|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.49e-165 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 464.68 E-value: 2.49e-165
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 1 MNPYAHTIIILSLIMGPLLTISSNHWILAWTGLEISTLAIIPLVAKQHHPRATEAATKYFLTQATASTLILFSSIINAWM 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 81 LGQWDITQMSNNTSCTILTTALAIKLGLAPFHFWLPEVMQGTSTTTALILVTWQKLAPLSLLMMTSQSLNTPLLLMLGLT 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 161 STLIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLMLFTFYTYIIMTSTMFLMIKLLKTNKISTMMTSWTKLPTM 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 241 NTLMMLTLMSLAGLPPLTGFMPKWLILQELTKQHMTIMATMMAMLSLLTLFFYLRVSYYATITLPPNSTNYSQQWRHKNN 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 5836004 321 QKPYLALLTTLSISMLPITPTLLTMP 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
1.62e-152 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 432.31 E-value: 1.62e-152
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 1 MNPYAHTIIILSLIMGPLLTISSNHWILAWTGLEISTLAIIPLVAKQHHPRATEAATKYFLTQATASTLILFSSIINAWM 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 81 LGQWDITQMSNNTSCTILTTALAIKLGLAPFHFWLPEVMQGTSTTTALILVTWQKLAPLSLLMMTSQSlNTPLLLMLGLT 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 161 STLIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLMLFTFYTYIIMTSTMFLMIKLLKTNKISTMMTSWTKLPTM 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 241 NTLMMLTLMSLAGLPPLTGFMPKWLILQELTKQHMTIMATMMAMLSLLTLFFYLRVSYYATITLPPNSTNYSQQWRHKNN 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*.
gi 5836004 321 QKPY-LALLTTLSISMLPITPTLLTM 345
Cdd:MTH00135 320 QLTLpLAISTTATLMLLPLTPAILAL 345
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
1.22e-145 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 414.70 E-value: 1.22e-145
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 1 MNPYAHTIIILSLIMGPLLTISSNHWILAWTGLEISTLAIIPLVAKQHHPRATEAATKYFLTQATASTLILFSSIINAWM 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 81 LGQWDITQMSNNTSCTILTTALAIKLGLAPFHFWLPEVMQGTSTTTALILVTWQKLAPLSLLMMTSQSLNTPLLLMLGLT 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 161 STLIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLMLFTFYTYIIMTSTMFLMIKLLKTNKISTMMTSWTKLPTM 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 241 NTLMMLTLMSLAGLPPLTGFMPKWLILQELTKQHMTIMATMMAMLSLLTLFFYLRVSYYATITLPPNSTNYSQQWRHKNN 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*
gi 5836004 321 QKPYLALLTTLSISMLPITPTLLTM 345
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNL 345
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
7.61e-127 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 367.25 E-value: 7.61e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 1 MNPYAHTIIILSLIMGPLLTISSNHWILAWTGLEISTLAIIPLVAKQHHPRATEAATKYFLTQATASTLILFSSIINAWM 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 81 LGQWDITQMSNNTSCTILTTALAIKLGLAPFHFWLPEVMQGTSTTTALILVTWQKLAPLSLLMMTSQSLNTPLLLMLGLT 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 161 STLIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLMLFTFYTYIIMTSTMFLMIKLLKTNKISTMMTSWTKLPTM 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 241 NTLMMLTLMSLAGLPPLTGFMPKWLILQELTKQHMTIMATMMAMLSLLTLFFYLRVSYYATITLPPNSTNYSQQWRHKN- 319
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENt 320
|
330 340
....*....|....*....|....*.
gi 5836004 320 NQKPYLALLTTLSISMLPITPTLLTM 345
Cdd:MTH00105 321 KPMTLLPTLIILSTMLLPLTPMLSIL 346
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.87e-105 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 312.29 E-value: 2.87e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 1 MNPYAHTIIILSLIMGPLLTISSNHWILAWTGLEISTLAIIPLVAKQHHPRATEAATKYFLTQATASTLILFSSIINAWM 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 81 LGQWDITQMSNNTSCTILTTALAIKLGLAPFHFWLPEVMQGTSTTTALILVTWQKLAPLSLLMMTSQSLNTPLLLMLGLT 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 161 STLIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLMLFTFYTYIIMTSTMFLMIKLLKTNKISTMMTSWTKLPTM 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 241 NTLMMLTLMSLAGLPPLTGFMPKWLILQELTKQHMTIMATMMAMLSLLTLFFYLRVSYYATITLPPNSTNYSQQWRHKNN 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 5836004 321 QKPYLALLTTLSISMLPITPTLLTMP 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-343 |
2.43e-94 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 284.52 E-value: 2.43e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 1 MNPYAHTIIILSLIMGPLLTISSNHWILAWTGLEISTLAIIPLVAKQHHPRATEAATKYFLTQATASTLILFSSIINAWM 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 81 LGQWDITQMSNNTSCTILTTALAIKLGLAPFHFWLPEVMQGTSTTTALILVTWQKLAPLSLLMMTSQSLNTPLLLMLGLT 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 161 STLIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLMLFTFYTYIIMTSTMFLMIKLLKTNKISTMMTSWTKLPTM 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 241 NTLMMLTLMSLAGLPPLTGFMPKWLILQELTKQHMTIMATMMAMLSLLTLFFYLRVSYYATITLPPNSTNYSQQWRHKNN 320
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGN 320
|
330 340
....*....|....*....|....*.
