAA 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 415 qLSILPGARYAYYCVLASAFVTPLYIFRALFMTFHTNERmdPELKGHVKESPFVVLFPLVCLAIPSVIVGqlligpmlFF 494
Cdd:COG1009 400 -LEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPR--PKTPKHPHESPWLMTLPLVVLAVLSLVLG--------LL 468
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 495 HPPLLGNtifVLPDHNVINQLSTEYRGANIMAleagrtLTFWLAIAGIVAAWLFtaFLPRWGENLKTRFSLLYTILLRKY 574
Cdd:COG1009 469 LPGLLEG---LLAPAAVLGGELHLAHGLLLNA------LPLLLSLLGIALGYLL--YLKRPLPALAERLKPLYRLLANKW 537
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1085147720 575 GFDEFNQIVFVEGTKEVGHIcyDVGDVKLIDGVcVNGTGRFVIWFAYVSRLLQSGYVYHYALAMVLGILVFLVW 648
Cdd:COG1009 538 YFDELYDALFVKPVRALARF--LWFDRYVIDGI-VNGLARLTLFSGRLLRRLQTGYLQFYALTILLGVVVLLLL 608
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
15-641 |
0e+00 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 639.71 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 15 GTLAAGLLGKTMGRVFTHRLLITLISISFFLSCYLF-KIFVINKYPSTEGVLYTWATAGMLHFDIALLLDPLSVAMTTVV 93
Cdd:TIGR01974 13 GFLIAGLFGRRIGERVSGIIGIGSVGLSAALSAFVFvDFFLNGEGEAFTQSLFPWISVGGFQVDFGLRLDGLSLTMLVVV 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 94 LFVSLMVHIYTVGYMADDPGYQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGFWFKRETALSGSLKAFI 173
Cdd:TIGR01974 93 TGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFV 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 174 VNRVGDVGFVLAIAAVLMYFGTLNYHDVFqqvpdvigqrlGIFPGYEISVITMICLLLFFGAMAKSAQVPLHVWLPESME 253
Cdd:TIGR01974 173 VNRVGDFGLLLGIFLIFWYFGTLNFQEVF-----------ALAPGAFFSALTLICLLLFIGAMGKSAQLPLHTWLPDAME 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 254 GPTPISALIHAATMVTAGIYMVARMSPLFEFSPATLSLILVIGGTTAFFMGLLAVVQNDIKRVIAYSTISQLGYMAVALG 333
Cdd:TIGR01974 242 GPTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALG 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 334 ASAYDAAIFHLITHAFFKALLFLAAGSVIIALHHEQDMRKMGGLVSYMPVTYLTFIIGALALSAIPPFSGFYSKDIIIEA 413
Cdd:TIGR01974 322 VGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEA 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 414 AQLSILPGarYAYYCVLASAFVTPLYIFRALFMTFHTNERMDPElkGHVKESPFVVLFPLVCLAIPSVIVGQLLIGPMLF 493
Cdd:TIGR01974 402 AFASGTHS--FLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEAD--AHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEF 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 494 FHPpllgnTIFVLPDHNVINQlsteyrgaNIMALEAgrTLTFWLAIAGIVAAWLFTAFLPRWGENLKTRFSLLYTILLRK 573
Cdd:TIGR01974 478 LKG-----VLPTSAEPALEHH--------HVPALEI--WSPTAVAILGILLAYLLYLGNPTLPAKIAQRHSGLYRLLLNK 542
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1085147720 574 YGFDEFNQIVFVEGTKEVGHICYDVGDVKLIDGVcVNGTGRFVIWFAYVSRLLQSGYVYHYALAMVLG 641
Cdd:TIGR01974 543 WYFDELYDKVFVKPYLFLGKLLWKDPDDKIIDGF-GPGIARLVGAISKRLRKSQTGYLRWYAASMVVG 609
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
15-648 |
5.42e-151 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 449.91 E-value: 5.42e-151
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 15 GTLAAGLLGKTMGRVFTHRLLITLISISFFLSCYLFKIFVINkYPSTEGVLYTWATAGMLHFDIALLLDPLSVAMTTVVL 94
Cdd:MTH00020 12 GALLSGLFGRKIGEKGAGILTSSCLIISLSWSFLIFYEILFN-SSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVT 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 95 FVSLMVHIYTVGYMADDPGYQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGFWFKRETALSGSLKAFIV 174
Cdd:MTH00020 91 TVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLV 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 175 NRVGDVGFVLAIAAVLMYFGTLNYHDVFQQVPDvigqrlgifpgYEISVITMICLLLFFGAMAKSAQVPLHVWLPESMEG 254
Cdd:MTH00020 171 NRVGDIGLLLAMFLLWDRFGSLDFSSVFNMVVS-----------APSSDITLICLFLFIGAVGKSAQLGLHTWLPDAMEG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 255 PTPISALIHAATMVTAGIYMVARMSPLFEFSPATLSLILVIGGTTAFFMGLLAVVQNDIKRVIAYSTISQLGYMAVALGA 334
Cdd:MTH00020 240 PTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGL 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 335 SAYDAAIFHLITHAFFKALLFLAAGSVIIALHHEQDMRKMGGLVSYMPVTYLTFIIGALALSAIPPFSGFYSKDIIIEAA 414
Cdd:MTH00020 320 SHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELA 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 415 QLSILpgARYAYYCVLASAFVTPLYIFRALFMTFHTNERMDPELKGHVKESPFVVLFPLVCLAIPSVIVGQLLIGPMLFF 494
Cdd:MTH00020 400 FGQYY--LIFAYWLGCFSALLTAFYSIRLIYLTFLSNTNLKKAVFFHLHEGDWNLLLPLGILALGSIFVGYLAKEMIWSF 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 495 H---PPLLGNTIFVLPdhnvinqlsteyrganimaleagrtltFWLAIAGIVAAWLFTAFLPR-WGENLKTRFSLLYTIL 570
Cdd:MTH00020 478 QitlPPIVPLSIKLLP---------------------------VFLSLGGIGLVIILYFYSSKtFRVPFSFIGRNSYTFL 530
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1085147720 571 LRKYGFDEFNQIVFVEGTKEVGH-ICYDVGDVKLIDGVCVNGTGRFVIWFAYVSRLLQSGYVYHYALAMVLGILVFLVW 648
Cdd:MTH00020 531 GSAWQFNYILNYFLIKKIWKGGHlISYRTIDKGVLELVGPKGISNFLIILTQGLSSLQSGLVFNYALVILIGVAIFIWG 609
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
34-647 |
1.86e-148 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 445.62 E-value: 1.86e-148
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 34 LLITLISISFFLScYLFKIFVINKYPSTEGvLYTWATAGMLHFDIALLLDPLSVAMTTVVLFVSLMVHIYTVGYMADDPG 113
Cdd:PRK07376 43 LLISLVGAAAVLS-YALLWSQIQGHEPYER-LFEWASAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPG 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 114 YQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGFWFKRETALSGSLKAFIVNRVGDVGFVLAIAAVLMYF 193
Cdd:PRK07376 121 YVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWAT 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 194 GTLNYhdvfqqvpDVIGQRL------GIFPGyeiSVITMICLLLFFGAMAKSAQVPLHVWLPESMEGPTPISALIHAATM 267
Cdd:PRK07376 201 GSFDF--------DGIADRLselvssGAVSG---WLALLLCILVFLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATM 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 268 VTAGIYMVARMSPLFEFSPATLSLILVIGGTTAFFMGLLAVVQNDIKRVIAYSTISQLGYMAVALGASAYDAAIFHLITH 347
Cdd:PRK07376 270 VAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTH 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 348 AFFKALLFLAAGSVIIALH----HE----QDMRKMGGLVSYMPVTYLTFIIGALALSAIPPFSGFYSKDIIIeaaqlsil 419
Cdd:PRK07376 350 AYFKAMLFLGSGSVIHGMEevvgHDpvlaQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEIL-------- 421
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 420 pGARYAYYCVL-----ASAFVTPLYIFRALFMTFH-----TNERMDPELK-----------------------GHVKESP 466
Cdd:PRK07376 422 -GAAFEANPALwfvgfLTAGMTAFYMFRMYFLTFEgefrgNDKELQKELLaaadapghheghheehgehhhhsGSPHESP 500
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 467 FVVLFPLVCLAIPSVIVGqlligpmlffhppLLGntifvLPDHNVINQLSTEYRGANIMALE---------AGRTLTfwL 537
Cdd:PRK07376 501 WTMTLPLVVLAVPSVLIG-------------LLG-----TPWNNRFEAFLHAPGEALEAAAHfewgeflilAGASVG--I 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 538 AIAGIVAAWLFTAFLPRWGENLKTRFSLLYTILLRKYGFDEFNQIVFVEGTKEVGHICYDVgDVKLIDGVcVNGTGRFVI 617
Cdd:PRK07376 561 ALIGITLASLMYLLKKIDPAAIAERFPPLYQFSLNKWYLDDIYEKLFVKGSRRLARQVLEV-DYKVVDGV-VNLTGLVTL 638
|
650 660 670
....*....|....*....|....*....|
gi 1085147720 618 WFAYVSRLLQSGYVYHYALAMVLGILVFLV 647
Cdd:PRK07376 639 GSGEGLKYFENGRAQFYALIVFGAVLGLVI 668
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
19-653 |
2.23e-148 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 443.68 E-value: 2.23e-148
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 19 AGLLGKTMGRVFTHRLLITLISISFFLSCYLFKIFVINKYPsTEGVLYTWATAGMLHFDIALLLDPLSVAMTTVVLFVSL 98
Cdd:MTH00210 16 SGLFGRKIGTKGAGILTSSCIVISAIVSCCIFYETTLNGSA-TYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 99 MVHIYTVGYMADDPGYQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGFWFKRETALSGSLKAFIVNRVG 178
Cdd:MTH00210 95 LVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVG 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 179 DVGFVLAIAAVLMYFGTLNYHDVFQQVPDVIGQrlgifpgyeiSVITMICLLLFFGAMAKSAQVPLHVWLPESMEGPTPI 258
Cdd:MTH00210 175 DIGLVLAMIMILKEFGTLEFSTISSLLVTNINK----------ESLTIICLLLFIGAVGKSAQLGLHTWLPDAMEGPTPV 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 259 SALIHAATMVTAGIYMVARMSPLFEFSPATLSLILVIGGTTAFFMGLLAVVQNDIKRVIAYSTISQLGYMAVALGASAYD 338
Cdd:MTH00210 245 SALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYS 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 339 AAIFHLITHAFFKALLFLAAGSVIIALHHEQDMRKMGGLVSYMPVTYLTFIIGALALSAIPPFSGFYSKDIIIEaaqlsi 418
Cdd:MTH00210 325 TSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILE------ 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 419 LPGARY----AYYCVLASAFVTPLYIFRALFMTFHTNERMDPELKGHVKESPFVVLFPLVCLAIPSVIVG----QLLIGP 490
Cdd:MTH00210 399 LTYDKYyiafAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVFIGVHESSWNITFPLLLLAFGSIFVGylgkEVVLSN 478
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 491 MLffhPPLLGNTIFVLPdhnvinqLSTEYRGAnIMALEAGRTLTFWLAIAGIVAAWLFtaflprwgenlktrFSLLYTIL 570
Cdd:MTH00210 479 VI---PPIVPNSIKMIP-------LLFSLLGA-LLAFVIYNSMVFLIKISRRGVSIRL--------------YHVIYTFL 533
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 571 LRKYGFDEFNQIVFVEGTKEVGH-ICYDVGDVKLIDGVCVNGTGRFVIWFAYVSRLLQSGYVYHYALAMVlgilVFLVWY 649
Cdd:MTH00210 534 NSAWQFNYVINHFIVKNIWKFGHlITYRIIDRGLLEIIGPRGISKVLIKLTQKISNLQSGMVFNYALIMI----IFTTLF 609
|
....
gi 1085147720 650 VGGF 653
Cdd:MTH00210 610 ISGA 613
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
36-653 |
5.91e-128 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 395.03 E-value: 5.91e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 36 ITLISISFFLSCYLFkIFVINKYPSTEgVLYTWATAGMLHFDIALLLDPLSVAMTTVVLFVSLMVHIYTVGYMADDPGYQ 115
Cdd:CHL00025 45 ILLLSIVMIFSLNLS-IQQINGSSIYQ-YLWSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYL 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 116 RFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGFWFKRETALSGSLKAFIVNRVGDVGFVLAIAAVLMYFGT 195
Cdd:CHL00025 123 RFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGFYWITGS 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 196 LNYHDVFQQVPDVIGQRlgifpGYEISVITMICLLLFFGAMAKSAQVPLHVWLPESMEGPTPISALIHAATMVTAGIYMV 275
Cdd:CHL00025 203 FEFRDLFEIFNNLIYNN-----EVNLLFATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLV 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 276 ARMSPLFEFSPATLSLILVIGGTTAFFMGLLAVVQNDIKRVIAYSTISQLGYMAVALGASAYDAAIFHLITHAFFKALLF 355
Cdd:CHL00025 278 ARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHAYSKALLF 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 356 LAAGSVIialhH------------EQDMRKMGGLVSYMPVTYLTFIIGALALSAIPPFSGFYSKDIIIEAAQLSILPGAR 423
Cdd:CHL00025 358 LGSGSVI----HsmepivgyspdkSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILNDSWLYSPIFAI 433
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 424 YAYycvlASAFVTPLYIFRALFMTF------------------------------------------HTNERMDPELKGH 461
Cdd:CHL00025 434 IAW----STAGLTAFYMFRIYLLTFeghlrvhfqnysgkknssfysislwgkeeskkinkllllltmNNNERVSFFSKKT 509
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 462 V--------------------------KESPFVVLFPLVCLAIPSVIVGqlLIG---PMLFFHPPLLgnTIFVLPDHNVI 512
Cdd:CHL00025 510 YkidgnvrnmirsfitifgnkktfsypHESDNTMLFPLLVLVLFTLFVG--FIGipfNQEGIDLDIL--SKWLTPSINLL 585
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 513 NQLSTEyrgaNIMALEAGRTLTFWLAIA--GIVAAWLF-----TAFLPRWGENL----KTRFSLLYTILLRKYGF----- 576
Cdd:CHL00025 586 HQNSNN----SVDWYEFLTNAIFSVSIAffGIFIASFLygpvySSLQNLDLINSfvkgGPKRIFLDKIINVIYNWsynrg 661
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1085147720 577 --DEFNQIVFVEGTKEVGHICYDVgDVKLIDGVcVNGTGRFVIWFAYVSRLLQSGYVYHYALAMVLGILVFLVWYVGGF 653
Cdd:CHL00025 662 yiDAFYTISFIKGIRGLAELTHFF-DRRVIDGI-TNGVGITSFFVGEGIKYVGGGRISSYLFLYLFYVSIFLLILYFFF 738
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
35-499 |
3.27e-109 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 341.76 E-value: 3.27e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 35 LITLISISFFLscylfkifvinkYPSTEGVLYTWATAGMLHFDI--ALLLDPLSVAMTTVVLFVSLMVHIYTVGYMADDP 112
Cdd:MTH00004 45 LISLIPLTLFL------------NSGTESITTNWPWIFTTTFNIpiSFKLDQYSLMFLPIALFVTWSILEFSTWYMASDP 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 113 GYQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGFWFKRETALSGSLKAFIVNRVGDVGFVLAIAAVLMY 192
Cdd:MTH00004 113 HITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLAMT 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 193 FGTLNyhdvFQQvpdvigqrlgIFPGYEISVITMICLLLffGAMAKSAQVPLHVWLPESMEGPTPISALIHAATMVTAGI 272
Cdd:MTH00004 193 LNTWE----IQQ----------LFSPTQTPTLPLLGLIL--AATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGI 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 273 YMVARMSPLFEFSPATLSLILVIGGTTAFFMGLLAVVQNDIKRVIAYSTISQLGYMAVALGASAYDAAIFHLITHAFFKA 352
Cdd:MTH00004 257 FLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKA 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 353 LLFLAAGSVIIALHHEQDMRKMGGLVSYMPVTYLTFIIGALALSAIPPFSGFYSKDIIIEAAQLSILPGarYAYYCVLAS 432
Cdd:MTH00004 337 MLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNA--WALLLTLLA 414
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1085147720 433 AFVTPLYIFRALFMTFHTNERMDPELKGHvKESPFVVLfPLVCLAIPSVIVGQLLIGPMLFFHPPLL 499
Cdd:MTH00004 415 TSFTAAYSLRMILLVQTGFPRTPPTTPIN-ENTPTIIN-PITRLALGSILAGLLISSTILPTKTPPM 479
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
36-498 |
9.33e-109 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 341.57 E-value: 9.33e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 36 ITLISISFFLSCYLFKIFVINKYPSTEGVLYTWATAGMLHFDIALLLDPLSVAMTTVVLFVSLMVHIYTVGYMADDPGYQ 115
Cdd:MTH00208 59 ISLLKTLAFLSLINLLIWILLGCPNINISLSNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKN 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 116 RFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGFWFKRETALSGSLKAFIVNRVGDVGFVLAIAAVLMYFGT 195
Cdd:MTH00208 139 AFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNS 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 196 LNYHDVFqqvpdvigqrlgIFPGYEISVITMICLLLFFGAMAKSAQVPLHVWLPESMEGPTPISALIHAATMVTAGIYMV 275
Cdd:MTH00208 219 WNLNEIL------------SLNNSNSFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLL 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 276 ARMSPLFEFSPATLSLILVIGGTTAFFMGLLAVVQNDIKRVIAYSTISQLGYMAVALGASAYDAAIFHLITHAFFKALLF 355
Cdd:MTH00208 287 IRTSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLF 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 356 LAAGSVIIALHHEQDMRKMGGLVSYMPVTYLTFIIGALALSAIPPFSGFYSKDIIIEAAQLSILPGarYAYYCVLASAFV 435
Cdd:MTH00208 367 LCSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNL--LSIILALIATLL 444
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1085147720 436 TPLYIFRALFMTFHTNERMDPELKghVKESPFVVLFPLVCLAIPSVIVGQLLIGpMLFFHPPL 498
Cdd:MTH00208 445 TAVYSFRIIFFCFLNNPSFSPLSP--ISEENPNLTNPLLRLAIGTIISGWFFSN-FVFNLPPL 504
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
21-497 |
3.17e-106 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 333.84 E-value: 3.17e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 21 LLGKTMGRVFTHRLLITLISISFFLSCYLFKIFViNKYPSTEGVLYTWATAGMLHFDIALLLDPLSVAMTTVVLFVSLMV 100
Cdd:MTH00211 17 LLPLLLPLNNSKLHIKKAVKLSFFISLIPLLIFL-DQGLETILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSI 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 101 HIYTVGYMADDPGYQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGFWFKRETALSGSLKAFIVNRVGDV 180
Cdd:MTH00211 96 LEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDI 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 181 GFVLAIAAVLMYFGTLNYhdvfqqvpdvigqrLGIFPGYEISVITMICLLLffGAMAKSAQVPLHVWLPESMEGPTPISA 260
Cdd:MTH00211 176 GLLLSMVWLLLNLNSWEI--------------SQLFILNLDLTLFLLGLLL--AAMGKSAQFGFHPWLPSAMEGPTPVSA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 261 LIHAATMVTAGIYMVARMSPLFEFSPATLSLILVIGGTTAFFMGLLAVVQNDIKRVIAYSTISQLGYMAVALGASAYDAA 340
Cdd:MTH00211 240 LLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLA 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 341 IFHLITHAFFKALLFLAAGSVIIALHHEQDMRKMGGLVSYMPVTYLTFIIGALALSAIPPFSGFYSKDIIIEAAQLSILp 420
Cdd:MTH00211 320 FLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYL- 398
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1085147720 421 gARYAYYCVLASAFVTPLYIFRALFMTFHTNERMDPELKghVKESPFVVLFPLVCLAIPSVIVGQLLIGPMLFFHPP 497
Cdd:MTH00211 399 -NAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSP--INENYKLLKNPLKRLALGSILAGFIITSNLPPEKPE 472
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
31-499 |
3.92e-105 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 331.10 E-value: 3.92e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 31 THRLLITLISISFFLSCYLFKIFvINKYPSTEGVLYTWATAGMLHFDIALLLDPLSVAMTTVVLFVSLMVHIYTVGYMAD 110
Cdd:MTH00066 30 FHTNVKTSVKTAFFISLIPLMIF-INQGLESITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHS 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 111 DPGYQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGFWFKRETALSGSLKAFIVNRVGDVGFVLAIAAVL 190
Cdd:MTH00066 109 DPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLA 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 191 MYFGTLNyhdvFQQvpdvigqrlgIFPGYEISVITMICLLLffGAMAKSAQVPLHVWLPESMEGPTPISALIHAATMVTA 270
Cdd:MTH00066 189 MNTNSWE----LQQ----------IFLLNDNSTLPLLGLIL--AAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVA 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 271 GIYMVARMSPLFEFSPATLSLILVIGGTTAFFMGLLAVVQNDIKRVIAYSTISQLGYMAVALGASAYDAAIFHLITHAFF 350
Cdd:MTH00066 253 GIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFF 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 351 KALLFLAAGSVIIALHHEQDMRKMGGLVSYMPVTYLTFIIGALALSAIPPFSGFYSKDIIIEAAQLSILpgARYAYYCVL 430
Cdd:MTH00066 333 KAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNL--NSWALILTL 410
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1085147720 431 ASAFVTPLYIFRALFMTFHTNERMDPELKghVKESPFVVLFPLVCLAIPSVIVGQLLIGPMLFFHPPLL 499
Cdd:MTH00066 411 IATSFTAVYSFRIIYFSSMKFPRSLPLSP--INENNPLIINPIKRLAWGSIIAGLLIIFNILPMKPQIL 477
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
65-412 |
2.21e-98 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 315.74 E-value: 2.21e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 65 LYTWATAGMLHFDIALLLDPLSVAMTTVVLFVSLMVHIYTVGYMADDPGYQRFFSYVSLFTFAMLTLVLANNFLLLFFGW 144
Cdd:MTH00032 61 LYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGW 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 145 EGVGLVSYLLIGFWFKRETALSGSLKAFIVNRVGDVGFVLAIAAVLMYFGTLNYH--DVFQQVPDVI--GQRLGIFPGYE 220
Cdd:MTH00032 141 EGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLtfNGGSVGSGIMdrGYYGGGAYESP 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 221 ISVITMICLLLFFGAMAKSAQVPLHVWLPESMEGPTPISALIHAATMVTAGIYMVARMSPLFEFSPATLSLILVIGGTTA 300
Cdd:MTH00032 221 LAPFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTA 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 301 FFMGLLAVVQNDIKRVIAYSTISQLGYMAVALG-ASAYDAAIFHLITHAFFKALLFLAAGSVIIALHH-EQDMRKMGGLV 378
Cdd:MTH00032 301 FFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGiEGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTVdEQDMRKMGGLI 380
|
330 340 350
....*....|....*....|....*....|....
