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Conserved domains on  [gi|33286430|ref|NP_877392|]
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large neutral amino acids transporter small subunit 2 isoform b [Homo sapiens]

Protein Classification

amino acid permease( domain architecture ID 1000062)

amino acid permease facilitates the transport of amino acids, similar to solute carrier family 7 (SLC7) members

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
2A0308 super family cl30119
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
 1-294 9.83e-162

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


The actual alignment was detected with superfamily member TIGR00911:

Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 461.14  E-value: 9.83e-162
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430     1 MGIVQICKGEYFWLEPKNAFENFqEPDIGLVALAFLQGSFAYGGWNFLNYVTEELVDPYKNLPRAIFISIPLVTFVYVFA 80
Cdd:TIGR00911 208 TGWVQLGKGGVESLNPKNAFEGT-ETSAGGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIIISMPIVTFIYVLT 286

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430    81 NVAYVTAMSPQELLASNAVAVTFGEKLLGVMAWIMPISVALSTFGGVNGSLFTSSRLFFAGAREGHLPSVLAMIHVKRCT 160
Cdd:TIGR00911 287 NIAYFTVLSPEELLASLAVAVDFGERLLGVMSWAMPALVGLSCFGSVNGSLFSSSRLFFVGGREGHLPSLLSMIHVKRLT 366

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430   161 PIPALLFTCISTLLMLVTSDMYTLINYVGFINYLFYGVTVAGQIVLRWKKPDIPRPIKINLLFPIIYLLFWAFLLVFSLW 240
Cdd:TIGR00911 367 PLPSLLIVCTLTLLMLFSGDIYSLINLISFANWLFNALAVAGLLWLRYKRPEMNRPIKVPLFFPVFFLLSCLFLIILSLY 446

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 33286430   241 SEPVVCGIGLAIMLTGVPVYFLGVYWQHKPKCFSDFIELLTLVSQKMCVVVYPE 294
Cdd:TIGR00911 447 SPPVGCGVGFIIMLTGVPVYFFGVWWQNKPKWFRYLIVSKTVLLQKVLEVVKPQ 500
 
Name Accession Description Interval E-value
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
 1-294 9.83e-162

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 461.14  E-value: 9.83e-162
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430     1 MGIVQICKGEYFWLEPKNAFENFqEPDIGLVALAFLQGSFAYGGWNFLNYVTEELVDPYKNLPRAIFISIPLVTFVYVFA 80
Cdd:TIGR00911 208 TGWVQLGKGGVESLNPKNAFEGT-ETSAGGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIIISMPIVTFIYVLT 286

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430    81 NVAYVTAMSPQELLASNAVAVTFGEKLLGVMAWIMPISVALSTFGGVNGSLFTSSRLFFAGAREGHLPSVLAMIHVKRCT 160
Cdd:TIGR00911 287 NIAYFTVLSPEELLASLAVAVDFGERLLGVMSWAMPALVGLSCFGSVNGSLFSSSRLFFVGGREGHLPSLLSMIHVKRLT 366

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430   161 PIPALLFTCISTLLMLVTSDMYTLINYVGFINYLFYGVTVAGQIVLRWKKPDIPRPIKINLLFPIIYLLFWAFLLVFSLW 240
Cdd:TIGR00911 367 PLPSLLIVCTLTLLMLFSGDIYSLINLISFANWLFNALAVAGLLWLRYKRPEMNRPIKVPLFFPVFFLLSCLFLIILSLY 446

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 33286430   241 SEPVVCGIGLAIMLTGVPVYFLGVYWQHKPKCFSDFIELLTLVSQKMCVVVYPE 294
Cdd:TIGR00911 447 SPPVGCGVGFIIMLTGVPVYFFGVWWQNKPKWFRYLIVSKTVLLQKVLEVVKPQ 500
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
26-262 6.48e-45

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 158.91  E-value: 6.48e-45
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430  26 PDIGLVALAFLQGSFAYGGWNFLNYVTEELVDPYKNLPRAIFISIPLVTFVYVFANVAYVTAMSPQELLASNAVAVTFGE 105
Cdd:COG0531 186 GGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLIVGVLYILVSLALTGVVPYDELAASGAPLADAAE 265

