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Conserved domains on  [gi|269914183|ref|NP_849190|]
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organic solute transporter subunit beta [Homo sapiens]

Protein Classification

OSTbeta domain-containing protein( domain architecture ID 10633341)

OSTbeta domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
OSTbeta pfam15048
Organic solute transporter subunit beta protein;
3-122 1.13e-74

Organic solute transporter subunit beta protein;


:

Pssm-ID: 405697  Cd Length: 122  Bit Score: 217.31  E-value: 1.13e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 269914183    3 HSEGAPGDPAGTVVPQELLEEMLWFFRVEDASPWNHSILALAAVVVIISMVLLGRSIQASRKEKMQPPEKETPEVLHLDE 82
Cdd:pfam15048   1 HSEGAEGAPAGTVVPQELLEEMLWFFRVEDASPWNYSILALAAVVVVISVVLLGRSIQANRNRKMQPPEKETPEVLYLAE 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 269914183   83 A--KDHNSLNNLRETLLSEKPNLAQVELELKERDVLSVFLPD 122
Cdd:pfam15048  81 AgtKDDNSLNILRETLLSEKPNLAQVEIELKERDVSLVLLPD 122
 
Name Accession Description Interval E-value
OSTbeta pfam15048
Organic solute transporter subunit beta protein;
3-122 1.13e-74

Organic solute transporter subunit beta protein;


Pssm-ID: 405697  Cd Length: 122  Bit Score: 217.31  E-value: 1.13e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 269914183    3 HSEGAPGDPAGTVVPQELLEEMLWFFRVEDASPWNHSILALAAVVVIISMVLLGRSIQASRKEKMQPPEKETPEVLHLDE 82
Cdd:pfam15048   1 HSEGAEGAPAGTVVPQELLEEMLWFFRVEDASPWNYSILALAAVVVVISVVLLGRSIQANRNRKMQPPEKETPEVLYLAE 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 269914183   83 A--KDHNSLNNLRETLLSEKPNLAQVELELKERDVLSVFLPD 122
Cdd:pfam15048  81 AgtKDDNSLNILRETLLSEKPNLAQVEIELKERDVSLVLLPD 122
 
Name Accession Description Interval E-value
OSTbeta pfam15048
Organic solute transporter subunit beta protein;
3-122 1.13e-74

Organic solute transporter subunit beta protein;


Pssm-ID: 405697  Cd Length: 122  Bit Score: 217.31  E-value: 1.13e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 269914183    3 HSEGAPGDPAGTVVPQELLEEMLWFFRVEDASPWNHSILALAAVVVIISMVLLGRSIQASRKEKMQPPEKETPEVLHLDE 82
Cdd:pfam15048   1 HSEGAEGAPAGTVVPQELLEEMLWFFRVEDASPWNYSILALAAVVVVISVVLLGRSIQANRNRKMQPPEKETPEVLYLAE 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 269914183   83 A--KDHNSLNNLRETLLSEKPNLAQVELELKERDVLSVFLPD 122
Cdd:pfam15048  81 AgtKDDNSLNILRETLLSEKPNLAQVEIELKERDVSLVLLPD 122
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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