gi 5836004 321 QKPY---LALLTTLSISMLPITPTLL 343
Cdd:MTH00041 321 ITVYgviLSILSSISILGLLLIPLFL 346
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
7.96e-66 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 210.84 E-value: 7.96e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 1 MNPYAHTIIILSLIMGPLLTISSNHWILAWTGLEISTLAIIPLVAKQHHPRATEAATKYFLTQATASTLILFSSIINAWM 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 81 LGqwditqMSNNTSCTILTTALAIKLGLAPFHFWLPEVMQGTSTTTALILVTWQKLAPLSLLMMTsqsLNTPLLLMLGLT 160
Cdd:MTH00160 82 LM------LFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 161 STLIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLMLFTFYTYIIMTSTMFLMIKLLKTNKISTMMTSWTKLPTM 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 241 NTLMMLTLMSLAGLPPLTGFMPKWLILQELTKQHMTIMATMMAMLSLLTLFFYLRVSYYATITLPPNSTNYSQQwrHKNN 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLKK--KKNK 310
|
330 340
....*....|....*....|....*
gi 5836004 321 QKPYLALLTTLSISMLPITPTLLTM 345
Cdd:MTH00160 311 FSLILNFLSFISLFGLILSSLLFLL 335
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
13-315 |
6.15e-59 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 192.79 E-value: 6.15e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 13 LIMGPLLTISSNHWILAWTGLEISTLAIIPLVAKQHHPRATEAATKYFLTQATASTLILFSSIINAWMLGQWDITqmsnn 92
Cdd:MTH00144 13 MVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSM----- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 93 tscTILTTALAIKLGLAPFHFWLPEVMQGTSTTTALILVTWQKLAPLSLLMMTSQSLNTPLLLM-LGLTSTLIGGWNGLN 171
Cdd:MTH00144 88 ---SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLAYLLCvISVLSALVGSIGGLN 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 172 QTQLRKIMAFSSIAHLGWMITILTLSPKLMLFTFYTYiIMTSTMFLMIKLLKTNKISTMMTSWTKLPTMNTLMMLTLMSL 251
Cdd:MTH00144 165 QTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIY-IVSSGFLFFSLWSGDSGSMKDLGSLKPSYKTGLSIISLLLSL 243
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 5836004 252 AGLPPLTGFMPKWLILQELTKQHMTIMATMMAMLSLLTLFFYLRVSYYATITLPPNSTNYSQQW 315
Cdd:MTH00144 244 GGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSNSSKV 307
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
12-340 |
1.39e-49 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 168.80 E-value: 1.39e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 12 SLIMGPLLTISSNHWILAWTGLEISTLAIIPLVAKQHHPRATEAATKYFLTQATASTLILFSSIInawmlgQWDITQMSN 91
Cdd:MTH00011 14 TMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTM------MWSFPSLLK 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 92 NTSCTILTTALAIKLGLAPFHFWLPEVMQGTSTTTALILVTWQKLAPLSLLMMTSQSLNTPLLLMLGLTSTLIGGWNGLN 171
Cdd:MTH00011 88 NITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGGLGGMN 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 172 QTQLRKIMAFSSIAHLGWMITILTLSPKLMLFTFYTYIIMTSTMFLMIKLLKTNKISTMMTSWTKLPTMNTLMMLTLMSL 251
Cdd:MTH00011 168 QTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSL 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 252 AGLPPLTGFMPKWLILQELTKQHMTIMATMMAMLSLLTLFFYLRVsYYATITLPPNSTNYSQqwrhkNNQKPYLALLTTL 331
Cdd:MTH00011 248 GGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNL-IFNFMYLSPTFSSLKS-----APYEPKTKILISM 321
|
....*....