gi 1085147720 379 SYMPVTYLTFIIGALALSAIPPFSGFYSKDIIIE 412
Cdd:MTH00032 381 HSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILE 414
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
37-417 |
6.13e-98 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 312.56 E-value: 6.13e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 37 TLISISFFLSCYLFKIFVinkYPSTEGVL--YTWATAGMLHFDIALLLDPLSVAMTTVVLFVSLMVHIYTVGYMADDPGY 114
Cdd:MTH00108 38 TTISYAFIISLIPTMMFI---HSGQEMIIsnWHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNI 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 115 QRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGFWFKRETALSGSLKAFIVNRVGDVGFVLAIAAVLMYFG 194
Cdd:MTH00108 115 NRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLLNLN 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 195 TLNyhdvFQQvpdvigqrlgIF-PGYEISVITMICLLLffGAMAKSAQVPLHVWLPESMEGPTPISALIHAATMVTAGIY 273
Cdd:MTH00108 195 SWD----LQQ----------IFmLNPNNSNLPLMGLLL--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVF 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 274 MVARMSPLFEFSPATLSLILVIGGTTAFFMGLLAVVQNDIKRVIAYSTISQLGYMAVALGASAYDAAIFHLITHAFFKAL 353
Cdd:MTH00108 259 LLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAM 338
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1085147720 354 LFLAAGSVIIALHHEQDMRKMGGLVSYMPVTYLTFIIGALALSAIPPFSGFYSKDIIIEAAQLS 417
Cdd:MTH00108 339 LFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTS 402
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
37-419 |
1.26e-95 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 306.76 E-value: 1.26e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 37 TLISISFFLSCYLFKIFVinkYPSTEGVLYTWATAGMLHFDIALLL--DPLSVAMTTVVLFVSLMVHIYTVGYMADDPGY 114
Cdd:MTH00137 42 TAVKTAFFVSLLPLFLFL---NQGAETIITNWNWMNTLTFDINISFkfDHYSIIFTPIALYVTWSILEFASWYMHADPNM 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 115 QRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGFWFKRETALSGSLKAFIVNRVGDVGFVLAIAAVLMYFG 194
Cdd:MTH00137 119 NRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGLILAMAWMATNLN 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 195 TLNYHDVFQQVPDVigqrlgifpgyeisVITMICLLLFFGAMAKSAQVPLHVWLPESMEGPTPISALIHAATMVTAGIYM 274
Cdd:MTH00137 199 SWEIQQIFALSKDF--------------DLTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFL 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 275 VARMSPLFEFSPATLSLILVIGGTTAFFMGLLAVVQNDIKRVIAYSTISQLGYMAVALGASAYDAAIFHLITHAFFKALL 354
Cdd:MTH00137 265 LIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAML 344
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1085147720 355 FLAAGSVIIALHHEQDMRKMGGLVSYMPVTYLTFIIGALALSAIPPFSGFYSKDIIIEAAQLSIL 419
Cdd:MTH00137 345 FLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHL 409
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
34-499 |
6.44e-79 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 261.61 E-value: 6.44e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 34 LLITLISISFFLSCYLFKIFVInkypstegVLYTWATAGMLHFDI--ALLLDPLSVAMTTVVLFVSLMVHIYTVGYMADD 111
Cdd:MTH00165 10 FLFFLSLILFFLGLYFLLNDYS--------LFIEWELFSLNSSSIvmTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGD 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 112 PGYQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGFWFKRETALSGSLKAFIvNRVGDVGFVLAIAaVLM 191
Cdd:MTH00165 82 KNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALS-NRIGDVAILLSIA-WMM 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 192 YFGTLNYHDVfqqvpdvigqrLGIFPGYEISVitMICLLLFFGAMAKSAQVPLHVWLPESMEGPTPISALIHAATMVTAG 271
Cdd:MTH00165 160 NFGSWNFIFY-----------LDFMKNSFEML--LIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAG 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 272 IYMVARMSPLFeFSPATLSLILVIGGTTAFFMGLLAVVQNDIKRVIAYSTISQLGYMAVALGASAYDAAIFHLITHAFFK 351
Cdd:MTH00165 227 VYLLIRFNNLL-FSSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFK 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 352 ALLFLAAGSVIIALHHEQDMRKMGGLVSYMPVTYLTFIIGALALSAIPPFSGFYSKDIIIEAAQLSILPGarYAYYCVLA 431
Cdd:MTH00165 306 ALLFLCAGSIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNF--FIFFLFFF 383
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1085147720 432 SAFVTPLYIFRALFMTFHTNERMdpELKGHVKESPFVVLFPLVCLAIPSVIVGQLLIGpMLFFHPPLL 499
Cdd:MTH00165 384 STGLTVSYSFRLIYYSMSGDFNL--KSLNNLSDESKFMLKSMILLLFMSIFGGSMLSW-LIFPEPYMI 448
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
72-507 |
3.98e-76 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 254.00 E-value: 3.98e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 72 GMLHFDIALLLDPLSVAMTTVVLFVSLMVHIYTVGYMADDPGYQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVS 151
Cdd:MTH00151 42 SSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVS 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 152 YLLIGFWFKRETaLSGSLKAFIVNRVGDVGFVLAIAAVLMYfgtlnyhdvfqqvpdviGQrLGIFPGYEISVITMICLLL 231
Cdd:MTH00151 122 FALVIYYQNKKS-LSAGMLTALTNRIGDVLILLSIALLVLL-----------------GH-WSILSMWDFKLSGWLGLLL 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 232 FFGAMAKSAQVPLHVWLPESMEGPTPISALIHAATMVTAGIYMVARMSPLFEFSPATLSLILVIGGTTAFFMGLLAVVQN 311
Cdd:MTH00151 183 VLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLLFISLLTLLMAGISACYEN 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 312 DIKRVIAYSTISQLGYMAVALGASAYDAAIFHLITHAFFKALLFLAAGSVIIALHHEQDMRKMGGLVSYMPVTYLTFIIG 391
Cdd:MTH00151 263 DLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLLGSLFLSLPLTSGCLNIS 342
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 392 ALALSAIPPFSGFYSKDIIIEAAQLSilPGARYAYYCVLASAFVTPLYIFRALFMTFHTNERMDPeLKGHVKESPFVVlF 471
Cdd:MTH00151 343 SLSLCGAPFLSGFYSKDLILESSLMS--PTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSS-LSSKSDEDFYVS-L 418
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 1085147720 472 PLVCLAIPSVIVGQLLIGPML-----FFHPPLLGNTIFVLP 507
Cdd:MTH00151 419 PMLLLSLGALIGGKLLQSLFEgfseeFFLPSYLKLLIGFVI 459
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
36-448 |
2.91e-75 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 251.49 E-value: 2.91e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 36 ITLISISFFLSCYLFKIFVINKypstEGVLYTWA--TAGMLHFDIALLLDPLSVAMTTVVLFVSLMVHIYTVGYMADDPG 113
Cdd:MTH00209 6 MFSLMLLFLFSFLMFVIFMWFQ----KIVILEWEllSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKF 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 114 YQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGFwFKRETALSGSLKAFIVNRVGDVGFVLAIAAVLMyF 193
Cdd:MTH00209 82 KKRFILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIY-YQNSKSLSAGMLTALTNRVGDALLILSIAWMLM-H 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 194 GTLNYhdvfqqvpdvigqrlgIFPGYEISVITMICLLLFFGAMAKSAQVPLHVWLPESMEGPTPISALIHAATMVTAGIY 273
Cdd:MTH00209 160 GNWNI----------------FYLNFNSNLGSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVY 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 274 MVARMSPLFEFSPATLSLILVIGGTTAFFMGLLAVVQNDIKRVIAYSTISQLGYMAVALGASAYDAAIFHLITHAFFKAL 353
Cdd:MTH00209 224 LLIRFFPSLFSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKAL 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 354 LFLAAGSVIIALHHEQDMRKMGGLVSYMPVTYLTFIIGALALSAIPPFSGFYSKDIIIEAAQLSILPGAryAYYCVLASA 433
Cdd:MTH00209 304 LFICAGNIIHSHGHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIM--TLILMFLST 381
|
410
....*....|....*
gi 1085147720 434 FVTPLYIFRALFMTF 448
Cdd:MTH00209 382 SLTAAYSMRLSYFSL 396
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
17-447 |
2.41e-73 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 242.36 E-value: 2.41e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 17 LAAGLLGKTMGRVFTHRLLITLISISFFLSCYLFKIFVINKYPSTEGVLYTWAtagmLHFDIALLLDPLSVAMTTVVLFV 96
Cdd:COG0651 13 LLAAALLLLLGRRRRLQRALSLLASLALLALALALLLQVLAGGPLVYALGGWP----APFGIVLVADRLSALFLLLTALV 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 97 SLMVHIYTVGYMADDPGYQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGFWFKREtALSGSLKAFIVNR 176
Cdd:COG0651 89 ALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKE-ALRAGLKYLILNL 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 177 VGDVGFVLAIAAVLMYFGTLNYHDVFQQVPDVigqrlgifpgyEISVITMICLLLFFGAMAKSAQVPLHVWLPESM-EGP 255
Cdd:COG0651 168 VGSALFLLGVGLLYGATGTLNMADLAARLAEL-----------DPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYpAAP 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 256 TPISALIHAAtMVTAGIYMVARMSPLF---EFSPATLSLILVIGGTTAFFMGLLAVVQNDIKRVIAYSTISQLGYMAVAL 332
Cdd:COG0651 237 SPVSALLSGL-LTKVGVYAILRVLTLLfgaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGL 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 333 G---ASAYDAAIFHLITHAFFKALLFLAAGSVIIALHHeQDMRKMGGLVSYMPVTYLTFIIGALALSAIPPFSGFYSKDI 409
Cdd:COG0651 316 GlgtPLGLAGALFHLLNHALAKALLFLAAGAIERATGT-RDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWL 394
|
410 420 430
....*....|....*....|....*....|....*...
gi 1085147720 410 IIEAAqlsILPGARYAYYCVLASAFVTPLYIFRALFMT 447
Cdd:COG0651 395 LLQAA---LEAGAWLLAAVLLLSSLLTLAYFVRIFGRA 429
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
134-414 |
1.05e-70 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 231.05 E-value: 1.05e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 134 ANNFLLLFFGWEGVGLVSYLLIGFWFKRETALSGSLKAFIVNRVGDVGFVLAIAAVLMYFGTLNYHDVFqqvpdvigqrL 213
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELS----------K 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 214 GIFPGYEISVITMICLLLFFGAMAKSAQVPLHVWLPES-MEGPTPISALIhAATMVTAGIYMVARMSPLFEF-SPATLSL 291
Cdd:pfam00361 71 ALTGGLNSSGLLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPsSPFIQQI 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 292 ILVIGGTTAFFMGLLAVVQNDIKRVIAYSTISQLGYMAVALGAS---AYDAAIFHLITHAFFKALLFLAAGSVIIALHHE 368
Cdd:pfam00361 150 LLILAIISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGtiyGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHT 229
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1085147720 369 QDMRKMGGLVSYMPVTYLTFIIGALALSAIPPFSGFYSKDIIIEAA 414
Cdd:pfam00361 230 RNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAA 275
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
73-555 |
4.98e-68 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 237.13 E-value: 4.98e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 73 MLHFDIA--LLLDPLSVAMTTVVLFVSLMVHIYTVGYMADDP-GYQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGL 149
Cdd:PRK12645 65 IPSLGINftLYVDGLSLLFALLITGIGSLVVLYSIYYLSKKKeQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSI 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 150 VSYLLIGFWFKRETALSGSLKAFIVNRVGdvGFVLAIAAVLMYF--GTLNYHDVFQQVPDVIGQRLGIFpgyeisviTMI 227
Cdd:PRK12645 145 SSFLLISYWYEREASRYGAQKSMLITVFG--GLSMLGGFILLYImtGSFSIREMIANADEIQNSPLFIP--------AMI 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 228 CLLLffGAMAKSAQVPLHVWLPESMEGPTPISALIHAATMVTAGIYMVARMSPLFEFSPATLSLILVIGGTTAFFMGLLA 307
Cdd:PRK12645 215 LILL--GAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNA 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 308 VVQNDIKRVIAYSTISQLGYMAVALG----------------ASAYDAAIFHLITHAFFKALLFLAAGSViialHHE--- 368
Cdd:PRK12645 293 VKQTDLKGILAFSTVSQLGLIMSLLGigaaslhyqgddskiyAAAITAAIFHLINHATFKGSLFMIVGIV----DHEtgt 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 369 QDMRKMGGLVSYMPVTYLTFIIGALALSAIPPFSGFYSKDIIIEA----AQLSILP----GARYAYYCVLASAFvTPLYI 440
Cdd:PRK12645 369 RDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFESmlnaTEANLFSldtwGVLFPVIAWVASVF-TFVYS 447
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 441 FRALFMTFHTNERMDpELKGHVKESPFVVLfplvclaIPSVIVGQLLIGpmLFFHPPLLGNTIF------VLPDHNVINQ 514
Cdd:PRK12645 448 IIFIFKTFFGKYKPE-QLPKKAHEAPIGML-------ISPIILASLVVV--FGLFPNILTNSIIepavsaILPTLIDGED 517
|
490 500 510 520
....*....|....*....|....*....|....*....|.
