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Conserved domains on  [gi|24111764|ref|NP_706274|]
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pyrroline-5-carboxylate reductase [Shigella flexneri 2a str. 301]

Protein Classification

pyrroline-5-carboxylate reductase( domain architecture ID 11485643)

pyrroline-5-carboxylate reductase catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline

EC:  1.5.1.2
Gene Ontology:  GO:0004735|GO:0006561|GO:0055129
PubMed:  6296787|13502341

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK11880 PRK11880
pyrroline-5-carboxylate reductase; Reviewed
1-269 6.87e-131

pyrroline-5-carboxylate reductase; Reviewed


:

Pssm-ID: 237008 [Multi-domain]  Cd Length: 267  Bit Score: 371.02  E-value: 6.87e-131
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764    1 MEKKIGFIGCGNMGKAILGGLIASGqVLPGQIWVYTPSPDKVAALHDQFGINAAESAQEVAQIADIIFAAVKPGIMIKVL 80
Cdd:PRK11880   1 MMKKIGFIGGGNMASAIIGGLLASG-VPAKDIIVSDPSPEKRAALAEEYGVRAATDNQEAAQEADVVVLAVKPQVMEEVL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764   81 SEITSSLNKdsLVVSIAAGVTLDQLARALGHDRKIIRAMPNTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVI 160
Cdd:PRK11880  80 SELKGQLDK--LVVSIAAGVTLARLERLLGADLPVVRAMPNTPALVGAGMTALTANALVSAEDRELVENLLSAFGKVVWV 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764  161 A-EPMIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLETGEHPGALKDMVCSPGGTTIEA 239
Cdd:PRK11880 158 DdEKQMDAVTAVSGSGPAYVFLFIEALADAGVKLGLPREQARKLAAQTVLGAAKLLLESGEHPAELRDNVTSPGGTTIAA 237
                        250       260       270
                 ....*....|....*....|....*....|
gi 24111764  240 VRVLEEKGFRAAVIEAMTKCMEKSEKLSKS 269
Cdd:PRK11880 238 LRVLEEKGLRAAVIEAVQAAAKRSKELGKE 267
 
Name Accession Description Interval E-value
PRK11880 PRK11880
pyrroline-5-carboxylate reductase; Reviewed
1-269 6.87e-131

pyrroline-5-carboxylate reductase; Reviewed


Pssm-ID: 237008 [Multi-domain]  Cd Length: 267  Bit Score: 371.02  E-value: 6.87e-131
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764    1 MEKKIGFIGCGNMGKAILGGLIASGqVLPGQIWVYTPSPDKVAALHDQFGINAAESAQEVAQIADIIFAAVKPGIMIKVL 80
Cdd:PRK11880   1 MMKKIGFIGGGNMASAIIGGLLASG-VPAKDIIVSDPSPEKRAALAEEYGVRAATDNQEAAQEADVVVLAVKPQVMEEVL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764   81 SEITSSLNKdsLVVSIAAGVTLDQLARALGHDRKIIRAMPNTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVI 160
Cdd:PRK11880  80 SELKGQLDK--LVVSIAAGVTLARLERLLGADLPVVRAMPNTPALVGAGMTALTANALVSAEDRELVENLLSAFGKVVWV 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764  161 A-EPMIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLETGEHPGALKDMVCSPGGTTIEA 239
Cdd:PRK11880 158 DdEKQMDAVTAVSGSGPAYVFLFIEALADAGVKLGLPREQARKLAAQTVLGAAKLLLESGEHPAELRDNVTSPGGTTIAA 237
                        250       260       270
                 ....*....|....*....|....*....|
gi 24111764  240 VRVLEEKGFRAAVIEAMTKCMEKSEKLSKS 269
Cdd:PRK11880 238 LRVLEEKGLRAAVIEAVQAAAKRSKELGKE 267
ProC COG0345
Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]; ...
1-268 1.28e-130

Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]; Pyrroline-5-carboxylate reductase is part of the Pathway/BioSystem: Proline biosynthesis