gi 5836004 332 SISMLPITP 340
Cdd:MTH00011 322 CTLSLGLIP 330
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
11-298 |
1.53e-44 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 155.22 E-value: 1.53e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 11 LSLIMGPLLTISSNHWILAWTGLEISTLAIIPLVAKQHHPRATEAATKYFLTQATASTLILFSSiinawMLGQWDITQMS 90
Cdd:MTH00197 5 FIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGG-----SLSFSNLYLSL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 91 nnTSCTILTTALAIKLGLAPFHFWLPEVMQGTSTTTALILVTWQKLAPLSLLMMTSQSLNtpLLLMLGLTSTLIGGWNGL 170
Cdd:MTH00197 80 --LSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSFM--GLLICSVLSSLIGGIGGM 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 171 NQTQLRKIMAFSSIAHLGWMITILTLSPKLMLFTFYTYIIMTSTMFLMIKLLKTNKISTMMTSWTKLPTMNTLMMLTLMS 250
Cdd:MTH00197 156 NQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLS 235
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 5836004 251 LAGLPPLTGFMPKWLILQELTKQHMTIMATMMAMLSLLTLFFYLRVSY 298
Cdd:MTH00197 236 LGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAY 283
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
1.82e-32 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 122.42 E-value: 1.82e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 23 SNHWILAWTGLEISTLAIIPLVA-KQHHPRATEAATKYFLTQATASTLILFSSIINAWMLGQWDITQMSNNTSCTI---- 97
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGyWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 98 -------LTTALAIKLGLAPFHFWLPEVMQGTSTT-TALILVTWQKLAPL-----SLLMMTSQSLNTPLLLMLGLTSTLI 164
Cdd:pfam00361 81 llllfllILVGFLFKSAQVPFHTWLPDAYEGAPTPvSALLAATLVKAGGYglirrSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 165 GGWNGLNQTQLRKIMAFSSIAHLGWMITILTL----SPKLMLFTFYTYIIMTSTMFLMIKLL-----KTNKISTMMTSWT 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAgtiyGIQAAIFHLLTHGLFSAGLFLCAGSViyrrvHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 5836004 236 KLPTMNTLMMLTLMSLAGLPPLTGFMPKWLILQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
6.27e-32 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 122.83 E-value: 6.27e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 13 LIMGPLLTISSNHWILAWTGLEISTLAIIPLVA-KQHHPRATEAATKYFLTQATASTLILFS-------------SIINA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIAqNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 79 WMLGQWDITQMSNNTSCTILTTALAIKLGLAPFHFWLPEVMQGTSTTTALILVTWQKLAPLSLLMmtSQSLNTPLLLMLG 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILV--SIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 159 LTSTLIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTL----SPKLMLFTFYTYIIMTSTMFLMIKLLKTNK--ISTMMT 232
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIgsfeSIQASLVYLFIYIIMSICVFSIILALNVYKnlIIEFSG 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 5836004 233 SWTKLPTMNTLMMLTLMSLAGLPPLTGFMPKWLILQELTKQHMTIMATMMAMLSLLTLFFYLRV 296
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
8-299 |
1.46e-31 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 123.69 E-value: 1.46e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 8 IIILSLIMGPLLTISSNHWILAWTGLEISTLAIIPLVA-KQHHPRATEAATKYFLTQATASTLILF-SSIINAwMLGQWD 85
Cdd:COG1007 106 ALLLFATLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYG-ATGSLN 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 86 ITQMSNNTS------------CTILTTALAIKLGLAPFHFWLPEVMQGTSTTTALILVTWQKLAPLSLLM-------MTS 146
Cdd:COG1007 185 LAGIAAALAagganspllllgLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLrllveafPGL 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 147 QSLNTPLLLMLGLTSTLIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLMLFT--FY--TYIIMTSTMFLMIKLL 222
Cdd:COG1007 265 AADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAalFYllAYLFMNLGAFAVILLL 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 223 -KTNKISTMMTSWTKL----PTMNTLMMLTLMSLAGLPPLTGFMPKWLILQELTKQHMTIMATMMAMLSLLTLFFYLRVS 297
Cdd:COG1007 345 sRKGGEAEEIEDLAGLarrsPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVV 424
|
..
gi 5836004 298 YY 299
Cdd:COG1007 425 KA 426
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
8-267 |
7.85e-31 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 121.28 E-value: 7.85e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 8 IIILSLIMGPLLTISSNHWILAWTGLEISTLAIIPLVA-KQHHPRATEAATKYFLTQATASTLILFSSIINAWMLGQWDI 86
Cdd:MTH00199 101 ILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSI 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 87 TQMSNNTSCTI----LTTALAIKLGLAPFHFWLPEVMQGTSTTTALILVTWQKLAPLSLLMMTSQSLNtpLLLMLGLTST 162
Cdd:MTH00199 181 QGINSILTGDVgkilITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTN--VVLICAVLSI 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 163 LIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTL----SPKLMLFTFYTYIIMTSTMFLMIKLLKTNK--ISTMMTSWTK 236
Cdd:MTH00199 259 IYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIgsfeSIQASLIYMIIYVIMSICSFSIILSLKLTKglIVEVSGLSRK 338
|
250 260 270
....*....|....*....|....*....|.