gi 1085147720 515 LSTEyrganiMALEAGRTLTFWLAIAGIVAAWLFTAFLPRW 555
Cdd:PRK12645 518 FDVH------ISLWHGFTPELLMTLGIIILGILLFLTFSKW 552
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
33-414 |
3.30e-67 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 230.42 E-value: 3.30e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 33 RLLITLISISFFLSCYLFkifVINKYPSTEGVLYTWATAGMLhfdIALLLDPLSVAMTTVVLFVSLMVHIYTVGYMADDP 112
Cdd:MTH00207 12 YLLWFMSILMFPLSLYLM---MCNKTILIEWEIFTISSSPIN---FTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDK 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 113 GYQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIgFWFKRETALSGSLKAFIVNRVGDVGFVLAIAAvlmy 192
Cdd:MTH00207 86 FLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIGDVMLLLSIGW---- 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 193 fgTLNyhdvfqqvpdviGQRLGIFPGYEISVITMICLLLFFGAMAKSAQVPLHVWLPESMEGPTPISALIHAATMVTAGI 272
Cdd:MTH00207 161 --TLN------------QGHWSITNMWQTDMNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGV 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 273 YMVARMSPLFEFSPATLSLILVIGGTTAFFMGLLAVVQNDIKRVIAYSTISQLGYMAVALGASAYDAAIFHLITHAFFKA 352
Cdd:MTH00207 227 FLLIRFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKA 306
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1085147720 353 LLFLAAGSVIIALHHEQDMRKMGGLVSYMPVTYLTFIIGALALSAIPPFSGFYSKDIIIEAA 414
Cdd:MTH00207 307 LLFVCAGSLIHSHHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESS 368
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
66-406 |
1.04e-66 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 229.80 E-value: 1.04e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 66 YTWATAGMLHFDIALLLDPLSVAMTTVVLFVSLMVHIYTVGYMADDPGYQRFFSYVSLFTFAMLTLVLANNFLLLFFGWE 145
Cdd:PRK07390 71 FPWLQVADLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLE 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 146 GVGLVSYLLIGFWFKRETALSGSLKAFIVNRVGDVGFVLAIAAVLMYFGTLNYHDVFQ-----QVPDVigqrlgifpgye 220
Cdd:PRK07390 151 ILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLAAwaataNLDPL------------ 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 221 isVITMICLLLFFGAMAKSAQVPLHVWLPESMEGPTPISALIHAAtMVTAGIYMVARMSPLFEFSPATLSLILVIGGTTA 300
Cdd:PRK07390 219 --TATLLGLALIAGPTGKCAQFPLHLWLDEAMEGPNPASILRNSV-VVATGAWVLIKLQPVLALSPVALTVLIVIGTVTA 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 301 FFMGLLAVVQNDIKRVIAYSTISQLGYMAVALGASAYDAAIFHLITHAFFKALLFLAAGSvIIALHHEQDMRKMGGLVSY 380
Cdd:PRK07390 296 IGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGS-IILTTITQDLTELGGLWSR 374
|
330 340
....*....|....*....|....*.
gi 1085147720 381 MPVTYLTFIIGALALSAIPPFSGFYS 406
Cdd:PRK07390 375 MPATTLAFLVGSAGLVALLPLGGFWA 400
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
30-492 |
5.30e-65 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 228.96 E-value: 5.30e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 30 FTHRLLITLISISFFLSCYLFKIFVINKYPSTEGVLYTWATAGMLHFDIALLLDPLSVAMTTVVLFVSLMVHIYTVGYMA 109
Cdd:TIGR00940 21 SDQRIHIGWFVLAIPLVCFLYTLGLYPYTASGGVLHYTIDWVPELGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLS 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 110 DDPGYQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGFWFKRETALSGSLKAFIVNRVGDVGFVLAIAAV 189
Cdd:TIGR00940 101 KEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGAQKSLTITVFGGLAMLGGLILL 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 190 LMYFGTLNYHDVFQQVPDVIGQRLGIFpgyeisvitmICLLLFFGAMAKSAQVPLHVWLPESMEGPTPISALIHAATMVT 269
Cdd:TIGR00940 181 GKITGSFSIDAVIASADAIRNSPLFGT----------AMVLVLLGAFTKSAQFPFHIWLPDAMEAPTPVSAYLHSATMVK 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 270 AGIYMVARMSPLFEFSPATLSLILVIGGTTAFFMGLLAVVQNDIKRVIAYSTISQLGYMAVALG---------------- 333
Cdd:TIGR00940 251 AGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGlgspsyhyqgddskiy 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 334 ASAYDAAIFHLITHAFFKALLFLAAGsviiALHHE---QDMRKMGGLVSYMPVTYLTFIIGALALSAIPPFSGFYSKDI- 409
Cdd:TIGR00940 331 ALAAVAAVFHLINHATFKGSLFMAAG----IIDHEtgtRDIRKLGGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMf 406
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 410 ---IIEAAQLSIL----PGARYAYYCVLASAFvTPLYIFRALFMTFhTNERMDPELKGHVKESPFVVLFPLVCLAIPSVI 482
Cdd:TIGR00940 407 faeAITAHLVNPFdtvtLGYLFPYVATVASVF-TFVYSLRFIHGVF-FGRPKPEDLPRKPHEPPRWMLASPDILVLLVLV 484
|
490
....*....|...
gi 1085147720 483 VG---QLLIGPML 492
Cdd:TIGR00940 485 FGlfpAQLTGPII 497
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
74-484 |
4.07e-62 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 220.18 E-value: 4.07e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 74 LHFDIALLLDPLSVAMTTVVLFVSLMVHIYTVGYMADDPGYQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYL 153
Cdd:PRK12647 54 LGVNLSFLLDGLSLTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFL 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 154 LIGFWFKRETALSGSLKAFIVNRVGdvGFVLAIAAVLMYF--GTLNYHDVFQQvPDVIGQRlgifPGYeisviTMICLLL 231
Cdd:PRK12647 134 LIGFNHEREAARRAALQALLVTGGG--GLALLAGLILLGNvtGTYSLSELLAS-GDVIREH----PLY-----LAILLLV 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 232 FFGAMAKSAQVPLHVWLPESMEGPTPISALIHAATMVTAGIYMVARMSPLFEFSPATLSLILVIGGTTAFFMGLLAVVQN 311
Cdd:PRK12647 202 LGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQT 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 312 DIKRVIAYSTISQLGYMAVALGAS---AYDAAIFHLITHAFFKALLFLAAGsviiALHHE---QDMRKMGGLVSYMPVTY 385
Cdd:PRK12647 282 DLKLILAYSTVSALGTLVMLLGLGselAIKAAVLFLVAHSLYKGALFMVAG----IIDHEtgtRDITKLGGLRRAMPITA 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 386 LTFIIGALALSAIPPFSGFYSKDIIIEA------AQLSILPGARYAYYCVLASAFVTPLYIFRAlfmtfhtneRMDPELK 459
Cdd:PRK12647 358 AAALLAALSMAGLPPLFGFLAKELIYEAlleaplWSLILTVAAVLGNALMVAVAFLVGIKPFLG---------KLVETPK 428
|
410 420
....*....|....*....|....*
gi 1085147720 460 gHVKESPFVVLFPLVCLAIPSVIVG 484
Cdd:PRK12647 429 -HPHEAPVLMWLGPAVLAVLGLLFG 452
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
77-492 |
2.81e-61 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 220.45 E-value: 2.81e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 77 DIALLLDPLSVAMTTVVLFVSLMVHIYTVGYMADDPGYQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIG 156
Cdd:PRK12648 69 NLSLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIG 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 157 FWFKRETALSGSLKAFIVNRVGdvGFVLaIAAVLMyfgtlnyhdvfqqvpdvIGQRLGifpGYEISVI------------ 224
Cdd:PRK12648 149 YWHHRADARRGARMALTVTGAG--GLAL-LAGVLL-----------------LGHIVG---SYDLDVVlaagdlirahpl 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 225 ---TMICLLLffGAMAKSAQVPLHVWLPESMEGPTPISALIHAATMVTAGIYMVARMSPLFEFSPATLSLILVIGGTTAF 301
Cdd:PRK12648 206 yppALVLILL--GAFTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLL 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 302 FMGLLAVVQNDIKRVIAYSTISQLGYMAVALGAS---AYDAAIFHLITHAFFKALLFLAAGsvIIalHHE---QDMRKMG 375
Cdd:PRK12648 284 LGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGsplAAVAAIFHIINHATFKASLFMAAG--II--DHEtgtRDMRRLS 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 376 GLVSYMPVTYLTFIIGALALSAIPPFSGFYSKDIII-EAAQLSILPGARYA--YYCVLASAFvTPLYIFRALFMTFHTNE 452
Cdd:PRK12648 360 GLRRLMPITATLAMVAAAAMAGVPLLNGFLSKEMFFaETLDTHLLGSLDWLlpVAATLAGAF-SVAYSLRFIHDVFFGPP 438
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1085147720 453 RMDPELKGHvkESPFVVLFPLVCLAIPSVIVG---QLLIGPML 492
Cdd:PRK12648 439 PDDLPKTPH--EPPRWMRAPVELLVLLCLLVGifpALTVGPLL 479
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
64-554 |
2.20e-60 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 217.87 E-value: 2.20e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 64 VLYTWATAgmLHFDIALLLDPLSVAMTTVVLFVSLMVHIYTVGYMADD-PGYQRFFSYVSLFTFAMLTLVLANNFLLLFF 142
Cdd:PRK12644 56 EVVPWIPS--LGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDePRLGRFAAELVAFAGAMFGLVTSDNLLLLYV 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 143 GWEGVGLVSYLLIGFWFKRETALSGSLKAFIVNRVGD----VGFV-LAIAAvlmyfGTLNYHDVFQQVPDVIGqrlgifp 217
Cdd:PRK12644 134 FWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGlamlVGIIiLGQAA-----GTYRLSELLADPPTGPA------- 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 218 gyeisvITMICLLLFFGAMAKSAQVPLHVWLPESMEGPTPISALIHAATMVTAGIYMVARMSPLFEFSPATLSLILVIGG 297
Cdd:PRK12644 202 ------VSVAVVLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGL 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 298 TTAFFMGLLAVVQNDIKRVIAYSTISQLGYMAVALGASAYDAA---IFHLITHAFFKALLFLAAGsVIIALHHEQDMRKM 374
Cdd:PRK12644 276 ATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAAlagLAMLLAHALFKAALFLVVG-IIDHSTGTRDIRKL 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 375 GGLVSYMPVTYLTFIIGALALSAIPPFSGFYSKdiiiEAAQLSIL------PGARYAYYCVLASAFVTPLYIFRALFMTF 448
Cdd:PRK12644 355 SGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK----EAALEAVLhdgalgPAGPVVLAGIVLGSILTVAYSLRFLWGAF 430
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 449 HTNERMDPELK-GHVKESPFVVLFPLVCLAIPSVIVGQLligpmlffhPPLLGNTIFVLPDhnvinQLSTEYRGANIMAL 527
Cdd:PRK12644 431 ARKPGAFPSVAvTEMHRPSPLFLAPPAVLAVLGLVLGLL---------PAPLDALLAPYAD-----TVPAAGGEPYHLAL 496
|
490 500
....*....|....*....|....*..
gi 1085147720 528 EAGRTLTFWLAIAGIVAAwlFTAFLPR 554
Cdd:PRK12644 497 WHGFTLPLLLSAVVLAAG--AALFWAR 521
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
41-484 |
1.03e-59 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 213.92 E-value: 1.03e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 41 ISFFLSCYLFKIFVINKYPSTEGV-------LYTWATAGMLHFDIalLLDPLSVAMTTVVLFVSLMVHIYTVGYMADDPG 113
Cdd:PRK12649 32 IGWFAAAIAFTSFALIAQVAPEVIhgtiitgSISWLPSAGVEFSI--YADGLAVLIGLIASGIGVIIMSYSNGYMSHKED 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 114 YQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGFWFKRETALSGSLKAFIVNRVGDVGFVLAIAAVLMYF 193
Cdd:PRK12649 110 LPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVIT 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 194 GTLNYHDVFQQvpdviGQRLGIFPGYEISVITMIclLLFFGAMAKSAQVPLHVWLPESMEGPTPISALIHAATMVTAGIY 273
Cdd:PRK12649 190 GTYDIATILQD-----SELIENIKGHPLFLITLI--LIFIGAAAKSAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVY 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 274 MVARMSPLFEFSPATLSLILVIGGTTAFFMGLLAVVQNDIKRVIAYSTISQLGYMAVALGASAYD-------AAIFHLIT 346
Cdd:PRK12649 263 LVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYHepglgvaAATFHLLN 342
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 347 HAFFKALLFLAAGSVIialhHE---QDMRKMGGLVSYMPVTYLTFIIGALALSAIPPFSGFYSKDIIIEAA-QLSILPGA 422
Cdd:PRK12649 343 HATFKACLFLVAGIVA----HEaatRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYETSvEMGALIGG 418
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1085147720 423 RYAYYcVLASAFVTPLYIFR---ALFMTFHTNERMDPELKGHVKESPFVVLFPLVCLAIPSVIVG 484
Cdd:PRK12649 419 PFTII-IPAVAVLGGVFTFAysiKLIDGIFLGERTHDHLPHHIHEAPYVMLIPAAFLAGLVILFG 482
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
80-414 |
2.96e-59 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 206.36 E-value: 2.96e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 80 LLLDPLSVAMTTVVLFVSLMVHIYTVGYMADD----PGYQ---RFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSY 152
Cdd:PRK06525 71 LVIDPVSVLIGFVVVLLGLLVTLYSTGYMSPGnrehPVHEgtgRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSW 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 153 LLIGFwFKRETALSGSLKAFIVNRVGDVGFVLAIAAVLMYFGTLNyhdvfqqvpdvigqrLGIFPGYEISVITMICLLLF 232
Cdd:PRK06525 151 ALISY-YQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFA---------------LSALSGLHGSLKYLVFLGIL 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 233 FGAMAKSAQVPLHVWLPESMEGPTPISALIHAATMVTAGIYMVAR----MSPLFEFSPATLSLILVIGGTTAFFMGLLav 308
Cdd:PRK06525 215 FAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARaiqsMGPIPHVIGYVGAVMAIVTLLYGFLMYLP-- 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 309 vQNDIKRVIAYSTISQLGYMAVALGAS------AYDAAIFHLITHAFFKALLFLAAGSVIIALhHEQDMRKMGGLVSYMP 382
Cdd:PRK06525 293 -QQDMKRLLAYSTITQLGYMFFGLSLAilgsrlALEGSIAYIFNHAFAKSLFFLVAGALSYSC-GTRLLPRLRGVLKKLP 370
|
330 340 350
....*....|....*....|....*....|..
gi 1085147720 383 VTYLTFIIGALALSAIPPFSGFYSKDIIIEAA 414
Cdd:PRK06525 371 LVGVGFCVAALAITGVPPFNGFFSKFPIFAAG 402
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
17-484 |
3.30e-57 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 208.74 E-value: 3.30e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 17 LAAGLLGKTMGRVFTHRLLITLISisffLSCYLFKIFVINKYPSTEGVLYTW-----ATAGMLHFdiALLLDPLSVAMTT 91
Cdd:PRK12650 13 VLAPPLVRVLDRKAGWPLAAIFVA----AAGLLLKELPPILDGDALTWSVTWipdllGNGVDVNL--ALRADALSLFFAL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 92 VVLFVSLMVHIYTVGYMADDPGYQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGFwfKRETALSGSLKA 171
Cdd:PRK12650 87 LALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIAR--SGSGGEAGSIRT 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 172 FIVNRVGDVGFVLAIAAVLMYFGTLNYHDVFqqVPDVIGQRLGIfpgyeisvITMICLLLFFGAMAKSAQVPLHVWLPES 251
Cdd:PRK12650 165 LILTFFGGLTLLAAVAIAATQTGTTSLSGIL--HSDVWAEKPGL--------TTVVAVLIAVAAFTKSAQFPFHFWLPEA 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 252 MEGPTPISALIHAATMVTAGIYMVARMSPLFEFSPATLSLILVIGGTTAFFMGLLAVVQNDIKRVIAYSTISQLGYMAVA 331
Cdd:PRK12650 235 MAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVAT 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 332 LGAS---AYDAAIFHLITHAFFKALLFLAAGSViialHHE---QDMRKMGGLVSYMPVTYLTFIIGALALSAIPPFSGFY 405
Cdd:PRK12650 315 IGVGtpfALTAAVVHTLAHALFKSSLFMLIGVV----DHQagtRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFV 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 406 SKDIIIEAAQLSilPGARYAYYCVLASAFVTPLYIF----RALFMTFHTNERMDpelkGHVKESPFVVLFPLVCLAIPSV 481
Cdd:PRK12650 391 SKEGMLTAFLEA--PGGNAGVVLLLVGAALGAVFTFaysaRLVLGAFVDGPRDM----SHVKEAPVSLWLPAALPGALSL 464
|
...