Pssm-ID: 440114 [Multi-domain]  Cd Length: 267  Bit Score: 370.55  E-value: 1.28e-130
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764   1 MEKKIGFIGCGNMGKAILGGLIASGqVLPGQIWVYTPSPDKVAALHDQFGINAAESAQEVAQIADIIFAAVKPGIMIKVL 80
Cdd:COG0345   1 MSMKIGFIGAGNMGSAIIKGLLKSG-VPPEDIIVSDRSPERLEALAERYGVRVTTDNAEAAAQADVVVLAVKPQDLAEVL 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764  81 SEITSSLNKDSLVVSIAAGVTLDQLARALGHDRKIIRAMPNTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVI 160
Cdd:COG0345  80 EELAPLLDPDKLVISIAAGVTLATLEEALGGGAPVVRAMPNTPALVGEGVTALAAGEAVSEEDRELVEALFSAVGKVVWV 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764 161 AEPMIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLETGEHPGALKDMVCSPGGTTIEAV 240
Cdd:COG0345 160 DEELMDAVTALSGSGPAYVFLFIEAMADAGVALGLPRETARELAAQTVLGAAKLLLESGEHPAELRDRVTSPGGTTIAGL 239
                       250       260
                ....*....|....*....|....*...
gi 24111764 241 RVLEEKGFRAAVIEAMTKCMEKSEKLSK 268
Cdd:COG0345 240 KVLEEGGLRAAVIEAVEAAAERSKELGK 267
proC TIGR00112
pyrroline-5-carboxylate reductase; This enzyme catalyzes the final step in proline ...
21-265 3.58e-113

pyrroline-5-carboxylate reductase; This enzyme catalyzes the final step in proline biosynthesis. Among the four paralogs in Bacillus subtilis (proG, proH, proI, and comER), ComER is the most divergent and does not prevent proline auxotrophy from mutation of the other three. It is excluded from the seed and scores between the trusted and noise cutoffs. [Amino acid biosynthesis, Glutamate family]


Pssm-ID: 272911 [Multi-domain]  Cd Length: 245  Bit Score: 325.37  E-value: 3.58e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764    21 LIASGQVLPGQIWVYTPSPDKVAALHDQFGINAAESAQEVAQIADIIFAAVKPGIMIKVLSEITSSLNKDSLVVSIAAGV 100
Cdd:TIGR00112   1 LLKAGALAPYDIYVINRSPEKLAALAKELGIVASSDAQEAVKEADVVFLAVKPQDLEEVLSELKSEKGKDKLLISIAAGV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764   101 TLDQLARALGHDRKIIRAMPNTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVIAEPMIHPVVGVSGSSPAYVF 180
Cdd:TIGR00112  81 TLEKLSQLLGGTRRVVRVMPNTPAKVGAGVTAIAANANVSEEDRALALALFKAVGSVVELPEALMDAVTALSGSGPAYVF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764   181 MFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLETGEHPGALKDMVCSPGGTTIEAVRVLEEKGFRAAVIEAMTKCM 260
Cdd:TIGR00112 161 LFIEALADAGVKQGLPRELALELAAQTVKGAAKLLEESGEHPALLKDQVTSPGGTTIAGLAVLEEKGVRGAVIEAIEAAV 240

                  ....*
gi 24111764   261 EKSEK 265
Cdd:TIGR00112 241 RRSRE 245
P5CR_dimer pfam14748
Pyrroline-5-carboxylate reductase dimerization; Pyrroline-5-carboxylate reductase consists of ...
162-265 2.02e-49

Pyrroline-5-carboxylate reductase dimerization; Pyrroline-5-carboxylate reductase consists of two domains, an N-terminal catalytic domain (pfam03807) and a C-terminal dimerization domain. This is the dimerization domain.


Pssm-ID: 464294 [Multi-domain]  Cd Length: 104  Bit Score: 158.33  E-value: 2.02e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764   162 EPMIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLETGEHPGALKDMVCSPGGTTIEAVR 241
Cdd:pfam14748   1 ESLMDAVTALSGSGPAYVFLFIEALADAGVAMGLPREEARELAAQTVLGAAKLLLTSGEHPAELRDKVTSPGGTTIAGLA 80
                          90       100
                  ....*....|....*....|....
gi 24111764   242 VLEEKGFRAAVIEAMTKCMEKSEK 265
Cdd:pfam14748  81 VLEEGGFRGAVIEAVEAATKRAKE 104
 
