NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|21313652|ref|NP_082271|]
View 

membrane progestin receptor alpha [Mus musculus]

Protein Classification

hemolysin III family protein( domain architecture ID 10503285)

hemolysin III family protein is an integral membrane protein that may have hemolytic and cytotoxic activity against a broad range of species and cell types

Gene Ontology:  GO:0016020|GO:0015267
TCDB:  1.C.113

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
HlyIII pfam03006
Haemolysin-III related; Members of this family are integral membrane proteins. This family ...
 65-289 2.15e-51

Haemolysin-III related; Members of this family are integral membrane proteins. This family includes a protein with hemolytic activity from Bacillus cereus. It has been proposed that YOL002c encodes a Saccharomyces cerevisiae protein that plays a key role in metabolic pathways that regulate lipid and phosphate metabolism. In eukaryotes, members are seven-transmembrane pass molecules found to encode functional receptors with a broad range of apparent ligand specificities, including progestin and adipoQ receptors, and hence have been named PAQR proteins. The mammalian members include progesterone binding proteins. Unlike the case with GPCR receptor proteins, the evolutionary ancestry of the members of this family can be traced back to the Archaea. This family belongs to the CREST superfamily, which are distantly related to GPCRs.


:

Pssm-ID: 427098  Cd Length: 222  Bit Score: 170.14  E-value: 2.15e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21313652    65 FQRHNEAVNVWTHLL-AALALLLRLIGLAASVDFREDPHALPLFFIVLASFTYLSFSAVAHLLQAKSEFWHYSFFFLDYV 143
Cdd:pfam03006   1 FQIHNETLNIWTHLLgAILFIALLIFLLALATIDSQLSAVLPFLIFLLSACLCLGCSALYHTFSCHSEKVRKLFRKLDYS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21313652   144 GVAVYQFGSALAHFYYAIEPSWHDK-VQAIFLPTAAFLAWLSCAGSCYNKYsqkpglLGRIFQEAPSALAYVLDISPVLH 222
Cdd:pfam03006  81 GIFLLIAGSYTPVIYYAFYCAPKLGtIYLSFIWALAILGIISKLLWCFSKP------APRWLRTAVYILMGWSGIIPIAH 154

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 21313652   223 RIIVSPLPAEED-PALLYHKCQVVFFLLAAAFFSTVMPESWFPGSCHIFGQGHQVFHVFLVLCTLAQL 289
Cdd:pfam03006 155 RALALGGAGEALeIALVLLVLGGVLYIIGAVFYALRVPERLFPGKFDIVGGSHQIFHVFVVLAALCHY 222
 
Name Accession Description Interval E-value
HlyIII pfam03006
Haemolysin-III related; Members of this family are integral membrane proteins. This family ...
 65-289 2.15e-51

Haemolysin-III related; Members of this family are integral membrane proteins. This family includes a protein with hemolytic activity from Bacillus cereus. It has been proposed that YOL002c encodes a Saccharomyces cerevisiae protein that plays a key role in metabolic pathways that regulate lipid and phosphate metabolism. In eukaryotes, members are seven-transmembrane pass molecules found to encode functional receptors with a broad range of apparent ligand specificities, including progestin and adipoQ receptors, and hence have been named PAQR proteins. The mammalian members include progesterone binding proteins. Unlike the case with GPCR receptor proteins, the evolutionary ancestry of the members of this family can be traced back to the Archaea. This family belongs to the CREST superfamily, which are distantly related to GPCRs.


Pssm-ID: 427098  Cd Length: 222  Bit Score: 170.14  E-value: 2.15e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21313652    65 FQRHNEAVNVWTHLL-AALALLLRLIGLAASVDFREDPHALPLFFIVLASFTYLSFSAVAHLLQAKSEFWHYSFFFLDYV 143
Cdd:pfam03006   1 FQIHNETLNIWTHLLgAILFIALLIFLLALATIDSQLSAVLPFLIFLLSACLCLGCSALYHTFSCHSEKVRKLFRKLDYS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21313652   144 GVAVYQFGSALAHFYYAIEPSWHDK-VQAIFLPTAAFLAWLSCAGSCYNKYsqkpglLGRIFQEAPSALAYVLDISPVLH 222
Cdd:pfam03006  81 GIFLLIAGSYTPVIYYAFYCAPKLGtIYLSFIWALAILGIISKLLWCFSKP------APRWLRTAVYILMGWSGIIPIAH 154

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 21313652   223 RIIVSPLPAEED-PALLYHKCQVVFFLLAAAFFSTVMPESWFPGSCHIFGQGHQVFHVFLVLCTLAQL 289
Cdd:pfam03006 155 RALALGGAGEALeIALVLLVLGGVLYIIGAVFYALRVPERLFPGKFDIVGGSHQIFHVFVVLAALCHY 222
 
Name Accession Description Interval E-value
HlyIII pfam03006
Haemolysin-III related; Members of this family are integral membrane proteins. This family ...
 65-289 2.15e-51

Haemolysin-III related; Members of this family are integral membrane proteins. This family includes a protein with hemolytic activity from Bacillus cereus. It has been proposed that YOL002c encodes a Saccharomyces cerevisiae protein that plays a key role in metabolic pathways that regulate lipid and phosphate metabolism. In eukaryotes, members are seven-transmembrane pass molecules found to encode functional receptors with a broad range of apparent ligand specificities, including progestin and adipoQ receptors, and hence have been named PAQR proteins. The mammalian members include progesterone binding proteins. Unlike the case with GPCR receptor proteins, the evolutionary ancestry of the members of this family can be traced back to the Archaea. This family belongs to the CREST superfamily, which are distantly related to GPCRs.


Pssm-ID: 427098  Cd Length: 222  Bit Score: 170.14  E-value: 2.15e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21313652    65 FQRHNEAVNVWTHLL-AALALLLRLIGLAASVDFREDPHALPLFFIVLASFTYLSFSAVAHLLQAKSEFWHYSFFFLDYV 143
Cdd:pfam03006   1 FQIHNETLNIWTHLLgAILFIALLIFLLALATIDSQLSAVLPFLIFLLSACLCLGCSALYHTFSCHSEKVRKLFRKLDYS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 21313652   144 GVAVYQFGSALAHFYYAIEPSWHDK-VQAIFLPTAAFLAWLSCAGSCYNKYsqkpglLGRIFQEAPSALAYVLDISPVLH 222
Cdd:pfam03006  81 GIFLLIAGSYTPVIYYAFYCAPKLGtIYLSFIWALAILGIISKLLWCFSKP------APRWLRTAVYILMGWSGIIPIAH 154

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 21313652   223 RIIVSPLPAEED-PALLYHKCQVVFFLLAAAFFSTVMPESWFPGSCHIFGQGHQVFHVFLVLCTLAQL 289
Cdd:pfam03006 155 RALALGGAGEALeIALVLLVLGGVLYIIGAVFYALRVPERLFPGKFDIVGGSHQIFHVFVVLAALCHY 222
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH