|
Name |
Accession |
Description |
Interval |
E-value |
| VLCAD |
cd01161 |
Very long chain acyl-CoA dehydrogenase; VLCAD is an acyl-CoA dehydrogenase (ACAD), which is ... |
42-449 |
0e+00 |
|
Very long chain acyl-CoA dehydrogenase; VLCAD is an acyl-CoA dehydrogenase (ACAD), which is found in the mitochondria of eukaryotes and in some bacteria. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. VLCAD acts as a homodimer.
Pssm-ID: 173850 [Multi-domain] Cd Length: 409 Bit Score: 718.87 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 42 SFAKELFLGHIQQKGVFPFPEVSQEELSE-INQFVGPLEKFFNEEVDSRKIDQEGKIPADTLAKLKSLGLFGIQVPEEYG 120
Cdd:cd01161 1 SFALNMFLGDIVTKQVFPYPSVLTEEQTEeLNMLVGPVEKFFEEVNDPAKNDQLEKIPRKTLTQLKELGLFGLQVPEEYG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 121 GLGLSNTMYARLGEIISMDASITVTLAAHQAIGLKGIILVGNEEQKAKYLPKLSSGEHIAAFCLTEPASGSDAASIQTRA 200
Cdd:cd01161 81 GLGLNNTQYARLAEIVGMDLGFSVTLGAHQSIGFKGILLFGTEAQKEKYLPKLASGEWIAAFALTEPSSGSDAASIRTTA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 201 TLSEDKKYFVLNGSKVWITNGGLANIFTVFAKTEVVDSDGSIKDKMTAFIVERDFGGITNGKPEDKLGIRGSNTCEVHFE 280
Cdd:cd01161 161 VLSEDGKHYVLNGSKIWITNGGIADIFTVFAKTEVKDATGSVKDKITAFIVERSFGGVTNGPPEKKMGIKGSNTAEVYFE 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 281 NTRVPVENVLGEVGGGFKVAMNILNSGRFSMGSAVAGMLKKLIEQTAEYACTRKQFNRNLSEFGLIQEKFALMAQKAYVM 360
Cdd:cd01161 241 DVKIPVENVLGEVGDGFKVAMNILNNGRFGMGAALIGTMKRCIEKAVDYANNRKQFGKKIHEFGLIQEKLANMAILQYAT 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 361 ESMAYLTSGMLDQPGFPDCSIEAAMVKVFSSEAAWQCVSEALQILGGSGYMKDYPYERMLRDARILLIFEGTNEILRLFI 440
Cdd:cd01161 321 ESMAYMTSGNMDRGLKAEYQIEAAISKVFASEAAWLVVDEAIQIHGGMGFMREYGVERVLRDLRIFRIFEGTNEILRLFI 400
|
....*....
gi 197313734 441 ALTGLQHAG 449
Cdd:cd01161 401 ALTGLQHAG 409
|
|
| CaiA |
COG1960 |
Acyl-CoA dehydrogenase related to the alkylation response protein AidB [Lipid transport and ... |
70-441 |
4.62e-146 |
|
Acyl-CoA dehydrogenase related to the alkylation response protein AidB [Lipid transport and metabolism]; Acyl-CoA dehydrogenase related to the alkylation response protein AidB is part of the Pathway/BioSystem: Fatty acid biosynthesis
Pssm-ID: 441563 [Multi-domain] Cd Length: 381 Bit Score: 428.10 E-value: 4.62e-146
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 70 EINQFVGPLEKFFNEEVD--SRKIDQEGKIPADTLAKLKSLGLFGIQVPEEYGGLGLSNTMYARLGEIISM-DASITVTL 146
Cdd:COG1960 8 EQRALRDEVREFAEEEIApeAREWDREGEFPRELWRKLAELGLLGLTIPEEYGGLGLSLVELALVLEELARaDASLALPV 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 147 AAHqAIGLKGIILVGNEEQKAKYLPKLSSGEHIAAFCLTEPASGSDAASIQTRATLSEDKkyFVLNGSKVWITNGGLANI 226
Cdd:COG1960 88 GVH-NGAAEALLRFGTEEQKERYLPRLASGEWIGAFALTEPGAGSDAAALRTTAVRDGDG--YVLNGQKTFITNAPVADV 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 227 FTVFAKTEvvDSDGSikDKMTAFIVERDFGGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFKVAMNILNS 306
Cdd:COG1960 165 ILVLARTD--PAAGH--RGISLFLVPKDTPGVTVGRIEDKMGLRGSDTGELFFDDVRVPAENLLGEEGKGFKIAMSTLNA 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 307 GRFSMGSAVAGMLKKLIEQTAEYACTRKQFNRNLSEFGLIQEKFALMAQKAYVMESMAYLTSGMLDQPGfpDCSIEAAMV 386
Cdd:COG1960 241 GRLGLAAQALGIAEAALELAVAYAREREQFGRPIADFQAVQHRLADMAAELEAARALVYRAAWLLDAGE--DAALEAAMA 318
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 197313734 387 KVFSSEAAWQCVSEALQILGGSGYMKDYPYERMLRDARILLIFEGTNEILRLFIA 441
Cdd:COG1960 319 KLFATEAALEVADEALQIHGGYGYTREYPLERLYRDARILTIYEGTNEIQRLIIA 373
|
|
| SCAD_SBCAD |
cd01158 |
Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA ... |
66-441 |
1.08e-132 |
|
Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases; Short chain acyl-CoA dehydrogenase (SCAD). SCAD is a mitochondrial beta-oxidation enzyme. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of SCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. This subgroup also contains the eukaryotic short/branched chain acyl-CoA dehydrogenase(SBCAD), the bacterial butyryl-CoA dehydorgenase(BCAD) and 2-methylbutyryl-CoA dehydrogenase, which is involved in isoleucine catabolism. These enzymes are homotetramers.
Pssm-ID: 173847 [Multi-domain] Cd Length: 373 Bit Score: 393.56 E-value: 1.08e-132
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 66 EELSEINQFVgplEKFFNEEVD--SRKIDQEGKIPADTLAKLKSLGLFGIQVPEEYGGLGLSNTMYAR-LGEIISMDASI 142
Cdd:cd01158 1 EEHQMIRKTV---RDFAEKEIAplAAEMDEKGEFPREVIKEMAELGLMGIPIPEEYGGAGLDFLAYAIaIEELAKVDASV 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 143 TVTLAAHQAIGLKGIILVGNEEQKAKYLPKLSSGEHIAAFCLTEPASGSDAASIQTRATLSEDkkYFVLNGSKVWITNGG 222
Cdd:cd01158 78 AVIVSVHNSLGANPIIKFGTEEQKKKYLPPLATGEKIGAFALSEPGAGSDAAALKTTAKKDGD--DYVLNGSKMWITNGG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 223 LANIFTVFAKTevvdsDGSIKDK-MTAFIVERDFGGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFKVAM 301
Cdd:cd01158 156 EADFYIVFAVT-----DPSKGYRgITAFIVERDTPGLSVGKKEDKLGIRGSSTTELIFEDVRVPKENILGEEGEGFKIAM 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 302 NILNSGRFSMGSAVAGMLKKLIEQTAEYACTRKQFNRNLSEFGLIQEKFALMAQKayvMESMAYLT--SGMLDQPGFPdC 379
Cdd:cd01158 231 QTLDGGRIGIAAQALGIAQAALDAAVDYAKERKQFGKPIADFQGIQFKLADMATE---IEAARLLTykAARLKDNGEP-F 306
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 197313734 380 SIEAAMVKVFSSEAAWQCVSEALQILGGSGYMKDYPYERMLRDARILLIFEGTNEILRLFIA 441
Cdd:cd01158 307 IKEAAMAKLFASEVAMRVTTDAVQIFGGYGYTKDYPVERYYRDAKITEIYEGTSEIQRLVIA 368
|
|
| ACAD |
cd00567 |
Acyl-CoA dehydrogenase; Both mitochondrial acyl-CoA dehydrogenases (ACAD) and peroxisomal ... |
152-441 |
3.74e-115 |
|
Acyl-CoA dehydrogenase; Both mitochondrial acyl-CoA dehydrogenases (ACAD) and peroxisomal acyl-CoA oxidases (AXO) catalyze the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. In contrast, AXO catalyzes a different oxidative half-reaction, in which the reduced FAD is reoxidized by molecular oxygen. The ACAD family includes the eukaryotic beta-oxidation enzymes, short (SCAD), medium (MCAD), long (LCAD) and very-long (VLCAD) chain acyl-CoA dehydrogenases. These enzymes all share high sequence similarity, but differ in their substrate specificities. The ACAD family also includes amino acid catabolism enzymes such as Isovaleryl-CoA dehydrogenase (IVD), short/branched chain acyl-CoA dehydrogenases(SBCAD), Isobutyryl-CoA dehydrogenase (IBDH), glutaryl-CoA deydrogenase (GCD) and Crotonobetainyl-CoA dehydrogenase. The mitochondrial ACAD's are generally homotetramers, except for VLCAD, which is a homodimer. Related enzymes include the SOS adaptive reponse proten aidB, Naphthocyclinone hydroxylase (NcnH), and and Dibenzothiophene (DBT) desulfurization enzyme C (DszC)
Pssm-ID: 173838 [Multi-domain] Cd Length: 327 Bit Score: 346.96 E-value: 3.74e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 152 IGLKGIILVGNEEQKAKYLPKLSSGEHIAAFCLTEPASGSDAASIQTRATLSEDKkyFVLNGSKVWITNGGLANIFTVFA 231
Cdd:cd00567 43 LGAALLLAYGTEEQKERYLPPLASGEAIAAFALTEPGAGSDLAGIRTTARKDGDG--YVLNGRKIFISNGGDADLFIVLA 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 232 KTevvDSDGSIKDKMTAFIVERDFGGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFKVAMNILNSGRFSM 311
Cdd:cd00567 121 RT---DEEGPGHRGISAFLVPADTPGVTVGRIWDKMGMRGSGTGELVFDDVRVPEDNLLGEEGGGFELAMKGLNVGRLLL 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 312 GSAVAGMLKKLIEQTAEYACTRKQFNRNLSEFGLIQEKFALMAQKAYVMESMAYLTSGMLDQpGFPDCSIEAAMVKVFSS 391
Cdd:cd00567 198 AAVALGAARAALDEAVEYAKQRKQFGKPLAEFQAVQFKLADMAAELEAARLLLYRAAWLLDQ-GPDEARLEAAMAKLFAT 276
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 197313734 392 EAAWQCVSEALQILGGSGYMKDYPYERMLRDARILLIFEGTNEILRLFIA 441
Cdd:cd00567 277 EAAREVADLAMQIHGGRGYSREYPVERYLRDARAARIAEGTAEIQRLIIA 326
|
|
| IVD |
cd01156 |
Isovaleryl-CoA dehydrogenase; Isovaleryl-CoA dehydrogenase (IVD) is an is an acyl-CoA ... |
70-441 |
2.19e-107 |
|
Isovaleryl-CoA dehydrogenase; Isovaleryl-CoA dehydrogenase (IVD) is an is an acyl-CoA dehydrogenase, which catalyzes the third step in leucine catabolism, the conversion of isovaleryl-CoA (3-methylbutyryl-CoA) into 3-methylcrotonyl-CoA. IVD is a homotetramer and has the greatest affinity for small branched chain substrates.
Pssm-ID: 173845 [Multi-domain] Cd Length: 376 Bit Score: 328.60 E-value: 2.19e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 70 EINQFVGPLEKFFNEEVDSR--KIDQEGKIPADTLAKLKSLGLFGIQVPEEYGGLGLSNTMYARLGEIIS-MDASITVTL 146
Cdd:cd01156 5 EIEMLRQSVREFAQKEIAPLaaKIDRDNEFPRDLWRKMGKLGLLGITAPEEYGGSGMGYLAHVIIMEEISrASGSVALSY 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 147 AAHQAIGLKGIILVGNEEQKAKYLPKLSSGEHIAAFCLTEPASGSDAASIQTRATlsEDKKYFVLNGSKVWITNGGLANI 226
Cdd:cd01156 85 GAHSNLCINQIYRNGSAAQKEKYLPKLISGEHIGALAMSEPNAGSDVVSMKLRAE--KKGDRYVLNGSKMWITNGPDADT 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 227 FTVFAKTEV-VDSDGsikdkMTAFIVERDFGGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFKVAMNILN 305
Cdd:cd01156 163 LVVYAKTDPsAGAHG-----ITAFIVEKGMPGFSRAQKLDKLGMRGSNTCELVFEDCEVPEENILGGENKGVYVLMSGLD 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 306 SGRFSMGSAVAGMLKKLIEQTAEYACTRKQFNRNLSEFGLIQEKFA-----LMAQKAYVMESMAYLTSGMLDqpgfpdcS 380
Cdd:cd01156 238 YERLVLAGGPIGIMQAALDVAIPYAHQRKQFGQPIGEFQLVQGKLAdmytrLNASRSYLYTVAKACDRGNMD-------P 310
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 197313734 381 IEAAMVKVFSSEAAWQCVSEALQILGGSGYMKDYPYERMLRDARILLIFEGTNEILRLFIA 441
Cdd:cd01156 311 KDAAGVILYAAEKATQVALDAIQILGGNGYINDYPTGRLLRDAKLYEIGAGTSEIRRMVIG 371
|
|
| IBD |
cd01162 |
Isobutyryl-CoA dehydrogenase; Isobutyryl-CoA dehydrogenase (IBD) catalyzes the alpha, beta- ... |
92-441 |
4.74e-87 |
|
Isobutyryl-CoA dehydrogenase; Isobutyryl-CoA dehydrogenase (IBD) catalyzes the alpha, beta- dehydrogenation of short branched chain acyl-CoA intermediates in valine catabolism. It is predicted to be a homotetramer.
Pssm-ID: 173851 [Multi-domain] Cd Length: 375 Bit Score: 275.86 E-value: 4.74e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 92 DQEGKIPADTLAKLKSLGLFGIQVPEEYGGLGLSNTMYARLGEIISM-DASITVTLAAHQAIGLKgIILVGNEEQKAKYL 170
Cdd:cd01162 28 DQKKHFPVDVLRKAAELGFGGIYIRDDVGGSGLSRLDASIIFEALSTgCVSTAAYISIHNMCAWM-IDSFGNDEQRERFL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 171 PKLSSGEHIAAFCLTEPASGSDAASIQTRATLSEDkkYFVLNGSKVWITNGGLANIFTVFAKTevvdsDGSIKDKMTAFI 250
Cdd:cd01162 107 PDLCTMEKLASYCLTEPGSGSDAAALRTRAVREGD--HYVLNGSKAFISGAGDSDVYVVMART-----GGEGPKGISCFV 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 251 VERDFGGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFKVAMNILNSGRFSMGSAVAGMLKKLIEQTAEYA 330
Cdd:cd01162 180 VEKGTPGLSFGANEKKMGWNAQPTRAVIFEDCRVPVENRLGGEGQGFGIAMAGLNGGRLNIASCSLGAAQAALDLARAYL 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 331 CTRKQFNRNLSEFGLIQEKFALMAQKAYVMESMAYLTSGMLDQpGFPDCSIEAAMVKVFSSEAAWQCVSEALQILGGSGY 410
Cdd:cd01162 260 EERKQFGKPLADFQALQFKLADMATELVASRLMVRRAASALDR-GDPDAVKLCAMAKRFATDECFDVANQALQLHGGYGY 338
|
330 340 350
....*....|....*....|....*....|.
gi 197313734 411 MKDYPYERMLRDARILLIFEGTNEILRLFIA 441
Cdd:cd01162 339 LKDYPVEQYVRDLRVHQILEGTNEIMRLIIA 369
|
|
| LCAD |
cd01160 |
Long chain acyl-CoA dehydrogenase; LCAD is an acyl-CoA dehydrogenases (ACAD), which is found ... |
80-441 |
8.06e-83 |
|
Long chain acyl-CoA dehydrogenase; LCAD is an acyl-CoA dehydrogenases (ACAD), which is found in the mitochondria of eukaryotes and in some prokaryotes. It catalyzes the alpha, beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of LCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. LCAD acts as a homodimer.
Pssm-ID: 173849 [Multi-domain] Cd Length: 372 Bit Score: 264.75 E-value: 8.06e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 80 KFFNEEVD--SRKIDQEGKIPADTLAKLKSLGLFGIQVPEEYGGLGLSNTMYARLGEIISMDASITVTLAAHQAIGLKGI 157
Cdd:cd01160 12 RFFAKEVApfHHEWEKAGEVPREVWRKAGEQGLLGVGFPEEYGGIGGDLLSAAVLWEELARAGGSGPGLSLHTDIVSPYI 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 158 ILVGNEEQKAKYLPKLSSGEHIAAFCLTEPASGSDAASIQTRATLseDKKYFVLNGSKVWITNGGLANIFTVFAKTevvD 237
Cdd:cd01160 92 TRAGSPEQKERVLPQMVAGKKIGAIAMTEPGAGSDLQGIRTTARK--DGDHYVLNGSKTFITNGMLADVVIVVART---G 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 238 SDGSIKDKMTAFIVERDFGGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFKVAMNILNSGRFSMGSAVAG 317
Cdd:cd01160 167 GEARGAGGISLFLVERGTPGFSRGRKLKKMGWKAQDTAELFFDDCRVPAENLLGEENKGFYYLMQNLPQERLLIAAGALA 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 318 MLKKLIEQTAEYACTRKQFNRNLSEFGLIQEKFALMAQKAYVMESMAYLTSGMLDQPGFPdcSIEAAMVKVFSSEAAWQC 397
Cdd:cd01160 247 AAEFMLEETRNYVKQRKAFGKTLAQLQVVRHKIAELATKVAVTRAFLDNCAWRHEQGRLD--VAEASMAKYWATELQNRV 324
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 197313734 398 VSEALQILGGSGYMKDYPYERMLRDARILLIFEGTNEILRLFIA 441
Cdd:cd01160 325 AYECVQLHGGWGYMREYPIARAYRDARVQPIYGGTTEIMKELIS 368
|
|
| PLN02519 |
PLN02519 |
isovaleryl-CoA dehydrogenase |
73-440 |
2.86e-80 |
|
isovaleryl-CoA dehydrogenase
Pssm-ID: 215284 [Multi-domain] Cd Length: 404 Bit Score: 259.42 E-value: 2.86e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 73 QFVGPLEKFFNEEV--DSRKIDQEGKIPAD-TLAKLK-SLGLFGIQVPEEYGGLGLSNTMYA-RLGEIISMDASITVTLA 147
Cdd:PLN02519 32 QFKESVQQFAQENIapHAAAIDATNSFPKDvNLWKLMgDFNLHGITAPEEYGGLGLGYLYHCiAMEEISRASGSVGLSYG 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 148 AHQAIGLKGIILVGNEEQKAKYLPKLSSGEHIAAFCLTEPASGSDAASIQTRATLSEdkKYFVLNGSKVWITNGGLANIF 227
Cdd:PLN02519 112 AHSNLCINQLVRNGTPAQKEKYLPKLISGEHVGALAMSEPNSGSDVVSMKCKAERVD--GGYVLNGNKMWCTNGPVAQTL 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 228 TVFAKTEVVDSDGSIkdkmTAFIVERDFGGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFKVAMNILNSG 307
Cdd:PLN02519 190 VVYAKTDVAAGSKGI----TAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPEENVLGQEGKGVYVMMSGLDLE 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 308 RFSMGSAVAGMLKKLIEQTAEYACTRKQFNRNLSEFGLIQEKFA-----LMAQKAYVMESMAYLTSGMLDQpgfPDCsie 382
Cdd:PLN02519 266 RLVLAAGPLGLMQACLDVVLPYVRQREQFGRPIGEFQFIQGKLAdmytsLQSSRSYVYSVARDCDNGKVDR---KDC--- 339
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 197313734 383 aAMVKVFSSEAAWQCVSEALQILGGSGYMKDYPYERMLRDARILLIFEGTNEILRLFI 440
Cdd:PLN02519 340 -AGVILCAAERATQVALQAIQCLGGNGYINEYPTGRLLRDAKLYEIGAGTSEIRRMLI 396
|
|
| MCAD |
cd01157 |
Medium chain acyl-CoA dehydrogenase; MCADs are mitochondrial beta-oxidation enzymes, which ... |
80-447 |
9.81e-77 |
|
Medium chain acyl-CoA dehydrogenase; MCADs are mitochondrial beta-oxidation enzymes, which catalyze the alpha,beta dehydrogenation of the corresponding medium chain acyl-CoA by FAD, which becomes reduced. The reduced form of MCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. MCAD is a homotetramer.