Name Accession Description Interval E-value
PRK11880 PRK11880
pyrroline-5-carboxylate reductase; Reviewed
1-269 6.87e-131

pyrroline-5-carboxylate reductase; Reviewed


Pssm-ID: 237008 [Multi-domain]  Cd Length: 267  Bit Score: 371.02  E-value: 6.87e-131
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764    1 MEKKIGFIGCGNMGKAILGGLIASGqVLPGQIWVYTPSPDKVAALHDQFGINAAESAQEVAQIADIIFAAVKPGIMIKVL 80
Cdd:PRK11880   1 MMKKIGFIGGGNMASAIIGGLLASG-VPAKDIIVSDPSPEKRAALAEEYGVRAATDNQEAAQEADVVVLAVKPQVMEEVL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764   81 SEITSSLNKdsLVVSIAAGVTLDQLARALGHDRKIIRAMPNTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVI 160
Cdd:PRK11880  80 SELKGQLDK--LVVSIAAGVTLARLERLLGADLPVVRAMPNTPALVGAGMTALTANALVSAEDRELVENLLSAFGKVVWV 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764  161 A-EPMIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLETGEHPGALKDMVCSPGGTTIEA 239
Cdd:PRK11880 158 DdEKQMDAVTAVSGSGPAYVFLFIEALADAGVKLGLPREQARKLAAQTVLGAAKLLLESGEHPAELRDNVTSPGGTTIAA 237
                        250       260       270
                 ....*....|....*....|....*....|
gi 24111764  240 VRVLEEKGFRAAVIEAMTKCMEKSEKLSKS 269
Cdd:PRK11880 238 LRVLEEKGLRAAVIEAVQAAAKRSKELGKE 267
ProC COG0345
Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]; ...
1-268 1.28e-130

Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]; Pyrroline-5-carboxylate reductase is part of the Pathway/BioSystem: Proline biosynthesis


Pssm-ID: 440114 [Multi-domain]  Cd Length: 267  Bit Score: 370.55  E-value: 1.28e-130
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764   1 MEKKIGFIGCGNMGKAILGGLIASGqVLPGQIWVYTPSPDKVAALHDQFGINAAESAQEVAQIADIIFAAVKPGIMIKVL 80
Cdd:COG0345   1 MSMKIGFIGAGNMGSAIIKGLLKSG-VPPEDIIVSDRSPERLEALAERYGVRVTTDNAEAAAQADVVVLAVKPQDLAEVL 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764  81 SEITSSLNKDSLVVSIAAGVTLDQLARALGHDRKIIRAMPNTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVI 160
Cdd:COG0345  80 EELAPLLDPDKLVISIAAGVTLATLEEALGGGAPVVRAMPNTPALVGEGVTALAAGEAVSEEDRELVEALFSAVGKVVWV 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764 161 AEPMIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLETGEHPGALKDMVCSPGGTTIEAV 240
Cdd:COG0345 160 DEELMDAVTALSGSGPAYVFLFIEAMADAGVALGLPRETARELAAQTVLGAAKLLLESGEHPAELRDRVTSPGGTTIAGL 239
                       250       260
                ....*....|....*....|....*...
gi 24111764 241 RVLEEKGFRAAVIEAMTKCMEKSEKLSK 268
Cdd:COG0345 240 KVLEEGGLRAAVIEAVEAAAERSKELGK 267
proC TIGR00112
pyrroline-5-carboxylate reductase; This enzyme catalyzes the final step in proline ...
21-265 3.58e-113

pyrroline-5-carboxylate reductase; This enzyme catalyzes the final step in proline biosynthesis. Among the four paralogs in Bacillus subtilis (proG, proH, proI, and comER), ComER is the most divergent and does not prevent proline auxotrophy from mutation of the other three. It is excluded from the seed and scores between the trusted and noise cutoffs. [Amino acid biosynthesis, Glutamate family]


Pssm-ID: 272911 [Multi-domain]  Cd Length: 245  Bit Score: 325.37  E-value: 3.58e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764    21 LIASGQVLPGQIWVYTPSPDKVAALHDQFGINAAESAQEVAQIADIIFAAVKPGIMIKVLSEITSSLNKDSLVVSIAAGV 100
Cdd:TIGR00112   1 LLKAGALAPYDIYVINRSPEKLAALAKELGIVASSDAQEAVKEADVVFLAVKPQDLEEVLSELKSEKGKDKLLISIAAGV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764   101 TLDQLARALGHDRKIIRAMPNTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVIAEPMIHPVVGVSGSSPAYVF 180
Cdd:TIGR00112  81 TLEKLSQLLGGTRRVVRVMPNTPAKVGAGVTAIAANANVSEEDRALALALFKAVGSVVELPEALMDAVTALSGSGPAYVF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764   181 MFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLETGEHPGALKDMVCSPGGTTIEAVRVLEEKGFRAAVIEAMTKCM 260
Cdd:TIGR00112 161 LFIEALADAGVKQGLPRELALELAAQTVKGAAKLLEESGEHPALLKDQVTSPGGTTIAGLAVLEEKGVRGAVIEAIEAAV 240

