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Conserved domains on  [gi|2215160396|ref|NP_062322|]
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protein unc-93 homolog B1 isoform a [Mus musculus]

Protein Classification

protein unc-93 homolog B1( domain architecture ID 13024470)

protein unc-93 homolog B1 (Unc-93B1) plays an important role in innate and adaptive immunity by regulating nucleotide-sensing Toll-like receptor (TLR) signaling

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MFS_unc93B1 cd17408
Protein unc-93 homolog B1 of the Major Facilitator Superfamily of transporters; Protein unc-93 ...
64-520 0e+00

Protein unc-93 homolog B1 of the Major Facilitator Superfamily of transporters; Protein unc-93 homolog B1 (UNC93B1) controls intracellular trafficking and transport of a subset of Toll-like receptors (TLRs), including TLR3, TLR7 and TLR9, from the endoplasmic reticulum to endolysosomes where they can engage pathogen nucleotides and activate signaling cascades. It regulates differential transport of TLR7 and TLR9 into signaling endosomes to prevent autoimmunity. UNC93B1 belongs to the Unc-93 family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


:

Pssm-ID: 340966 [Multi-domain]  Cd Length: 456  Bit Score: 839.06  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2215160396  64 VLAASTGVTLTYGVYLGLLQMQLILHYDETYREVKYGNMGLPDIDSKMLMGINVTPIAALLYTPVLIRFFGTKWMMFLAV 143
Cdd:cd17408     1 VVAASLGGMLTYGVYLGLLQMQLILHYDETYREVKYGNMGLQDIDSKMLMGINVTPIVALLYTPVLIRFFGTKWMMFLAV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2215160396 144 GIYALFVSTNYWERYYTLVPSAVALGMAIVPLWASMGNYITRMSQKYYEYSHYKEQDEQGpQQRPPRGSHAPYLLVFQAI 223
Cdd:cd17408    81 GIYALFVSTNYWERYYTLVPSAVAIGVAIVPLWASMGNYITRMAQKYYEYVNYKEEDVQE-QKRPPRGAYHKYIIIFQSV 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2215160396 224 FYSFFHLSFACAQLPMIYFLNNYLYDLNHTLINVQSCGTKSQGILNGFNKTVLRTLPRSKNLIVVESVLMAVAFLAMLMV 303
Cdd:cd17408   160 FYAIFHLSFVCAQLPMIFFLNNYLYDYNHTLYNVKHCGAQSKGILEGFNKTVLITLPRSLNLIIVESALMGAAFLSMLLV 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2215160396 304 LGLCGAAYRPTEEIDLRSVGWGNIFQLPFKHVRDFRLRHLVPFFIYSGFEVLFACTGFALGYGVCSMGLERLAYLLIAYS 383
Cdd:cd17408   240 LLLCGAAYRPTEEIDLRSIGWGNIFQLPFKHLRDYRLRLLIPFFIYSGFEVLFACTGFALSYGVCSLGLERLAYLLMAYG 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2215160396 384 LGASASSVLGLLGLWLPRSVPLVAGAGLHLLLTLSLFFWAPAPRVLQHSWIFYFVAALWGVGSALNKTGLSTLLGILYED 463
Cdd:cd17408   320 LSASLCSLLALSLLRLPRPVPLVAGAFLHLTLLITLFFWAPTPRLTSQMPLLYVVAALWGLGSALNKTGLSTLLGILYED 399
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2215160396 464 KERQDFIFTIYHWWQAVAIFVVYLGSSLPMKAKLAVLLVTLVAAAASYLWMEQKLQQ 520
Cdd:cd17408   400 KERQDFIFTIYHWWQALAIFIVYLWSNLPMKAKLGILLATLVIALLSYLWMERKLAR 456
 
Name Accession Description Interval E-value
MFS_unc93B1 cd17408
Protein unc-93 homolog B1 of the Major Facilitator Superfamily of transporters; Protein unc-93 ...
64-520 0e+00