gi 5836004 237 LPTMNTLMMLTLMSLAGLPPLTGFMPKWLIL 267
Cdd:MTH00199 339 NPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-296 |
1.84e-29 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 117.61 E-value: 1.84e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 14 IMGPLLTISSNHWILAWTGLEISTLAIIPLVA-KQHHPRATEAATKYFLTQATASTLIL--------------FSSIINA 78
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLygmsllygatgslsFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 79 WMLGQWDITQMSnnTSCTILTTALAIKLGLAPFHFWLPEVMQGTSTTTALILVTWQKLAPLSLLM----MTSQSLNT--- 151
Cdd:PRK05777 193 LADGSGNSLLLL--FGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLrllvVAFGGLSEdwq 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 152 PLLLMLGLTSTLIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLMLFT--FY--TYIIMTSTMFLMIKLLKTN-K 226
Cdd:PRK05777 271 QVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAvlFYllAYLFMTLGAFGVISLLRRKgG 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 5836004 227 ISTMMTSWTKL----PTMNTLMMLTLMSLAGLPPLTGFMPKWLILQELTKQHMTIMATMMAMLSLLTLFFYLRV 296
Cdd:PRK05777 351 EAESISDFAGLskrsPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
7-296 |
1.05e-28 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 115.43 E-value: 1.05e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 7 TIIILSLIMGPLLTISSNHWILAWTGLEISTLAIIPLVA-KQHHPRATEAATKYFLTQATASTLILF--------SSIIN 77
Cdd:TIGR01770 105 YILLLFALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFgisliygfTGSLN 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 78 AWMLGQWDITQMSNNTSCTI----LTTALAIKLGLAPFHFWLPEVMQGTSTTTALILVTWQKLAPLSLLMMTSQSL---- 149
Cdd:TIGR01770 185 FEDLLLFLSNGMLNISLLLLgivlILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYIlfgf 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 150 ---NTPLLLMLGLTSTLIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKL----MLFTFYTYIIMTSTMFLMIKLL 222
Cdd:TIGR01770 265 seaWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEgikaVLFYIFIYALMSLGAFGVLSLL 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 223 KTNK------ISTMMTSWTKLPTMNTLMMLTLMSLAGLPPLTGFMPKWLILQELTKQHMTIMATMMAMLSLLTLFFYLRV 296
Cdd:TIGR01770 345 RSYKdewieyISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRV 424
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
13-300 |
2.40e-26 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 108.31 E-value: 2.40e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 13 LIMGPLLTISSNHWILAWTGLEISTLAIIPLVAKQHHPRATEAATKYFLTQATASTLILFSSIINAWMLGQWDITQMSNN 92
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAR 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 93 ----------TSCTILTTALAIKLGLAPFHFWLPEVMQGTST-TTALI--LVTwqKLAPLSLLMMTSQSLNT-------P 152
Cdd:COG0651 196 laeldpglllAAFALLLVGFGIKAALFPLHFWLPDAYPAAPSpVSALLsgLLT--KVGVYAILRVLTLLFGAdpalflgT 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 153 LLLMLGLTSTLIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLMLFTFYTYII----MTSTMFL----MIKLLKT 224
Cdd:COG0651 274 LLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLnhalAKALLFLaagaIERATGT 353
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 5836004 225 NKISTMMTSWTKLPTMNTLMMLTLMSLAGLPPLTGFMPKWLILQELTKQHMTIMATMMAMLSLLTLFFYLRVSYYA 300
Cdd:COG0651 354 RDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRIFGRA 429
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
9-267 |
3.99e-17 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 82.21 E-value: 3.99e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 9 IILSLIMGPLLTISSNHWILAWTGLEISTLAIIPLVAKQHHPRAT---------EAATKYFLTQATASTLILFSSII--- 76
Cdd:MTH00198 193 LVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALyfg 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 77 ---NAWMLGQ--------WDITQMSNNTSCTILTTALAIKLGLAPFHFWLPEVMQGTST-TTALILVTWQKLAplsLLMM 144
Cdd:MTH00198 273 ftgNEGMLGTilsatletTNIELRQGSLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTpTTALIAIIPKFTV---YILL 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 145 TSQSLNTPLLLMLGLTSTLIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLMLFTFYTYII--MTSTM--FLMIK 220
Cdd:MTH00198 350 TSLVITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVtyLVSALasFTVIC 429
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 5836004 221 LLKTNKIST-----------------MMTSWTKL----PTMNTLMMLTLMSLAGLPPLTGFMPKWLIL 267
Cdd:MTH00198 430 TLEEFGTRTptsrqrdgsfgnynlvrRLVDLTILsrgqPYIAFSLAIVFLSLAGIPPLLGFLGKWFIL 497
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-307 |
4.18e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 81.85 E-value: 4.18e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 33 LEISTLAIIPLVAKQHHPRATEAATKYFLTQATASTLILFSSIINAWMLGQWDITQMSN--------NTSCTILTTALAI 104