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430 106 KLLG-VMAWIMPISVALSTFGGVNGSLFTSSRLFFAGAREGHLPSVLAMIHVKRCTPIPALLFTC-ISTLLMLVTSDMY- 182
Cdd:COG0531 266 AVFGpWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLPKVFAKVHPRFGTPVNAILLTGvIALLLLLLGAASFt 345

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430 183 TLINYVGFINYLFYGVTVAGQIVLRWKKPDIPRPIKINL-LFPIIYLLFWAFLLVFSLWSEPVvcgIGLAIMLTGVPVYF 261
Cdd:COG0531 346 ALASLASVGVLLAYLLVALAVIVLRRRRPDLPRPFRVPLpLIPILGILLCLFLLYLLGPGALL---IGLVLLAIGLLLYL 422


                .
gi 33286430 262 L 262
Cdd:COG0531 423 L 423
AA_permease_2 pfam13520
Amino acid permease;
15-237 2.41e-25

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 105.08  E-value: 2.41e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430    15 EPKNAFENFQEPDIGLVALAFLQGSFAYGGWNFLNYVTEElvDPYKNLPRAIFISIPLVTFVYVFANVAYVTAMSPQELL 94
Cdd:pfam13520 174 LLSGEWHTFFPDGWPGVFAGFLGVLWSFTGFESAANVSEE--VKKRNVPKAIFIGVIIVGVLYILVNIAFFGVVPDDEIA 251

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430    95 ASN----AVAVTFGEKLLGVMAWIMPISVALSTFGGVNGSLFTSSRLFFAGAREGHLPSVLAMIHV-KRCTPIPALLFTC 169
Cdd:pfam13520 252 LSSglgqVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPFSRFFAKVnKFGSPIRAIILTA 331

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 33286430   170 ISTLLM-----LVTSDMYTLINYVGFINYLFYGVTVAGQIVLRWKKPDIPRPIKINL--LFPIIYLLFWAFLLVF 237
Cdd:pfam13520 332 ILSLILlllflLSPAAYNALLSLSAYGYLLSYLLPIIGLLILRKKRPDLGRIPGRWPvaIFGILFSLFLIVALFF 406
frlA PRK11357
amino acid permease;
39-261 6.15e-09

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 56.79  E-value: 6.15e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430   39 SFAYGGWNFLNYVTEELVDPYKNLPRAIFISIPLVTFVYVFANVAYVTAMSPQELLASN---AVAVTFGEKLLGVMAWIM 115
Cdd:PRK11357 205 SWSYTGMASICYMTGEIKNPGKTMPRALIGSCLLVLVLYTLLALVISGLMPFDKLANSEtpiSDALTWIPALGSTAGIFV 284

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430  116 PISVALSTFGGVNGSLFTSSRLFFAGAREGHLPSVLAMIHVKRCTPIPALLFTCISTLLMLVTSDMYTLINYVGFINYLF 195
Cdd:PRK11357 285 AITAMIVILGSLSSCVMYQPRLEYAMAKDNLFFKCFGHVHPKYNTPDVSIILQGALGIFFIFVSDLTSLLGYFTLVMCFK 364

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 33286430  196 YGVTVAGQIVLR--------WKKPdiPRPIKINLLFPIIYLLFWAFLlvfsLWSEPVVCGIGLAIMLTGVPVYF 261
Cdd:PRK11357 365 NTLTFGSIIWCRkrddykplWRTP--AFGLMTTLAIASSLILVASTF----VWAPIPGLICAVIVIATGLPAYA 432
 
Name Accession Description Interval E-value
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
 1-294 9.83e-162

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 461.14  E-value: 9.83e-162
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430     1 MGIVQICKGEYFWLEPKNAFENFqEPDIGLVALAFLQGSFAYGGWNFLNYVTEELVDPYKNLPRAIFISIPLVTFVYVFA 80
Cdd:TIGR00911 208 TGWVQLGKGGVESLNPKNAFEGT-ETSAGGIVLAFYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAIIISMPIVTFIYVLT 286

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430    81 NVAYVTAMSPQELLASNAVAVTFGEKLLGVMAWIMPISVALSTFGGVNGSLFTSSRLFFAGAREGHLPSVLAMIHVKRCT 160
Cdd:TIGR00911 287 NIAYFTVLSPEELLASLAVAVDFGERLLGVMSWAMPALVGLSCFGSVNGSLFSSSRLFFVGGREGHLPSLLSMIHVKRLT 366

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430   161 PIPALLFTCISTLLMLVTSDMYTLINYVGFINYLFYGVTVAGQIVLRWKKPDIPRPIKINLLFPIIYLLFWAFLLVFSLW 240
Cdd:TIGR00911 367 PLPSLLIVCTLTLLMLFSGDIYSLINLISFANWLFNALAVAGLLWLRYKRPEMNRPIKVPLFFPVFFLLSCLFLIILSLY 446

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 33286430   241 SEPVVCGIGLAIMLTGVPVYFLGVYWQHKPKCFSDFIELLTLVSQKMCVVVYPE 294
Cdd:TIGR00911 447 SPPVGCGVGFIIMLTGVPVYFFGVWWQNKPKWFRYLIVSKTVLLQKVLEVVKPQ 500
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
26-262 6.48e-45

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 158.91  E-value: 6.48e-45
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430  26 PDIGLVALAFLQGSFAYGGWNFLNYVTEELVDPYKNLPRAIFISIPLVTFVYVFANVAYVTAMSPQELLASNAVAVTFGE 105
Cdd:COG0531 186 GGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLIVGVLYILVSLALTGVVPYDELAASGAPLADAAE 265

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430 106 KLLG-VMAWIMPISVALSTFGGVNGSLFTSSRLFFAGAREGHLPSVLAMIHVKRCTPIPALLFTC-ISTLLMLVTSDMY- 182
Cdd:COG0531 266 AVFGpWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLPKVFAKVHPRFGTPVNAILLTGvIALLLLLLGAASFt 345

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430 183 TLINYVGFINYLFYGVTVAGQIVLRWKKPDIPRPIKINL-LFPIIYLLFWAFLLVFSLWSEPVvcgIGLAIMLTGVPVYF 261
Cdd:COG0531 346 ALASLASVGVLLAYLLVALAVIVLRRRRPDLPRPFRVPLpLIPILGILLCLFLLYLLGPGALL---IGLVLLAIGLLLYL 422


                .
gi 33286430 262 L 262
Cdd:COG0531 423 L 423
AA_permease_2 pfam13520
Amino acid permease;
15-237 2.41e-25

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 105.08  E-value: 2.41e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430    15 EPKNAFENFQEPDIGLVALAFLQGSFAYGGWNFLNYVTEElvDPYKNLPRAIFISIPLVTFVYVFANVAYVTAMSPQELL 94
Cdd:pfam13520 174 LLSGEWHTFFPDGWPGVFAGFLGVLWSFTGFESAANVSEE--VKKRNVPKAIFIGVIIVGVLYILVNIAFFGVVPDDEIA 251

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430    95 ASN----AVAVTFGEKLLGVMAWIMPISVALSTFGGVNGSLFTSSRLFFAGAREGHLPSVLAMIHV-KRCTPIPALLFTC 169
Cdd:pfam13520 252 LSSglgqVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPFSRFFAKVnKFGSPIRAIILTA 331

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 33286430   170 ISTLLM-----LVTSDMYTLINYVGFINYLFYGVTVAGQIVLRWKKPDIPRPIKINL--LFPIIYLLFWAFLLVF 237
Cdd:pfam13520 332 ILSLILlllflLSPAAYNALLSLSAYGYLLSYLLPIIGLLILRKKRPDLGRIPGRWPvaIFGILFSLFLIVALFF 406
AA_permease pfam00324
Amino acid permease;
18-239 7.49e-16

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 78.13  E-value: 7.49e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430    18 NAFENFQEPDIGL-VALAFLQGSFAYGGWNFLNYVTEELVDPYKNLPRAIFISIPLVTFVYVFANVAYVTAMSPQELLAS 96
Cdd:pfam00324 178 NGGKNNFPPGFGKgFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFYILSLLAIGLLVPWNDPGLL 257