Pssm-ID: 173846 [Multi-domain] Cd Length: 378 Bit Score: 249.04 E-value: 9.81e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 80 KFFNEEV--DSRKIDQEGKIPADTLAKLKSLGLFGIQVPEEYGGLGLSNTMYARLGEIISMDASITVTLAAHQAIGLKGI 157
Cdd:cd01157 14 KFAREEIipVAAEYDKSGEYPWPLIKRAWELGLMNTHIPEDCGGLGLGTFDTCLITEELAYGCTGVQTAIEANSLGQMPV 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 158 ILVGNEEQKAKYLPKLSSGEHIAAFCLTEPASGSDAASIQTRATLSEDKkyFVLNGSKVWITNGGLANIFTVFAKTEVvD 237
Cdd:cd01157 94 IISGNDEQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDE--YIINGQKMWITNGGKANWYFLLARSDP-D 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 238 SDGSIKDKMTAFIVERDFGGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFKVAMNILNSGRFSMGSAVAG 317
Cdd:cd01157 171 PKCPASKAFTGFIVEADTPGIQPGRKELNMGQRCSDTRGITFEDVRVPKENVLIGEGAGFKIAMGAFDKTRPPVAAGAVG 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 318 MLKKLIEQTAEYACTRKQFNRNLSEFGLIQEKFALMAQKAYVMESMAYLTSGMLDQPgfPDCSIEAAMVKVFSSEAAWQC 397
Cdd:cd01157 251 LAQRALDEATKYALERKTFGKLIAEHQAVSFMLADMAMKVELARLAYQRAAWEVDSG--RRNTYYASIAKAFAADIANQL 328
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 197313734 398 VSEALQILGGSGYMKDYPYERMLRDARILLIFEGTNEILRLFIALTGLQH 447
Cdd:cd01157 329 ATDAVQIFGGNGFNSEYPVEKLMRDAKIYQIYEGTSQIQRLIISREHLGK 378
|
|
| GCD |
cd01151 |
Glutaryl-CoA dehydrogenase; Glutaryl-CoA dehydrogenase (GCD). GCD is an acyl-CoA dehydrogenase, ... |
79-446 |
5.93e-71 |
|
Glutaryl-CoA dehydrogenase; Glutaryl-CoA dehydrogenase (GCD). GCD is an acyl-CoA dehydrogenase, which catalyzes the oxidative decarboxylation of glutaryl-CoA to crotonyl-CoA and carbon dioxide in the catabolism of lysine, hydroxylysine, and tryptophan. It uses electron transfer flavoprotein (ETF) as an electron acceptor. GCD is a homotetramer. GCD deficiency leads to a severe neurological disorder in humans.
Pssm-ID: 173840 [Multi-domain] Cd Length: 386 Bit Score: 234.17 E-value: 5.93e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 79 EKFFNEEVDSRKID--QEGKIPADTLAKLKSLGLFGIQvPEEYGGLGLSNTMYARLG-EIISMDASITVTLAAHQAIGLK 155
Cdd:cd01151 25 REFCQEELAPRVLEayREEKFDRKIIEEMGELGLLGAT-IKGYGCAGLSSVAYGLIArEVERVDSGYRSFMSVQSSLVML 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 156 GIILVGNEEQKAKYLPKLSSGEHIAAFCLTEPASGSDAASIQTRATlsEDKKYFVLNGSKVWITNGGLANIFTVFAKTev 235
Cdd:cd01151 104 PIYDFGSEEQKQKYLPKLASGELIGCFGLTEPNHGSDPGGMETRAR--KDGGGYKLNGSKTWITNSPIADVFVVWARN-- 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 236 vDSDGSIKdkmtAFIVERDFGGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEV---GGGFKVamniLNSGRFSMG 312
Cdd:cd01151 180 -DETGKIR----GFILERGMKGLSAPKIQGKFSLRASITGEIVMDNVFVPEENLLPGAeglRGPFKC----LNNARYGIA 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 313 SAVAGMLKKLIEQTAEYACTRKQFNRNLSEFGLIQEKFALMAQKAYVMESMAYLTSGMLDQPGF-PDcsiEAAMVKVFSS 391
Cdd:cd01151 251 WGALGAAEDCYHTARQYVLDRKQFGRPLAAFQLVQKKLADMLTEIALGLLACLRVGRLKDQGKAtPE---QISLLKRNNC 327
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 197313734 392 EAAWQCVSEALQILGGSGYMKDYPYERMLRDARILLIFEGTNEILRLFI--ALTGLQ 446
Cdd:cd01151 328 GKALEIARTAREMLGGNGISDEYHIIRHMVNLESVNTYEGTHDIHALILgrAITGIQ 384
|
|
| PTZ00461 |
PTZ00461 |
isovaleryl-CoA dehydrogenase; Provisional |
78-460 |
2.27e-64 |
|
isovaleryl-CoA dehydrogenase; Provisional
Pssm-ID: 185640 [Multi-domain] Cd Length: 410 Bit Score: 217.50 E-value: 2.27e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 78 LEKFFNEEVD--SRKIDQEGKIPADTLAKLKSLGLFGIQVPEEYGGLGLSNTMYARLG-EIISMDASITVTLAAHQAIGL 154
Cdd:PTZ00461 48 VAKFSREVVDkhAREDDINMHFNRDLFKQLGDLGVMGVTVPEADGGAGMDAVAAVIIHhELSKYDPGFCLAYLAHSMLFV 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 155 KGIILVGNEEQKAKYLPKLSSGEHIAAFCLTEPASGSDAASIQTRATLSEDKKYfVLNGSKVWITNGGLANIFTVFAKTe 234
Cdd:PTZ00461 128 NNFYYSASPAQRARWLPKVLTGEHVGAMGMSEPGAGTDVLGMRTTAKKDSNGNY-VLNGSKIWITNGTVADVFLIYAKV- 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 235 vvdsDGsikdKMTAFIVERDFGGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFKVAMNILNSGRFSMGSA 314
Cdd:PTZ00461 206 ----DG----KITAFVVERGTKGFTQGPKIDKCGMRASHMCQLFFEDVVVPAENLLGEEGKGMVGMMRNLELERVTLAAM 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 315 VAGMLKKLIEQTAEYACTRKQFNRNLSEFGLIQEKFALMAQKAYVMESMAYLTSGMLdQPGFPDcSIEAAMVKVFSSEAA 394
Cdd:PTZ00461 278 AVGIAERSVELMTSYASERKAFGKPISNFGQIQRYIAEGYADTEAAKALVYSVSHNV-HPGNKN-RLGSDAAKLFATPIA 355
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 197313734 395 WQCVSEALQILGGSGYMKDYPYERMLRDARILLIFEGTNEilrlfialtglQHAGRILTSRIKELK 460
Cdd:PTZ00461 356 KKVADSAIQVMGGMGYSRDMPVERLWRDAKLLEIGGGTIE-----------AHHKNITKDLLKGLK 410
|
|
| ACAD_fadE5 |
cd01153 |
Putative acyl-CoA dehydrogenases similar to fadE5; Putative acyl-CoA dehydrogenase (ACAD). ... |
109-435 |
4.78e-60 |
|
Putative acyl-CoA dehydrogenases similar to fadE5; Putative acyl-CoA dehydrogenase (ACAD). Mitochondrial acyl-CoA dehydrogenases (ACAD) catalyze the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. The mitochondrial ACD's are generally homotetramers and have an active site glutamate at a conserved position.