gi 1085147720 482 IVG 484
Cdd:PRK12650 465 PLG 467
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
74-518 |
1.58e-53 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 196.51 E-value: 1.58e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 74 LHFDIALLLDPLSVAMTTVVLFVSLMVHIYTVGYMADD-PGYQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSY 152
Cdd:PRK12646 68 LDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRkDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSF 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 153 LLIGFWFKRETALSGSLKAFIVNRVGDVGFVLAIAAVLMYFGTLNYHDVFQQVPDVIGQRLGIFpgyeisviTMICLLLf 232
Cdd:PRK12646 148 LLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHIKNHGLFIP--------MIFMFLL- 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 233 fGAMAKSAQVPLHVWLPESMEGPTPISALIHAATMVTAGIYMVARMSPLFEFSPATLSLILVIGGTTAFFMGLLAVVQND 312
Cdd:PRK12646 219 -GAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWD 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 313 IKRVIAYSTISQLGYMAVALG-------------ASAYD----AAIFHLITHAFFKALLFLAAGsviiALHHE---QDMR 372
Cdd:PRK12646 298 LKGILAYSTISQLGMIMAMVGigggyaqhqqdaiASIYVfvlfAALFHLMNHAIFKCALFMGVG----IIDHEagtRDIR 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 373 KMGGLVSYMPVTYLTFIIGALALSAIPPFSGFYSKDII-------IEAAQLSILPGARYAYYCVLAS--AFVTPLYIFRA 443
Cdd:PRK12646 374 ILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFldaltqtGQLSQFSLISMIIIVFIGVIASifTFTYALYMVKE 453
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1085147720 444 LFMTFHTNERMdPELKGHvkeSPFVvlfplvcLAIPSVIVGQLLigPMLFFHPPLLGNTIfVLPDHNVINQLSTE 518
Cdd:PRK12646 454 VFWGKYDSKVF-TKKNIH---EPWL-------FSLPSLILMVLV--PVIFFVPNIFGKGI-IVPALRSVSGGNHQ 514
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
75-488 |
1.24e-49 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 180.94 E-value: 1.24e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 75 HFDIALLLDPLSVAMTTVVLFVSLMVHIYTVGYMADDPGYQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLL 154
Cdd:PRK12667 73 PIGIVYEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGL 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 155 IGFWFKRETALSGSLKAFIVNRVGDVGFVLAIAAVLMYFGTLNYHDVFQQVPDVIGQRLGIFPGYEISVITMICLLLFFG 234
Cdd:PRK12667 153 VAYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLSAKIRGLSFPLTGGLAGNPPLALGVALALALWA 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 235 AMAKSAQVPLHVWLPESM-EGPTPISALIhAATMVTAGIYMVARM--------SPLFEFSPATLSLILVIGGTTAFFMGL 305
Cdd:PRK12667 233 FTIKAAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFlytifgisPSLIDFRAALSPILIILGAVSAIIGAL 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 306 LAVVQNDIKRVIAYSTISQLGYMAVALGAS---AYDAAIFHLITHAFFKALLFLAAGsVIIALHHEQDMRKMGGLVSYMP 382
Cdd:PRK12667 312 MMVVQKDVKRLLAYSTISHMGYIFMGIGIGtqlGLAAALFHIINHAIAKSLLFLASG-VFIHAAGTRDIDELAGLGRKMP 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 383 VTYLTFIIGALALSAIPPFSGFYSKDIIIEAA-QLSILPGARYAyycVLASAFvTPLYIFRALFMTFHtnERMDPELKGH 461
Cdd:PRK12667 391 IASFAFLIGALSLVGIPPLNGFFSKLLLFNALlESGFYLPALVL---LIASAI-SLVGYFRAWYSLFF--GKPKSGEEVE 464
|
410 420
....*....|....*....|....*..
gi 1085147720 462 VKESPFVVlFPLVCLAIPSVIVGQLLI 488
Cdd:PRK12667 465 HKESPSMS-VVILVLALAVLILGILAL 490
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
78-484 |
1.42e-49 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 181.06 E-value: 1.42e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 78 IALLLDPLSVAMTTVVLFVSLMVHIYTVGYMADDPGYQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGF 157
Cdd:PRK08376 84 IIWEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAF 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 158 WFKRETALSGSLKAFIVNRVGDVGFVLAIAAVLMYFGTLNYhdvfqqvpDVIGQRLGIFPgyeiSVITMICLLLFFGAMA 237
Cdd:PRK08376 164 RNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNM--------AYLAVKMSENP----TVVAKIALALFIAGLA 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 238 -KSAQVPLHVWLPESM-EGPTPISALIHAATMvtAGIYMVARMS-PLF--EFSPATLSLILVIGGTTAFFMGL-LAVVQN 311
Cdd:PRK08376 232 mKSGAVPVHMWLPDAYpAAPSSISAMLLVIKQ--AGLYALARVLfSIYgpAINLATVGWVIIILGCLTMFVGVaMAVVQK 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 312 DIKRVIAYSTISQLGYMAVALGAS---------------AYDAAIFHLITHAFFKALLFLAAGSVIIALhHEQDMRKMGG 376
Cdd:PRK08376 310 DVKRLLAYHSVSQIGYMLLGLGVGlaalgdpamasygeiALAGGIYHIVNHALYKALLFLTAGAVIYET-GTRNLNELGG 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 377 LVSYMPVTYLTFIIGALALSAIPPFSGFYSKDIIIEA-AQLSILPGAryayYCVLASAFVTPLY--IFRALFMTFHTNER 453
Cdd:PRK08376 389 LARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESsALFNPILGV----IAMIGSVLTLASFvkVFHTAFFGPPSEKV 464
|
410 420 430
....*....|....*....|....*....|.
gi 1085147720 454 MDpelkghVKESPFVVLFPLVCLAIPSVIVG 484
Cdd:PRK08376 465 MN------VKEPPKPMLVPMLILAIAIIGMG 489
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
78-484 |
3.04e-48 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 176.22 E-value: 3.04e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 78 IALLLDPLSVAMTTVVLFVSLMVHIYTVGYmaDDPGYQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGF 157
Cdd:PRK08375 71 IELRADSLSALFLLVTSILAIAALLYAIGY--GEHRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAM 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 158 wFKRETALSGSLKAFIVNRVGDVGFVLAIAAVLMYFGTLNYHDVFQQVPDVigqrlgifpgyeiSVITMICLLLFFGAMA 237
Cdd:PRK08375 149 -GGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAEN-------------PTVVTAFGFVLLALAL 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 238 KSAQVPLHVWLPESMEGPTPISALIHAATMVTAGIYMVARMS-----PLFEFSPATLSLILVIGGTTAFFMGLLAVVQND 312
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDD 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 313 IKRVIAYSTISQLGYMAVALG---ASAYDAAIFHLITHAFFKALLFLAAGSVIIAlHHEQDMRKMGGLVSYMPVTYLTFI 389
Cdd:PRK08375 295 VKRVLAYSTVSQMGYILLGLAlltPLALAAGLLHLLHHALMKGALFLAAGAIEVT-YGTRRLSELSGLGRRMPLTAAAFA 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 390 IGALALSAIPPFSGFYSKDIIIEAAQLSILPGARYAyycVLASAFVTPLY---IFRALFMTFHTNERMDPElkghvKESP 466
Cdd:PRK08375 374 VASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAV---LLASSLLALLYflrIWYRAFFGPPPPGSEAPK-----QEAP 445
|
410
....*....|....*...
gi 1085147720 467 FVVLFPLVCLAIPSVIVG 484
Cdd:PRK08375 446 LGMLAPSLALALLSLLLG 463
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
82-407 |
3.22e-46 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 173.92 E-value: 3.22e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 82 LDPLSVAMTTVVLFVSLMVHIYTVGYM--ADDPGYQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGFWF 159
Cdd:PRK06521 78 LDALSAFFLLVISLLGAAASLYSLGYFreYEGKGPGAMGFFYNLFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANH 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 160 KRETALSGSLKAFIVNRVGDVgfVLAIAAVLMYFGTLNY-HDVFQQVPdvigqrlgiFPGYEISVITmicLLLFFGAMAK 238
Cdd:PRK06521 158 REAEIRRAGFLYLLMAHAGAL--AILLAFGLLARESGSYdFAAMRAAH---------LSPFWASLVF---LLALFGFGAK 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 239 SAQVPLHVWLPESM-EGPTPISALIhAATMVTAGIYMVARMSplFEFSPATLS----LILVIGGTTAFFMGLLAVVQNDI 313
Cdd:PRK06521 224 AGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVV--FDLLGAPGWwwgvLVLALGAISAVLGVLYALAEHDL 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 314 KRVIAYSTISQLGYMAVALGA----SAYD----------AAIFHLITHAFFKALLFLAAGSVIIALHhEQDMRKMGGLVS 379
Cdd:PRK06521 301 KRLLAYSTIENIGIIFVGLGLamvfIAYGmpllaalaltAALYHLLNHALFKSLLFLGAGAVLHATG-TRDMEKLGGLIR 379
|
330 340
....*....|....*....|....*...
gi 1085147720 380 YMPVTYLTFIIGALALSAIPPFSGFYSK 407
Cdd:PRK06521 380 RMPWTAWAFLIGCLAISALPPLNGFVSE 407
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
49-548 |
2.48e-39 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 153.23 E-value: 2.48e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 49 LFKIFVINKYPSTEGVLYTWATAGmlhFDIALLLDPLSVAMTTVVLFVSLMVHIYTVGYMADDPGYqrfFSYVSLFTFA- 127
Cdd:PRK08668 37 LFLIKLYFTLKVGTGEKLTLFFGG---FKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAY---FNMFALMSLAg 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 128 MLTLVLANNFLLLFFGWEGVGLVSYLLIgfWFKRETALSGSLKAFIVNRVGDVGFVLAIAAVLMYFGTLNYHDvfqqvpd 207
Cdd:PRK08668 111 VLGVFLANDLLTLYIFWEIMTFSSFMMV--PMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFAD------- 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 208 vIGQRLGIFPGYEISVITMICLLLFfgAMAKSAQVPLHVWLPESM-EGPTPISALIHAA--TMVTAGIYMVARMSP---- 280
Cdd:PRK08668 182 -ISQGLINDTSTGFALIVFLFLLAF--GVAKAGIFPLHVWAPDAYsEAPQSFSAVLSGQlsKLGAYGFLLVLYVLPgtkl 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 281 ---LFEFSPATL--SLILVIGGTTAFFMGLLAVVQNDIKRVIAYSTISQLGYMAVALG---ASAYDAAIFHLITHAFFKA 352
Cdd:PRK08668 259 fseFGTYRGVPLfnYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGlgtSLGFAGGLFHVFNHALFKG 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 353 LLFLAAGSVIIALhHEQDMRKMGGLVSYMPVTYLTFIIGALALSAIPPFSGFYSKDIIIEAAQLSILPGARYAYYCVLAS 432
Cdd:PRK08668 339 LFFLIFAAVIYRT-GTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFGSIG 417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 433 AFvtpLYIFRALFMTFHTNERMDPElkgHVKESPFVVLFPLVCLAIPSVIVGqLLIGPMLFFHPPLLGNTIFVLPDHNvI 512
Cdd:PRK08668 418 SF---LYVFRPLAGVFLGQLPSDHK---DVKEAPLPMLIPMAILVLLNVVFG-VAPGLVLQEINKIFGELGIGPIDYE-G 489
|
490 500 510
....*....|....*....|....*....|....*.
gi 1085147720 513 NQLSTEYRGANIMaleagrTLTFWLAIAGIVAAWLF 548
Cdd:PRK08668 490 WEIKTGFGSWNAL------TVFILFVVGFIIAAIIY 519
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
92-412 |
9.04e-39 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 150.45 E-value: 9.04e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 92 VVLFVSLMVHIYTVGYMADDPGYQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGFWfKRETALSGSLKA 171
Cdd:MTH00095 53 ILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFY-NNWDSNSGAMNT 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 172 FIVNRVGDVgFVLAIAAVLMYFGTLnyhdvfqqvpdvigqrlgiFPGYEISVITMIcLLLFFGAMAKSAQVPLHVWLPES 251
Cdd:MTH00095 132 ALTNRIGDF-FIFLFFSGFIFSSYY-------------------FFSFSFFSSSMI-LMLLLTSFTKSAQFPFSSWLPKA 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 252 MEGPTPISALIHAATMVTAGIYMVARMSPLFeFSPATLSLILVIGGTTAFFMGLLAVVQNDIKRVIAYSTISQLGYMAVA 331
Cdd:MTH00095 191 MSAPTPVSSLVHSSTLVTAGLILLMNFSYLI-LNMNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLT 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 332 LGASAYDAAIFHLITHAFFKALLFLAAGSVIIALHHEQDMRKMGGLVSYMPVTYLTFIIGALALSAIPPFSGFYSKDIII 411
Cdd:MTH00095 270 FGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELIL 349
|
.
gi 1085147720 412 E 412
Cdd:MTH00095 350 E 350
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
80-362 |
1.05e-37 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 147.15 E-value: 1.05e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 80 LLLDPLSVAMTTVVLFVSLMVHIYTVGYMADDPGYQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGFWF 159
Cdd:PRK08168 65 LEVSGLGLVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYP 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 160 KRETALSGSLKAFIVNRVGDVgfVLAIAAVLMYF--GTLNYHDVFQQVpdvigQRLGIFPGYEISVitmicLLLFFGAMA 237
Cdd:PRK08168 145 DRPFARLAAHKKFIADRLAEL--LLLAAAALAYLevGSLSLSALWAHL-----AAQGASPSLQAAA-----LLLVLAVIL 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 238 KSAQVPLHVWLPESMEGPTPISALIHAAtMVTAGIYMVARMSPLFEFSPATLSLILVIGGTTAFFMGLLAVVQNDIKRVI 317
Cdd:PRK08168 213 KTAQLPVHGWLIQVMEAPTPVSALLHAG-VVNLGGFVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRL 291
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 1085147720 318 AYSTISQLGYMAVALGASAYDAAIFHLITHAFFKALLFLAAGSVI 362
Cdd:PRK08168 292 AWSTVAQMGFMLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
18-479 |
2.15e-37 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 147.96 E-value: 2.15e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 18 AAGLLGKTMGRVFTHRLLITLISISFFLSCYLFKIFVinkypSTEGVLYTWATAgmLHFDIALLLDPLSVAMTTVVLFVS 97
Cdd:PRK08667 18 VIPLVFRHKRKRVWQSVLWLVIAIALLLFAGSLQLFT-----GNPLDIPLWGIA--PGLDITFHIDRLAAFFIILIGLVS 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 98 LMVHIYTVGYMADDPGYQR---FFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGFWFKRETALSGSLKAFIV 174
Cdd:PRK08667 91 LCVAIYSLGYNEHMSSNERanlLSALTALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVM 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 175 NRVGDVGFVLAIaaVLMYFGTLNYHDVFQQVPDVIgqrlgifpgyeisvITMICLLLFFGAMAKSAQVPLHVWLPESMEG 254
Cdd:PRK08667 171 TQLSTVFLMLGI--IVLFIQTGSFELSPLGASAGI--------------LSLVFLLLFLGFGIKAGIIPFHKWLPYAHPA 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 255 -PTPISALIhAATMVTAGIYMVARMspLFEFSPATLS---LILVIGGTTAFFMGLLAVVQNDIKRVIAYSTISQLGYMAV 330
Cdd:PRK08667 235 sPSNVSALM-SGVMLKVAVYGLVRF--LMDVLSPELWwgvLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILM 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 331 ALG--------------ASAYDAAIFHLITHAFFKALLFLAAGSVIIALHhEQDMRKMGGLVSYMPVTYLTFIIGALALS 396
Cdd:PRK08667 312 GIGlyvifgvygldtlaLLALGGALFHSLNHALFKSLLFLTAGSVVHATG-TRNIEKMGGLVKLMPYTSALFLVGAVSIA 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 397 AIPPFSGFYSKDIIIEAAqlsilpgarYAYYCVLASAFVTPLYIFRALFmtfhtnermdpELKGHVKESPFVVLFPLVCL 476
Cdd:PRK08667 391 ALPPFNGFASELLLYESF---------FQSFSVADPLIKILLFSVLAIF-----------ALTSALAAACFVKAFGITFL 450
|
...
gi 1085147720 477 AIP 479
Cdd:PRK08667 451 AMP 453
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
76-498 |
6.12e-37 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 144.57 E-value: 6.12e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 76 FDIALLLDPLSVAMTTVVLFVSLMVHIYTVGYMADD--PGYQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYL 153
Cdd:PRK06589 75 YSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTAF 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 154 LIGFWFKRETALSGSLKAFIVNRVGDVGFVLAIAAVLMYFGTLNYhdvfqqvpdvigQRLGIFPGYEisviTMICLLLFF 233
Cdd:PRK06589 155 LIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDF------------VSGGLFSKNQ----SIILLLMFI 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 234 GAMAKSAQVPLHVWLPESMEGPTPISALIHAATMVTAGIYMVARMSpLFEFSPATLSLIL-------VIGGTTAFFMGLL 306
Cdd:PRK06589 219 YGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKIL-LYIFGLSYLQRIFaefnwliFIPIVSIFYSSLK 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 307 AVVQNDIKRVIAYSTISQLGYM---AVALGASAYDAAIFHLITHAFFKALLFLAAGSvIIALHHEQDMRKMGGLVSYMPV 383
Cdd:PRK06589 298 ALKTDNIKKILAYSTISQLSLAllsAFILTPKALGAAILHLVSHSFAKICLFYSMGS-IYSLKKEDQVDKLHGTSKSFPL 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 384 TYLTFIIGALALSAIPPFSGFYSKDIIIEAAQLSILPGARYAYYCVL-ASAFVTPLYIFRALFMTFhtneRMDPELKGHV 462
Cdd:PRK06589 377 ISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLVViASSILSALYLLKILSSIY----KPSLSENSFI 452
|
410 420 430
....*....|....*....|....*....|....*.
