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Conserved domains on  [gi|14193046|ref|NP_115836|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Iguana iguana]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009570)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 1-321 0e+00

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 214422  Cd Length: 323  Bit Score: 611.90  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046    1 MPNLLNHIINPLTYIIPILVAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPVRPSSASPTLFILTP 80
Cdd:MTH00111   1 MPTLLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046   81 TLALFIALSIWTPLPMPMMLADMNLGLLFMLALSSTAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLGIILLSIVI 160
Cdd:MTH00111  81 ILALLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLIL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046  161 LSGGFSLKTLTITQEPAWLLLSSWPLTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMN 240
Cdd:MTH00111 161 LSGGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMN 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046  241 TLSATLFLSPGQTQ--PELFSMNLMTKATLLTIIFLWVRASYPRFRYDQLMHLLWKQFLPITLALCLWHTSLPISTFALP 318
Cdd:MTH00111 241 TLTTILFLNPSTLNlpPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLP 320


                 ...
gi 14193046  319 PIN 321
Cdd:MTH00111 321 PQL 323
 
Name Accession Description Interval E-value
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 1-321 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 611.90  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046    1 MPNLLNHIINPLTYIIPILVAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPVRPSSASPTLFILTP 80
Cdd:MTH00111   1 MPTLLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046   81 TLALFIALSIWTPLPMPMMLADMNLGLLFMLALSSTAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLGIILLSIVI 160
Cdd:MTH00111  81 ILALLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLIL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046  161 LSGGFSLKTLTITQEPAWLLLSSWPLTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMN 240
Cdd:MTH00111 161 LSGGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMN 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046  241 TLSATLFLSPGQTQ--PELFSMNLMTKATLLTIIFLWVRASYPRFRYDQLMHLLWKQFLPITLALCLWHTSLPISTFALP 318
Cdd:MTH00111 241 TLTTILFLNPSTLNlpPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLP 320


                 ...
gi 14193046  319 PIN 321
Cdd:MTH00111 321 PQL 323
NADHdh pfam00146
NADH dehydrogenase;
12-306 6.58e-119

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 344.46  E-value: 6.58e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046    12 LTYIIPILVAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPVRPSSASPTLFILTPTLALFIALSIW 91
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046    92 TPLPM--PMMLADMNLGLLFMLALSSTAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLGIILLSIVILSGGFSLKT 169
Cdd:pfam00146  83 AVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046   170 LTITQEPAWLLLSSWPLTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMNTLSATLFL- 248
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLg 242

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 14193046   249 ---SPGQTQPELFsmnLMTKATLLTIIFLWVRASYPRFRYDQLMHLLWKQFLPITLALCLW 306
Cdd:pfam00146 243 gwlGPFPLPGLLW---FLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 3-302 7.34e-109

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 319.77  E-value: 7.34e-109
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046   3 NLLNHIINPLTYIIPILVAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPVRPSSASPTLFILTPTL 82
Cdd:COG1005   7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046  83 ALFIALSIWTPLPM--PMMLADMNLGLLFMLALSSTAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLGIILLSIVI 160
Cdd:COG1005  87 AFIPALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046 161 LSGGFSLKTLTITQE-PAWLLLSSWPLTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMM 239
Cdd:COG1005 167 LAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046 240 NTLSATLFL----SPGQTQPELFSMN---LMTKATLLTIIFLWVRASYPRFRYDQLMHLLWKQFLPITLA 302
Cdd:COG1005 247 SALATTLFLggwlGPFPILPLGGLPGilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
 
Name Accession Description Interval E-value
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 1-321 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 611.90  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046    1 MPNLLNHIINPLTYIIPILVAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPVRPSSASPTLFILTP 80
Cdd:MTH00111   1 MPTLLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046   81 TLALFIALSIWTPLPMPMMLADMNLGLLFMLALSSTAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLGIILLSIVI 160
Cdd:MTH00111  81 ILALLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLIL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046  161 LSGGFSLKTLTITQEPAWLLLSSWPLTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMN 240
Cdd:MTH00111 161 LSGGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMN 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046  241 TLSATLFLSPGQTQ--PELFSMNLMTKATLLTIIFLWVRASYPRFRYDQLMHLLWKQFLPITLALCLWHTSLPISTFALP 318
Cdd:MTH00111 241 TLTTILFLNPSTLNlpPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLP 320