Protein unc-93 homolog B1 of the Major Facilitator Superfamily of transporters; Protein unc-93 homolog B1 (UNC93B1) controls intracellular trafficking and transport of a subset of Toll-like receptors (TLRs), including TLR3, TLR7 and TLR9, from the endoplasmic reticulum to endolysosomes where they can engage pathogen nucleotides and activate signaling cascades. It regulates differential transport of TLR7 and TLR9 into signaling endosomes to prevent autoimmunity. UNC93B1 belongs to the Unc-93 family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340966 [Multi-domain]  Cd Length: 456  Bit Score: 839.06  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2215160396  64 VLAASTGVTLTYGVYLGLLQMQLILHYDETYREVKYGNMGLPDIDSKMLMGINVTPIAALLYTPVLIRFFGTKWMMFLAV 143
Cdd:cd17408     1 VVAASLGGMLTYGVYLGLLQMQLILHYDETYREVKYGNMGLQDIDSKMLMGINVTPIVALLYTPVLIRFFGTKWMMFLAV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2215160396 144 GIYALFVSTNYWERYYTLVPSAVALGMAIVPLWASMGNYITRMSQKYYEYSHYKEQDEQGpQQRPPRGSHAPYLLVFQAI 223
Cdd:cd17408    81 GIYALFVSTNYWERYYTLVPSAVAIGVAIVPLWASMGNYITRMAQKYYEYVNYKEEDVQE-QKRPPRGAYHKYIIIFQSV 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2215160396 224 FYSFFHLSFACAQLPMIYFLNNYLYDLNHTLINVQSCGTKSQGILNGFNKTVLRTLPRSKNLIVVESVLMAVAFLAMLMV 303
Cdd:cd17408   160 FYAIFHLSFVCAQLPMIFFLNNYLYDYNHTLYNVKHCGAQSKGILEGFNKTVLITLPRSLNLIIVESALMGAAFLSMLLV 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2215160396 304 LGLCGAAYRPTEEIDLRSVGWGNIFQLPFKHVRDFRLRHLVPFFIYSGFEVLFACTGFALGYGVCSMGLERLAYLLIAYS 383
Cdd:cd17408   240 LLLCGAAYRPTEEIDLRSIGWGNIFQLPFKHLRDYRLRLLIPFFIYSGFEVLFACTGFALSYGVCSLGLERLAYLLMAYG 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2215160396 384 LGASASSVLGLLGLWLPRSVPLVAGAGLHLLLTLSLFFWAPAPRVLQHSWIFYFVAALWGVGSALNKTGLSTLLGILYED 463
Cdd:cd17408   320 LSASLCSLLALSLLRLPRPVPLVAGAFLHLTLLITLFFWAPTPRLTSQMPLLYVVAALWGLGSALNKTGLSTLLGILYED 399
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2215160396 464 KERQDFIFTIYHWWQAVAIFVVYLGSSLPMKAKLAVLLVTLVAAAASYLWMEQKLQQ 520
Cdd:cd17408   400 KERQDFIFTIYHWWQALAIFIVYLWSNLPMKAKLGILLATLVIALLSYLWMERKLAR 456
UNC-93 pfam05978
Ion channel regulatory protein UNC-93; The proteins in this family are represented by UNC-93 ...
121-512 5.42e-03

Ion channel regulatory protein UNC-93; The proteins in this family are represented by UNC-93 from Caenorhabditis elegans and also includes protein unc-93 homolog A (UNC93A), protein unc-93 homolog B1 (UNC93B1), and UNC93-like protein MFSD11 (also called major facilitator superfamily domain- containing protein 11 or protein ET). UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. UNC-93 acts as a regulatory subunit of a multi-subunit potassium channel complex that may function in coordinating muscle contraction in C. elegans. UNC93B1 controls intracellular trafficking and transport of a subset of Toll-like receptors (TLRs), including TLR3, TLR7 and TLR9, from the endoplasmic reticulum to endolysosomes where they can engage pathogen nucleotides and activate signaling cascades. MFSD11 is ubiquitously expressed in the periphery and the central nervous system of mice, where it is expressed in excitatory and inhibitory mouse brain neurons.


Pssm-ID: 461792 [Multi-domain]  Cd Length: 379  Bit Score: 39.23  E-value: 5.42e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2215160396 121 AALLYTPVLIRFFGTKWMMFLAVGIYALFVSTN-YWERYYTLVPSAVaLGMAIVPLWASMGNYITRMSQkyyeyshykeq 199
Cdd:pfam05978  23 FACLIAPSIVDKLTPKWSMVIGAACYAIFQLGFlFLNSYYLYFSSAL-LGFGAAFLWTGQGSYLSENST----------- 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2215160396 200 deqgpqqRPPRGSHApyllvfqAIFYSFFHLS-FACAQLPMIYFLnnylydlnhtlinvqscgtkSQGILNGFNKTVLRT 278
Cdd:pfam05978  91 -------RETIERNT-------SISWAMLQSSlIGGGIFLFIVFQ--------------------SGGQGDEISDGQIKL 136
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2215160396 279 LprsknlivvESVLMAVAFLAMLMVLGLCGAAYRPTEEIDLRSVGWGNIFQLPFKHVRDFRLRHLVPFFIYSGFEVLF-- 356
Cdd:pfam05978 137 L---------YSVFTAISIVGIVVFAFLPSPDYENVLSSKEKIQSFADQFKSTFRLLRTPKMLLLAVFFFYTGLEVSFwt 207
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2215160396 357 ----ACTGFALGYGvcSMGLERLAYLLIAYSLG-ASASSVLGLLG---LWLPRSVPLVAGAGLHLLLTLSLFFWAPA--- 425
Cdd:pfam05978 208 siypTCISFTSKLG--TNTTYLIAIYSISTGLGqIIGGIFFGPLGkriRKFGRDPTILLGTLLHLVYFILIYLSFPNdap 285
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2215160396 426 -------PRVLQHS-WIFYFVAALWGVGSALNKTGLSTLLGILYEDKERQDF-IFTIYHWWQAVAIFvvYLGSSLPMKAK 496
Cdd:pfam05978 286 lhptdgpGLLITPSlYLAFIISFLLGFSDACWNTQIYSILADAYPEDSSQAFaVFKFYQSIASCVAF--FYSPYLTLYWH 363
                         410
                  ....*....|....*.
gi 2215160396 497 LAVLLVTLVAAAASYL 512
Cdd:pfam05978 364 LLILTIFSIFATICFF 379
 
Name Accession Description Interval E-value
MFS_unc93B1 cd17408
Protein unc-93 homolog B1 of the Major Facilitator Superfamily of transporters; Protein unc-93 ...
64-520 0e+00