Pssm-ID: 173842 [Multi-domain] Cd Length: 407 Bit Score: 206.09 E-value: 4.78e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 109 GLFGIQVPEEYGGLGLSNTMYARLGEIIS------MDASITVTLAAHqaiglkgIILVGNEEQKAKYLPKLSSGEHIAAF 182
Cdd:cd01153 49 GWMALGVPEEYGGQGLPITVYSALAEIFSrgdaplMYASGTQGAAAT-------LLAHGTEAQREKWIPRLAEGEWTGTM 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 183 CLTEPASGSDAASIQTRATLSEDKKYFvLNGSKVWITNG---GLANIF-TVFAKTEVVDSDGSikdKMTAFIV-ERDFGG 257
Cdd:cd01153 122 CLTEPDAGSDLGALRTKAVYQADGSWR-INGVKRFISAGehdMSENIVhLVLARSEGAPPGVK---GLSLFLVpKFLDDG 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 258 ITNG----KPEDKLGIRGSNTCEVHFENTRVPVenvLGEVGGGFKVAMNILNSGRFSMGSAVAGMLKKLIEQTAEYACTR 333
Cdd:cd01153 198 ERNGvtvaRIEEKMGLHGSPTCELVFDNAKGEL---IGEEGMGLAQMFAMMNGARLGVGTQGTGLAEAAYLNALAYAKER 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 334 KQFNRNLSEFGLIQE------KFALMAQKAYVMES----MAYLTSGMLDQPGFPDCSIEAA----------MVKVFSSEA 393
Cdd:cd01153 275 KQGGDLIKAAPAVTIihhpdvRRSLMTQKAYAEGSraldLYTATVQDLAERKATEGEDRKAlsaladlltpVVKGFGSEA 354
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 197313734 394 AWQCVSEALQILGGSGYMKDYPYERMLRDARILLIFEGTNEI 435
Cdd:cd01153 355 ALEAVSDAIQVHGGSGYTREYPIEQYYRDARITTIYEGTTGI 396
|
|
| PRK12341 |
PRK12341 |
acyl-CoA dehydrogenase; |
78-436 |
6.70e-50 |
|
acyl-CoA dehydrogenase;
Pssm-ID: 183454 [Multi-domain] Cd Length: 381 Bit Score: 177.61 E-value: 6.70e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 78 LEKFFNEEvDSRKIDQEGKIP---ADTLAKlKSLGLFGIqvPEEYGGLGLSN-TMYARLGEIISMDASITVTlaaHQAIG 153
Cdd:PRK12341 20 ITRNFPEE-YFRTCDENGTYPrefMRALAD-NGISMLGV--PEEFGGTPADYvTQMLVLEEVSKCGAPAFLI---TNGQC 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 154 LKGIILVGNEEQKAK-YLPKLSSGEhiAAFCL--TEPASGSDAASIQTRATLSEDKKYfvLNGSKVWITNGGLANIFTVF 230
Cdd:PRK12341 93 IHSMRRFGSAEQLRKtAESTLETGD--PAYALalTEPGAGSDNNSATTTYTRKNGKVY--LNGQKTFITGAKEYPYMLVL 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 231 AKtevvDSDGSIKDK-MTAFIVERDFGGITNgKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFKVAMNILNSGRF 309
Cdd:PRK12341 169 AR----DPQPKDPKKaFTLWWVDSSKPGIKI-NPLHKIGWHMLSTCEVYLDNVEVEESDLVGEEGMGFLNVMYNFEMERL 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 310 SMGSAVAGMLKKLIEQTAEYACTRKQFNRNLSEFGLIQEKFALMAQKAYVMESMAYLTSGMLDQpGFPdCSIEAAMVKVF 389
Cdd:PRK12341 244 INAARSLGFAECAFEDAARYANQRIQFGKPIGHNQLIQEKLTLMAIKIENMRNMVYKVAWQADN-GQS-LRTSAALAKLY 321
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 197313734 390 SSEAAWQCVSEALQILGGSGYMKDYPYERMLRDARILLIFEGTNEIL 436
Cdd:PRK12341 322 CARTAMEVIDDAIQIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIM 368
|
|
| ACAD_fadE6_17_26 |
cd01152 |
Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26; Putative acyl-CoA ... |
99-446 |
1.08e-48 |
|
Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26; Putative acyl-CoA dehydrogenases (ACAD). Mitochondrial acyl-CoA dehydrogenases (ACAD) catalyze the alpha, beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. The mitochondrial ACD's are generally homotetramers and have an active site glutamate at a conserved position.
Pssm-ID: 173841 [Multi-domain] Cd Length: 380 Bit Score: 174.46 E-value: 1.08e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 99 ADTLAKLKSLGLFGIQVPEEYGGLGLS-------NTMYARLGEIISMdASITVTLAAHQaiglkgIILVGNEEQKAKYLP 171
Cdd:cd01152 38 RRWQRALAAAGWAAPGWPKEYGGRGASlmeqlifREEMAAAGAPVPF-NQIGIDLAGPT------ILAYGTDEQKRRFLP 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 172 KLSSGEHIaaFCL--TEPASGSDAASIQTRATLSEDKkyFVLNGSKVWITNGGLANIFTVFAKTevvDSDGSIKDKMTAF 249
Cdd:cd01152 111 PILSGEEI--WCQgfSEPGAGSDLAGLRTRAVRDGDD--WVVNGQKIWTSGAHYADWAWLLVRT---DPEAPKHRGISIL 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 250 IVERDFGGIT-------NGKPEdklgirgsnTCEVHFENTRVPVENVLGEVGGGFKVAMNILNSGRFSMGSAVAgmlkKL 322
Cdd:cd01152 184 LVDMDSPGVTvrpirsiNGGEF---------FNEVFLDDVRVPDANRVGEVNDGWKVAMTTLNFERVSIGGSAA----TF 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 323 IEQTAEYACTRKQFNRNLSEFGLIQEKFALMAQKAYVMESMAYLTSGMLDQPGFPDcsIEAAMVKVFSSEAAwQCVSE-A 401
Cdd:cd01152 251 FELLLARLLLLTRDGRPLIDDPLVRQRLARLEAEAEALRLLVFRLASALAAGKPPG--AEASIAKLFGSELA-QELAElA 327
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 197313734 402 LQILGGSGYMKDYP--------YERMLRDARILLIFEGTNEILRLFIALTGLQ 446
Cdd:cd01152 328 LELLGTAALLRDPApgaelagrWEADYLRSRATTIYGGTSEIQRNIIAERLLG 380
|
|
| PRK03354 |
PRK03354 |
crotonobetainyl-CoA dehydrogenase; Validated |
79-438 |
3.30e-48 |
|
crotonobetainyl-CoA dehydrogenase; Validated
Pssm-ID: 179566 [Multi-domain] Cd Length: 380 Bit Score: 173.09 E-value: 3.30e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 79 EKFFNEevdsrkIDQEGKIPADTLAKLKSLGLFGIQVPEEYGGLGLSNTMYARLGEIISMDASITVTLaaHQ-AIGLKGI 157
Cdd:PRK03354 26 EAYFAE------CDRDSVYPERFVKALADMGIDSLLIPEEHGGLDAGFVTLAAVWMELGRLGAPTYVL--YQlPGGFNTF 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 158 ILVGNEEQKAKYLPKLSSGEHIAAFCLTEPASGSDAASIQTRATLSEDKKYfvLNGSKVWITNGGLANIFTVFAKtevvD 237
Cdd:PRK03354 98 LREGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKVY--LNGSKCFITSSAYTPYIVVMAR----D 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 238 SDGSIKDKMTAFIVERDFGGITNGKPEdKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFKVAMNILNSGRFSMGSAVAG 317
Cdd:PRK03354 172 GASPDKPVYTEWFVDMSKPGIKVTKLE-KLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYG 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 318 MLKKLIEQTAEYACTRKQFNRNLSEFGLIQEKFALMAQKAYVMESMAYLTSGMLDQPGFPdcSIEAAMVKVFSSEAAWQC 397
Cdd:PRK03354 251 TAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTIT--SGDAAMCKYFCANAAFEV 328
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 197313734 398 VSEALQILGGSGYMKDYPYERMLRDARILLIFEGTNEILRL 438
Cdd:PRK03354 329 VDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQIL 369
|
|
| ACAD_FadE2 |
cd01155 |
Acyl-CoA dehydrogenases similar to fadE2; FadE2-like Acyl-CoA dehydrogenase (ACAD). Acyl-CoA ... |
71-446 |
3.43e-45 |
|
Acyl-CoA dehydrogenases similar to fadE2; FadE2-like Acyl-CoA dehydrogenase (ACAD). Acyl-CoA dehydrogenases (ACAD) catalyze the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACAD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. ACAD's are generally homotetramers and have an active site glutamate at a conserved position.
Pssm-ID: 173844 [Multi-domain] Cd Length: 394 Bit Score: 165.26 E-value: 3.43e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 71 INQFVGPLEKFFNEEV--DSRKIDQEGKIPADTLAKLKSLGLFGIQVPEEYGGLGLSNTMYARLGEII--SMDASITVTL 146
Cdd:cd01155 14 MEEHVYPAEQEFLEYYaeGGDRWWTPPPIIEKLKAKAKAEGLWNLFLPEVSGLSGLTNLEYAYLAEETgrSFFAPEVFNC 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 147 AAHQAIGLKGIILVGNEEQKAKYLPKLSSGEHIAAFCLTEPA-SGSDAASIQTRATlsEDKKYFVLNGSKVWITNGG--L 223
Cdd:cd01155 94 QAPDTGNMEVLHRYGSEEQKKQWLEPLLDGKIRSAFAMTEPDvASSDATNIECSIE--RDGDDYVINGRKWWSSGAGdpR 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 224 ANIFTVFAKTevvDSDGSIKDKMTAFI-VERDFGGITNGKPedkLGIRGSNT-----CEVHFENTRVPVENVLGEVGGGF 297
Cdd:cd01155 172 CKIAIVMGRT---DPDGAPRHRQQSMIlVPMDTPGVTIIRP---LSVFGYDDaphghAEITFDNVRVPASNLILGEGRGF 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 298 KVAMNILNSGRFSMGSAVAGMLKKLIEQTAEYACTRKQFNRNLSEFGLIQEKFAlmaqKAYVMESMAYL----TSGMLDQ 373
Cdd:cd01155 246 EIAQGRLGPGRIHHCMRLIGAAERALELMCQRAVSREAFGKKLAQHGVVAHWIA----KSRIEIEQARLlvlkAAHMIDT 321
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 197313734 374 PGFPDCSIEAAMVKVFSSEAAWQCVSEALQILGGSGYMKDYPYERMLRDARILLIFEGTNEILRLFIALTGLQ 446
Cdd:cd01155 322 VGNKAARKEIAMIKVAAPRMALKIIDRAIQVHGAAGVSQDTPLANMYAWARTLRIADGPDEVHLRSIARMELK 394
|
|
| Acyl-CoA_dh_1 |
pfam00441 |
Acyl-CoA dehydrogenase, C-terminal domain; C-terminal domain of Acyl-CoA dehydrogenase is an ... |
294-441 |
8.21e-44 |
|
Acyl-CoA dehydrogenase, C-terminal domain; C-terminal domain of Acyl-CoA dehydrogenase is an all-alpha, four helical up-and-down bundle.