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGalaenptvVTAFGFVLLALAL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 105 KLGLAPFHFWLPEVMQGTSTT-TALILVTWQKLAPLSLL----------MMTSQSLNTpLLLMLGLTSTLIGGWNGLNQT 173
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAAPPVvTALLSGLVTKVAVYALIriyftvfggdFRFALGLGW-LLAVLALLSMLVGSLAALGQD 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 174 QLRKIMAFSSIAHLGWMITILTLSPKLMLF--TFYT--YIIMTSTMFL----MIKLLKTNKISTMMTSWTKLP-TMNTLM 244
Cdd:PRK08375 294 DVKRVLAYSTVSQMGYILLGLALLTPLALAagLLHLlhHALMKGALFLaagaIEVTYGTRRLSELSGLGRRMPlTAAAFA 373
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 5836004 245 MLTLmSLAGLPPLTGFMPKWLILQELTKQHMTIMATMMAMLSLLTLFFYLRVSYYATITLPPN 307
Cdd:PRK08375 374 VASL-SLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPPP 435
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
55-268 |
3.99e-15 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 76.13 E-value: 3.99e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 55 AATKYFLTQATASTLILFSSIINAWMLGQ-WDITQMSNNTSCTILTT--------ALAIKLGLAPFHFWLPEVMQGTSTT 125
Cdd:TIGR01972 157 AAMKFFLYTLAGSLLMLLAILGLYFLGGGtFDLLELLNLPLPFGVQTwlflaffiAFAVKVPLFPLHTWLPDAHVEAPTA 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 126 TALILV-TWQKLAP-------LSLLMMTSQSLnTPLLLMLGLTSTLIGGWNGLNQTQLRKIMAFSSIAHLGW-MITILTL 196
Cdd:TIGR01972 237 GSVILAgVLLKMGTygflrfnLPLFPDASLYF-APVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFvLLGIFSF 315
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 5836004 197 SPKLM---LFTFYTYIIMTSTMFLMIKLL----KTNKISTMMTSWTKLPTMNTLMMLTLMSLAGLPPLTGFMPKWLILQ 268
Cdd:TIGR01972 316 NELGIsgaVFQMISHGLITAALFLLVGVLyeraHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILL 394
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
8-316 |
3.33e-14 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 73.11 E-value: 3.33e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 8 IIILSLIMGPLLTISSNHWILAWTGLEISTLAIIPLVA-KQHHPRATEAATKYFLTQATASTLIL--FSsiinaWMLGQ- 83
Cdd:CHL00049 115 LFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGyTKKDVRSNEATMKYLLMGGASSSILVygFS-----WLYGLs 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 84 ------WDI------TQMSNNTSCTI----LTTALAIKLGLAPFHFWLPEVMQGTSTTTALILVTWQKLAPLSLlmmTSQ 147
Cdd:CHL00049 190 ggeielQEIvnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASAL---ATR 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 148 SLNTP----------LLLMLGLTSTLIGGWNGLNQTQLRKIMAFSSIAHLGW-MITILTLSPKL----MLFTFYTYIIMT 212
Cdd:CHL00049 267 IFDIPfyfssnewhlLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYvIIGIIVGDSNDgyasMITYMLFYIFMN 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 213 STMFLMIKLLK----TNKISTMMTSWTKLPTMNTLMMLTLMSLAGLPPLTGFMPKWLILQELTKQHMTIMATMMAMLSLL 288
Cdd:CHL00049 347 LGTFACIVLFGlrtgTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVI 426
|
330 340
....*....|....*....|....*...
gi 5836004 289 TLFFYLRVSYYATITLPPNSTNYSQQWR 316
Cdd:CHL00049 427 SIYYYLKIIKLLMTGRNQEITPYVRNYR 454
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
4.69e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 69.74 E-value: 4.69e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 33 LEISTLAIIPLVAKQHH-PRATEAATKYFLTQATASTLILFSSiinAWMLGQWDI-------TQMSNNTSCT------IL 98
Cdd:PRK08376 150 LEIMSIASYALVAFRNDtWEAIEAGIKYMFVGSLASSMVLLGI---ALLYGQYGTlnmaylaVKMSENPTVVakialaLF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 99 TTALAIKLGLAPFHFWLPEVM-QGTSTTTALILVTwqKLAPLSLLMMTSQSLNTP---------LLLMLGLTSTLIGGWN 168
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWLPDAYpAAPSSISAMLLVI--KQAGLYALARVLFSIYGPainlatvgwVIIILGCLTMFVGVAM 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 169 GLNQTQLRKIMAFSSIAHLGWM-----ITILTLSPKLM-----------LFTFYTYIIMTSTMFL----MIKLLKTNKIS 228
Cdd:PRK08376 305 AVVQKDVKRLLAYHSVSQIGYMllglgVGLAALGDPAMasygeialaggIYHIVNHALYKALLFLtagaVIYETGTRNLN 384
|
250 260 270
....*....|....*....|....*....|....*...
gi 5836004 229 TMMTSWTKLPTMNTLMMLTLMSLAGLPPLTGFMPKWLI 266
Cdd:PRK08376 385 ELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
38-267 |
5.08e-13 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 69.72 E-value: 5.08e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 38 LAIIP---LVAKQHHPRATEAATKYFLTQATASTLILFSSIINAWMLGQW--DITQMSNNTSCTILTT--------ALAI 104
Cdd:COG1008 142 LMLIPmyfLIGIWGGERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAAPLPLTAQLllflaffiAFAV 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 105 KLGLAPFHFWLPEVMQGTSTTTALILV-TWQKLAP-----LSLLMMTSQSLN-TPLLLMLGLTSTLIGGWNGLNQTQLRK 177
Cdd:COG1008 222 KVPMFPFHTWLPDAHVEAPTAGSVLLAgVLLKMGGygllrFALPLFPEASAYfAPLLAALGVIGIIYGALVALAQTDLKR 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 178 IMAFSSIAHLGWM-ITILTLSPKLMLFTFYTYI---IMTSTMFLMIKLL----KTNKISTMMTSWTKLPTMNTLMMLTLM 249
Cdd:COG1008 302 LIAYSSVSHMGFVlLGIFALNPLGLQGAVLQMVshgLITAALFLLVGVLydrtHTRDIADLGGLAKRMPVLAALFLLAAL 381
|
250
....*....|....*...