Protein unc-93 homolog B1 of the Major Facilitator Superfamily of transporters; Protein unc-93 homolog B1 (UNC93B1) controls intracellular trafficking and transport of a subset of Toll-like receptors (TLRs), including TLR3, TLR7 and TLR9, from the endoplasmic reticulum to endolysosomes where they can engage pathogen nucleotides and activate signaling cascades. It regulates differential transport of TLR7 and TLR9 into signaling endosomes to prevent autoimmunity. UNC93B1 belongs to the Unc-93 family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340966 [Multi-domain]  Cd Length: 456  Bit Score: 839.06  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2215160396  64 VLAASTGVTLTYGVYLGLLQMQLILHYDETYREVKYGNMGLPDIDSKMLMGINVTPIAALLYTPVLIRFFGTKWMMFLAV 143
Cdd:cd17408     1 VVAASLGGMLTYGVYLGLLQMQLILHYDETYREVKYGNMGLQDIDSKMLMGINVTPIVALLYTPVLIRFFGTKWMMFLAV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2215160396 144 GIYALFVSTNYWERYYTLVPSAVALGMAIVPLWASMGNYITRMSQKYYEYSHYKEQDEQGpQQRPPRGSHAPYLLVFQAI 223
Cdd:cd17408    81 GIYALFVSTNYWERYYTLVPSAVAIGVAIVPLWASMGNYITRMAQKYYEYVNYKEEDVQE-QKRPPRGAYHKYIIIFQSV 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2215160396 224 FYSFFHLSFACAQLPMIYFLNNYLYDLNHTLINVQSCGTKSQGILNGFNKTVLRTLPRSKNLIVVESVLMAVAFLAMLMV 303
Cdd:cd17408   160 FYAIFHLSFVCAQLPMIFFLNNYLYDYNHTLYNVKHCGAQSKGILEGFNKTVLITLPRSLNLIIVESALMGAAFLSMLLV 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2215160396 304 LGLCGAAYRPTEEIDLRSVGWGNIFQLPFKHVRDFRLRHLVPFFIYSGFEVLFACTGFALGYGVCSMGLERLAYLLIAYS 383
Cdd:cd17408   240 LLLCGAAYRPTEEIDLRSIGWGNIFQLPFKHLRDYRLRLLIPFFIYSGFEVLFACTGFALSYGVCSLGLERLAYLLMAYG 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2215160396 384 LGASASSVLGLLGLWLPRSVPLVAGAGLHLLLTLSLFFWAPAPRVLQHSWIFYFVAALWGVGSALNKTGLSTLLGILYED 463
Cdd:cd17408   320 LSASLCSLLALSLLRLPRPVPLVAGAFLHLTLLITLFFWAPTPRLTSQMPLLYVVAALWGLGSALNKTGLSTLLGILYED 399
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2215160396 464 KERQDFIFTIYHWWQAVAIFVVYLGSSLPMKAKLAVLLVTLVAAAASYLWMEQKLQQ 520
Cdd:cd17408   400 KERQDFIFTIYHWWQALAIFIVYLWSNLPMKAKLGILLATLVIALLSYLWMERKLAR 456
MFS_unc93_like cd17338
Unc-93 family of the Major Facilitator Superfamily of transporters; The Unc-93 family is ...
64-517 2.47e-110

Unc-93 family of the Major Facilitator Superfamily of transporters; The Unc-93 family is composed of Caenorhabditis elegans uncoordinated protein 93 (also called putative potassium channel regulatory protein unc-93) and similar proteins including three vertebrate members: protein unc-93 homolog A (UNC93A), protein unc-93 homolog B1 (UNC93B1), and UNC93-like protein MFSD11 (also called major facilitator superfamily domain-containing protein 11 or protein ET). Unc-93 acts as a regulatory subunit of a multi-subunit potassium channel complex that may function in coordinating muscle contraction in C. elegans. The human UNC93A gene is located in a region of the genome that is frequently associated with ovarian cancer, however, there is no evidence that UNC93A has a tumor suppressor function. UNC93B1 controls intracellular trafficking and transport of a subset of Toll-like receptors (TLRs), including TLR3, TLR7 and TLR9, from the endoplasmic reticulum to endolysosomes where they can engage pathogen nucleotides and activate signaling cascades. MFSD11 is ubiquitously expressed in the periphery and the central nervous system of mice, where it is expressed in excitatory and inhibitory mouse brain neurons. The unc93-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340896 [Multi-domain]  Cd Length: 388  Bit Score: 335.85  E-value: 2.47e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2215160396  64 VLAASTGVTLTYGVYLGLLQMQLILHYDetyrevkygnmglpDIDSKMLMGINVTPIAALLYTPVLIRFFGTKWMMFLAV 143
Cdd:cd17338     1 VIILSFGFLLIFLAYSALQNLQTSLHEN--------------GLGSISLGILYSSFAVSSFIAPLLVKLLGEKITLVLGG 66
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2215160396 144 GIYALFVSTNYWERYYTLVPSAVALGMAIVPLWASMGNYITRMSQKyyeyshykeqdeqgpqqrpprgshaPYLLVFQAI 223
Cdd:cd17338    67 LGYAIFIASNIFPIWGTLVPASIILGFAAAILWTAQGTYITRISDE-------------------------SNIGRNFGI 121
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2215160396 224 FYSFFHLSFACAQLPMIYFLNNYLYDLNHTLInvqscgtksqgilngfnktvlrtlprsknlivvESVLMAVAFLAMLMV 303
Cdd:cd17338   122 FWSIFQLSQVFGNLISLALLNHSKGSSGTTIL---------------------------------FIVFMAIMLVGIILL 168
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2215160396 304 LGLCGAAYRPTEEIDLRSVGWG----NIFQLPFKHVRDFRLRHLVPFFIYSGFEVLFACTGFALGYGVCSMGLERLAYLL 379
Cdd:cd17338   169 FFLRGPDNEVITEIESSSVGESmekkNLFKLPFTLLKDKRFLLLIPLLIYSGLEQTFFSGVFTLIIGTPTTGIARVGYVM 248
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2215160396 380 IAYSLGASASSVLGLLGLW--LPRSVPLVAGAGLHLLLTLSLFFWAPA-PRVLQHSWIFYFVAALWGVGSALNKTGLSTL 456
Cdd:cd17338   249 AVYGFGDALGSLVAGLLSDwrFGRIVLAVIGAFVHIASLILLFLSGNVtPYGLGGSWLAYVSAILWGLGDAIFNTQIYAL 328
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2215160396 457 LGILYEdkERQDFIFTIYHWWQAVAIFVVYLGS-SLPMKAKLAVLLVTLVAAAASYLWMEQK 517
Cdd:cd17338   329 LGSLYE--NDSESAFAVYKLWQSIATAIAYFLSpYLPLFVKLFVLLALLILLAIFFLFVELK 388
MFS_unc93A_like cd17406
Protein unc-93 homolog A and similar proteins of the Major Facilitator Superfamily of ...
127-515 1.16e-33