gi 1085147720 463 KESPFVVLFPLVCLAIPSVIVGQLLIGPMLFFHPPL 498
Cdd:PRK06589 453 TKSLPYLMQISVITCCCALTLFYFIQILIREFLAYI 488
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
17-414 |
2.03e-36 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 142.76 E-value: 2.03e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 17 LAAGLLGKTMGRVFTHRLLITLISISFFLSCYLfkifvinkypstegVLYTWATAGMLHFDIALLLDPLSVAMTTVVLFV 96
Cdd:PRK06458 16 LASLLLFALRKRRLVATLNVLGITLTLILALWL--------------VFTVPDAGEIFAAGLWFFIDDLNVFFLALIGVV 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 97 SLMVHIYTVGYMADD-------PGYQRF-FSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGFwFKRETALSGS 168
Cdd:PRK06458 82 GFLTSLYSIGYMRHEvehgelsPVTLRLyYGMYQLFLFTMLLALTSNNLGLMWVAIEATTLSSALLVGI-YRTRASLEAA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 169 LKAFIVNRVGdVGFVLaIAAVLMYFgtlNYHDVFQQVPDVI--GQRLGIFPGYEISVITMICLLLFFGAMAKSAQVPLHV 246
Cdd:PRK06458 161 WKYIIICSVG-VAFAL-FGTILVYA---NAATVMGDGEMAIlwTELLKHASLLDPTLMKLAFVFLLIGFGTKVGLFPMHA 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 247 WLPES-MEGPTPISA-----LIHAATMVTAGIYMVARMSPLFEFSPatlSLILVIGGTTAFFMGLLAVVQNDIKRVIAYS 320
Cdd:PRK06458 236 WLPDAhSEAPSPVSAllsgvLLNVALYAVLRYYILIDAAIGSDFPG---RLLLIFGLLSVLVAAFFLLRQRDIKRLFAYS 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 321 TISQLGYMAVAL---GASAYDAAIFHLITHAFFKALLFLAAGSVIIALhHEQDMRKMGGLVSYMPVTYLTFIIGALALSA 397
Cdd:PRK06458 313 SIEHMGLIAFALgigGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKY-GTRDINVIRGLLKVSPLTGWGLMLGALAIAG 391
|
410
....*....|....*..
gi 1085147720 398 IPPFSGFYSKDIIIEAA 414
Cdd:PRK06458 392 MPPFGVFISEFLILTAG 408
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
15-484 |
2.16e-35 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 139.83 E-value: 2.16e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 15 GTLAAGLLGKTMGRVFTHRLLITLIsISFFLSCYLFKIFVINKYPSTEGVLYTWATAgmLHFDIALLLDPLSVAMTTVVL 94
Cdd:COG1008 16 GALLLLLLPRRNARLARWVALAVSL-LTLLLSLYLLAGFDPGTGGFQFVESYPWIPS--LGISYHLGVDGISLPLVLLTA 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 95 FVSLMVHIYTVGYMADDPGyqRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGFW--FKRETAlsgSLKAF 172
Cdd:COG1008 93 LLTPLAILASWNEIKKRPK--LYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWggERRIYA---AIKFF 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 173 IVNRVGdvGFVLAIAAVLMYF----GTLNYHDVfqqvpdvigQRLGIFPGYEisvitMICLLLFFGAMA-KSAQVPLHVW 247
Cdd:COG1008 168 LYTLAG--SLLMLVAILALYFlagaLTFDIAEL---------AAAPLPLTAQ-----LLLFLAFFIAFAvKVPMFPFHTW 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 248 LPES-MEGPTPISAlIHAATMVTAGIYMVARMS-PLF-----EFSPatlsLILVIGGTTAFFMGLLAVVQNDIKRVIAYS 320
Cdd:COG1008 232 LPDAhVEAPTAGSV-LLAGVLLKMGGYGLLRFAlPLFpeasaYFAP----LLAALGVIGIIYGALVALAQTDLKRLIAYS 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 321 TISQLGYMAVALGAS---AYDAAIFHLITHAFFKALLFLAAGsVIIALHHEQDMRKMGGLVSYMPVTYLTFIIGALALSA 397
Cdd:COG1008 307 SVSHMGFVLLGIFALnplGLQGAVLQMVSHGLITAALFLLVG-VLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLG 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 398 IPPFSGFYSKDIIIEAAqlsilpgarYAYYCVLA-----SAFVTPLYIFRALFMTFHtnERMDPELKgHVKESPFVVLFP 472
Cdd:COG1008 386 LPGTSGFVGEFLVLLGA---------FQVNPWLAilaalGLILTAAYLLWMYQRVFF--GPLKEELA-ELPDLNPRELAV 453
|
490
....*....|..
gi 1085147720 473 LVCLAIPSVIVG 484
Cdd:COG1008 454 LAPLAALILLLG 465
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
64-414 |
3.69e-35 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 139.10 E-value: 3.69e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 64 VLYTWATAGMLHFDIALLLDPLSVAMTTVVLFVSLMVHIYTVGYMADDPGYQrfFSYVSLFTFA---MLTLVLANNFLLL 140
Cdd:COG1007 50 LLLALGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLR--GEFYALLLFAtlgMMLMASANDLLTL 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 141 FFGWEGVGLVSYLLIGFWFKRETALSGSLKAFIVNRVGDVGFVLAIAAVLMYFGTLNYHDVFQQVPDVIGQRLGIFPGye 220
Cdd:COG1007 128 FLGLELLSLSLYVLVAFRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIAAALAAGGANSPLLLLG-- 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 221 isvitmicLLLFFGAMA-KSAQVPLHVWLPESMEG-PTPISALIHAATMVtAGIYMVAR--MSPLFEFSPATLSLILVIG 296
Cdd:COG1007 206 --------LVLVLAGLAfKLSAVPFHMWTPDVYEGaPTPVTAFLATAPKI-AAFAALLRllVEAFPGLAADWQLLLAVLA 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 297 GTTAFFMGLLAVVQNDIKRVIAYSTISQLGYMAVAL---GASAYDAAIFHLITHAFFKALLFLAAGSVIIALHHEQDMRK 373
Cdd:COG1007 277 VLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLaagTPLGVSAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIED 356
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1085147720 374 MGGLVSYMPVTYLTFIIGALALSAIPPFSGFYSKDIIIEAA 414
Cdd:COG1007 357 LAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAA 397
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
67-414 |
8.44e-35 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 139.64 E-value: 8.44e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 67 TWATAGMLHFDIALLL-DPLSVAMTTVVLFVSLMVHIYtvGYMADDPGYQRF-FSYVSlftfAMLTLVLANNFLLLFFGW 144
Cdd:PRK12668 49 TYLTVTFLGFDLVLGRvDKLSRVFGLIFGIMAFIGVIY--ALHVKDPGQHVAaLLYVG----SALGAVFAGDLLTLFVFW 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 145 EGVGLVSYLLIgfWFKR-ETALSGSLKAFIVNRVGdvGFVLAIAAVLMYFGTlnyhdvfqqvpdvigqrlGIFPGYEISV 223
Cdd:PRK12668 123 ELMAFTSTFLV--WARGtKAAVRAGFRYLLVHVLG--GVLLLAGILLHYAET------------------GSFAFGAIAG 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 224 ITMIC-LLLFFGAMAKSAQVPLHVWLPESMEGPTPISALIHAATMVTAGIYMVARMSPLFEfspatlsLILVIGGTTAFF 302
Cdd:PRK12668 181 LGGTAaWLILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPGTE-------LLIYIGAAMAVY 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 303 MGLLAVVQNDIKRVIAYSTISQLGYMAVALG---ASAYDAAIFHLITHAFFKALLFLAAGSVIIALHhEQDMRKMGGLVS 379
Cdd:PRK12668 254 GVFFALLENDLRRLLSYHIVSQVGYMVAGIGigtALAINGAVAHAFNHILYKGLLFMSAGAVLYRTG-TEKLTELGGLYR 332
|
330 340 350
....*....|....*....|....*....|....*
gi 1085147720 380 YMPVTYLTFIIGALALSAIPPFSGFYSKDIIIEAA 414
Cdd:PRK12668 333 SMPLTALFCLVGALSISAFPLFSGFVSKSMIISAA 367
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
78-484 |
3.71e-33 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 133.35 E-value: 3.71e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 78 IALLLDPLSVAMTTVVLFVSLMVHIYTVGYMADDPgyqrFFSYVSLFTFAMLT---LVLANNFLLLFFGWEGVGLVSYLL 154
Cdd:PRK08377 72 INLYIGPFAALFVLIIAIVSFIMSIFSLKAVEVEP----IDKYAMLFLLLMLGatgMIATGDIFNLFVFMEITAITAYAL 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 155 IGFwFKRETALSGSLKAFIVNRVGDVGFVLAIAAVLMYFGTLNYHDvfqqvpdvIGQRLGIFPGYeisVITMICLLLFFG 234
Cdd:PRK08377 148 TAY-NKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAH--------IAQLAGTIDPT---VAQVGLALLIFG 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 235 AMAKSAQVPLHVWLPESMEG-PTPISALIhAATMVTAGIYMVARMSPLFEFSPA---TLSLILVIGGTTAFFMGLLAVVQ 310
Cdd:PRK08377 216 LAVEAELFPLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANGwssVLKLVIIMATLTVFFAELSALRQ 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 311 NDIKRVIAYSTISQLGYMAVALG---ASAYDAAIFHLITHAFFKALLFLAAGSVIIALHHEQdMRKMGGLVSYMPVTYLT 387
Cdd:PRK08377 295 KNVKRMIAYSSIGQVGMIALALAlgtQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTE-IEKFEGLGKRMPLTALA 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 388 FIIGALALSAIPPFSGFYSKDIIIEAAqlsILPGARYAYYCVLASAFVTPLYIFRALFMTFHTNErmdpelkGHVKESPF 467
Cdd:PRK08377 374 LTIGALSTVGIPLFNVFWSKFRIILAG---LSAGYTWPVALVLGASVVEAVYYFRLIHTMWFKGE-------GERIRENA 443
|
410
....*....|....*..
gi 1085147720 468 VVLFPLVCLAIPSVIVG 484
Cdd:PRK08377 444 AIGIILLLLAALIVVIG 460
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
76-414 |
7.92e-33 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 132.38 E-value: 7.92e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 76 FDIALLLDPLS---VAMTTVVLFVSLMVHIYTVGymaddPGYQRFFSYvsLFTFAMLTLV----LANNFLLLFFGWEGVG 148
Cdd:PRK07691 69 FGIVFVADMFAallVLTSSIITFLVILYSFQTIG-----IERERYYYY--PSVLFMLAGVngafLTGDIFNLFVFFEVML 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 149 LVSYLLIGFWfKRETALSGSLKAFIVNRVGDVGFVLAIAAVLMYFGTLNYHDVFQQVPDVIGQRLGIfpgyeisvITMIC 228
Cdd:PRK07691 142 MASYVLIVIG-GTKIQLRESIKYVLINVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTGL--------ITVVA 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 229 LLLFFGAMAKSAQVPLHVWLPESMEGP-TPISALIhAATMVTAGIYMVARMSPLF--EFSPATLSLILVIGGTTAFFMGL 305
Cdd:PRK07691 213 ILFLFVFATKAGLFPLYFWLPGSYYAPpIAIAALF-GALLTKVGVYAIARTFTLFfsHDTSFTHYLILILALLTIIFGVI 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 306 LAVVQNDIKRVIAYSTISQLGYMAVALGA---SAYDAAIFHLITHAFFKALLFLAAGsVIIALHHEQDMRKMGGLVSYMP 382
Cdd:PRK07691 292 GAVAYFDIKKIIIYNIMIAVGVILVGVAMmteSGMIGAIYYLIHDMIVKAALFLLIG-IMIKITGTTDLKKMGGLIKRYP 370
|
330 340 350
....*....|....*....|....*....|..
gi 1085147720 383 VTYLTFIIGALALSAIPPFSGFYSKDIIIEAA 414
Cdd:PRK07691 371 VLGWMFFIAALSLAGIPPLSGFYGKFFIVEGT 402
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
79-414 |
2.06e-31 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 128.01 E-value: 2.06e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 79 ALLLDPLSVAMTTVVLFVSLMVHIYTVGYMADDPGyqrfFSYVSLFTFA---MLTLVLANNFLLLFFGWEGVGLVSYLLI 155
Cdd:PRK05777 68 MLVVDGFALFLKGLILLASLLALLLARPYLEDRGR----GEFYLLVLFAllgMMVMVSANDLLTLFLGLELLSLPLYALA 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 156 GFWFKRETALSGSLKAFIVNRVGDVGFVLAIAAVLMYFGTLNYHDVFQQVPDVIGQRLGIFpgyeISVITMICLLLFfga 235
Cdd:PRK05777 144 ALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKALADGSGNSLLLL----FGLVFLLVGLAF--- 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 236 maKSAQVPLHVWLPESMEG-PTPISALIHAATMVtAGIYMVARmspLFEFSPATLS-----LILVIGGTTAFFMGLLAVV 309
Cdd:PRK05777 217 --KLSAVPFHMWTPDVYEGaPTPVTAFLATAPKI-AAFAVLLR---LLVVAFGGLSedwqqVLAIIAIASMLVGNLAALS 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 310 QNDIKRVIAYSTISQLGYMAVALGA---SAYDAAIFHLITHAFFKALLFLAAGSVIIALHHEQDMRKMGGLVSYMPVTYL 386
Cdd:PRK05777 291 QTNIKRLLAYSSIAHAGYLLVGLAAgtaEGYSAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAA 370
|
330 340
....*....|....*....|....*...