gi 5836004 250 SLAGLPPLTGFMPKWLIL 267
Cdd:COG1008 382 ASLGLPGTSGFVGEFLVL 399
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-296 |
1.17e-12 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 68.64 E-value: 1.17e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 48 HHPRATEAATKYFLTQATASTLILFSSIINAWMLGQWDITQMSNNTScTILTTALAIKLGLA------------PFHFWL 115
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAP-TILSSPLLTLILLLlllgafgksaqfPLHFWL 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 116 PEVMQGTSTTTALI-----------LVTwqKLAPLslLMMTSQSLntPLLLMLGLTSTLIGGWNGLNQTQLRKIMAFSSI 184
Cdd:COG1009 235 PDAMEGPTPVSALLhaatmvkagvyLLA--RLSPL--FALSPVWL--TVVAIIGAITALFAALIALAQTDIKRVLAYSTV 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 185 AHLGWMITILTLS-PKLMLFTFYTYIIMTSTMFLM----IKLLKTNKISTMMTSWTKLPTMNTLMMLTLMSLAGLPPLTG 259
Cdd:COG1009 309 SQLGYMFLALGVGaYVAALFHLLTHAFFKALLFLGagsvIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAG 388
|
250 260 270
....*....|....*....|....*....|....*....
gi 5836004 260 FMPKWLILQELTKQHMTIMATMMAML--SLLTLFFYLRV 296
Cdd:COG1009 389 FFSKEAILEAALEAGGLGPLLLAVALlgAFLTAFYSFRL 427
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-296 |
1.39e-11 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 65.46 E-value: 1.39e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 50 PRATEAATKYFLTQATASTLILF-SSIINAWMLGQWDITQMSN---NTSCTILTTAL-------AIKLGLAPFHFWLPEV 118
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGSTQLSAIALaliTSPSLGLALALvfviagiAFKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 119 MQGTSTTTALILVTWQKLAPLSL---LMMTSQSLNTP----LLLMLGLTSTLIGGWNGLNQTQLRKIMAFSSIAHLGW-M 190
Cdd:PRK02504 237 YEGSPTPVVAFLSVGSKAAGFALairLLVTAFPSFDEqwklLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFvM 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 191 ITILTLSPK---LMLFTFYTYIIMTSTMFLMIKLLK----TNKISTMMTSWTKLPTMNTLMMLTLMSLAGLPPLTGFMPK 263
Cdd:PRK02504 317 IGLVAGTEAgyaSMVFYLLAYLFMNLGAFACVILFSlrtgTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
250 260 270
....*....|....*....|....*....|...
gi 5836004 264 WLILQELTKQHMTIMATMMAMLSLLTLFFYLRV 296
Cdd:PRK02504 397 IYLFWAGWQAGLYLLVLVGLVTSVISIYYYIRV 429
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
96-263 |
3.67e-11 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 64.29 E-value: 3.67e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 96 TILTTALAIKLGLA--------PFHFWLPEVMQGTSTTTALILVTWQKLAPLSLLMMTSQSL-NTP----LLLMLGLTST 162
Cdd:PRK12650 204 PGLTTVVAVLIAVAaftksaqfPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFhDVAvwnwLLIIVGMITA 283
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 163 LIGGWNGLNQTQLRKIMAFSSIAHLGWMI-TILTLSPklmlFTFYTYIIMT-------STMFLMIKLLK----TNKISTM 230
Cdd:PRK12650 284 LMGAVFAVQKTDLKKLTAYSTVSQLGWIVaTIGVGTP----FALTAAVVHTlahalfkSSLFMLIGVVDhqagTRDIRRL 359
|
170 180 190
....*....|....*....|....*....|...
gi 5836004 231 MTSWTKLPTMNTLMMLTLMSLAGLPPLTGFMPK 263
Cdd:PRK12650 360 GSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSK 392
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-298 |
5.13e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 60.37 E-value: 5.13e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 33 LEISTLAIIPLVA-KQHHPRATEAATKYFLTQATASTL------ILFSSI-------INAWMLGQWdITQMSNNTSCTIL 98
Cdd:PRK12667 142 LEVLSISAYGLVAyYRDRGDAVEAAIKYALIGAVGTTLyflalaFLYATFgtlnmadLSAKIRGLS-FPLTGGLAGNPPL 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 99 TTALA---------IKLGLAPFHFWLPEV------------------MQGTSTTTALILVTWQKLAPLSLLMMTSqslnt 151
Cdd:PRK12667 221 ALGVAlalalwaftIKAAIFPNHFWLPDAhpaapspvsamlsglvvnVGAYAIIRFLYTIFGISPSLIDFRAALS----- 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 152 PLLLMLGLTSTLIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLMLFTFYTYII----------MTSTMFlmIKL 221
Cdd:PRK12667 296 PILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIInhaiaksllfLASGVF--IHA 373
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 5836004 222 LKTNKISTMMTSWTKLPTMNTLMMLTLMSLAGLPPLTGFMPKWLILQELTKQHMTIMATMMAMLSLLTLFFYLRVSY 298
Cdd:PRK12667 374 AGTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWY 450
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
34-274 |
1.09e-09 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 59.62 E-value: 1.09e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 34 EISTLA---IIPLVAKqhhpRATEAATKYFLTQATASTLILFSSIINAWMLGQWDITQMSNNTS-CTILTTALAI----- 104