                 ...
gi 14193046  319 PIN 321
Cdd:MTH00111 321 PQL 323
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 1-319 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 551.52  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046    1 MPNLLNHIINPLTYIIPILVAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPVRPSSASPTLFILTP 80
Cdd:MTH00134   2 LSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATP 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046   81 TLALFIALSIWTPLPMPMMLADMNLGLLFMLALSSTAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLGIILLSIVI 160
Cdd:MTH00134  82 MLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVII 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046  161 LSGGFSLKTLTITQEPAWLLLSSWPLTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMN 240
Cdd:MTH00134 162 FTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMN 241

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046  241 TLSATLFL--SPGQTQPELFSMNLMTKATLLTIIFLWVRASYPRFRYDQLMHLLWKQFLPITLALCLWHTSLPISTFALP 318
Cdd:MTH00134 242 TLSAILFLgaSHIPTLPELTTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGLP 321


                 .
gi 14193046  319 P 319
Cdd:MTH00134 322 P 322
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 1-319 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 545.76  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046    1 MPNLLNHIINPLTYIIPILVAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPVRPSSASPTLFILTP 80
Cdd:MTH00071   1 MMTLISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046   81 TLALFIALSIWTPLPMPMMLADMNLGLLFMLALSSTAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLGIILLSIVI 160
Cdd:MTH00071  81 TMALTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLIL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046  161 LSGGFSLKTLTITQEPAWLLLSSWPLTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMN 240
Cdd:MTH00071 161 LTGGFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMN 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046  241 TLSATLFLSPGQ--TQPELFSMNLMTKATLLTIIFLWVRASYPRFRYDQLMHLLWKQFLPITLALCLWHTSLPISTFALP 318
Cdd:MTH00071 241 TLSTILFLGSTYnhLQPELSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIP 320


                 .
gi 14193046  319 P 319
Cdd:MTH00071 321 P 321
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 7-319 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 524.57  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046    7 HIINPLTYIIPILVAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPVRPSSASPTLFILTPTLALFI 86
Cdd:MTH00104   2 FMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046   87 ALSIWTPLPMPMMLADMNLGLLFMLALSSTAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLGIILLSIVILSGGFS 166
Cdd:MTH00104  82 ALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFT 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046  167 LKTLTITQEPAWLLLSSWPLTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMNTLSATL 246
Cdd:MTH00104 162 LSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTIL 241

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 14193046  247 FLSP--GQTQPELFSMNLMTKATLLTIIFLWVRASYPRFRYDQLMHLLWKQFLPITLALCLWHTSLPISTFALPP 319
Cdd:MTH00104 242 FLGAfhNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPP 316
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 4-319 3.51e-157

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 441.66  E-value: 3.51e-157
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046    4 LLNHIINPLTYIIPILVAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPVRPSSASPTLFILTPTLA 83
Cdd:MTH00218   1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046   84 LFIALSIWTPLPMPMMLADMNLGLLFMLALSSTAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLGIILLSIVILSG 163
Cdd:MTH00218  81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046  164 GFSLKTLTITQEPAWLLLSSWPLTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMNTLS 243
Cdd:MTH00218 161 GFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLS 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 14193046  244 ATLFLSPGQTqpelfSMNLMTKATLLTIIFLWVRASYPRFRYDQLMHLLWKQFLPITLALCLWHTSLPISTFALPP 319
Cdd:MTH00218 241 VILFLGTSLT-----TINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASLPP 311
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 8-319 3.93e-153

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 432.09  E-value: 3.93e-153
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046    8 IINPLTYIIPILVAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPVRPSSASPTLFILTPTLALFIA 87
Cdd:MTH00040   7 LINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLA 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046   88 LSIWTPLPMPMMLADMNLGLLFMLALSSTAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLGIILLSIVILSGGFSL 167
Cdd:MTH00040  87 LLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSL 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046  168 KTLTITQEPAWLLLSSWPLTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMNTLSATLF 247
Cdd:MTH00040 167 SSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILF 246

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 14193046  248 LSPGQTQPELFSMNLMT---KATLLTIIFLWVRASYPRFRYDQLMHLLWKQFLPITLALCLWHTSLPISTFALPP 319
Cdd:MTH00040 247 LGGGSPFNEIFPINIIIvgiKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILPP 321
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 5-303 3.14e-123