                  ....*
gi 24111764   261 EKSEK 265
Cdd:TIGR00112 241 RRSRE 245
PLN02688 PLN02688
pyrroline-5-carboxylate reductase
3-269 1.53e-99

pyrroline-5-carboxylate reductase


Pssm-ID: 178291 [Multi-domain]  Cd Length: 266  Bit Score: 291.86  E-value: 1.53e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764    3 KKIGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSPDKVAALHDQFGINAAESAQEVAQIADIIFAAVKPGIMIKVLSE 82
Cdd:PLN02688   1 FRVGFIGAGKMAEAIARGLVASGVVPPSRISTADDSNPARRDVFQSLGVKTAASNTEVVKSSDVIILAVKPQVVKDVLTE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764   83 ITSSLNKDSLVVSIAAGVTLDQLARALGHDRkIIRAMPNTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVIAE 162
Cdd:PLN02688  81 LRPLLSKDKLLVSVAAGITLADLQEWAGGRR-VVRVMPNTPCLVGEAASVMSLGPAATADDRDLVATLFGAVGKIWVVDE 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764  163 PMIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLETGEHPGALKDMVCSPGGTTIEAVRV 242
Cdd:PLN02688 160 KLLDAVTGLSGSGPAYIFLAIEALADGGVAAGLPRDVALSLAAQTVLGAAKMVLETGKHPGQLKDMVTSPGGTTIAGVHE 239
                        250       260
                 ....*....|....*....|....*..
gi 24111764  243 LEEKGFRAAVIEAMTKCMEKSEKLSKS 269
Cdd:PLN02688 240 LEKGGFRAALMNAVVAAAKRSRELSKS 266
PRK07679 PRK07679
pyrroline-5-carboxylate reductase; Reviewed
2-269 5.42e-53

pyrroline-5-carboxylate reductase; Reviewed


Pssm-ID: 181079 [Multi-domain]  Cd Length: 279  Bit Score: 173.42  E-value: 5.42e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764    2 EKKIGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSPDK-VAALHDQFGINAAESAQEVAQIADIIFAAVKPGIMIKVL 80
Cdd:PRK07679   3 IQNISFLGAGSIAEAIIGGLLHANVVKGEQITVSNRSNETrLQELHQKYGVKGTHNKKELLTDANILFLAMKPKDVAEAL 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764   81 SEITSSLNKDSLVVSIAAGVTLDQLARALGHDRKIIRAMPNTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVI 160
Cdd:PRK07679  83 IPFKEYIHNNQLIISLLAGVSTHSIRNLLQKDVPIIRAMPNTSAAILKSATAISPSKHATAEHIQTAKALFETIGLVSVV 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764  161 AEPMIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLETGEHPGALKDMVCSPGGTTIEAV 240
Cdd:PRK07679 163 EEEDMHAVTALSGSGPAYIYYVVEAMEKAAKKIGLKEDVAKSLILQTMIGAAEMLKASEKHPSILRKEITSPGGTTEAGI 242
                        250       260
                 ....*....|....*....|....*....
gi 24111764  241 RVLEEKGFRAAVIEAMTKCMEKSEKLSKS 269
Cdd:PRK07679 243 EVLQEHRFQQALISCITQATQRSHNLGKT 271
PTZ00431 PTZ00431
pyrroline carboxylate reductase; Provisional
1-266 6.24e-52