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430    97 NAVAVTFG-----EKLLGVMAW--IMPISVALSTFGGVNGSLFTSSRLFFAGAREGHLPSVLAmIHVKRCTPIPALLFTC 169
Cdd:pfam00324 258 NDSASAASpfvifFKFLGISGLapLINAVILTAALSAANSSLYSGSRMLYSLARDGLAPKFLK-KVDKRGVPLRAILVSM 336

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 33286430   170 ISTLLMLVTSDMYT------LINYVGFINYLFYGVTVAGQIvlRWKKPDIPRPIKINLLFPIIYLLFWAFLLVFSL 239
Cdd:pfam00324 337 VISLLALLLASLNPaivfnfLLAISGLSGLIVWGLISLSHL--RFRKAFKYQGRSIDELPFKAPLGPLGVILGLAA 410
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
 40-209 9.56e-10

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 59.44  E-value: 9.56e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430    40 FAYGGWNFLNYVTEELVDPYKNLPRAIFISIpLVTFVYVFANVAYVTAMSPQELLASNA-VAVTFGEKLLGVMAWIMPIS 118
Cdd:TIGR00906 242 FAFIGFDAIATTGEEVKNPQRAIPIGIVTSL-LVCFVAYFLMSAALTLMMPYYLLDPDApFPVAFEYVGWDPAKYIVAVG 320

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430   119 VALSTFGGVNGSLFTSSRLFFAGAREGHLPSVLAMIHVKRCTPIPALLFTCISTLLMLVTSDMYTLINYVGFINYLFYGV 198
Cdd:TIGR00906 321 ALCGMSTSLLGGMFPLPRVIYAMARDGLLFKWLAQINSKTKTPINATVVSGAIAALMAFLFDLKALVDLLSIGTLLAYSL 400

                         170
                  ....*....|.
gi 33286430   199 TVAGQIVLRWK 209
Cdd:TIGR00906 401 VAACVLILRYQ 411
frlA PRK11357
amino acid permease;
39-261 6.15e-09

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 56.79  E-value: 6.15e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430   39 SFAYGGWNFLNYVTEELVDPYKNLPRAIFISIPLVTFVYVFANVAYVTAMSPQELLASN---AVAVTFGEKLLGVMAWIM 115
Cdd:PRK11357 205 SWSYTGMASICYMTGEIKNPGKTMPRALIGSCLLVLVLYTLLALVISGLMPFDKLANSEtpiSDALTWIPALGSTAGIFV 284

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430  116 PISVALSTFGGVNGSLFTSSRLFFAGAREGHLPSVLAMIHVKRCTPIPALLFTCISTLLMLVTSDMYTLINYVGFINYLF 195
Cdd:PRK11357 285 AITAMIVILGSLSSCVMYQPRLEYAMAKDNLFFKCFGHVHPKYNTPDVSIILQGALGIFFIFVSDLTSLLGYFTLVMCFK 364

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 33286430  196 YGVTVAGQIVLR--------WKKPdiPRPIKINLLFPIIYLLFWAFLlvfsLWSEPVVCGIGLAIMLTGVPVYF 261
Cdd:PRK11357 365 NTLTFGSIIWCRkrddykplWRTP--AFGLMTTLAIASSLILVASTF----VWAPIPGLICAVIVIATGLPAYA 432
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
31-262 2.71e-08

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 54.74  E-value: 2.71e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430  31 VALAFLQGSFAYGGwnflnyvTE-------ELVDPYKNLPRAIfISIPL-VTFVYVFAnVAYVTAMSP-QELLASNAVAV 101
Cdd:COG1113 208 VLAALQIVVFAFGG-------IElvgiaaaEAKDPEKTIPKAI-NSVIWrILLFYVGS-LFVILALVPwNQIGAGGSPFV 278

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430 102 TFGEKL-LGVMAWIMPISV---ALSTFggvNGSLFTSSRLFFAGAREGHLPSVLAMIHvKRCTPIPALLFTCISTLL--- 174
Cdd:COG1113 279 TVFSLLgIPAAAGIMNFVVltaALSSL---NSGLYSTSRMLYSLAERGDAPKFFGKLS-KRGVPVRAILLSAVVLLIgvv 354