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 355.33  E-value: 3.14e-123
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046    5 LNHIINPLTYIIPILVAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPVRPSSASPTLFILTPTLAL 84
Cdd:MTH00143   1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046   85 FIALSIWTPLPMPMMLADMNLGLLFMLALSSTAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLGIILLSIVILSGG 164
Cdd:MTH00143  81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046  165 FSLKTLTITQEPAWLLLSSWPLTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMNTLSA 244
Cdd:MTH00143 161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 14193046  245 TLFLSPGQTQPELFSMNLMTKATLLTIIFLWVRASYPRFRYDQLMHLLWKQFLPITLAL 303
Cdd:MTH00143 241 VLFFGGSSVLFLLGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSI 299
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 8-313 7.04e-122

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 352.12  E-value: 7.04e-122
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046    8 IINPLTYIIPILVAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPVRPSSASPTLFILTPTLALFIA 87
Cdd:MTH00195   5 VIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALA 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046   88 LSIWTPLPMPMMLADMNLGLLFMLALSSTAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLGIILLSIVILSGGFSL 167
Cdd:MTH00195  85 LILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDF 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046  168 KTLTITQEPAWLLLSSWPLTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMNTLSATLF 247
Cdd:MTH00195 165 TIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILF 244

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 14193046  248 LSPGQTqpelfsMNLMTKATLLTIIFLWVRASYPRFRYDQLMHLLWKQFLPITLALCLWHTSLPIS 313
Cdd:MTH00195 245 LGGGGT------IIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFA 304
NADHdh pfam00146
NADH dehydrogenase;
12-306 6.58e-119

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 344.46  E-value: 6.58e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046    12 LTYIIPILVAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPVRPSSASPTLFILTPTLALFIALSIW 91
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046    92 TPLPM--PMMLADMNLGLLFMLALSSTAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLGIILLSIVILSGGFSLKT 169
Cdd:pfam00146  83 AVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046   170 LTITQEPAWLLLSSWPLTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMNTLSATLFL- 248
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLg 242

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 14193046   249 ---SPGQTQPELFsmnLMTKATLLTIIFLWVRASYPRFRYDQLMHLLWKQFLPITLALCLW 306
Cdd:pfam00146 243 gwlGPFPLPGLLW---FLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 8-312 2.37e-118

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 342.90  E-value: 2.37e-118
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046    8 IINPLTYIIPILVAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPVRPSSASPTLFILTPTLALFIA 87
Cdd:MTH00193   5 LINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLS 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046   88 LSIWTPLPMPMMLADMNLGLLFMLALSSTAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLGIILLSIVILSGGFSL 167
Cdd:MTH00193  85 LLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNL 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046  168 KTLTITQEPAWLLLSSWPLTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMNTLSATLF 247
Cdd:MTH00193 165 LDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMF 244

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 14193046  248 LSpgqtqPELFSMNLMTKATLLTIIFLWVRASYPRFRYDQLMHLLWKQFLPITLALCLWHTSLPI 312
Cdd:MTH00193 245 LG-----GDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKI 304
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 8-310 4.36e-110

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 321.98  E-value: 4.36e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046    8 IINPLTYIIPILVAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPVRPSSASPTLFILTPTLALFIA 87
Cdd:MTH00225   4 LLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILS 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046   88 LSIWTPLPMPMMLADMNLGLLFMLALSSTAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLGIILLSIVILSGGFSL 167
Cdd:MTH00225  84 LILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYNL 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046  168 KTLTITQEPAWLLLSSWPLTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMNTLSATLF 247
Cdd:MTH00225 164 FDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSILF 243

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 14193046  248 LSPGQtqpELFSMNLMTKATLLTIIFLWVRASYPRFRYDQLMHLLWKQFLPITLALCLWHTSL 310
Cdd:MTH00225 244 FGGFF---VTIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLII 303
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 3-302 7.34e-109

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 319.77  E-value: 7.34e-109
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046   3 NLLNHIINPLTYIIPILVAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPVRPSSASPTLFILTPTL 82
Cdd:COG1005   7 PLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPIL 86

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046  83 ALFIALSIWTPLPM--PMMLADMNLGLLFMLALSSTAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLGIILLSIVI 160
Cdd:COG1005  87 AFIPALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVL 166

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046 161 LSGGFSLKTLTITQE-PAWLLLSSWPLTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMM 239
Cdd:COG1005 167 LAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLV 246

                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046 240 NTLSATLFL----SPGQTQPELFSMN---LMTKATLLTIIFLWVRASYPRFRYDQLMHLLWKQFLPITLA 302
Cdd:COG1005 247 SALATTLFLggwlGPFPILPLGGLPGilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLV 316
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 8-320 5.36e-108