pyrroline carboxylate reductase; Provisional


Pssm-ID: 173621 [Multi-domain]  Cd Length: 260  Bit Score: 170.13  E-value: 6.24e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764    1 MEK-KIGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSPDKVAalhdqfgINAAESAQEVAQIADIIFAAVKPGIMIKV 79
Cdd:PTZ00431   1 MENiRVGFIGLGKMGSALAYGIENSNIIGKENIYYHTPSKKNTP-------FVYLQSNEELAKTCDIIVLAVKPDLAGKV 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764   80 LSEITSSLNKdSLVVSIAAGVTLDQLARALGHDRKIIRAMPNTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEV 159
Cdd:PTZ00431  74 LLEIKPYLGS-KLLISICGGLNLKTLEEMVGVEAKIVRVMPNTPSLVGQGSLVFCANNNVDSTDKKKVIDIFSACGIIQE 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764  160 IAEPMIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLETGEHPGALKDMVCSPGGTTIEA 239
Cdd:PTZ00431 153 IKEKDMDIATAISGCGPAYVFLFIESLIDAGVKNGLNRDVSKNLVLQTILGSVHMVKASDQPVQQLKDDVCSPGGITIVG 232
                        250       260
                 ....*....|....*....|....*..
gi 24111764  240 VRVLEEKGFRAAVIEAMTKCMEKSEKL 266
Cdd:PTZ00431 233 LYTLEKHAFKYTVMDAVESACQKSKSM 259
P5CR_dimer pfam14748
Pyrroline-5-carboxylate reductase dimerization; Pyrroline-5-carboxylate reductase consists of ...
162-265 2.02e-49

Pyrroline-5-carboxylate reductase dimerization; Pyrroline-5-carboxylate reductase consists of two domains, an N-terminal catalytic domain (pfam03807) and a C-terminal dimerization domain. This is the dimerization domain.


Pssm-ID: 464294 [Multi-domain]  Cd Length: 104  Bit Score: 158.33  E-value: 2.02e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764   162 EPMIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLETGEHPGALKDMVCSPGGTTIEAVR 241
Cdd:pfam14748   1 ESLMDAVTALSGSGPAYVFLFIEALADAGVAMGLPREEARELAAQTVLGAAKLLLTSGEHPAELRDKVTSPGGTTIAGLA 80
                          90       100
                  ....*....|....*....|....
gi 24111764   242 VLEEKGFRAAVIEAMTKCMEKSEK 265
Cdd:pfam14748  81 VLEEGGFRGAVIEAVEAATKRAKE 104
PRK07680 PRK07680
late competence protein ComER; Validated
4-245 1.47e-36

late competence protein ComER; Validated


Pssm-ID: 181080 [Multi-domain]  Cd Length: 273  Bit Score: 130.86  E-value: 1.47e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764    4 KIGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSPDKVAALHDQF-GINAAESAQEVAQIADIIFAAVKPGIMIKVLSE 82
Cdd:PRK07680   2 NIGFIGTGNMGTILIEAFLESGAVKPSQLTITNRTPAKAYHIKERYpGIHVAKTIEEVISQSDLIFICVKPLDIYPLLQK 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764   83 ITSSLNKDSLVVSIAAGVTLDQLARALghDRKIIRAMPNTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVIAE 162
Cdd:PRK07680  82 LAPHLTDEHCLVSITSPISVEQLETLV--PCQVARIIPSITNRALSGASLFTFGSRCSEEDQQKLERLFSNISTPLVIEE 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764  163 PMIHPVVGVSGSSPAYVFMFIEAMADAAV-LGGMPRAQAYKFAAQAVMGSAKMVLETGEHPGALKDMVCSPGGTTIEAVR 241
Cdd:PRK07680 160 DITRVSSDIVSCGPAFFSYLLQRFIDAAVeETNISKEEATTLASEMLIGMGKLLEKGLYTLPTLQEKVCVKGGITGEGIK 239

                 ....
gi 24111764  242 VLEE 245
Cdd:PRK07680 240 VLEE 243
PRK06928 PRK06928
pyrroline-5-carboxylate reductase; Reviewed
1-245 7.99e-28

pyrroline-5-carboxylate reductase; Reviewed


Pssm-ID: 235888 [Multi-domain]  Cd Length: 277  Bit Score: 107.93  E-value: 7.99e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764    1 MEKkIGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSP-DKVAALHDQF-GINAAESAQEVAQIADIIFAAVKPGIMIK 78
Cdd:PRK06928   1 MEK-IGFIGYGSMADMIATKLLETEVATPEEIILYSSSKnEHFNQLYDKYpTVELADNEAEIFTKCDHSFICVPPLAVLP 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764   79 VLSEITSSLNKDSLVVSIAAGVTLDQLARAlGHDRKIIRAMPNTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAE 158
Cdd:PRK06928  80 LLKDCAPVLTPDRHVVSIAAGVSLDDLLEI-TPGLQVSRLIPSLTSAVGVGTSLVAHAETVNEANKSRLEETLSHFSHVM 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764  159 VIAEPMIHPVVGVSGSSPAYVFMFIEAMADAAVL-GGMPRAQAYKFAAQAVMGSAKMVLETGEHPGALKDMVCSPGGTTI 237
Cdd:PRK06928 159 TIREENMDIASNLTSSSPGFIAAIFEEFAEAAVRnSSLSDEEAFQFLNFALAGTGKLLVEEDYTFSGTIERVATKGGITA 238

