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Conserved domains on  [gi|25952102|ref|NP_741980|]
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calcium-activated potassium channel subunit beta-3 isoform b [Homo sapiens]

Protein Classification

CaKB domain-containing protein( domain architecture ID 10504988)

CaKB domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
CaKB pfam03185
Calcium-activated potassium channel, beta subunit;
27-221 8.48e-127

Calcium-activated potassium channel, beta subunit;


:

Pssm-ID: 460838  Cd Length: 195  Bit Score: 357.73  E-value: 8.48e-127
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25952102    27 LPSSAGEDRAVMLGFAMMGFSVLMFFLLGTTILKPFMLSIQREESTCTAIHTDIMDDWLDCAFTCGVHCHGQGKYPCLQV 106
Cdd:pfam03185   1 TASSAGEDRAILLGFAMMACSVLMYFVLGITVLKPYLQSVWTEEANCTVLNVDILDEWVDCSFSCGSDCRGVSQYPCLQV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25952102   107 FVNLSHPGQKALLHYNEEAVQINPKCFYTPKCHQDRNDLLNSALDIKEFFDHKNGTPFSCFYSPASQSEDVILIKKYDQM 186
Cdd:pfam03185  81 YVNLSSSGKVALLHHDEETLDLNPKCFYIPKCQRDYQELLESVENIKENFKKHNGQPFPCYYDPSERPEDVILTRKYDPS 160
                         170       180       190
                  ....*....|....*....|....*....|....*
gi 25952102   187 AIFHCLFWPSLTLLGGALIVGMVRLTQHLSLLCEK 221
Cdd:pfam03185 161 VLLHCLLWPSLMLLGGVLIVGMVKLTQHLSVLCER 195
 
Name Accession Description Interval E-value
CaKB pfam03185
Calcium-activated potassium channel, beta subunit;
27-221 8.48e-127

Calcium-activated potassium channel, beta subunit;


Pssm-ID: 460838  Cd Length: 195  Bit Score: 357.73  E-value: 8.48e-127
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25952102    27 LPSSAGEDRAVMLGFAMMGFSVLMFFLLGTTILKPFMLSIQREESTCTAIHTDIMDDWLDCAFTCGVHCHGQGKYPCLQV 106
Cdd:pfam03185   1 TASSAGEDRAILLGFAMMACSVLMYFVLGITVLKPYLQSVWTEEANCTVLNVDILDEWVDCSFSCGSDCRGVSQYPCLQV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25952102   107 FVNLSHPGQKALLHYNEEAVQINPKCFYTPKCHQDRNDLLNSALDIKEFFDHKNGTPFSCFYSPASQSEDVILIKKYDQM 186
Cdd:pfam03185  81 YVNLSSSGKVALLHHDEETLDLNPKCFYIPKCQRDYQELLESVENIKENFKKHNGQPFPCYYDPSERPEDVILTRKYDPS 160
                         170       180       190
                  ....*....|....*....|....*....|....*
gi 25952102   187 AIFHCLFWPSLTLLGGALIVGMVRLTQHLSLLCEK 221
Cdd:pfam03185 161 VLLHCLLWPSLMLLGGVLIVGMVKLTQHLSVLCER 195
 
Name Accession Description Interval E-value
CaKB pfam03185
Calcium-activated potassium channel, beta subunit;
27-221 8.48e-127

Calcium-activated potassium channel, beta subunit;


Pssm-ID: 460838  Cd Length: 195  Bit Score: 357.73  E-value: 8.48e-127
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25952102    27 LPSSAGEDRAVMLGFAMMGFSVLMFFLLGTTILKPFMLSIQREESTCTAIHTDIMDDWLDCAFTCGVHCHGQGKYPCLQV 106
Cdd:pfam03185   1 TASSAGEDRAILLGFAMMACSVLMYFVLGITVLKPYLQSVWTEEANCTVLNVDILDEWVDCSFSCGSDCRGVSQYPCLQV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 25952102   107 FVNLSHPGQKALLHYNEEAVQINPKCFYTPKCHQDRNDLLNSALDIKEFFDHKNGTPFSCFYSPASQSEDVILIKKYDQM 186
Cdd:pfam03185  81 YVNLSSSGKVALLHHDEETLDLNPKCFYIPKCQRDYQELLESVENIKENFKKHNGQPFPCYYDPSERPEDVILTRKYDPS 160
                         170       180       190
                  ....*....|....*....|....*....|....*
gi 25952102   187 AIFHCLFWPSLTLLGGALIVGMVRLTQHLSLLCEK 221
Cdd:pfam03185 161 VLLHCLLWPSLMLLGGVLIVGMVKLTQHLSVLCER 195
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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