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 317.44  E-value: 5.36e-108
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046    8 IINPLTYIIPILVAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPVRPSSASPTLFILTPTLALFIA 87
Cdd:MTH00054   5 IIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLA 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046   88 LSIWTPLPM--PMMLADMNLGLLFMLALSSTAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLGIILLSIVILSGGF 165
Cdd:MTH00054  85 FIAWGVIPYgeGVVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSL 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046  166 SLKTLTITQEPAWLLLSSWPLTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMNTLSAT 245
Cdd:MTH00054 165 NLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVI 244

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046  246 LFLS-----PGQTQPELFSMNLMTKATLLTIIFLWVRASYPRFRYDQLMHLLWKQFLPITLALCLWHTSLPISTFALPPI 320
Cdd:MTH00054 245 LFLGgwlviSGPTSYFSNFVWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGFNALPPF 324
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 8-320 1.68e-107

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 316.29  E-value: 1.68e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046    8 IINPLTYIIPILVAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPVRPSSASPTLFILTPTLALFIA 87
Cdd:MTH00216   9 LIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLA 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046   88 LSIWTPLPMP--MMLADMNLGLLFMLALSSTAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLGIILLSIVILSGGF 165
Cdd:MTH00216  89 LIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSL 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046  166 SLKTLTITQEPA-WLLLSSWPLTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMNTLSA 244
Cdd:MTH00216 169 SITEIVLAQNNGiWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTT 248

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 14193046  245 TLFLSPGQTQPELFSMN---LMTKATLLTIIFLWVRASYPRFRYDQLMHLLWKQFLPITLALCLWHTSLPISTFALPPI 320
Cdd:MTH00216 249 ILFLGGWLSPIKYFKGGagwFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFGFNGPPPI 327
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
1-306 4.99e-102

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 302.11  E-value: 4.99e-102
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046    1 MPNLLNHIINPLTYIIPILVAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPVRPSSASPTLFILTP 80
Cdd:PRK06076   6 PDLLLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAP 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046   81 TLALFIALSIWTPLPM--PMMLADMNLGLLFMLALSSTAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLGIILLSI 158
Cdd:PRK06076  86 VIAFIPAFLAWAVIPFgpELVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAV 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046  159 VILSGGFSLKTLTITQEPAWLLLSSWPLTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMM 238
Cdd:PRK06076 166 VLLAGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMIL 245

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 14193046  239 MNTLSATLFL------SPGQTQPELFSMnLMTKATLLTIIFLWVRASYPRFRYDQLMHLLWKQFLPITLALCLW 306
Cdd:PRK06076 246 VSALITTLFLggwlppFPLGGGIPGAIW-FVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLL 318
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 9-319 1.15e-90

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 274.20  E-value: 1.15e-90
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046    9 INPLTYIIPILVAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPVRPSSASPTLFILTPTLALFIAL 88
Cdd:MTH00029  11 IKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAI 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046   89 SIWTPLPMP--MMLADMNLGLLFMLALSSTAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLGIILLSIVILSGGFS 166
Cdd:MTH00029  91 LAWAIVTMDqgVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLN 170

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046  167 LKTLTITQEPAWLLLSSWPLTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMNTLSATL 246
Cdd:MTH00029 171 ISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIF 250

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046  247 F----LSPGQTQPELF--------------SMNLMTKATLLTIIFLWVRASYPRFRYDQLMHLLWKQFLPITLALCLWHT 308
Cdd:MTH00029 251 FlggwLSPLDGIPTPPeafsifeqiassksSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTA 330

                        330
                 ....*....|.
gi 14193046  309 SLPISTFALPP 319
Cdd:MTH00029 331 GILIGFNGVPP 341
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 8-305 4.11e-88

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 266.26  E-value: 4.11e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046    8 IINPLTYIIPILVAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPVRPSSASPTLFILTPTLALFIA 87
Cdd:MTH00010   6 FISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILA 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046   88 LSIWTPLPMPMMLADMNLGLLFMLALSSTAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLGIILLSIVILSGGFSL 167
Cdd:MTH00010  86 LLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSF 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046  168 KTLtITQEPAWLLLSSWPLTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMNTLSATLF 247
Cdd:MTH00010 166 SKI-IMSQYSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFF 244