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430 175 --MLVTSDMYTLI-NYVGFINYLFYGVTVAGQIVLR-WKKPDIPRPIKINL-LFP---IIYLLFWAFLLVFSLWSE---- 242
Cdd:COG1113 355 lnYLLPEKAFTFLlSISGFGALFVWLMILVSQLKFRrRLPREGAAALKFKMpGFPytsYLTLAFLAAVLVLMAFDPdtri 434

                       250       260
                ....*....|....*....|
gi 33286430 243 PVVCGIGLAIMLTGvpVYFL 262
Cdd:COG1113 435 ALIVGPVWLALLVV--GYFL 452
PRK11049 PRK11049
D-alanine/D-serine/glycine permease; Provisional
 40-236 9.26e-08

D-alanine/D-serine/glycine permease; Provisional


Pssm-ID: 236830  Cd Length: 469  Bit Score: 53.20  E-value: 9.26e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430   40 FAYGGWNFLNYVTEELVDPYKNLPRAI-FISIPLVTFvYVFANVAYVTAMSPQELLASNAVAVT-FGEKLLGVMAWIMPI 117
Cdd:PRK11049 222 FAFVGIELVGTTAAETKDPEKSLPRAInSIPIRIIMF-YVFALIVIMSVTPWSSVVPDKSPFVElFVLVGLPAAASVINF 300

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430  118 SVALSTFGGVNGSLFTSSRLFFAGAREGHLPSVLAMIHvKRCTPIPALLFTCI----STLLMLVTSDM---YTLINYVGF 190
Cdd:PRK11049 301 VVLTSAASSANSGVFSTSRMLFGLAQEGVAPKAFAKLS-KRAVPAKGLTFSCIcllgGVVLLYVNPSVigaFTLVTTVSA 379

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 33286430  191 INYLF-YGVTVAGQIVLRWKKPDIPRPIKINLLFPIIY----LLFWAFLLV 236
Cdd:PRK11049 380 ILFMFvWTIILCSYLVYRKQRPHLHEKSIYKMPLGKLMcwvcMAFFAFVLV 430
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
 31-177 1.03e-07

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 53.06  E-value: 1.03e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430    31 VALAFLQGSFAYGGWNFLNYVTEELVDPYKNLPRAIFISIPLVTFVYVFANVAY---VTAMSPQELLASNAVAV------ 101
Cdd:TIGR00913 199 VCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAKRTFWRILVFYILTLFLIgflVPYNDPRLLSSSSSSDSaaspfv 278

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430   102 ----TFGEKllgVMAWIMPISVALSTFGGVNGSLFTSSRLFFAGAREGHLPSVLAMIHvKRCTPIPALLFTCISTLLMLV 177
Cdd:TIGR00913 279 iaiqNHGIK---VLPHIFNAVILISVLSAANSSLYASSRTLYALAHQGLAPKIFAYVD-RRGVPYVAVIVSSLFGLLAFL 354
proY PRK10580
putative proline-specific permease; Provisional
 40-174 3.69e-05

putative proline-specific permease; Provisional


Pssm-ID: 182566 [Multi-domain]  Cd Length: 457  Bit Score: 45.20  E-value: 3.69e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430   40 FAYGGWNFLNYVTEELVDPYKNLPRAIFiSIPLVTFVYVFANVAYVTAMSPQELLASNA--VAVTFGEKLLGVMAWIMPI 117
Cdd:PRK10580 210 FAYGGIEIIGITAGEAKDPEKSIPRAIN-SVPMRILVFYVGTLFVIMSIYPWNQVGTNGspFVLTFQHMGITFAASILNF 288

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 33286430  118 SVALSTFGGVNGSLFTSSRLFFAGAREGHLPSVLAMIHvKRCTPIPALLFTCISTLL 174
Cdd:PRK10580 289 VVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSKTS-RRGIPWVTVLVMTTALLF 344
PRK10238 PRK10238
aromatic amino acid transporter AroP;
40-271 1.05e-04

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 43.79  E-value: 1.05e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430   40 FAYGGWNFLNYVTEELVDPYKNLPRAIFISIPLVTFVYVFANVAYVTAMSPQELLASNAVAV----TFGEKLLGVMAWIM 115
Cdd:PRK10238 211 FSFGGLELVGITAAEADNPEQSIPKATNQVIYRILIFYIGSLAVLLSLMPWTRVTADTSPFVlifhELGDTFVANALNIV 290