                 ....*...
gi 24111764  238 EAVRVLEE 245
Cdd:PRK06928 239 EGAEVIQA 246
F420_oxidored pfam03807
NADP oxidoreductase coenzyme F420-dependent;
6-99 1.68e-21

NADP oxidoreductase coenzyme F420-dependent;


Pssm-ID: 397743 [Multi-domain]  Cd Length: 92  Bit Score: 85.75  E-value: 1.68e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764     6 GFIGCGNMGKAILGGLIASGqvlPGQIWV-YTPSPDKVAALHDQFGINA-AESAQEVAQIADIIFAAVKPGIMIKVLSEI 83
Cdd:pfam03807   1 GFIGAGNMGEALARGLVAAG---PHEVVVaNSRNPEKAEELAEEYGVGAtAVDNEEAAEEADVVFLAVKPEDAPDVLSEL 77
                          90
                  ....*....|....*.
gi 24111764    84 TSSLnKDSLVVSIAAG 99
Cdd:pfam03807  78 SDLL-KGKIVISIAAG 92
PRK06476 PRK06476
pyrroline-5-carboxylate reductase; Reviewed
4-262 4.10e-20

pyrroline-5-carboxylate reductase; Reviewed


Pssm-ID: 235812 [Multi-domain]  Cd Length: 258  Bit Score: 86.61  E-value: 4.10e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764    4 KIGFIGCGNMGKAILGGLIASGqVLPGQIWVYTPSPDKVAALHDQFG-INAAESAQEVAQIADIIFAAVKPGIMIKVLSE 82
Cdd:PRK06476   2 KIGFIGTGAITEAMVTGLLTSP-ADVSEIIVSPRNAQIAARLAERFPkVRIAKDNQAVVDRSDVVFLAVRPQIAEEVLRA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764   83 ItsSLNKDSLVVSIAAGVTLDQLARALGHDRKIIRAMPNTPALVNAGMTSVTPnalvtpeDTADVLNIFRCFGEAEVIAE 162
Cdd:PRK06476  81 L--RFRPGQTVISVIAATDRAALLEWIGHDVKLVRAIPLPFVAERKGVTAIYP-------PDPFVAALFDALGTAVECDS 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764  163 PMIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMG-SAKMVLETGEHPGALKDMVCSPGGTTIEAVR 241
Cdd:PRK06476 152 EEEYDLLAAASALMATYFGILETATGWLEEQGLKRQKARAYLAPLFASlAQDAVRSTKTDFSALSREFSTKGGLNEQVLN 231
                        250       260
                 ....*....|....*....|.
gi 24111764  242 VLEEKGFRAAVIEAMTKCMEK 262
Cdd:PRK06476 232 DFSRQGGYAALTDALDRVLRR 252
MmsB COG2084
3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase [Lipid transport ...
3-228 1.97e-09

3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase [Lipid transport and metabolism];


Pssm-ID: 441687 [Multi-domain]  Cd Length: 285  Bit Score: 57.05  E-value: 1.97e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764   3 KKIGFIGCGNMGKAILGGLIASGQvlpgQIWVYTPSPDKVAALHDQfGINAAESAQEVAQIADIIFAAVK-PGIMIKVL- 80
Cdd:COG2084   2 MKVGFIGLGAMGAPMARNLLKAGH----EVTVWNRTPAKAEALVAA-GARVAASPAEAAAAADVVITMLPdDAAVEEVLl 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764  81 --SEITSSLNKDSLVV---SIAAGVTLDQLARALGHDRKIIRAmP--NTPALVNAGMTSVtpnaLV--TPEDTADVLNIF 151
Cdd:COG2084  77 geDGLLAALRPGAVVVdmsTISPETARELAAAAAARGVRYLDA-PvsGGPAGAEAGTLTI----MVggDEAAFERARPVL 151
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764 152 RCFGEAeviaepMIHpvVGVSGSSPAY-------VFMFIEAMADAAVLG---GMPRAQAYKFAAQAVMGS------AKMV 215
Cdd:COG2084 152 EAMGKR------IVH--VGDAGAGQAAklannllLAGTMAALAEALALAekaGLDPETLLEVLSGGAAGSwvlenrGPRM 223
                       250
                ....*....|....*...
gi 24111764 216 LETGEHPG-----ALKDM 228
Cdd:COG2084 224 LAGDFDPGfaldlMLKDL 241
NAD_binding_2 pfam03446
NAD binding domain of 6-phosphogluconate dehydrogenase; The NAD binding domain of ...
4-72 6.98e-08

NAD binding domain of 6-phosphogluconate dehydrogenase; The NAD binding domain of 6-phosphogluconate dehydrogenase adopts a Rossmann fold.