gi 1085147720 387 TFIIGALALSAIPPFSGFYSKDIIIEAA 414
Cdd:PRK05777 371 VMTIFMLSLAGIPPTAGFWGKFYVFEAA 398
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
76-484 |
7.43e-28 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 117.74 E-value: 7.43e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 76 FDIALLLDPLSVAMTTVVLFVSLMVHIYTVGYMADDpgYQRFFsyvsLFTFAMLTLVLANNFLL------LFFGWEGVGL 149
Cdd:PRK12663 69 FGIQFTGDSLSALMVTTASFVATAIMAYGFGDIEHS--GRRYG----FPPFILLLMAGVIGSFLtgdlfnLYVWFEVMLI 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 150 VSYLLIGFWFKRETaLSGSLKAFIVNRVGDVGFVLAIAAVLMYFGTLNYHDVFQQVPDVigqrlgifpgYEISVITMICL 229
Cdd:PRK12663 143 ASFVLITLGQEREQ-LRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDM----------GDTATLTTIAL 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 230 LLFFGAMAKSAQVPLHvWLPESMEGPTPISALIHAATMVTAGIYMVAR-MSPLFEFSPATLSLILVIGGTTAFFMGLL-A 307
Cdd:PRK12663 212 LFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRvFTLLFPQERELLHPLLATMAAITMVIGALgA 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 308 VVQNDIKRVIAYSTISQLGYMAVALG---ASAYDAAIFHLITHAFFKALLFLAAGSvIIALHHEQDMRKMGGLVSYMPVT 384
Cdd:PRK12663 291 LAYKDIRRIAGYQVISSIGFILLGLAlgtPAGINGAIFYLVHDMVVKTALFLIAGS-LVRLTGYRSLQYLGGLYRKEPLF 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 385 YLTFIIGALALSAIPPFSGFYSKDIIIEAAqlsILPGARYAYYCVLASAFVTPLYIFRALFMTFHTNErmDPELKGHVKE 464
Cdd:PRK12663 370 GALFLILIFAIGGLPPFSGFWGKVLLVQGA---LDNGAYILLALMLITSLITMYSLFRIFFLAYWGDK--DGEEVNFKPI 444
|
410 420
....*....|....*....|
gi 1085147720 465 SPFVVLfPLVCLAIPSVIVG 484
Cdd:PRK12663 445 PLYRKL-PLSILAVVVIAMG 463
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
128-404 |
1.05e-27 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 117.23 E-value: 1.05e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 128 MLTLVLANNFLLLFFGWEGVGLVSYLLIGFW--FKRETAlsgSLKAFIVNRVGDVGFVLAIAAVLMY----FGTLNYHDV 201
Cdd:PRK05846 124 VIGVFAALDLLLFYVFFEAMLIPMYFLIGVWggKNRIYA---ATKFFLYTLLGSLLMLVAIIYLVVVyynaTGTFDIADL 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 202 FQqvpdvigqrLGIFPGYEISVItmiclLLFFGAMA-KSAQVPLHVWLPESMEGPTPISALIHAATMVTAGIYMVARMS- 279
Cdd:PRK05846 201 LN---------LPLPPGVQYWLF-----LAFFIAFAvKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSl 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 280 PLF-----EFSP--ATLSLILVIGGttaffmGLLAVVQNDIKRVIAYSTISQLGYMAVALGAS---AYDAAIFHLITHAF 349
Cdd:PRK05846 267 PLFpdashEFAPiiITLGVIAIIYG------ALVALAQTDIKKLIAYSSISHMGFVTLGIFAGnqlGIQGAIFQMISHGL 340
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1085147720 350 FKALLFLAAGsVIIALHHEQDMRKMGGLVSYMPVTYLTFIIGALALSAIPPFSGF 404
Cdd:PRK05846 341 SSAALFLLVG-VLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGF 394
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
71-362 |
1.38e-27 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 117.06 E-value: 1.38e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 71 AGMLHFDIallldpLSVAMTTVVLFVSLMVHIYTVGYMADDPGYQRFFSYVSLFTFAMLTLVLANN--FLLLFFGWEGVG 148
Cdd:PRK08601 65 VGPWHLDT------LAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFTTGFASLAWLSGDlrLMALCWGATLLG 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 149 LVsyLLIG---FWFKRETALSGSLKAFIVNRVGdvgfvLAIAAVLMYFGTLNYhdvfQQVPDVIGQRLGIFPGYEISVIT 225
Cdd:PRK08601 139 LT--LLIGlnkGWKVAREAAKISGMLFLISWLA-----LALAIVWLFIATGEW----QLTSVLSNENLAQLGTWEKTGIN 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 226 micLLLFFGAMAKSAQVPLHVWLPESMEGPTPISALIHAAtMVTAGIYMVARMSPLFEfSPATLSLILVIGGTTAFFMGL 305
Cdd:PRK08601 208 ---LLLILAVMIPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFH-DDIAQILLLIFASISVLIGTG 282
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1085147720 306 LAVVQNDIKRVIAYSTISQLGYMAVALGASAYDAAIFHLITHAFFKALLFLAAGSVI 362
Cdd:PRK08601 283 ISLVQVDYKRQLVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAV 339
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
77-496 |
2.06e-25 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 110.03 E-value: 2.06e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 77 DIALLLDPLSVAMttvVLFVSLMVHIYTVGYMADDPGYQRFF-SYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLI 155
Cdd:TIGR01972 70 SYHLGVDGISLLL---VLLTALLTLLAILASWESIQKRVKEFyALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLI 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 156 GFW--FKRETAlsgSLKAFIVNRVGDVGFVLAIaaVLMYFgtLNYHDVfqQVPDVIGQRLGifpgyeiSVITMICLLLFF 233
Cdd:TIGR01972 147 GVWggPNRIYA---AMKFFLYTLAGSLLMLLAI--LGLYF--LGGGTF--DLLELLNLPLP-------FGVQTWLFLAFF 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 234 GAMA-KSAQVPLHVWLPESM-EGPTPISALIhAATMVTAGIYMVARMS-PLF-----EFSPatlsLILVIGGTTAFFMGL 305
Cdd:TIGR01972 211 IAFAvKVPLFPLHTWLPDAHvEAPTAGSVIL-AGVLLKMGTYGFLRFNlPLFpdaslYFAP----VLAALGVIAIIYGAL 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 306 LAVVQNDIKRVIAYSTISQLGYMAVALGA---SAYDAAIFHLITHAFFKALLFLAAGsVIIALHHEQDMRKMGGLVSYMP 382
Cdd:TIGR01972 286 IALAQTDIKRLIAYSSISHMGFVLLGIFSfneLGISGAVFQMISHGLITAALFLLVG-VLYERAHTRDIAKYGGLANKMP 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 383 VTYLTFIIGALALSAIPPFSGFYSKDIIIEAA-QLSILPGARYAYYCVLASAFVTPLYiFRALFMTFHTNERMdpelkgH 461
Cdd:TIGR01972 365 VLAAFFMLFAMASLGLPGTSGFVGEFLILLGSfKVNPVVAFLAALGIVLAAAYMLTLY-KRVFFGELSNPEVA------E 437
|
410 420 430
....*....|....*....|....*....|....*
gi 1085147720 462 VKESPFVVLFPLVCLAIPSVIVGqllIGPMLFFHP 496
Cdd:TIGR01972 438 FPDLNGREIAVLAPLVVLILFLG---LYPNPLLDL 469
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
78-413 |
2.68e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 110.06 E-value: 2.68e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 78 IALLLDPLSVAMTTVVLFVSLMVHIYTVGY-MADDPGYQRffsyVSLF--TFAMLTLVLANNFLL-----LFFGWEGVGL 149
Cdd:PRK12665 70 ITLVVDRLSALMLVVSSVVLLAVLVYAIGQgIRDGDEEQP----VSIFlpTYLILVAGVSNAFLAgdlfnLYVGFEILLV 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 150 VSYLLIGFWFKRETALSGSlKAFIVNRVGDVGFVLAIAAVLMYFGTLNYHDVFQQVPDV-IGQRLGIFpgyeisvitmIC 228
Cdd:PRK12665 146 ASYVLLTLGATAARVRAGV-TYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDELpSGTRTALF----------AV 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 229 LLLFFGAmaKSAQVPLHVWLPESM-EGPTPISAlIHAATMVTAGIYMVARMSPLFeFSPATLSLILVIGGTTAFFMGLL- 306
Cdd:PRK12665 215 LLVAFGI--KAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLL-FPGGGLDTLLMVVALLTMVVGILg 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 307 AVVQNDIKRVIAYSTISQLGYM--AVALG-ASAYDAAIFHLITHAFFKALLFLAAGsVIIALHHEQDMRKMGGLVSYMPV 383
Cdd:PRK12665 291 AIAQSDIKRLLSFTLVSHIGYMvfGIALStVAGLSGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPL 369
|
330 340 350
....*....|....*....|....*....|
gi 1085147720 384 TYLTFIIGALALSAIPPFSGFYSKDIIIEA 413
Cdd:PRK12665 370 LAVLFFVPALNLGGIPPFSGFIGKVALLEA 399
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
80-414 |
6.11e-24 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 105.42 E-value: 6.11e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 80 LLLDPLSVAMTTVVLFVSLMVHIYTVGYM-ADDPGYQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGFW 158
Cdd:TIGR01770 66 FIVDNFALLIKLILLLSTLLTFFFALSYLsKEKINKFEFYILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLK 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 159 FKRETALSGSLKAFIVNRVGDVGFVLAIAAVLMYFGTLNYHDVFQQVPDVigqrlgifpGYEISVITMICLLLFFGAMAK 238
Cdd:TIGR01770 146 RKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSNG---------MLNISLLLLGIVLILVGLLFK 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 239 SAQVPLHVWLPESMEG-PTPISALIHAATMVTA-GIYMVARMSPLFEFSPATLSLILVIGGTTAFFMGLLAVVQNDIKRV 316
Cdd:TIGR01770 217 LSAVPFHMWVPDVYEGaPTPVTAFFSIVPKIAIfAVFLRLFLYILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRL 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 317 IAYSTISQLGYMAVALGASAYDaAIFHLITHAFFKALLFLAAGSVIIALHHEQD-----MRKMGGLVSYMPVTYLTFIIG 391
Cdd:TIGR01770 297 LAYSSISHVGYILIGLLAGTLE-GIKAVLFYIFIYALMSLGAFGVLSLLRSYKDewieyISDFAGLFKTNPILAILILIF 375
|
330 340
....*....|....*....|...
gi 1085147720 392 ALALSAIPPFSGFYSKDIIIEAA 414
Cdd:TIGR01770 376 MFSLAGIPPLAGFFGKFYVFFAL 398
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
75-413 |
1.33e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 104.65 E-value: 1.33e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 75 HFDIALLLDPLSVAMTTVVLFVSLMVHIYTVgymadDPGYQRFFSYVSLFTFAMLTLV-LANNFLLLFFGWEGVGLVSYL 153
Cdd:PRK07234 58 NFGVTLRADALSGYFILTNALVTLAVIFYCW-----ESAKTRFFYAQLLILHGSVNAAfVCADLISLYVALEVLSIATFL 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 154 LIGFwFKRETALSGSLKAFIVNRVGDVGFVLAIAAVLMYFGTLNYHDVFQQVPDVIGqrlgifpgyeisvitmiclLLFF 233
Cdd:PRK07234 133 LVAY-PRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATADPEAFA-------------------LIAL 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 234 GAMAKSAQVPLHVWLPESMEGPTPISALIHAATMVTAGIYMVARMSPLfefSPATLSLILVIGGTTAFFMGLLAVVQNDI 313
Cdd:PRK07234 193 GLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALD---VPGLDLIVRIFGVGTALLGVLFALLEKDL 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 314 KRVIAYSTISQLGYMAVAlgasAYDAAIFHLiTHAFFKALLFLAAGsVIIALHHEQDMRKMGGLVSYMPVTyltfiIGAL 393
Cdd:PRK07234 270 KRMLAFSTISQLGFILAA----PLVGGLYAL-AHGLVKSTLFLCAG-ALPSRNFTELISQMLGIGKWIPLT-----MASF 338
|
330 340
....*....|....*....|
gi 1085147720 394 ALSAIPPFSGFYSKDIIIEA 413
Cdd:PRK07234 339 SIAGFPLLAGFVSKVLTLKN 358
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
76-484 |
5.77e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 102.89 E-value: 5.77e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 76 FDIALLLDPLSVAMTTVVLFVSLMVHIYTVGYMADDPGYQRFFSYVSLFTFA---MLTLVLANNFLLLFFGWEGVGLVSY 152
Cdd:PRK12662 68 YGIELRVDILSATMLVLVNFIAVMSVLYGIYPNRKEISVNKIPSFYSAFLLClggLLGILVSNDVFNIYVFLEISSISSY 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 153 LLIGFWfKRETALSGSLKAFIVNRVGDVGFVLAIAAVLMYFGTLNYHDVFQQVPDVIGQRlgifpgyeisVITMICLLLF 232
Cdd:PRK12662 148 VLVAMG-RDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNR----------AIQIGVLFIM 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 233 FGAMAKSAQVPLHVWLPESM-EGPTPISALIhAATMVTAGIYMVARM------SPLFEFSPATLSLILVIGGTTAFFMGL 305
Cdd:PRK12662 217 VGLFIKAALFPFHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRIvydvfkANFVFTTLPFNNVFMILAALAIVFGSV 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 306 LAVVQNDIKRVIAYSTISQLGYMAVALGASAYD---AAIFHLITHAFFKALLFLAAGSviIALHHEQ-DMRKMGGLVSYM 381
Cdd:PRK12662 296 LAILSKDIKRIFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGS--ISYHFGTtKLEDCLNLWKSM 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 382 PVTYLTFIIGALALSAIPPFSGFYSKDIIIEAAqlsILPGARYAYYCVLASAFVTPLYIFRALFMTFHTNERMDPELKGH 461
Cdd:PRK12662 374 PKITLAFVLLSLSLIGMPPTSGFVAKWYILDAF---IKSNAWIGLVVLLVGSGLSVIYVWKIVEALYFESRMVESKANDK 450
|
410 420
....*....|....*....|...
gi 1085147720 462 VKESPFVVLFPLVCLAIPSVIVG 484
Cdd:PRK12662 451 AFKTPNAMVLCIWIMAILSIIVG 473
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
118-484 |
4.09e-21 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 97.02 E-value: 4.09e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 118 FSYVSLFTFAMLT-LVLANNFLLLFFGWEGVGLVSYLLIgFWFKRETALSGSLKAFIVNRVGDVGFVLAIAAVLMYFGTL 196
Cdd:PRK06277 102 YVFLMLMGLASVSaIVLADDIFNLYVFFEIAAIVQVGLV-IASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTL 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 197 NYHDVfqqvpdvigqRLGIFPGYEISVITMICLLLFFGAMAKSAQVPLHVWLPESMEGPTP-ISALIHA---ATMVTAGI 272
Cdd:PRK06277 181 NITDI----------HNALLVNPTSPVIYGGLLLLIFGLLYGSGLPPFHTIKSDIYAKAKPfGSALLQTfskFVLVALML 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 273 YMVARMSPLFEFSPATLSLILVigGTTAFFMGL-LAVVQNDIKRVIAYSTISQLGYMAVALG---ASAYDAAIFHLITHA 348
Cdd:PRK06277 251 VIFKLFGGLSYFPSAQGVLIAL--SVLAMVFGVvMALLQTDYKRLLAYHAISQGGYVAAGLAlgtPLGIVAGIFHAINHV 328
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 349 FFKALLFLAAGSVIiALHHEQDMRKMGGLVSYMPVTYLTFIIGALALSAIPPFSGFYSKDIIIEAAQLSILPgaRYAYYC 428
Cdd:PRK06277 329 IYKSALFLGAGIVS-YRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQAAMQANMP--ELAIIM 405
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1085147720 429 VLASaFVTPLYIFRALFMTFHTNERMDPELKGhvKESPFVVLFPLVCLAIPSVIVG 484
Cdd:PRK06277 406 IIVS-IGTFVSMMKAFYLIYLKPKPEELEYKN--KKVPKYAVFSLAVLTILCIILG 458
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
75-363 |
1.63e-20 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 95.33 E-value: 1.63e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 75 HFDIALLLDPLSVAMTTVVLFVSLMVHIYTVGYMADDPGYQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLL 154
Cdd:MTH00063 36 SWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFL 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 155 IGFWfkretALSGSLKAFIV----NRVGDVGFVLAIAavLMYFGTLNYhdvfqqvpdvigqrlgifpgyeisviTMICLL 230
Cdd:MTH00063 116 ILFY-----DNFLSLRASVVtlvsSRFGDVCLFLLIG--LSCWGGSGS--------------------------FLCCLF 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 231 LFFGAMAKSAQVPLHVWLPESMEGPTPISALIHAATMVTAGIYMVARMSPLFEFSPAtLSLILVIGGTTAFFMGLLAVVQ 310
Cdd:MTH00063 163 FFLIVFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWL-SIFFSVLLLLTIFITGVSSLFF 241
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1085147720 311 NDIKRVIAYSTISQLGYMAVALGASAYDAAIFHLITHAFFKALLFLAAGSVII 363
Cdd:MTH00063 242 SDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMS 294
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
233-413 |
4.62e-19 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 91.04 E-value: 4.62e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 233 FGAMAksAQVPLHVWLPESMEGPTPISALIHAATMVTAGIYMVARMSPLFEFSPATLS-LILVIGGTTAFFMGLLAVVQN 311
Cdd:PRK08042 190 FGLLA--GIIPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGvALLVLGMITAFVGGLYALMEH 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 312 DIKRVIAYSTISQLGYMAVALGASAYDAA--------------IFHLITHAFFKALLFLAAGSVIIALHHeQDMRKMGGL 377
Cdd:PRK08042 268 NIQRLLAYHTLENIGIILLGLGAGVTGIAleqpalialglvggLYHLLNHSLFKSVLFLGAGSVWFRTGH-RDIEKLGGI 346
|
170 180 190
....*....|....*....|....*....|....*.
gi 1085147720 378 VSYMPVTYLTFIIGALALSAIPPFSGFYSKDIIIEA 413
Cdd:PRK08042 347 GKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQS 382
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
68-118 |
2.27e-17 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 75.93 E-value: 2.27e-17
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 1085147720 68 WATAGMLHFDIALLLDPLSVAMTTVVLFVSLMVHIYTVGYMADDPGYQRFF 118
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
123-484 |
2.34e-17 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 85.47 E-value: 2.34e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 123 LFTFAMLTLV-------LANNFLLLFFGWEgVGLVS-YLLIGFW--FKRETALSgslkAFIVNRVGDVGFVLaIAAVLMY 192
Cdd:PRK12561 88 LFYFLMLVLYsaqigvfLAQDLLLFFLMWE-LELVPvYLLISIWggQKRLYAAT----KFILYTALASIFIL-VAGLALA 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 193 FgtlnYHDVFQQVPDVIGQRlgiFPGYEISVITMICLLLFFGAmaKSAQVPLHVWLPESM-EGPTPISaLIHAATMVTAG 271
Cdd:PRK12561 162 L----SGDTFTFDLAELGAK---SYPLALELLLYAGFLIAFGV--KLPIFPLHTWLPDAHgEASAPVS-MILAGVLLKMG 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 272 IYMVARMS-PLFEFSPATLSLILVIGGTTAFFMGLL-AVVQNDIKRVIAYSTISQLGYmaVALGASAYDA-----AIFHL 344
Cdd:PRK12561 232 GYALIRFNvQMLPDAHVYFAPALAILGVVNIIYGALnAFAQDNVKRRLAYSSVSHMGF--VLLGIAAFTDlgisgAMLQM 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 345 ITHAFFKALLFLAAGsVIIALHHEQDMRKMGGLVSYMPVTYLTFIIGALALSAIPPFSGFYSKDIIIEAAQLSILPGARY 424
Cdd:PRK12561 310 ISHGLIAAALFFLTG-VTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVFLGITSSDVYSSTF 388
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1085147720 425 AYYCVLASA---FVTPLYIFRALFMTFHTNERMDPELKGHVKESPFVVLFPLVCLAIPSVIVG 484
Cdd:PRK12561 389 RTITILLAAvglILTPIYLLSMLRRVFYGPRSELLPALAVVEDAKPRELFIALSLLVPIIGIG 451
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
80-434 |
1.00e-16 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 83.27 E-value: 1.00e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 80 LLLDPLSVAMTTVVLFVSLMVHIYTVGYMAD-------DPGYQRFFSYVSLFTFAMLTLVL-ANNFLLLFFGWEGVGLVS 151
Cdd:PRK08676 59 LFIDHLGIFVVLIASVVFILAALYARGYVDHllsngelDPENLKVFYLGFNLLLSVITFAFfSDNLALFWIFAELTTVFS 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 152 YLLIGFWFKRETaLSGSLKafivnrvgdvgfVLAIAAVLMYFGTLNYHDVFQQVPDVIG-------QRLGIFPGYEISVI 224
Cdd:PRK08676 139 AMLIAILSAREN-IDAALK------------YIFIASTAMIFAFIGLIFLFSLTRQALGtgtlnwtELAAHASLLSPSVL 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 225 TMICLLLFFGAMAKSAQVPLHVWLPES-MEGPTPISALIhAATMVTAGIYMVARMSPLFEFSPATLSLILVIGGTTAFFM 303
Cdd:PRK08676 206 GASFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGAAEQFSNVLIGLGIFSI 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 304 GLLA---VVQNDIKRVIAYSTISQLGYMAVALGASAYDA---AIFHLITHAFFKALLFLAAGsvIIALHHEQDMR-KMGG 376
Cdd:PRK08676 285 AVAAfsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLAlfwMLFHMLAHSLVKSGLFFSAG--ILHRQYRSDRFdRIFD 362
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 377 LVSYMPVTYLTFIIGALALSAIPPFSGFYSK-DIIIEAAQLSI-LPGARYAYYCVLASAF 434
Cdd:PRK08676 363 VFRLQPVAAWGVILGSAAIIGMPPFPLFLSKfFILLQLGGISVwLVLAVLLLLLLAASSF 422
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
17-412 |
7.88e-14 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 74.36 E-value: 7.88e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 17 LAAGLLGKTMGRVFTHRLliTLISISFFLSCYLFKIFVINKY-PSTEGVLYT----WATAGMLHFDIALllDPLSVAMTT 91
Cdd:PRK07363 11 LGAIIIGFFPGNLPSARL--RQITLVFAVLVLAWSLFLLTQFdLSDPGMQFQeylpWNEPLGLSYSLGV--DGLSLPLLV 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 92 VVLFVSLmVHIYTVGYMADDPgyQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGFW--FKRETAlsgSL 169
Cdd:PRK07363 87 LNSLLTW-IAIYSIGENTERP--RLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWggEKRGYA---SI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 170 KAFIVNRVGDVGFVLAIAAVLMYFGTLN--YHDVFQQVPDVIGQrlgifpgyeisVITMICLLLFFGAmaKSAQVPLHVW 247
Cdd:PRK07363 161 KFLIYTAVSGLLVLAAFLGIVWLSGSTSfdYDAISTQNLSLNTQ-----------LILLTGLLLGFGI--KIPLVPLHTW 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 248 LPESMEGPTPISALIHAATMVTAGIYMVARMSplFEFSPATLSLI----LVIGGTTAFFMGLLAVVQNDIKRVIAYSTIS 323
Cdd:PRK07363 228 LPDAYTEASPAVAILLGGVLAKLGTYGLLRFG--LQLFPQTWSLVapglAIIGTISVIYGALSAIAQKDIKRMVAYSSIG 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 324 QLGYMAVALGAS---AYDAAIFHLITHAFFKALLFLAAGsVIIALHHEQDMRKMGGLVSY---MPVTYLTFIIGALALSA 397
Cdd:PRK07363 306 HMGYILVAAAAGtqlSLLGAVAQMISHGLILALLFHLVG-IVERKVGTRDLDVLNGLMNPirgLPLTSALLVLAGMASAG 384
|
410
....*....|....*
gi 1085147720 398 IPPFSGFYSKDIIIE 412
Cdd:PRK07363 385 IPGLVGFVAEFIVFQ 399
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
87-404 |
4.78e-13 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 71.88 E-value: 4.78e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 87 VAMTTVVLFVSLMVHIYTVGYMAddpgyQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGFWFKRETALS 166
Cdd:MTH00226 108 IILTGFIVPCSILISWHSVKYLT-----KSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQ 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 167 GSLKAFIVNRVGDVGFVLAIAAVLMYFGTLNYHDVFQQVPDVIGQrlgifpgyeisVITMICLLLFFGAMAKSAQVPLHV 246
Cdd:MTH00226 183 AAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHVVSEQ-----------TQKWIFLGIFLAMAVKIPIFPFHI 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 247 WLPES-MEGPTPISALIhAATMVTAGIYMVARMS-PLFEFSPATLSLILVIGGTTAFFMGLLAVV-QNDIKRVIAYSTIS 323
Cdd:MTH00226 252 WLPKAhVEAPVAGSVLL-AGILLKLGGYGLVRLSwPILPLGAQNLAPAVIAMGIVGIVYGSFATCrQIDVKRLVAYSSVA 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 324 QLGYMAVALGAS---AYDAAIFHLITHAFFKALLFLAAgSVIIALHHEQDMRKMGGLVSYMPVTYLTFIIGALALSAIPP 400
Cdd:MTH00226 331 HMGLVSITLVTHdiiGLTGSIFIMLAHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPP 409
|
....