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430  116 PISVALSTFggvNGSLFTSSRLFFAGAREGHLPSVLAMIHvKRCTPIPALLFTCISTLLMLvtsdmytLINYVG------ 189
Cdd:PRK10238 291 VLTAALSVY---NSCVYCNSRMLFGLAQQGNAPKALASVD-KRGVPVNTILVSALVTALCV-------LINYLApesafg 359

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430  190 ----------FINYLFygVTVAGQIVLRWKKPDIPRPIKINLLFPI---IYLLFWAFLLVFSLWSEpvvcGIGLAIMLTG 256
Cdd:PRK10238 360 llmalvvsalVINWAM--ISLAHMKFRRAKQEQGVVTRFPALLYPLgnwICLLFMAAVLVIMLMTP----GMAISVYLIP 433

                        250
                 ....*....|....*
gi 33286430  257 VPVYFLGVYWQHKPK 271
Cdd:PRK10238 434 VWLIVLGIGYLFKEK 448
PRK10249 PRK10249
phenylalanine transporter; Provisional
 40-188 5.87e-04

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 41.51  E-value: 5.87e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430   40 FAYGGWNFLNYVTEELVDPYKNLPRAIFISIPLVTFVYVfANVAYVTAMSPQELLASNA--VAVTFGEKLLGVMAWIMPI 117
Cdd:PRK10249 220 FSFGGLELIGITAAEARDPEKSIPKAVNQVVYRILLFYI-GSLVVLLALYPWVEVKSNSspFVMIFHNLDSNVVASALNF 298

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 33286430  118 SVALSTFGGVNGSLFTSSRLFFAGAREGHLPSVLAMIHvKRCTPIPALLFTCISTLLMLvtsdmytLINYV 188
Cdd:PRK10249 299 VILVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLTRVS-RRGVPINSLMLSGAITSLVV-------LINYL 361
2A0304 TIGR00907
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
 17-175 8.23e-04

amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273331 [Multi-domain]  Cd Length: 482  Bit Score: 40.89  E-value: 8.23e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430    17 KNAFENFQ------EPDIGLVALAFLQGSFAYGGWNFLNYVTEELVDPYKNLPRAIFISIPL-VTFVYVFANVAYVTAMS 89
Cdd:TIGR00907 199 KFVFTNFNnstggwKPGGFAFLLGLLNPAWSMTGYDGTAHMAEEIENPEVVGPRAIIGAVAIgIVTGFCFNIVLFFSMGD 278

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430    90 PQELLASNA---VAVTFGEKL---LGVMAWIMPISVAlsTFGGVNGSLFTSSRLFFAGAREGHLP--SVLAMIHVKRCTP 161
Cdd:TIGR00907 279 IDSLISSTTgqpIAQIFYNALgnkAGAIFLLCLILVT--SFFCAITCMTANSRMIYAFSRDGGLPfsPLWSRVNPRTQVP 356

                         170
                  ....*....|....
gi 33286430   162 IPALLFTCISTLLM 175
Cdd:TIGR00907 357 LNAVWLSAVWIILI 370
PRK11021 PRK11021
putative transporter; Provisional
 53-177 1.96e-03

putative transporter; Provisional


Pssm-ID: 236823 [Multi-domain]  Cd Length: 410  Bit Score: 39.51  E-value: 1.96e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 33286430   53 EELVDPYKNLPRAIFISIPLVTFVYVFANVAYVTAMSPQELLASNAVAVTFGEKLLGVMA-WIMPISVALSTFGGVNGSL 131
Cdd:PRK11021 201 SEFKNPERDFPRALMIGLLLAGLVYWACTVVVLHFPAYGDKQAAAASLPGIFVQLFGGYAlWVICVIGYLACFASVNIYT 280

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 33286430  132 FTSSRLFFAGAREGHLPSVLAMIHVKRcTPIPALLFTCISTLLMLV 177
Cdd:PRK11021 281 QSFARLVWSQAREGRPPSYLARLSARG-VPVNALNAVLGCCAVSIL 325
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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