Pssm-ID: 395354 [Multi-domain] Cd Length: 149 Bit Score: 153.56 E-value: 8.21e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 294 GGGFKVAMNILNSGRFSMGSAVAGMLKKLIEQTAEYACTRKQFNRNLSEFGLIQEKFALMAQKAYVMESMAYLTSGMLDQ 373
Cdd:pfam00441 1 GRGFRVAMETLNHERLAIAAMALGLARRALDEALAYARRRKAFGRPLIDFQLVRHKLAEMAAEIEAARLLVYRAAEALDA 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 197313734 374 pGFPDcSIEAAMVKVFSSEAAWQCVSEALQILGGSGYMKDYPYERMLRDARILLIFEGTNEILRLFIA 441
Cdd:pfam00441 81 -GGPD-GAEASMAKLYASEAAVEVADLAMQLHGGYGYLREYPVERLYRDARVLRIGEGTSEIQRNIIA 146
|
|
| PLN02526 |
PLN02526 |
acyl-coenzyme A oxidase |
93-445 |
1.01e-38 |
|
acyl-coenzyme A oxidase
Pssm-ID: 178141 [Multi-domain] Cd Length: 412 Bit Score: 147.69 E-value: 1.01e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 93 QEGKIPADTLAKLKSLGLFGIQVpEEYGGLGLSNTMYA-RLGEIISMDASITVTLAAHQAIGLKGIILVGNEEQKAKYLP 171
Cdd:PLN02526 57 EKAEFPFHIIPKLGSLGIAGGTI-KGYGCPGLSITASAiATAEVARVDASCSTFILVHSSLAMLTIALCGSEAQKQKYLP 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 172 KLSSGEHIAAFCLTEPASGSDAASIQTRATLSEDKkyFVLNGSKVWITNGGLANIFTVFAKTevvdsdgSIKDKMTAFIV 251
Cdd:PLN02526 136 SLAQLDTVACWALTEPDYGSDASSLNTTATKVEGG--WILNGQKRWIGNSTFADVLVIFARN-------TTTNQINGFIV 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 252 ERDFGGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVgGGFKVAMNILNSGRFSMGSAVAGMLKKLIEQTAEYAC 331
Cdd:PLN02526 207 KKGAPGLKATKIENKIGLRMVQNGDIVLKDVFVPDEDRLPGV-NSFQDTNKVLAVSRVMVAWQPIGISMGVYDMCHRYLK 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 332 TRKQFNRNLSEFGLIQEKFALMAQKAYVMESMA------YLTSGMldQPGfpdcsiEAAMVKVFSSEAAWQCVSEALQIL 405
Cdd:PLN02526 286 ERKQFGAPLAAFQINQEKLVRMLGNIQAMFLVGwrlcklYESGKM--TPG------HASLGKAWITKKARETVALGRELL 357
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 197313734 406 GGSGYMKDYPYERMLRDARILLIFEGTNEILRLFIA--LTGL 445
Cdd:PLN02526 358 GGNGILADFLVAKAFCDLEPIYTYEGTYDINALVTGreITGI 399
|
|
| fadE |
PRK09463 |
acyl-CoA dehydrogenase; Reviewed |
58-409 |
4.63e-37 |
|
acyl-CoA dehydrogenase; Reviewed
Pssm-ID: 236528 [Multi-domain] Cd Length: 777 Bit Score: 147.66 E-value: 4.63e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 58 FPFPEVSQEELSEINqfvGPLEKFFnEEVDSRKIDQE-GKIPADTLAKLKSLGLFGIQVPEEYGGLGLSNTMYARlgeII 136
Cdd:PRK09463 74 YPKPTLTAEEQAFLD---GPVEELC-RMVNDWQITHElADLPPEVWQFIKEHGFFGMIIPKEYGGLEFSAYAHSR---VL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 137 ------SMDASITVT---------LAAHqaiglkgiilVGNEEQKAKYLPKLSSGEHIAAFCLTEPASGSDAASI----- 196
Cdd:PRK09463 147 qklasrSGTLAVTVMvpnslgpgeLLLH----------YGTDEQKDHYLPRLARGEEIPCFALTSPEAGSDAGSIpdtgv 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 197 ------QTRATLsedkkYFVLNGSKVWITnggLANIFTVFA---KteVVDSDGSIKDK----MTAFIVERDFGGITNGKP 263
Cdd:PRK09463 217 vckgewQGEEVL-----GMRLTWNKRYIT---LAPIATVLGlafK--LYDPDGLLGDKedlgITCALIPTDTPGVEIGRR 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 264 EDKLGirgsntceVHFEN--TR-----VPVENVLGE---VGGGFKVAMNILNSGR-FSMGSAVAGMLKKLIEQTAEYACT 332
Cdd:PRK09463 287 HFPLN--------VPFQNgpTRgkdvfIPLDYIIGGpkmAGQGWRMLMECLSVGRgISLPSNSTGGAKLAALATGAYARI 358
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 197313734 333 RKQFNRNLSEFGLIQEKFALMAQKAYVMESMAYLTSGMLDQPGFPdcSIEAAMVKVFSSEAAWQCVSEALQILGGSG 409
Cdd:PRK09463 359 RRQFKLPIGKFEGIEEPLARIAGNAYLMDAARTLTTAAVDLGEKP--SVLSAIAKYHLTERGRQVINDAMDIHGGKG 433
|
|
| AidB |
cd01154 |
Proteins involved in DNA damage response, similar to the AidB gene product; AidB is one of ... |
142-438 |
3.52e-36 |
|
Proteins involved in DNA damage response, similar to the AidB gene product; AidB is one of several genes involved in the SOS adaptive response to DNA alkylation damage, whose expression is activated by the Ada protein. Its function has not been entirely elucidated; however, it is similar in sequence and function to acyl-CoA dehydrogenases. It has been proposed that aidB directly destroys DNA alkylating agents such as nitrosoguanidines (nitrosated amides) or their reaction intermediates.
Pssm-ID: 173843 [Multi-domain] Cd Length: 418 Bit Score: 140.58 E-value: 3.52e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 142 ITVTLAAhqaigLKGIILVGNEEQKAKYLPKLSSGEH---IAAFCLTEPASGSDAASIQTRATLSEDKKYfVLNGSKvWI 218
Cdd:cd01154 113 LTMTDAA-----VYALRKYGPEELKQYLPGLLSDRYKtglLGGTWMTEKQGGSDLGANETTAERSGGGVY-RLNGHK-WF 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 219 TNGGLANIFTVFAKTEvvDSDGSIKDkMTAFIVER-DFGGITNG----KPEDKLGIRGSNTCEVHFENTrvpVENVLGEV 293
Cdd:cd01154 186 ASAPLADAALVLARPE--GAPAGARG-LSLFLVPRlLEDGTRNGyrirRLKDKLGTRSVATGEVEFDDA---EAYLIGDE 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 294 GGGFKVAMNILNSGRFSMGSAVAGMLKKLIEQTAEYACTRKQFNRNLSEFGLIQEKFALMAQKayVMESMAYL--TSGML 371
Cdd:cd01154 260 GKGIYYILEMLNISRLDNAVAALGIMRRALSEAYHYARHRRAFGKPLIDHPLMRRDLAEMEVD--VEAATALTfrAARAF 337
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 197313734 372 DQPGfPDCSIEAAMVKVFS-------SEAAWQCVSEALQILGGSGYMKDYPYERMLRDARILLIFEGTNEILRL 438
Cdd:cd01154 338 DRAA-ADKPVEAHMARLATpvakliaCKRAAPVTSEAMEVFGGNGYLEEWPVARLHREAQVTPIWEGTGNIQAL 410
|
|
| PTZ00456 |
PTZ00456 |
acyl-CoA dehydrogenase; Provisional |
103-435 |
1.53e-31 |
|
acyl-CoA dehydrogenase; Provisional
Pssm-ID: 185635 [Multi-domain] Cd Length: 622 Bit Score: 129.99 E-value: 1.53e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 103 AKLKSLGLFGIQVPEEYGGLGLSNTMYARLGEIISMdASITVTLAAHQAIG-LKGIILVGNEEQKAKYLPKLSSGEHIAA 181
Cdd:PTZ00456 106 QALKAGGWTGISEPEEYGGQALPLSVGFITRELMAT-ANWGFSMYPGLSIGaANTLMAWGSEEQKEQYLTKLVSGEWSGT 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 182 FCLTEPASGSDAASIQTRATLSEDKKYfVLNGSKVWITNGG---LANI-FTVFAKTEvvDSDGSIKDkMTAFIVER---- 253
Cdd:PTZ00456 185 MCLTEPQCGTDLGQVKTKAEPSADGSY-KITGTKIFISAGDhdlTENIvHIVLARLP--NSLPTTKG-LSLFLVPRhvvk 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 254 DFGGITNGKP------EDKLGIRGSNTCEVHFENTrvpVENVLGEVGGGFKVAMNILNSGRfsMGSAVAGML-KKLIEQT 326
Cdd:PTZ00456 261 PDGSLETAKNvkciglEKKMGIKGSSTCQLSFENS---VGYLIGEPNAGMKQMFTFMNTAR--VGTALEGVChAELAFQN 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 327 A-EYacTRKQFNRNLSEFGLIQEKFA------------LMAQKAyVME---SMAYLTSGMLD-QPGFPDCSIEAAM---- 385
Cdd:PTZ00456 336 AlRY--ARERRSMRALSGTKEPEKPAdriichanvrqnILFAKA-VAEggrALLLDVGRLLDiHAAAKDAATREALdhei 412
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 197313734 386 ------VKVFSSEAAWQCVSEALQILGGSGYMKDYPYERMLRDARILLIFEGTNEI 435
Cdd:PTZ00456 413 gfytpiAKGCLTEWGVEAASRCLQVWGGHGYIKGNGMEQILRDARIGTLYEGTTGI 468
|
|
| PRK13026 |
PRK13026 |
acyl-CoA dehydrogenase; Reviewed |
58-409 |
1.25e-30 |
|
acyl-CoA dehydrogenase; Reviewed
Pssm-ID: 237277 [Multi-domain] Cd Length: 774 Bit Score: 127.77 E-value: 1.25e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 58 FPFPEVSQEELSEINqfvGPLEKFFnEEVDSRKIDQEGK-IPADTLAKLKSLGLFGIQVPEEYGGLGLSNtmYARlGEII 136
Cdd:PRK13026 73 YPKPTLTAEEQAFID---NEVETLL-TMLDDWDIVQNRKdLPPEVWDYLKKEGFFALIIPKEYGGKGFSA--YAN-STIV 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 137 SMDA----SITVTLAAHQAIGlKGIILV--GNEEQKAKYLPKLSSGEHIAAFCLTEPASGSDAASIQTRATL------SE 204
Cdd:PRK13026 146 SKIAtrsvSAAVTVMVPNSLG-PGELLThyGTQEQKDYWLPRLADGTEIPCFALTGPEAGSDAGAIPDTGIVcrgefeGE 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 205 DKKYFVLNGSKVWITnggLANIFTV----FaktEVVDSDGSIKDK----MTAFIVERDFGGITNGKPEDKLGIRgsntce 276
Cdd:PRK13026 225 EVLGLRLTWDKRYIT---LAPVATVlglaF---KLRDPDGLLGDKkelgITCALIPTDHPGVEIGRRHNPLGMA------ 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 277 vhFEN--TR-----VPVENVLG---EVGGGFKVAMNILNSGRF----SMGSAVAGMLKKLieqTAEYACTRKQFNRNLSE 342
Cdd:PRK13026 293 --FMNgtTRgkdvfIPLDWIIGgpdYAGRGWRMLVECLSAGRGislpALGTASGHMATRT---TGAYAYVRRQFGMPIGQ 367
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 197313734 343 FGLIQEKFALMAQKAYVMESMAYLTSGMLDQPGFPdcSIEAAMVKVFSSEAAWQCVSEALQILGGSG 409
Cdd:PRK13026 368 FEGVQEALARIAGNTYLLEAARRLTTTGLDLGVKP--SVVTAIAKYHMTELARDVVNDAMDIHAGKG 432
|
|
| Acyl-CoA_dh_M |
pfam02770 |
Acyl-CoA dehydrogenase, middle domain; Central domain of Acyl-CoA dehydrogenase has a ... |
181-280 |
6.91e-29 |
|
Acyl-CoA dehydrogenase, middle domain; Central domain of Acyl-CoA dehydrogenase has a beta-barrel fold.
Pssm-ID: 460685 [Multi-domain] Cd Length: 95 Bit Score: 110.06 E-value: 6.91e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 181 AFCLTEPASGSDAASIQTRATLSEDKKYfVLNGSKVWITNGGLANIFTVFAKTEvvdsDGSIKDKMTAFIVERDFGGITN 260
Cdd:pfam02770 1 AFALTEPGAGSDVASLKTTAADGDGGGW-VLNGTKWWITNAGIADLFLVLARTG----GDDRHGGISLFLVPKDAPGVSV 75
|
90 100
....*....|....*....|
gi 197313734 261 GKPEDKLGIRGSNTCEVHFE 280
Cdd:pfam02770 76 RRIETKLGVRGLPTGELVFD 95
|
|
| Acyl-CoA_dh_N |
pfam02771 |
Acyl-CoA dehydrogenase, N-terminal domain; The N-terminal domain of Acyl-CoA dehydrogenase is ... |
80-177 |
2.43e-28 |
|
Acyl-CoA dehydrogenase, N-terminal domain; The N-terminal domain of Acyl-CoA dehydrogenase is an all-alpha domain.
Pssm-ID: 460686 [Multi-domain] Cd Length: 113 Bit Score: 109.47 E-value: 2.43e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 80 KFFNEEV--DSRKIDQEGKIPADTLAKLKSLGLFGIQVPEEYGGLGLSNTMYARLGEIISM-DASITVTLAAHQAIGLKG 156
Cdd:pfam02771 13 EFAEEEIapHAAEWDEEGEFPRELWKKLGELGLLGITIPEEYGGAGLDYLAYALVAEELARaDASVALALSVHSSLGAPP 92
|
90 100
....*....|....*....|.
gi 197313734 157 IILVGNEEQKAKYLPKLSSGE 177
Cdd:pfam02771 93 ILRFGTEEQKERYLPKLASGE 113
|
|
| PTZ00457 |
PTZ00457 |
acyl-CoA dehydrogenase; Provisional |
88-575 |
1.55e-26 |
|
acyl-CoA dehydrogenase; Provisional
Pssm-ID: 185636 [Multi-domain] Cd Length: 520 Bit Score: 113.82 E-value: 1.55e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 88 SRKIDQEgkiPADTLAKL--------KSLG-LFGIQVPEEYGGLGLSNTMYARLGEIISMDA-SITVTLAAHQAIGLKGI 157
Cdd:PTZ00457 37 CRKLDGD---EAENLQSLleqirsndKILGnLYGARIATEYGGLGLGHTAHALIYEEVGTNCdSKLLSTIQHSGFCTYLL 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 158 ILVGNEEQKAKYLPKLSSGEHIAAFClTEPASGSDAASIQTRATLSEDKKYfVLNGSKvWITNGGLANIFTVFAKT--EV 235
Cdd:PTZ00457 114 STVGSKELKGKYLTAMSDGTIMMGWA-TEEGCGSDISMNTTKASLTDDGSY-VLTGQK-RCEFAASATHFLVLAKTltQT 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 236 VDSDGSIK-DKMTAFIVERDFGGITngkpedklgIRGSNtceVHFENTrvPVENVLGEVGGGFKVAMNILNSGRFSMGSA 314
Cdd:PTZ00457 191 AAEEGATEvSRNSFFICAKDAKGVS---------VNGDS---VVFENT--PAADVVGVVGEGFKDAMITLFTEQYLYAAS 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 315 VAGMLKKLIEQTAEyactrkqfnrNLSEFGlIQEKFALMAQKAYVMESMAYLTSGMLDQPGfPDCSIEAAMVKVFSSEAa 394
Cdd:PTZ00457 257 LLGIMKRVVQELRG----------SNAEEG-ATDTVASFACAMYAMESTLYALTANLDLPT-EDSLLECTLVSAFVQST- 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 395 wqcVSEALQILGGSGYMKDYpYERMLRDARILLIFEGTNEILRLFIALTGLQHAGRILTsrikelksgNVTTVMETIGRK 474
Cdd:PTZ00457 324 ---TNQLLSILETATPPSTT-LEKCFANARLFLSMMESRDFLYSSAVCCGVEDYGLFFQ---------RASTLQMMQART 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 475 LRdslgrtvDLGLSSNIAVvhPSLGDSAnKLEENVHYFGRTVETLLLRFGKTIVEEQLVLKRVANILINLYGMTAVLSRA 554
Cdd:PTZ00457 391 LR-------SLGVRDRVPI--KNLPDCS-LIDEAVVAFGNAVEATFVRSGSQVPYQQLLLNRLGEAASLLYAASAVASRA 460
|
490 500
....*....|....*....|.