gi 1085147720 401 FSGF 404
Cdd:MTH00226 410 SGNF 413
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
224-407 |
6.41e-13 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 71.57 E-value: 6.41e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 224 ITMICLLLffGAMAKSAQVPLHVWLPESMEG-PTPISALIHAATMVTAGIYMVARMSPLFEFSPATLSLILVIGGTTAFF 302
Cdd:CHL00049 215 IALIFITV--GIGFKLSLAPFHQWTPDVYEGsPTPVVAFLSVTSKVAASALATRIFDIPFYFSSNEWHLLLEILAILSMI 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 303 MG-LLAVVQNDIKRVIAYSTISQLGYMAVALGASAYDAAIFHLITHAFFKALLFLAAGSVII--ALHHEQD-MRKMGGLV 378
Cdd:CHL00049 293 LGnLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYIFMNLGTFACIVlfGLRTGTDnIRDYAGLY 372
|
170 180
....*....|....*....|....*....
gi 1085147720 379 SYMPVTYLTFIIGALALSAIPPFSGFYSK 407
Cdd:CHL00049 373 TKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
136-399 |
1.45e-12 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 70.09 E-value: 1.45e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 136 NFLLLFFGWEGVGLVSYLLIGFWFKRETALSGSLKAFIVNRVGDVGFVLAIAAVLMYFGTLNYHDVFQQVPDVIGQRLgI 215
Cdd:MTH00204 133 DLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIKLPLSIQKW-L 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 216 FPGYeisvitmiclllFFGAMAKSAQVPLHVWLPES-MEGPTPISALIhAATMVTAGIYMVARMS-PLFEFSPATLS-LI 292
Cdd:MTH00204 212 LVGF------------FLSLAVKIPQIPFHIWLPQAhVEAPVAGSVIL-AGILLKLGGYGFLRFSwPLFPAASEYFApLI 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 293 LVIGGTTAFFMGLLAVVQNDIKRVIAYSTISQLGYMAVALGASAYD---AAIFHLITHAFFKALLFLAAgSVIIALHHEQ 369
Cdd:MTH00204 279 VMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEglvAAVFLMLAHGFVSSALFIAV-TFLYERHHTR 357
|
250 260 270
....*....|....*....|....*....|
gi 1085147720 370 DMRKMGGLVSYMPVTYLTFIIGALALSAIP 399
Cdd:MTH00204 358 LIKYYRGLTLTMPLFVIIMLVLSLANMGFP 387
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
96-404 |
2.36e-12 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 69.82 E-value: 2.36e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 96 VSLMVHIYTVGYmadDPGYQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGFWFKRETAlsgslkAFIVN 175
Cdd:PRK06459 56 VWILASLYSIEY---DHYGKWLSSLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKKNKRP------AFVFM 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 176 RVGDVGFVLAIAAVLMYF---GTLNYHDVFQQVPdvigqrlgifpgyeisvitmiCLLLFFGAMAKSAQVPLHV--WLPE 250
Cdd:PRK06459 127 AFGELSTVLILAGFAWAFiisGTTNFSYLPSPVP---------------------LILASFGFIIKMGMMPFLVseWLPI 185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 251 SMEGPTPISALIHAATMVTAGIYMVARMSPLFEFSPATLS--LILVIGGTTAFFMGLLAVVQNDIKRVIAYSTISQLGYM 328
Cdd:PRK06459 186 AHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGYFglTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAI 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 329 AVALGA--SAYD-----------AAIFHLITHAFFKALLFLAAGSVIIALHHEQDMRKMGglvsympVTYLTFIIGALAL 395
Cdd:PRK06459 266 LVALGLymVTKQlitsiehfsliTVILYSFAHSVAKTGLFLSSGLQEKQSITYSKKIRNR-------WIELGLTLLASSL 338
|
....*....
gi 1085147720 396 SAIPPFSGF 404
Cdd:PRK06459 339 SGLLPNIGG 347
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
76-414 |
4.53e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 68.72 E-value: 4.53e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 76 FDIALLLDPLSVAMTTVVLFVSLMVHIYTvgyMADDPGYQRFFSyvSLFTF-------AMLTLVLANnfLLLFFgwEGVG 148
Cdd:PRK12666 72 FGIVLVLDRLSALMLLLTALLALAALLYA---LAGWDRAGPHFH--ALFQFqlmglngAFLTGDLFN--LFVFF--EVLL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 149 LVSYLLigfwfkretALSGSLKA--------FIVNRVGDVGFVLAIAAVLMYFGTLNYHDVFQQVPDVIGQRLGIFpgye 220
Cdd:PRK12666 143 AASYGL---------LLHGSGRArvraglhyVAINLVASSLFLIGVGLIYGVTGTLNMADLAQRIAQLPAADRALL---- 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 221 isVITMICLLLFFGAmaKSAQVPLHVWLPES-MEGPTPISALIhaATMVTAGIYMVARMSPLFeFSPAT------LSLIL 293
Cdd:PRK12666 210 --EAGAALLLVVFLI--KAAMWPLNFWLPPAyAAASAPVAALF--AIMTKVGIYAILRLSTLL-FGPEAgasagfGQDWL 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 294 VIGG--TTAF-FMGLLAVvqNDIKRVIAYSTISQLGYMAVALG---ASAYDAAIFHLITHAFFKALLFLAAG-------- 359
Cdd:PRK12666 283 LPGGlaTLAFgAIGVLAA--QRLRRLAAYLVLVSSGTLLAAIGlgnPAATAAALYYLVHSTLAAAALFLLADlverqrga 360
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1085147720 360 -----SVIIALHHEQDMRKMGGLVsYMPVTY----LTFIIGALALSAIPPFSGFYSKDIIIEAA 414
Cdd:PRK12666 361 aadrlAVTPELYDLDEEEEEEVGV-AIPATMallgLLFFICALALAGLPPLSGFLGKFALLQAL 423
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
126-439 |
6.86e-12 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 68.15 E-value: 6.86e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 126 FAMLTLVLannFLLLFfgwEGVGLVSYLLIGFWFKRETALSGSLKAFIVNRVGDVGFVLAIAAVLMYFGTLNYHDVFQQV 205
Cdd:MTH00217 126 FTILDLVG---FYILF---EGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCLK 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 206 PDVIGQRLgifpgyeisvitmICLLLFFGAMAKSAQVPLHVWLPES-MEGPTPISALIhAATMVTAGIYMVARMS-PLFE 283
Cdd:MTH00217 200 IEKELQYF-------------IFLGFFLSLAIKIPKIPFHIWLPQAhVEAPVAGSVIL-AGVLLKLGGYGFIRFSwPLLP 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 284 -----FSP--ATLSLILVIGGttaffmGLLAVVQNDIKRVIAYSTISQLGYmaVALGASAYD-----AAIFHLITHAFFK 351
Cdd:MTH00217 266 easeyFSPliQTLSLLAIIYG------SLTTCRQVDLKRIIAYSSVAHMGL--VTLGIFSHTiqglvAAIFLMLAHGLVS 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 352 ALLFLAAgSVIIALHHEQDMRKMGGLVSYMPVTYLTFIIGALALSAIPPFSGFYSKDIIIEAA-QLSILPGARYAYYCVL 430
Cdd:MTH00217 338 SALFIAV-TFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAfEYSYIVGVLASLGMVL 416
|
....*....
gi 1085147720 431 ASAFVTPLY 439
Cdd:MTH00217 417 SAGYSIYLY 425
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
242-410 |
9.12e-12 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 67.80 E-value: 9.12e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 242 VPLHVWLPES-MEGPTPISALIhAATMVTAGIYMVAR--MSPLFEFSPATLSLILVIGGTTAFFMGLLAVVQNDIKRVIA 318
Cdd:PRK06473 222 VPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYGLLRfgVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVA 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 319 YSTISQLGYMAVALGAS---AYDAAIFHLITHAFFKALLFLAAGsVIIALHHEQDMRKMGGLVSY---MPVTYLTFIIGA 392
Cdd:PRK06473 301 YSSIGHMGYILLAAAAAtplSILAAVFQMISHGLISALLFLLVG-VVYKKTGSRDVDVLRGLLNPergLPITGSLMILGV 379
|
170
....*....|....*...
gi 1085147720 393 LALSAIPPFSGFYSKDII 410
Cdd:PRK06473 380 MASAGIPGMVGFIAEFLV 397
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
34-400 |
1.78e-10 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 63.61 E-value: 1.78e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 34 LLITLISISFFLSCYLFKI-FVINKYPSTEGVLYTWATAGMLH-FDIALLLDPLSVAMTTVVLFVSLMVHIYTVGYMADD 111
Cdd:MTH00014 7 PLISLLLLPLIKYPWSWALtFSTLLLLSLFTLLNLYPMSAPYSmFTESLSSDMLSAPLITLTLWITALMILASFKIFQNN 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 112 PGYQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGFWFKRETALSGSLKAFIVNRVGDVGFVLAIAAVLM 191
Cdd:MTH00014 87 KAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFY 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 192 YFGTLNYhdvfqqvpdvigqrlgIFPGYEISVITMICLLLFFGAMAKSAQVPL---HVWLPES-MEGPTPISaLIHAATM 267
Cdd:MTH00014 167 TNNSLSM----------------LMSSMEPPSIYLMNLWWLITILAFMVKMPLytvHLWLPKAhVEAPVAGS-MILAGIL 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 268 VTAGIYMVARMSPLFEF-SPATLSLILVIGGTTAFFMGLLAVVQNDIKRVIAYSTISQLGYMAVALGAS---AYDAAIFH 343
Cdd:MTH00014 230 LKLGGYGLLRMSSLFMHiNKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNtswGWQGALAM 309
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1085147720 344 LITHAFFKALLFLAAGSViIALHHEQDMRKMGGLVSYMPVTYLTFIIGALALSAIPP 400
Cdd:MTH00014 310 MIAHGLCSSALFALANMT-YETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPP 365
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
123-435 |
6.79e-10 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 61.20 E-value: 6.79e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 123 LFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGFWFKRETALSGSLKAFIVNRVGDVGFVLAIAavLMYFGTLNYHDVF 202
Cdd:MTH00196 1 MVALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLKYFVLGALSSGLFLFGCA--LLCGTTGGLHLSY 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 203 QQVPDVIGQRLGIFpGYEISVITMICLLLFfgamaKSAQVPLHVWLPESMEG-PTPISALIhaATMVTAGIYmvarmSPL 281
Cdd:MTH00196 79 INLVLNSGQSFSSV-SVPIGYLLIIVALLF-----KLSVAPFHMWAPDVYEGaPTKTTALL--AIVPKLGIF-----SIL 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 282 FEFSPATLslILVIGGTTAFFMGLL-AVVQNDIKRVIAYSTISQLGYMAVALGASAYD---AAIFHLITHAFFKALLFla 357
Cdd:MTH00196 146 VSIGLNVN--ILLIGGLFSLFVGAIgALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFEsiqASLVYLFIYIIMSICVF-- 221
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1085147720 358 agSVIIALHHEQDMR-KMGGLVSYMPVTYLTFIIGALALSAIPPFSGFYSKDIIieaaqlsILPGARYAYYCVLASAFV 435
Cdd:MTH00196 222 --SIILALNVYKNLIiEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLI-------LLSGVVYQYYLIFLLAVF 291
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
228-412 |
1.06e-09 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 60.61 E-value: 1.06e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 228 CLLLFFGAMAKSAQVPLHVWLPESMEGPTPISALIHAATMVTAGIYMVARMSPLFEFSPATLSLIL--VIGGttafFMGL 305
Cdd:MTH00112 95 CTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAILstLIGG----WGGL 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 306 lavVQNDIKRVIAYSTISQLGYMAVALgASAYDAAIFHLITHAFFKALLFLaagsvIIALHHEQDMRKMGGLVSYMPVTY 385
Cdd:MTH00112 171 ---NQTQLRKIMAFSSIAHLGWMIAII-TYSPKLTLLTFYIYILMTTPMFL-----TLNTTSTKTLKDMMTSWTKSPTLN 241
|
170 180
....*....|....*....|....*..
gi 1085147720 386 LTFIIGALALSAIPPFSGFYSKDIIIE 412
Cdd:MTH00112 242 TTLMLTLLSLAGLPPLTGFMPKWLILQ 268
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
229-412 |
1.38e-09 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 60.18 E-value: 1.38e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 229 LLLFFGAMAKSAQVPLHVWLPESMEGPTPISALIHAATMvtagiyMVARMSPLFEFSPAT-LSLILVIGGTTAFFMGLLA 307
Cdd:MTH00011 92 LMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQ------KIAPLSILFFFTSHNiLPMMTSMAAMSALAGGLGG 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 308 VVQNDIKRVIAYSTISQLGYMAVALgASAYDAAIFHLITHAFFKALLFLAAGSVIIalhheQDMRKMGGLVSYMPVTYLT 387
Cdd:MTH00011 166 MNQTQLRPLLAYSSIGHMGWMTMIS-VFSPSMAILYFMTYIIITTPLMLLFAYLNA-----FSTKFNSKISSMSQTTSMS 239
|
170 180
....*....|....*....|....*
gi 1085147720 388 FIIGALALSAIPPFSGFYSKDIIIE 412
Cdd:MTH00011 240 LFIMLLSLGGLPPFTGFMPKLMAIE 264
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
123-410 |
2.45e-09 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 59.96 E-value: 2.45e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 123 LFTFAMLT-------LVLANNFLLLFFGWEGVGLVSYLLIGFWFKRETALSGSlkAFIVNRVGDVGFVLAIAAVLMYFG- 194
Cdd:CHL00011 113 LFYFLMLAmysgqigLFSSRDLLLFFIMWELELIPVYLLLSMWGGKKRLYSAT--KFILYTAGGSIFLLIGVLGMGLYGs 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 195 ---TLNYHDVFQQvpdvigqrlgifpGYEISViTMICLLLFFGAMA-KSAQVPLHVWLPEsmegpTPISAliHAAT-MVT 269
Cdd:CHL00011 191 nepTLNFETLANQ-------------SYPVAL-EILFYIGFLIAYAvKLPIIPLHTWLPD-----THGEA--HYSTcMLL 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 270 AGI------YMVARMSplFEFSPATLSL----ILVIGGTTAFFMGLLAVVQNDIKRVIAYSTISQLGYMAVALGA---SA 336
Cdd:CHL00011 250 AGIllkmgaYGLIRIN--MELLPHAHSIfspwLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSitdTG 327
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1085147720 337 YDAAIFHLITHAFFKALLFLAAGSV---IIALHHEQdmrkMGGLVSYMPVTYLTFIIGALALSAIPPFSGFYSKDII 410
Cdd:CHL00011 328 LNGAILQIISHGFIGAALFFLAGTSydrIRLVYLDE----MGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIV 400
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
218-411 |
7.94e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 54.51 E-value: 7.94e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 218 GYEISVITMICLLLFFGAMAKSAQVPLHVWLPESMEGPTPISALIHAATMVTAGIYMVarmsPLFEFSPATLSLILVIGG 297
Cdd:MTH00144 77 MYNLSFSWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLL----SNFLDLYWLAYLLCVISV 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 298 TTAFFMGLLAVVQNDIKRVIAYSTISQLGYMAVALGASAYdaaifhlITHAFFKALLFLAAGSVIIALHHEQDMRKMGGL 377
Cdd:MTH00144 153 LSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSW-------LMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGS 225
|
170 180 190
....*....|....*....|....*....|....