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 14193046  248 LSpgQTQPELFS-MNLMTKATLLTIIFLWVRASYPRFRYDQLMHLLWKQFLPITLALCL 305
Cdd:MTH00010 245 TS--FIPSIFISdLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLM 301
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 15-301 1.87e-66

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 210.14  E-value: 1.87e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046   15 IIPILVAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPVRPSSASPTLFILTPTLALFIALSIWTPL 94
Cdd:MTH00090   6 MIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVL 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046   95 PMPMMLADMNLGLLFMLALSSTAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLGIILLSIVILSGGFSLKTltitq 174
Cdd:MTH00090  86 PYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVS----- 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046  175 epaWLLLSSWPLTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMNTLSATLFlspgqtq 254
Cdd:MTH00090 161 ---SFSLSLFVIYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLF------- 230

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 14193046  255 pelFSMNLMTKATLLTIIfLWVRASYPRFRYDQLMHLLWKQFLPITL 301
Cdd:MTH00090 231 ---FKFSFLMLFLIFSLL-IFIRSSYPRFRYDMMMSMFWFKFLPLSL 273
ndhA CHL00032
NADH dehydrogenase subunit 1
 12-310 4.27e-55

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 183.23  E-value: 4.27e-55
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046   12 LTYIIPILVAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPVRPSSASPTLFILTPTLA---LFIAL 88
Cdd:CHL00032  34 LTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAvisILLSY 113

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046   89 SIwTPLPMPMMLADMNLGLLFMLALSSTAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLGIILLSIVILSGgfSLK 168
Cdd:CHL00032 114 LV-IPFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSN--SLS 190

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046  169 TLTITQEPAWLLLSSWPL------TMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMNTL 242
Cdd:CHL00032 191 TVDIVEAQSKYGFWGWNLwrqpigFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLF 270

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046  243 SATLFLS------PGQTQPELFSMNLM--------------TKATLLTIIFLWVRASYPRFRYDQLMHLLWKQFLPITLA 302
Cdd:CHL00032 271 VTVLYLGgwnlsiPYIFIPELFEINKTggvfgttigifitlAKTYLFLFISITTRWTLPRLRMDQLLNLGWKFLLPISLG 350


                 ....*...
gi 14193046  303 LCLWHTSL 310
Cdd:CHL00032 351 NLLLTTSF 358
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 18-301 4.06e-49

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 165.48  E-value: 4.06e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046   18 ILVAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPVRPSSASPTLFILTPTLALFIALSIWTPLPMP 97
Cdd:MTH00058  14 ILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYCFIYGSY 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046   98 MMLADMNLGLLFMLALSSTAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLGIILLSIVILSGGFSLktLTITQEPA 177
Cdd:MTH00058  94 YSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSL--VDFYYSGW 171

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046  178 WLLLSSWPLTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMMMNTLSATLFLSPGqtqpel 257
Cdd:MTH00058 172 LSVLLFPLIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFGGG------ 245

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 14193046  258 fSMNLMTKATLLtiIFLWVRASYPRFRYDQLMHLLWKQFLPITL 301
Cdd:MTH00058 246 -FVSIMLLFHLL--FFMWARATLPRVRYDYFVNFFWEYCLVLLI 286
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
5-306 5.51e-33

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 123.37  E-value: 5.51e-33
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046   5 LNHIINPLTYIIPILVAVAFLTLLERKILGYMQLRKGPnivgpfGLLQPIADGVKLFIKEPVRPSSASPtLFILTP---- 80
Cdd:COG0650   1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASW-LFRAAPyval 73

                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046  81 --TLALFIALSIWTPLPMPMMLADMnLGLLFMLALSSTAvysILWSGWASNSKYALIGALRAVAQTISYEVTLGIILLSI 158
Cdd:COG0650  74 aaMLLAALLVPVLTTGPPLSFSGDL-IVLVYLLALARFF---LALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFAL 149

                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14193046 159 VILSGGFSLKTLTITQE---PAWLLLSSWPLTMMWYVSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYAN 235
Cdd:COG0650 150 ALLAGSTSLSDIVAYQAahgPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALK 229

                       250       260       270       280       290       300       310
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 14193046 236 IMMMNTLSATLFLSPGQTQPELFSMNLMT-KATLLTIIFLWVRASYPRFRYDQLMHLLWKQFLPITLALCLW 306
Cdd:COG0650 230 LFVLLSLFVNLFLPWGIALTLLLALLLFLlKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLA 301
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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