Protein unc-93 homolog A and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of Caenorhabditis elegans Uncoordinated protein 93 (also called putative potassium channel regulatory protein unc-93), human protein unc-93 homolog A (HmUnc-93A or UNC93A), and similar proteins. Unc-93 acts as a regulatory subunit of a multi-subunit potassium channel complex that may function in coordinating muscle contraction in C. elegans. The human UNC93A gene is located in a region of the genome that is frequently associated with ovarian cancer, however, there is no evidence that UNC93A has a tumor suppressor function. This unc93A-like subfamily belongs to the Unc-93 family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340964 [Multi-domain]  Cd Length: 390  Bit Score: 132.38  E-value: 1.16e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2215160396 127 PVLIRFFGTKWMMFLAVGIYALFVSTNYWERYYTLVPSAVALGMAIVPLWASMGNYITRMSQKYYEYSHYKEQDeqgpqq 206
Cdd:cd17406    52 PLLIKKLGCKWTIVLSMFCYVLYIAANFYPSWYTLIPASIILGFGAAPLWSAKCTYLTESGNRYAKLTGKSGDD------ 125
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2215160396 207 rpprgshapYLLVFQAIFYSFFHLSFACAQLPMIYFLNNYLYDlnhTLInvqscgtksqGILNGFNktvlrtlprsknli 286
Cdd:cd17406   126 ---------VINRFFGIFFMIFQSSQIWGNLISSLVFSQSLIY---TLL----------GIYLGCG-------------- 169
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2215160396 287 vVESVLMAVAFLAMLmvlglcgAAYRPTEEIDLRSVGWgNIFQLPFKHVRDFRLRHLVPFFIYSGFEVLFACTGFALGYG 366
Cdd:cd17406   170 -ILAVIIVAVFLDPL-------KRDKEKRKQETKFSVL-SLLLATFKHLKDPRQLLLIPLTIYSGLEQAFLSGDFTKSYV 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2215160396 367 VCSMGLERLAYLLIAYSLGASASSVL-GLLGLWLPRSVPLVAGAGLHLLLTLSLFFWAPAPrvlQHSWIFYFVAALWGVG 445
Cdd:cd17406   241 TCALGIWNVGYVMICFGVVNALCSFLfGRLVKYTGRIPLFALGALVNLGLIIALLLWEPDP---DQLAIFFVFAGLWGMA 317
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2215160396 446 SALNKTGLSTLLGILYEDKerQDFIFTIYHWWQAVAIFVVY-LGSSLPMKAKLAVLLVTLVAAAASYLWME 515
Cdd:cd17406   318 DAVWQTQINALYGVLFPKN--KEAAFSNYRLWESLGFVIAFaYSNFLCVYVKLYILLAVLLLGMVGYGVVE 386
UNC-93 pfam05978
Ion channel regulatory protein UNC-93; The proteins in this family are represented by UNC-93 ...
121-512 5.42e-03