gi 197313734 555 SRSIRIGLKNHDHEILLANMF 575
Cdd:PTZ00457 461 SMCVSKGLPSAKVEGELASAF 481
|
|
| PLN02876 |
PLN02876 |
acyl-CoA dehydrogenase |
97-448 |
4.32e-21 |
|
acyl-CoA dehydrogenase
Pssm-ID: 215473 [Multi-domain] Cd Length: 822 Bit Score: 97.94 E-value: 4.32e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 97 IPADTLAKLKSLGLFGIQVP------EEYGGLGLSNTMYARLGEII--SMDASITVTLAAHQAIGLKGIILVGNEEQKAK 168
Cdd:PLN02876 461 IPLDSAARARKLLFEDNKHMvsgdsaDQLLGAGLSNLEYGYLCEIMgrSVWAPQVFNCGAPDTGNMEVLLRYGNKEQQLE 540
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 169 YLPKLSSGEHIAAFCLTEP-ASGSDAASIQtrATLSEDKKYFVLNGSKvWITNGGL---ANIFTVFAKTevvDSDGSIKD 244
Cdd:PLN02876 541 WLIPLLEGKIRSGFAMTEPqVASSDATNIE--CSIRRQGDSYVINGTK-WWTSGAMdprCRVLIVMGKT---DFNAPKHK 614
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 245 KMTAFIVERDFGGITNGKPEDKLGIRGS--NTCEVHFENTRVPVENVLGEVGGGFKVAMNILNSGRFS-----MGSAVAG 317
Cdd:PLN02876 615 QQSMILVDIQTPGVQIKRPLLVFGFDDAphGHAEISFENVRVPAKNILLGEGRGFEIAQGRLGPGRLHhcmrlIGAAERG 694
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 318 MlkkliEQTAEYACTRKQFNRNLSEFG-----LIQEKFALMAQKAYVMESmayltSGMLDQPGFPDCSIEAAMVKVFSSE 392
Cdd:PLN02876 695 M-----QLMVQRALSRKAFGKLIAQHGsflsdLAKCRVELEQTRLLVLEA-----ADQLDRLGNKKARGIIAMAKVAAPN 764
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 197313734 393 AAWQCVSEALQILGGSGYMKDYPYERMLRDARILLIFEGTNEILRLFIALTGLQHA 448
Cdd:PLN02876 765 MALKVLDMAMQVHGAAGVSSDTVLAHLWATARTLRIADGPDEVHLGTIAKLELQRA 820
|
|
| AXO |
cd01150 |
Peroxisomal acyl-CoA oxidase; Peroxisomal acyl-CoA oxidases (AXO) catalyze the first set in ... |
104-458 |
1.78e-18 |
|
Peroxisomal acyl-CoA oxidase; Peroxisomal acyl-CoA oxidases (AXO) catalyze the first set in the peroxisomal fatty acid beta-oxidation, the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. In a second oxidative half-reaction, the reduced FAD is reoxidized by molecular oxygen. AXO is generally a homodimer, but it has been reported to form a different type of oligomer in yeast. There are several subtypes of AXO's, based on substrate specificity. Palmitoyl-CoA oxidase acts on straight-chain fatty acids and prostanoids; whereas, the closely related Trihydroxycoprostanoly-CoA oxidase has the greatest activity for 2-methyl branched side chains of bile precursors. Pristanoyl-CoA oxidase, acts on 2-methyl branched fatty acids. AXO has an additional domain, C-terminal to the region with similarity to acyl-CoA dehydrogenases, which is included in this alignment.
Pssm-ID: 173839 [Multi-domain] Cd Length: 610 Bit Score: 89.31 E-value: 1.78e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 104 KLKSLGLFGIQVPEEYGGLGLSNTMYarlgeiismDASITVTLAAHQAIGLKGIILVGNEEQKAKYLPKLSSGEHIAAFC 183
Cdd:cd01150 69 DVERMGELMADDPEKMLALTNSLGGY---------DLSLGAKLGLHLGLFGNAIKNLGTDEHQDYWLQGANNLEIIGCFA 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 184 LTEPASGSDAASIQTRATLSEDKKYFVLN-----GSKVWItnGGL---ANIFTVFAKTEVVDSDGSIKdkmtAFIVE-RD 254
Cdd:cd01150 140 QTELGHGSNLQGLETTATYDPLTQEFVINtpdftATKWWP--GNLgktATHAVVFAQLITPGKNHGLH----AFIVPiRD 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 255 FG------GITNGKPEDKLGIRGSNTCEVHFENTRVPVENVL---GEV-------------GGGFKVAMNILNSGRFSMG 312
Cdd:cd01150 214 PKthqplpGVTVGDIGPKMGLNGVDNGFLQFRNVRIPRENLLnrfGDVspdgtyvspfkdpNKRYGAMLGTRSGGRVGLI 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 313 SAVAGMLKKLIEQTAEYACTRKQFNRNLS-------EFGLIQEK--------FAL-MAQKAYVMESMAYLTSGMLDQPGF 376
Cdd:cd01150 294 YDAAMSLKKAATIAIRYSAVRRQFGPKPSdpevqilDYQLQQYRlfpqlaaaYAFhFAAKSLVEMYHEIIKELLQGNSEL 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 377 -PDCSIEAAMVKVFSSEAAWQCVSEALQILGGSGYMKDYPYERMLRDARILLIFEGTNEILrlfialtgLQHAGRILTSR 455
Cdd:cd01150 374 lAELHALSAGLKAVATWTAAQGIQECREACGGHGYLAMNRLPTLRDDNDPFCTYEGDNTVL--------LQQTANYLLKK 445
|
...
gi 197313734 456 IKE 458
Cdd:cd01150 446 YAQ 448
|
|
| DszC |
cd01163 |
Dibenzothiophene (DBT) desulfurization enzyme C; DszC is a flavin reductase dependent enzyme, ... |
92-424 |
2.19e-15 |
|
Dibenzothiophene (DBT) desulfurization enzyme C; DszC is a flavin reductase dependent enzyme, which catalyzes the first two steps of DBT desulfurization in mesophilic bacteria. DszC converts DBT to DBT-sulfoxide, which is then converted to DBT-sulfone. Bacteria with this enzyme are candidates for the removal of organic sulfur compounds from fossil fuels, which pollute the environment. An equivalent enzyme tdsC, is found in thermophilic bacteria. This alignment also contains a closely related uncharacterized subgroup.
Pssm-ID: 173852 [Multi-domain] Cd Length: 377 Bit Score: 78.13 E-value: 2.19e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 92 DQEGKIPADTLAKLKSLGLFGIQVPEEYGGLGLS-NTMYARLGEIISMDASITVTLAAHQAIgLKGIILVGNEEQKAKYL 170
Cdd:cd01163 18 DRQRGLPYEEVALLRQSGLGTLRVPKEYGGLGASlPDLYEVVRELAAADSNIAQALRAHFGF-VEALLLAGPEQFRKRWF 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 171 PKLSSGeHIAAFCLTEpaSGSDAASIQTRATLSEDKKYfVLNGSKvWITNGGLaniFTVFAKTEVVDSDGsikdKMTAFI 250
Cdd:cd01163 97 GRVLNG-WIFGNAVSE--RGSVRPGTFLTATVRDGGGY-VLNGKK-FYSTGAL---FSDWVTVSALDEEG----KLVFAA 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 251 VERDFGGITNGKPEDKLGIR--GSNTceVHFENTRVPVENVLGEVGGGFkvamnilnsgRFSMGSAV---------AGML 319
Cdd:cd01163 165 VPTDRPGITVVDDWDGFGQRltASGT--VTFDNVRVEPDEVLPRPNAPD----------RGTLLTAIyqlvlaavlAGIA 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 320 KKLIEQTAEYACTRKqfnRNL--------SEFGLIQEKFALMAQKAYVMESM----------AYLTSGMLDQPGFPDCSI 381
Cdd:cd01163 233 RAALDDAVAYVRSRT---RPWihsgaesaRDDPYVQQVVGDLAARLHAAEALvlqaaraldaAAAAGTALTAEARGEAAL 309
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 197313734 382 EAAMVKVFSSEAAWQCVSEALQILGGSGYMKDYPYERMLRDAR 424
Cdd:cd01163 310 AVAAAKVVVTRLALDATSRLFEVGGASATAREHNLDRHWRNAR 352
|
|
| PLN02636 |
PLN02636 |
acyl-coenzyme A oxidase |
137-480 |
3.79e-14 |
|
acyl-coenzyme A oxidase
Pssm-ID: 215342 [Multi-domain] Cd Length: 686 Bit Score: 75.66 E-value: 3.79e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 137 SMDASITVTLAAHQAIGLKGIILVGNEEQKAKYLPKLSSGEHIAAFCLTEPASGSDAASIQTRATLSEDKKYFVLN---- 212
Cdd:PLN02636 132 SVDMSLGIKLGVQYSLWGGSVINLGTKKHRDKYFDGIDNLDYPGCFAMTELHHGSNVQGLQTTATFDPLTDEFVINtpnd 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 213 -GSKVWITNGGLANIF-TVFAKTEVVDSDGSIKDKMT--AFIVE-RDFG------GITNGKPEDKLGIRGSNTCEVHFEN 281
Cdd:PLN02636 212 gAIKWWIGNAAVHGKFaTVFARLKLPTHDSKGVSDMGvhAFIVPiRDMKthqvlpGVEIRDCGHKVGLNGVDNGALRFRS 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 282 TRVPVENVLGEVG-----GGFKVAMNILNS-----------GRFSMGSAVAGMLKKLIEQTAEYACTRKQFN-RNLSEFG 344
Cdd:PLN02636 292 VRIPRDNLLNRFGdvsrdGKYTSSLPTINKrfaatlgelvgGRVGLAYGSVGVLKASNTIAIRYSLLRQQFGpPKQPEIS 371
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 345 LI-----QEKFALMAQKAYVME-SMAYLT---SGML---DQPGFPDCSIEAAMVKVFSSEAAWQCVSEALQILGGSGYMK 412
Cdd:PLN02636 372 ILdyqsqQHKLMPMLASTYAFHfATEYLVerySEMKkthDDQLVADVHALSAGLKAYITSYTAKALSTCREACGGHGYAA 451
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 197313734 413 DYPYERMLRDARILLIFEGTNEILrlfialtgLQHAGRILTSRIKELKSGNVTTVMETIgrkLRDSLG 480
Cdd:PLN02636 452 VNRFGSLRNDHDIFQTFEGDNTVL--------LQQVAADLLKQYKEKFQGGTLSVTWNY---LRESMN 508
|
|
| Acyl-CoA_dh_2 |
pfam08028 |
Acyl-CoA dehydrogenase, C-terminal domain; |
310-434 |
2.00e-10 |
|
Acyl-CoA dehydrogenase, C-terminal domain;
Pssm-ID: 429790 [Multi-domain] Cd Length: 133 Bit Score: 58.90 E-value: 2.00e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 310 SMGSAVAGMLKKLIEQTAEYACTRKQ--FNRNLSEFGLIQEKFALMA----QKAYVMESMAYLTSGMLDQ--PGFPDCSI 381
Cdd:pfam08028 1 GIAAAALGAARAALAEFTERARGRVRayFGVPLAEDPATQLALAEAAaridAARLLLERAAARIEAAAAAgkPVTPALRA 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 197313734 382 EAAMVKVFSSEAAWQCVSEALQILGGSGYMKDYPYERMLRDARILLIFEGTNE 434
Cdd:pfam08028 81 EARRAAAFATELAVAAVDALFRAAGGSALFQDSPLQRIWRDIHAAAQHAAVNP 133
|
|
| PRK11561 |
PRK11561 |
isovaleryl CoA dehydrogenase; Provisional |
184-438 |
3.19e-09 |
|
isovaleryl CoA dehydrogenase; Provisional
Pssm-ID: 183199 [Multi-domain] Cd Length: 538 Bit Score: 59.77 E-value: 3.19e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 184 LTEPASGSDAASIQTRATLSEDKKYfVLNGSKvWITNGGLANIFTVFAKTevvdsdgsiKDKMTAFIVERDF-GGITNG- 261
Cdd:PRK11561 184 MTEKQGGSDVLSNTTRAERLADGSY-RLVGHK-WFFSVPQSDAHLVLAQA---------KGGLSCFFVPRFLpDGQRNAi 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 262 ---KPEDKLGIRGSNTCEVHFENTrvpVENVLGEVGGGFKvamNILNSG---RFSMGSAVAGMLKKLIEQTAEYACTRKQ 335
Cdd:PRK11561 253 rleRLKDKLGNRSNASSEVEFQDA---IGWLLGEEGEGIR---LILKMGgmtRFDCALGSHGLMRRAFSVAIYHAHQRQV 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 336 FNRNLSEFGLIQEKFALMAQKAYVMESMAYLTSGMLDQPGFPDcsiEAAMVKVFSSEAAWQ-C------VSEALQILGGS 408
Cdd:PRK11561 327 FGKPLIEQPLMRQVLSRMALQLEGQTALLFRLARAWDRRADAK---EALWARLFTPAAKFViCkrgipfVAEAMEVLGGI 403
|
250 260 270
....*....|....*....|....*....|
gi 197313734 409 GYMKDYPYERMLRDARILLIFEGTNEILRL 438
Cdd:PRK11561 404 GYCEESELPRLYREMPVNSIWEGSGNIMCL 433
|
|
| PTZ00460 |
PTZ00460 |
acyl-CoA dehydrogenase; Provisional |
136-551 |
6.56e-09 |
|
acyl-CoA dehydrogenase; Provisional
Pssm-ID: 185639 [Multi-domain] Cd Length: 646 Bit Score: 58.70 E-value: 6.56e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 136 ISMDASITVTlAAHQAIGLKGIILVGNEEQKAKYLPKLSSGEHIAAFCLTEPASGSDAASIQTRATLSEDKKYFVLN--- 212
Cdd:PTZ00460 86 LLCPQGTFIS-TVHFAMVIPAFQVLGTDEQINLWMPSLLNFEIVGCYAQTELGHGSDVQNLETTATYDKQTNEFVIHtps 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 213 --GSKVWITN-GGLANIFTVFAKTeVVDSDG--------SIKDKMTafivERDFGGITNGKPEDKLGIRGSNTCEVHFEN 281
Cdd:PTZ00460 165 veAVKFWPGElGFLCNFALVYAKL-IVNGKNkgvhpfmvRIRDKET----HKPLQGVEVGDIGPKMGYAVKDNGFLSFDH 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 282 TRVPVENVLGEVgggFKVAMN--ILNSGRFSMGSAVAGMLKKLI----EQTA--------EYACTRKQF-NRNLSE---- 342
Cdd:PTZ00460 240 YRIPLDSLLARY---IKVSEDgqVERQGNPKVSYASMMYMRNLIidqyPRFAaqaltvaiRYSIYRQQFtNDNKQEnsvl 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 343 ---------FGLIQEKFALMAQKAYVME--------------SMAYLTSGMLdqpgfpdCSIEAAMVKVFSSEAAWQCVS 399
Cdd:PTZ00460 317 eyqtqqqklLPLLAEFYACIFGGLKIKElvddnfnrvqkndfSLLQLTHAIL-------SAAKANYTYFVSNCAEWCRLS 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 400 ealqiLGGSGYMKDYPYERMLRDARILLIFEGTNEILRLFIA---LTGLQHAGR-----------------------ILT 453
Cdd:PTZ00460 390 -----CGGHGYAHYSGLPAIYFDMSPNITLEGENQIMYLQLArylLKQLQHAVQkpekvpeyfnflshitekladqtTIE 464
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 454 SRIKELKSgNVTTVMETIGRKLRDSLGRTVDLGLSSNiAVVHPSLGDSANKLEEnvhYFgrtvetLLLRFGKTIVEEQLV 533
Cdd:PTZ00460 465 SLGQLLGL-NCTILTIYAAKKIMDHINTGKDFQQSWD-TKSGIALASAASRFIE---YF------NYLCFLDTINNANKS 533
|
490
....*....|....*...
gi 197313734 534 LKRVANILINLYGMTAVL 551
Cdd:PTZ00460 534 TKEILTQLADLYGITMLL 551
|
|
| PLN02443 |
PLN02443 |
acyl-coenzyme A oxidase |
161-462 |
2.85e-06 |
|
acyl-coenzyme A oxidase
Pssm-ID: 178062 [Multi-domain] Cd Length: 664 Bit Score: 50.22 E-value: 2.85e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 161 GNEEQKAKYLPKLSSGEHIAAFCLTEPASGSDAASIQTRATLSEDKKYFVLN-----GSKVWitNGGLANIFT---VFAK 232
Cdd:PLN02443 114 GTEEQQKKWLPLAYKMQIIGCYAQTELGHGSNVQGLETTATFDPKTDEFVIHsptltSSKWW--PGGLGKVSThavVYAR 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 233 TEVVDSDGSIKdkmtAFIVE-------RDFGGITNGKPEDKLGIRGSNTCE---VHFENTRVPVENVLGEVGG----GFK 298
Cdd:PLN02443 192 LITNGKDHGIH----GFIVQlrslddhSPLPGVTVGDIGMKFGNGAYNTMDngfLRFDHVRIPRDQMLMRLSKvtreGKY 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 299 VAMNI---LNSG-----RFSMGSAVAGMLKKLIEQTAEYACTRKQF--NRNLSEFGLIQEK------FALMAQkAY---- 358
Cdd:PLN02443 268 VQSDVprqLVYGtmvyvRQTIVADASTALSRAVCIATRYSAVRRQFgsQDGGPETQVIDYKtqqsrlFPLLAS-AYafrf 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 359 VMESMAYLTSGML------DQPGFPDCSIEAAMVKVFSSEAAWQCVSEALQILGGSGYMKDYPYERMLRDARILLIFEGT 432
Cdd:PLN02443 347 VGEWLKWLYTDVTqrleanDFSTLPEAHACTAGLKSLTTSATADGIEECRKLCGGHGYLCSSGLPELFAVYVPACTYEGD 426
|
330 340 350
....*....|....*....|....*....|
gi 197313734 433 NEILRLFIAltglqhagRILTSRIKELKSG 462
Cdd:PLN02443 427 NVVLLLQVA--------RFLMKTVSQLGSG 448
|
|
| PLN02312 |
PLN02312 |
acyl-CoA oxidase |
130-336 |
1.88e-05 |
|
acyl-CoA oxidase
Pssm-ID: 215178 [Multi-domain] Cd Length: 680 Bit Score: 47.85 E-value: 1.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 130 ARLGEIISM-DASITVTLAAHQAIGLKGIILVGNEEQKAKYLPKLSSGEHIAAFCLTEPASGSDAASIQTRATLSEDKKY 208
Cdd:PLN02312 136 LALLEVIGIyDHSLAIKLGVHFFLWGGAIKFLGTKRHHDKWLKDTEDYVVKGCFAMTELGHGSNVRGIETVTTYDPKTEE 215
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 197313734 209 FVLN-----GSKVWItnGGLANIFT---VFAKTEVvdsDGSiKDKMTAFIVE-RDFGG--ITNGKPED---KLGIRGSNT 274
Cdd:PLN02312 216 FVINtpcesAQKYWI--GGAANHAThtiVFSQLHI---NGK-NEGVHAFIAQiRDQDGniCPNIRIADcghKIGLNGVDN 289
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 197313734 275 CEVHFENTRVPVENVLGEV-----GGGFKVA-----------MNILNSGRFSMGSAVAGMLKKLIEQTAEYACTRKQF 336
Cdd:PLN02312 290 GRIWFDNLRIPRENLLNSVadvspDGKYVSAikdpdqrfgafLAPLTSGRVTIAVSAIYSSKVGLAIAIRYSLSRRAF 367
|
|
|