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Conserved domains on  [gi|19913375|ref|NP_612116|]
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megakaryocyte and platelet inhibitory receptor G6b isoform G6b-B precursor [Homo sapiens]

Protein Classification

G6B domain-containing protein( domain architecture ID 10633427)

G6B domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
G6B pfam15096
G6B family;
18-241 3.76e-138

G6B family;


:

Pssm-ID: 464500  Cd Length: 224  Bit Score: 386.96  E-value: 3.76e-138
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19913375    18 NPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGRRPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELL 97
Cdd:pfam15096   1 DPGASLDGRPGDRVNLSCIGVSHPIRWVWAPSFPACKGLSKGRRPILWASSSGTPTVPPAQPFAGRLRALDPGIRRLELL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19913375    98 LSAGDSGTFFCKGRHEDESRTVLHVLGDRTYCKAPGPTHGSVYPQLLIPLLGAGLVLGLGALGLVWWLHRRLPPQPIRPL 177
Cdd:pfam15096  81 LSAGDSGTFFCKGRQEEESRTVLHVLGDRADCKASGPTHGSVYSQLLIPLLGAGLVLGLGALGLAWWRRRRSPPHPPRPL 160
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 19913375   178 PRFAPLVKTEPQRPVKEEEPKIPGDLDQEPSLLYADLDHLALSRPRRLSTADPADASTIYAVVV 241
Cdd:pfam15096 161 PRFAPLVKAEPQRPVKEEEPKIPGDLDQEPSLLYADLDHSALRRPRRLSPVVPADASTIYAVVV 224
 
Name Accession Description Interval E-value
G6B pfam15096
G6B family;
18-241 3.76e-138

G6B family;


Pssm-ID: 464500  Cd Length: 224  Bit Score: 386.96  E-value: 3.76e-138
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19913375    18 NPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGRRPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELL 97
Cdd:pfam15096   1 DPGASLDGRPGDRVNLSCIGVSHPIRWVWAPSFPACKGLSKGRRPILWASSSGTPTVPPAQPFAGRLRALDPGIRRLELL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19913375    98 LSAGDSGTFFCKGRHEDESRTVLHVLGDRTYCKAPGPTHGSVYPQLLIPLLGAGLVLGLGALGLVWWLHRRLPPQPIRPL 177
Cdd:pfam15096  81 LSAGDSGTFFCKGRQEEESRTVLHVLGDRADCKASGPTHGSVYSQLLIPLLGAGLVLGLGALGLAWWRRRRSPPHPPRPL 160
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 19913375   178 PRFAPLVKTEPQRPVKEEEPKIPGDLDQEPSLLYADLDHLALSRPRRLSTADPADASTIYAVVV 241
Cdd:pfam15096 161 PRFAPLVKAEPQRPVKEEEPKIPGDLDQEPSLLYADLDHSALRRPRRLSPVVPADASTIYAVVV 224
 
Name Accession Description Interval E-value
G6B pfam15096
G6B family;
18-241 3.76e-138

G6B family;


Pssm-ID: 464500  Cd Length: 224  Bit Score: 386.96  E-value: 3.76e-138
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19913375    18 NPGASLDGRPGDRVNLSCGGVSHPIRWVWAPSFPACKGLSKGRRPILWASSSGTPTVPPLQPFVGRLRSLDSGIRRLELL 97
Cdd:pfam15096   1 DPGASLDGRPGDRVNLSCIGVSHPIRWVWAPSFPACKGLSKGRRPILWASSSGTPTVPPAQPFAGRLRALDPGIRRLELL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 19913375    98 LSAGDSGTFFCKGRHEDESRTVLHVLGDRTYCKAPGPTHGSVYPQLLIPLLGAGLVLGLGALGLVWWLHRRLPPQPIRPL 177
Cdd:pfam15096  81 LSAGDSGTFFCKGRQEEESRTVLHVLGDRADCKASGPTHGSVYSQLLIPLLGAGLVLGLGALGLAWWRRRRSPPHPPRPL 160
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 19913375   178 PRFAPLVKTEPQRPVKEEEPKIPGDLDQEPSLLYADLDHLALSRPRRLSTADPADASTIYAVVV 241
Cdd:pfam15096 161 PRFAPLVKAEPQRPVKEEEPKIPGDLDQEPSLLYADLDHSALRRPRRLSPVVPADASTIYAVVV 224
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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