Cdd:PRK08668 128 EIMTFSsfmMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADISQGLInDTSTGFALIVflfll 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 105 -----KLGLAPFHFWLPEVMQGTSTTTALILV-------TWQKLAPLSLLMMTS--------QSLNTP--LLLMLGLTST 162
Cdd:PRK08668 204 afgvaKAGIFPLHVWAPDAYSEAPQSFSAVLSgqlsklgAYGFLLVLYVLPGTKlfsefgtyRGVPLFnyILAWLGNISI 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 163 LIGGWNGLNQTQLRKIMAFSSIAHLGW-MITILTLSPKLM---LFTFYTYIIMTSTMFLMIKLL----KTNKISTMMTSW 234
Cdd:PRK08668 284 IVGTLMAILQEDIKKLIAYSSVANGGYiLVGLGLGTSLGFaggLFHVFNHALFKGLFFLIFAAViyrtGTTKISEMGGLI 363
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 5836004 235 TKLPTMNTLMMLTLMSLAGLPPLTGFMPKWLILQELTKQH 274
Cdd:PRK08668 364 EKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKG 403
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
111-298 |
1.76e-09 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 58.94 E-value: 1.76e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 111 FHFWLPEVMQGTSTTTALILVTWQKLAPLSLLMMTSQSLN-TPLLLML----GLTSTLIGGWNGLNQTQLRKIMAFSSIA 185
Cdd:MTH00020 229 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEqAPLALIIvtivGSLTVFFAATVGLVQNDLKKVIAYSTCS 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 186 HLGWMITILTLSP------KLMLFTFYTYIIMTSTMFLMIKLLKTNKISTMMTSWTKLPTMNTLMMLTLMSLAGLPPLTG 259
Cdd:MTH00020 309 QLGYMVVACGLSHysislfHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTG 388
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 5836004 260 FMPKWLILQELTKQHMTIMATMMAMLS-LLTLFFYLRVSY 298
Cdd:MTH00020 389 FYSKDLILELAFGQYYLIFAYWLGCFSaLLTAFYSIRLIY 428
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
38-266 |
1.94e-09 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 58.56 E-value: 1.94e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 38 LAIIPL---VAKQHHPRATEAATKYFLTQATASTLILFSSIINAWMLGQWDITQMSNNTSCTILTT----------ALAI 104
Cdd:PRK06473 138 LELIPLyllIAIWGGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFDYEPLRSHTLPLSTqllllapilvGFGI 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 105 KLGLAPFHFWLPEVMQGTSTTTALILV-TWQKLAPLSLL------MMTSQSLNTPLLLMLGLTSTLIGGWNGLNQTQLRK 177
Cdd:PRK06473 218 KIPLVPFHTWLPDAHVEASTPVSVLLAgVLLKLGTYGLLrfgvglFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKK 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 178 IMAFSSIAHLGWMITILTLSPKLML----FTFYTYIIMTSTMFLMIKLL--KT-----NKISTMMTSWTKLPTMNTLMML 246
Cdd:PRK06473 298 MVAYSSIGHMGYILLAAAAATPLSIlaavFQMISHGLISALLFLLVGVVykKTgsrdvDVLRGLLNPERGLPITGSLMIL 377
|
250 260
....*....|....*....|
gi 5836004 247 TLMSLAGLPPLTGFMPKWLI 266
Cdd:PRK06473 378 GVMASAGIPGMVGFIAEFLV 397
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
97-268 |
3.69e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 57.67 E-value: 3.69e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 97 ILTTALAIKLGLAPFHFWLPEvmqgtSTTTALILVT------WQKLAPLSL-----LMMTSQSLNTpLLLMLGLTSTLIG 165
Cdd:PRK12665 214 VLLVAFGIKAAVFPLSFWLPD-----SYPTAPAPVTavfaglLTKVGVYAIirthtLLFPGGGLDT-LLMVVALLTMVVG 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 166 GWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLML--FTFYT--YIIMTSTMFLMIKLLKTNKISTMMTSWTKL---- 237
Cdd:PRK12665 288 ILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLsgAIYYVahHITVQTTLFLVVGLIERQAGSSSLRRLGGLakas 367
|
170 180 190
....*....|....*....|....*....|.
gi 5836004 238 PTMNTLMMLTLMSLAGLPPLTGFMPKWLILQ 268
Cdd:PRK12665 368 PLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
4.69e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 57.27 E-value: 4.69e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 33 LEISTLAIIPLVAKQHHPRATEAATKYFLTQATASTLILFSSIINAWMLGQWDIT--QMSNNTSCTILTTALAIKLGLAP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSglATADPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 111 FHFWLPEVMQGTSTTTALIL-VTWQKLAPLSLLMMTSQSLNT-PLLLMLGLTSTLIGGWNGLNQTQLRKIMAFSSIAHLG 188
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLsGVVVKAGVFPLVRCALDVPGLdLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 189 WMItiltLSPKLMLFTFYTYIIMTSTMFLMIKLLK----TNKISTMMTSWTKLPtmntLMMLTLmSLAGLPPLTGFMPKW 264
Cdd:PRK07234 283 FIL----AAPLVGGLYALAHGLVKSTLFLCAGALPsrnfTELISQMLGIGKWIP----LTMASF-SIAGFPLLAGFVSKV 353
|
....*..