Pssm-ID: 427298 [Multi-domain]  Cd Length: 159  Bit Score: 50.93  E-value: 6.98e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 24111764     4 KIGFIGCGNMGKAILGGLIASGQvlpgQIWVYTPSPDKVAALHDQfGINAAESAQEVAQIADIIFAAVK 72
Cdd:pfam03446   1 KIGFIGLGVMGSPMALNLLKAGY----TVTVYNRTPEKVEELVAA-GAIAAASPAEFVAGLDVVITMVP 64
garR PRK11559
tartronate semialdehyde reductase; Provisional
1-68 2.80e-06

tartronate semialdehyde reductase; Provisional


Pssm-ID: 183197 [Multi-domain]  Cd Length: 296  Bit Score: 47.74  E-value: 2.80e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 24111764    1 MEKKIGFIGCGNMGKAILGGLIASGQVLPgqiwVYTPSPDKVAALhDQFGINAAESAQEVAQIADIIF 68
Cdd:PRK11559   1 MTMKVGFIGLGIMGKPMSKNLLKAGYSLV----VYDRNPEAVAEV-IAAGAETASTAKAVAEQCDVII 63
COG5495 COG5495
Predicted oxidoreductase, contains short-chain dehydrogenase (SDR) and DUF2520 domains ...
1-108 5.58e-06

Predicted oxidoreductase, contains short-chain dehydrogenase (SDR) and DUF2520 domains [General function prediction only];


Pssm-ID: 444246 [Multi-domain]  Cd Length: 286  Bit Score: 46.73  E-value: 5.58e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764   1 MEKKIGFIGCGNMGKAILGGLIASGQVLPGqiwVYTPSPDKVAALHDQFGINAAESAQEVAQIADIIFAAVKPGIMIKVL 80
Cdd:COG5495   2 ARMKIGIIGAGRVGTALAAALRAAGHEVVG---VYSRSPASAERAAALLGAVPALDLEELAAEADLVLLAVPDDAIAEVA 78
                        90       100       110
                ....*....|....*....|....*....|
gi 24111764  81 SEI--TSSLNKDSLVVSIAAGVTLDQLARA 108
Cdd:COG5495  79 AGLaaAGALRPGQLVVHTSGALGSDVLAPA 108
MviM COG0673
Predicted dehydrogenase [General function prediction only];
1-66 1.19e-04

Predicted dehydrogenase [General function prediction only];


Pssm-ID: 440437 [Multi-domain]  Cd Length: 295  Bit Score: 42.60  E-value: 1.19e-04
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 24111764   1 MEK-KIGFIGCGNMGKAILGGLIASGQV-LPGqiwVYTPSPDKVAALHDQFGINAAESAQEVAQIADI 66
Cdd:COG0673   1 MDKlRVGIIGAGGIGRAHAPALAALPGVeLVA---VADRDPERAEAFAEEYGVRVYTDYEELLADPDI 65
PRK15461 PRK15461
sulfolactaldehyde 3-reductase;
4-97 1.13e-03

sulfolactaldehyde 3-reductase;


Pssm-ID: 185358 [Multi-domain]  Cd Length: 296  Bit Score: 39.84  E-value: 1.13e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24111764    4 KIGFIGCGNMGKAILGGLIASGQvlpgQIWVYTPSPDKVAALHDQfGINAAESAQEVAQIADIIFAAVKPGIMIKVLSE- 82
Cdd:PRK15461   3 AIAFIGLGQMGSPMASNLLKQGH----QLQVFDVNPQAVDALVDK-GATPAASPAQAAAGAEFVITMLPNGDLVRSVLFg 77
                         90
                 ....*....|....*...
gi 24111764   83 ---ITSSLNKDSLVVSIA 97
Cdd:PRK15461  78 engVCEGLSRDALVIDMS 95
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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