gi 1085147720 378 VSYMPVTYLTFIIGALALSAIPPFSGFYSKDIII 411
Cdd:MTH00144 226 LKPSYKTGLSIISLLLSLGGLPPFLGFCSKLLVL 259
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
127-407 |
1.57e-07 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 54.29 E-value: 1.57e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 127 AMLtLVLANNFLLLFFGWEGVGLVSYLLIGFwFKRETALS-GSLKAFIVNRvgdvgfvlAIAAVLMYFGTLNYH-DVFQQ 204
Cdd:PRK02504 123 GMF-LSGATELVMIFISLETLSIASYLLTGY-MKRDPRSNeAALKYLLIGA--------ASSAIFLYGSSLLYGlSGGST 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 205 VPDVIGQRLGIFPgyeiSVITMICLLLFFGAMA-KSAQVPLHVWLPESMEG-PTPISALIHAATMvTAGIYMVAR-MSPL 281
Cdd:PRK02504 193 QLSAIALALITSP----SLGLALALVFVIAGIAfKISAVPFHQWTPDVYEGsPTPVVAFLSVGSK-AAGFALAIRlLVTA 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 282 FEFSPATLSLILVIGGTTAFFMG-LLAVVQNDIKRVIAYSTISQLGYMAVALGA---SAYDAAIFHLITH------AFFK 351
Cdd:PRK02504 268 FPSFDEQWKLLFTALAILSMVLGnVVALAQTSMKRMLAYSSIGQAGFVMIGLVAgteAGYASMVFYLLAYlfmnlgAFAC 347
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1085147720 352 ALLF-LAAGSVIIAlhheqdmrKMGGLVSYMPVTYLTFIIGALALSAIPPFSGFYSK 407
Cdd:PRK02504 348 VILFsLRTGTDQIS--------DYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
229-410 |
2.57e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 53.58 E-value: 2.57e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 229 LLLFFGAMAKSAQVPLHVWLPESMEgptpiSALIHAATMVTAGIYMVARMSPLFEFSPAtlSLILVIGGTTAFFMGLLAV 308
Cdd:PRK12664 148 LLFMLGLLINCACFPASSWVVDAYP-----AASNFGIIVLSLFTTKVAALVLLLFFSGE--EILLFLGIITAIYGIIFAS 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 309 VQNDIKRVIAYSTISQLGYMAVALGAS-----AYDAAIFHLITHAFFKALLFLAAGSVIIALHHeQDMRKMGGLVSyMPV 383
Cdd:PRK12664 221 LEQNIRRLLCYNVVGQMGLLIIAIGFSgssgvAIGILILQIVLSVVYQTLLFMVADSVINRTRK-FNLNRVGGLFK-MSL 298
|
170 180
....*....|....*....|....*..
gi 1085147720 384 TYLTFIIGALALSAIPPFSGFYSKDII 410
Cdd:PRK12664 299 EAMCCIIAILNMGAFPGTAGFVSKSLI 325
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
13-406 |
5.63e-07 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 52.40 E-value: 5.63e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 13 LIGTLAAGLL--GKTMGRVFTHRLLITLisISFFLSCYLFkifvINKY-PSTEGVL----YTWATAGMLHFDIAllLDPL 85
Cdd:PRK02546 17 IVAALLIPFIpdKGDGKTVRWYALIVGL--IDFLITVYAF----YTGYdFSNPGLQlvesYSWLPQLGLTWSVG--ADGL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 86 SVAMTTVVLFvslmvhIYTVGYMADDPGY--QRFFSYVSLFTFAMLTLVLANNFLLLFF-GWEGVGLVSYLLIGFW--FK 160
Cdd:PRK02546 89 SMPLILLTGF------ITTLAVLAAWPVTfkPKLFYFLMLAMYGGQIAVFAVQDMLLFFlAWELELIPVYLLLAIWggKK 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 161 RETALSgslkAFIVNRVGDVGFVLAIAAVLMYFG---TLNYHDVFQQvpdvigqrlGIFPGYEIsvITMICLLLFFGamA 237
Cdd:PRK02546 163 RQYAAT----KFILYTAGSSLFILLAALAMAFYGdtpTFDMTALAAK---------DFGLGFQL--LCYAGLLIAYG--V 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 238 KSAQVPLHVWLPESM-EGPTPISALIhAATMVTAGIYMVARMSPLF------EFSPatlsLILVIGGTTAFFMGLLAVVQ 310
Cdd:PRK02546 226 KLPIVPLHTWLPDAHgEATAPVHMLL-AGILLKMGGYALLRMNAGMlpdahaQFAP----LLIVLGVVNIIYAALTSFAQ 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 311 NDIKRVIAYSTISQLGYMAVALG---ASAYDAAIFHLITHAFFKALLFLAAGSVIIALHHEQdMRKMGGLVSYMPVTYLT 387
Cdd:PRK02546 301 RNLKRKIAYSSISHMGFVLIGIGsftDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLM-LDEMGGVGQKMRKMFAM 379
|
410
....*....|....*....
gi 1085147720 388 FIIGALALSAIPPFSGFYS 406
Cdd:PRK02546 380 WTACSLASLALPGMSGFVA 398
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
113-411 |
6.16e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 52.33 E-value: 6.16e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 113 GYQRFFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGFwfKRETALS--GSLKAFIVNRVGDVGFVLAIAAVL 190
Cdd:MTH00199 95 GGQSSPILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVAL--KRDSAYSteAGLKYFVLGAVSSGLFLFGCALLY 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 191 MYFGTLNYHDVFQQVPDVIGQRLgifpgyeisvITMIclLLFfgamaKSAQVPLHVWLPESMEG-PTPISALIhaATMVT 269
Cdd:MTH00199 173 GLTGETSIQGINSILTGDVGKIL----------ITIS--LLF-----KLSAAPFHMWAPDVYEGaPTITTALL--ATVPK 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 270 AGIYmvarmSPLFEFSPATlSLILVIGGTTAFFMGLLAVVQNDIKRVIAYSTISQLGYM--AVALG------ASAYDAAI 341
Cdd:MTH00199 234 IGVF-----SILVQIGPVT-NVVLICAVLSIIYGAIGALNQTKIKRLLAYSGIGHMGFIlfGVAIGsfesiqASLIYMII 307
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 342 FHLITHAFFKALLFLAAGSVIIAlhheqdmrKMGGLVSYMPVTYLTFIIGALALSAIPPFSGFYSKDIII 411
Cdd:MTH00199 308 YVIMSICSFSIILSLKLTKGLIV--------EVSGLSRKNPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
228-411 |
2.95e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 46.87 E-value: 2.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 228 CLLLFfgaMAKSAQVPLHVWLPESMEGPTPISALIHAATMVTAGIYMVARMSPLFEFSPATLSLILVIGGTTAFFM-GLL 306
Cdd:MTH00127 200 CLLAF---LVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYPFIILALWGIIMtGSI 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 307 AVVQNDIKRVIAYSTISQLGYMAVALGAS---AYDAAIFHLITHAFFKALLFLAAGSViIALHHEQDMRKMGGLVSYMPV 383
Cdd:MTH00127 277 CLRQTDLKSLIAYSSVSHMGLVAGGILIQtpwGFTGALILMIAHGLTSSALFCLANTN-YERTHSRTMLLARGLQMILPL 355
|
170 180
....*....|....*....|....*...
gi 1085147720 384 TYLTFIIGALALSAIPPFSGFYSKDIII 411
Cdd:MTH00127 356 MATWWFIASLANLALPPLPNLMGELMII 383
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
117-328 |
3.37e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 46.70 E-value: 3.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 117 FFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGFWFKREtALSGSLKAFIVNRVGDVGFVLAIAAVLMYFGTL 196
Cdd:PRK06591 117 FYGILLFAHTGYLGMIATNDFFNLYVFIEISALSSYVLIASGNNPK-SLIGAFDYLIMGSIGATLILIAIGFLLSITGSL 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 197 NYHDVFQQVPDVIGQRlgifpgyeisVITMICLLLFFGAMAKSAQVPLHVWLPESMEGPTPISALIHAATMVTAGIYMVA 276
Cdd:PRK06591 196 NMTDIAAYLQEHTNSR----------IITIAIGFFLIGAILKTAFFPMHFWMMRAYNNTASVILVYLAGISTIIGIYIIY 265
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1085147720 277 RMSPLF----EFSPATLSLILVIGGTTAFFMGLLAVVQNDIKRVIAYSTISQLGYM 328
Cdd:PRK06591 266 KFTYIIigyeTIKTAITNFIRPIALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYV 321
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
72-411 |
9.40e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 45.32 E-value: 9.40e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 72 GMLHFDIALLLDPLSVAMTTVVLFVSLMVHIYTVGYMADDPG-YQRffSYVSLFTFAMLTLVL---ANNFLLLFFGWEGV 147
Cdd:MTH00206 47 GWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQNHMKNEPInRQR--IYITLLIVLQLFLILffsSSNLLLFYILFEAS 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 148 GLVSYLLIGFWFKRETALSGSLKAFIVNRVGDVGFVLAIAAVLMYFGTLnYHDVFQqvpdvigqrlgiFPGYEISVITMI 227
Cdd:MTH00206 125 LIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSL-SLYILY------------FSKLTTWNNNLW 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 228 CLLLFFGAMAKSAQVPLHVWLPES-MEGPTPISaLIHAATMVTAGIYMVARMSPLFEFSPATLSLILVIGGT-TAFFMGL 305
Cdd:MTH00206 192 WLACILAFLVKLPLYGVHLWLPKAhVEAPVAGS-MVLAGVLLKLGGYGMMRIILILGPSTKLSSYFFIILGLwGSIMTSS 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 306 LAVVQNDIKRVIAYSTISQLGYMAVALGAS---AYDAAIFHLITHAFFKALLFlAAGSVIIALHHEQDMRKMGGLVSYMP 382
Cdd:MTH00206 271 ICLRQTDLKSLIAYSSVSHMSLVTAGILSGspwGFKGALLLMIAHGLVSSALF-CLANLLYERSHTRTILGNRGLQMILP 349
|
330 340
....*....|....*....|....*....
gi 1085147720 383 VTYLTFIIGALALSAIPPFSGFYSKDIII 411
Cdd:MTH00206 350 LLSFWWLLFFLANLGLPPFPNLFGELLII 378
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
238-434 |
1.37e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 44.85 E-value: 1.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 238 KSAQVPLHVWLPESMEG-PTPISALIHAATMVTAGIYMVAR-MSPLFEFSPATLSLILVIGGttaffmgllAVVQNDIKR 315
Cdd:MTH00198 312 KLAAAPFHMWTPDVYEGaPTPTTALIAIIPKFTVYILLTSLvITSKLLLSVAIISLVVGAFG---------ALNQTRIKR 382
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 316 VIAYSTISQLGYMAVALGASAYD--------AAIFHLITHAFFKALLFLAAGSVIIALHHEQDMRKMGG----------- 376
Cdd:MTH00198 383 LLAYSGIGHIGFILIGVSAGTYEslqaswtyAVTYLVSALASFTVICTLEEFGTRTPTSRQRDGSFGNYnlvrrlvdlti 462
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1085147720 377 LVSYMPVTYLTFIIGALALSAIPPFSGFYSKDII----IEAAQLSILP----GARYAYYCVLASAF 434
Cdd:MTH00198 463 LSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFIlvgsIKIAFSSSLSiyylVALFAIICTCISAF 528
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
141-411 |
2.07e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 43.80 E-value: 2.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 141 FFGWEGVGLVSYLLIGFWFKRE--TALSGSLKAFIVNrvgdvgfvlAIAAVLMYFGTLNYHDVFQQvpdvigqrLGIFPG 218
Cdd:MTH00200 27 FLIWLGLEINTLAIIPLLIKQHhpRKVEATTKYFIIQ---------ATASALLLFGGLLNAWTSGQ--------WGISEM 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 219 YEISVITMICLLLFFgamaKSAQVPLHVWLPESMEGPTPISALIHAATMVTAGIYMVARMSPLfefspATLSLILVIGGT 298
Cdd:MTH00200 90 LGPLSETLILLALAL----KLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPA-----LNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 299 TAFFMGLLAVVQNDIKRVIAYSTISQLGYMAVALGASAYDAAIFHLithaffkaLLFLAAGSVIIALH--HEQDMRKMGG 376
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLL--------LYVIITLTVFLLLNllNSTKINSLSS 232
|
250 260 270
....*....|....*....|....*....|....*
gi 1085147720 377 LVSYMPVTYLTFIIGALALSAIPPFSGFYSKDIII 411
Cdd:MTH00200 233 SKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLIL 267
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
225-412 |
2.19e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 43.76 E-value: 2.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 225 TMICLLLFFGAMAKSAQVPLHVWLPESMEGPTPISALIhaatMVTAgiYMVARMSPLFEFSPATLSLILVIggttaffMG 304
Cdd:MTH00070 92 PLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLI----LSTW--QKLAPMALLIQISHLLNSNLLII-------MG 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 305 LLAVV--------QNDIKRVIAYSTISQLGYMAVALGAS----AYDAAIFHLITHAFFKALLFLAAGSviialhheqdMR 372
Cdd:MTH00070 159 LLSTLiggwgglnQTQLRKIMAYSSIAHLGWMIIILTFSphltLLNLLIYLIMTSSMFLMLMNLNSTN----------IN 228
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1085147720 373 KMGGLVSYMPVTYLTFIIGALALSAIPPFSGFYSKDIIIE 412
Cdd:MTH00070 229 KLSSSWSKNPTLTSMMMLTLLSLGGLPPTTGFIPKWLILQ 268
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
219-421 |
2.54e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 43.51 E-value: 2.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 219 YEISVITMICLLLFFGAMAKSAQVPLHVWLPESMEGPTPISALIHAATMVTAGIYMVARMSPLFefspatlSLILVIGGT 298
Cdd:MTH00197 73 SNLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSF-------MGLLICSVL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 299 TAFFMGLLAVVQNDIKRVIAYSTISQLGYMAVALGASAyDAAIFHLITHAFFKALLFLaagsvIIALHHEQDMRKMGGLV 378
Cdd:MTH00197 146 SSLIGGIGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSP-SIFMLYYLIYFVIMFMLFL-----FLSKNNLSSLNQQYSNP 219
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 1085147720 379 SYMPVTYLTFIIGALALSAIPPFSGFYSKDIIIEAAQLSILPG 421
Cdd:MTH00197 220 ESMSSNLVFLGLSFLSLGGLPPLSGFFLKWLILTSLLSSNISL 262
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
228-411 |
4.17e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 43.37 E-value: 4.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 228 CLLLFfgaMAKSAQVPLHVWLPES-MEGPTPISaLIHAATMVTAGIYMVARMSPLFEFSPATLSLILVIGGTTAFFM-GL 305
Cdd:MTH00068 199 CLLAF---MVKMPLYGLHLWLPKAhVEAPIAGS-MILAAVLLKLGGYGILRISILLTPLSKELSYPFIILALWGVLMtSL 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 306 LAVVQNDIKRVIAYSTISQLGYMAVALGAS---AYDAAIFHLITHAFFKALLFLAAGSViIALHHEQDMRKMGGLVSYMP 382
Cdd:MTH00068 275 ICLRQTDLKSLIAYSSVSHMGLVIAAALIQtpwSFSGAIILMISHGLTSSALFCLANTN-YERTHSRTLLLLRGAQTILP 353
|
170 180
....*....|....*....|....*....
gi 1085147720 383 VTYLTFIIGALALSAIPPFSGFYSKDIII 411
Cdd:MTH00068 354 LMATWWLLSNLSNMALPPSPNLWGELTIM 382
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
115-358 |
5.66e-04 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 43.04 E-value: 5.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 115 QR-FFSYVSLFTFAMLTLVLANNFLLLFFGWEGVGLVSYLLIGFWFKRETALSGSLKAFIVNRVGDVGFVLAIAAVLMYF 193
Cdd:MTH00044 93 QRtFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYSSS 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 194 GTLNyhdvfqqVPDVIGQRLGIFPGYEISVITMICLLLFFGAMaksaqvP---LHVWLPES-MEGPTPISaLIHAATMVT 269
Cdd:MTH00044 173 SSLS-------IPLSELNWLTSLSSNSSSIWWIFCILAFLVKM------PiygFHLWLPKAhVEAPVAGS-MILAAILLK 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 270 AGIYMVARMSPLFEFSPAT-LSLILVIGGT-TAFFMGLLAVVQNDIKRVIAYSTISQLGYMAVA---LGASAYDAAIFHL 344
Cdd:MTH00044 239 LGGYGLIRLINLFSLPSANnISFILIVFCCwGALITSIICLRQTDLKALIAYSSVGHMSLVAAGifsGTNWGINGALILM 318
|
250
....*....|....
gi 1085147720 345 ITHAFFKALLFLAA 358
Cdd:MTH00044 319 IAHGLVSSALFCLA 332
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
243-412 |
5.68e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 39.53 E-value: 5.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 243 PLHVWLPESMEGPTPISALIhaatmvTAGIYMVARMSPLFEFSPATLSLILVIGGTTAFFMG-LLAVVQNDIKRVIAYST 321
Cdd:MTH00041 110 PCHFWFPDVLQGLPFLQGLI------IATWQKIAPLILLISISNLLNSNILILCGILSVLVGgWGGLNQTQTRKILAFSS 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1085147720 322 ISQLGYMAVALGASAYdAAIFHLITHAFFKALLFLaagsvIIALHHEQDMRKMGGLVSYMPVTYLTFIIGALALSAIPPF 401
Cdd:MTH00041 184 IAHLGWIIITSAYSPN-ASIIMFLIYIIINTSIFL-----IGNNFSLSTLSHLNKLSQLNPISAFLFILSILSLGGLPPL 257
|
170
....*....|.
gi 1085147720 402 SGFYSKDIIIE 412
Cdd:MTH00041 258 TGFLNKFISLY 268
|
|
| |