Ion channel regulatory protein UNC-93; The proteins in this family are represented by UNC-93 from Caenorhabditis elegans and also includes protein unc-93 homolog A (UNC93A), protein unc-93 homolog B1 (UNC93B1), and UNC93-like protein MFSD11 (also called major facilitator superfamily domain- containing protein 11 or protein ET). UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. UNC-93 acts as a regulatory subunit of a multi-subunit potassium channel complex that may function in coordinating muscle contraction in C. elegans. UNC93B1 controls intracellular trafficking and transport of a subset of Toll-like receptors (TLRs), including TLR3, TLR7 and TLR9, from the endoplasmic reticulum to endolysosomes where they can engage pathogen nucleotides and activate signaling cascades. MFSD11 is ubiquitously expressed in the periphery and the central nervous system of mice, where it is expressed in excitatory and inhibitory mouse brain neurons.


Pssm-ID: 461792 [Multi-domain]  Cd Length: 379  Bit Score: 39.23  E-value: 5.42e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2215160396 121 AALLYTPVLIRFFGTKWMMFLAVGIYALFVSTN-YWERYYTLVPSAVaLGMAIVPLWASMGNYITRMSQkyyeyshykeq 199
Cdd:pfam05978  23 FACLIAPSIVDKLTPKWSMVIGAACYAIFQLGFlFLNSYYLYFSSAL-LGFGAAFLWTGQGSYLSENST----------- 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2215160396 200 deqgpqqRPPRGSHApyllvfqAIFYSFFHLS-FACAQLPMIYFLnnylydlnhtlinvqscgtkSQGILNGFNKTVLRT 278
Cdd:pfam05978  91 -------RETIERNT-------SISWAMLQSSlIGGGIFLFIVFQ--------------------SGGQGDEISDGQIKL 136
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2215160396 279 LprsknlivvESVLMAVAFLAMLMVLGLCGAAYRPTEEIDLRSVGWGNIFQLPFKHVRDFRLRHLVPFFIYSGFEVLF-- 356
Cdd:pfam05978 137 L---------YSVFTAISIVGIVVFAFLPSPDYENVLSSKEKIQSFADQFKSTFRLLRTPKMLLLAVFFFYTGLEVSFwt 207
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2215160396 357 ----ACTGFALGYGvcSMGLERLAYLLIAYSLG-ASASSVLGLLG---LWLPRSVPLVAGAGLHLLLTLSLFFWAPA--- 425
Cdd:pfam05978 208 siypTCISFTSKLG--TNTTYLIAIYSISTGLGqIIGGIFFGPLGkriRKFGRDPTILLGTLLHLVYFILIYLSFPNdap 285
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2215160396 426 -------PRVLQHS-WIFYFVAALWGVGSALNKTGLSTLLGILYEDKERQDF-IFTIYHWWQAVAIFvvYLGSSLPMKAK 496
Cdd:pfam05978 286 lhptdgpGLLITPSlYLAFIISFLLGFSDACWNTQIYSILADAYPEDSSQAFaVFKFYQSIASCVAF--FYSPYLTLYWH 363
                         410
                  ....*....|....*.
gi 2215160396 497 LAVLLVTLVAAAASYL 512
Cdd:pfam05978 364 LLILTIFSIFATICFF 379
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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