gi 5836004 265 LILQELT 271
Cdd:PRK07234 354 LTLKNLL 360
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
11-274 |
5.39e-09 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 57.55 E-value: 5.39e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 11 LSLIMGPLL-TISSNHWILAWTGLEISTLAIIPLVAKQHH-PRATEAATKYFLTQATASTLILFSSIINAWMLGQWDITQ 88
Cdd:TIGR00940 112 LLAFMGAMLgVVLSDNLILLYVFWELTSIVSFLLISYWHHrAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDA 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 89 MSNNTSCT-----ILTTALAIKLGLA------PFHFWLPEVMQGTSTTTA-LILVTWQKLAPLSLLMMTSQSLNTP---- 152
Cdd:TIGR00940 192 VIASADAIrnsplFGTAMVLVLLGAFtksaqfPFHIWLPDAMEAPTPVSAyLHSATMVKAGLYLLARFTPVFAGTEawfw 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 153 LLLMLGLTSTLIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTL-SPKLMLFTFYTYIIMTSTMFLMIKLLK--TNKIST 229
Cdd:TIGR00940 272 IVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLgSPSYHYQGDDSKIYALAAVAAVFHLINhaTFKGSL 351
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 5836004 230 MMTS------------------WTKLPTMNTLMMLTLMSLAGLPPLTGFMPKWLILQELTKQH 274
Cdd:TIGR00940 352 FMAAgiidhetgtrdirklgglFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAEAITAH 414
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
18-268 |
8.84e-09 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 56.48 E-value: 8.84e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 18 LLTISSNHWILAWTGLEISTLAIIPLVAKQHHPRATEAATKYFL------TQATASTLILFSS----IINAWMLGQW-DI 86
Cdd:PRK06458 122 LLALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIicsvgvAFALFGTILVYANaatvMGDGEMAILWtEL 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 87 TQMSNNTSCTILTTALAI-------KLGLAPFHFWLPEV-MQGTSTTTAL---ILVTWQKLAPLSLLMMTSQSLNT---- 151
Cdd:PRK06458 202 LKHASLLDPTLMKLAFVFlligfgtKVGLFPMHAWLPDAhSEAPSPVSALlsgVLLNVALYAVLRYYILIDAAIGSdfpg 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 152 PLLLMLGLTSTLIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLMLFTFYTYIIMTS--------TMFLMIKLLK 223
Cdd:PRK06458 282 RLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSltksaiffASGNVLQKYG 361
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 5836004 224 TNKISTMMTSWTKLPTMNTLMMLTLMSLAGLPPLTGFMPKWLILQ 268
Cdd:PRK06458 362 TRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILT 406
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
78-333 |
2.09e-08 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 55.54 E-value: 2.09e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 78 AWMLGQ--WDITQMSNNTSCTILTTALAI----KLGLAPFHFWLPEVMQGTSTTTALILVTWQKLAPLSLLM-----MTS 146
Cdd:MTH00207 159 GWTLNQghWSITNMWQTDMNNYIALSIMIaamtKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIrfypfLSS 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 147 QSLNTPLLLMLGLTSTLIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLS-PKLMLFTFYTYIIMTSTMFL----MIKL 221
Cdd:MTH00207 239 TYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGmPKLALFHLITHALFKALLFVcagsLIHS 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 222 -LKTNKISTMMTSWTKLPTMNTLMMLTLMSLAGLPPLTGFMPKWLILQ-ELTKQHMTIMATMMAMLSLLTLFFYLRVSYY 299
Cdd:MTH00207 319 hHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILEsSLFYPHNSLMILMIFLATALTAAYSTRFTLA 398
|
250 260 270
....*....|....*....|....*....|....
gi 5836004 300 aTITLPPNSTNYSQQWRHKNNQKPYLALLTTLSI 333
Cdd:MTH00207 399 -VLWSPNSSSPYHHLEDEDKSLTTPMLLLTLGAI 431
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
110-267 |
2.27e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 55.70 E-value: 2.27e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 110 PFHFWLPEVMQG-TSTTTALILVTWQKlAPLSLLMMTSQSL-NTPL----LLMLGLTSTLIGGWNGLNQTQLRKIMAFSS 183
Cdd:PRK12647 213 PFHFWLPNAMEApTPVSAYLHSATMVK-AGIYLLARLNPVLgGTPLwqtiLPLFGGLTMLTGALLAVRQTDLKLILAYST 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 184 IAHLGWMITILTLSPKLMLFTFYTYIIMTS----TMFLMIKLLK----TNKISTMMTSWTKLPTMNTLMMLTLMSLAGLP 255
Cdd:PRK12647 292 VSALGTLVMLLGLGSELAIKAAVLFLVAHSlykgALFMVAGIIDhetgTRDITKLGGLRRAMPITAAAALLAALSMAGLP 371
|
170
....*....|..
gi 5836004 256 PLTGFMPKWLIL 267
Cdd:PRK12647 372 PLFGFLAKELIY 383
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
19-270 |
2.95e-08 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 55.15 E-value: 2.95e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 19 LTISSNHWILAWTGLEISTLAIIPLVAKQHHPRATEAATKYFLTQATA------STLILFSSIINAWMLGQWDITQMSNN 92
Cdd:PRK08676 117 FAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNWTELAAH 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 93 T----------SCTILTTALAIKLGLAPFHFWLPEV-MQGTSTTTALILVTWQKLAPLSLLMMTSQSLNT-------PLL 154
Cdd:PRK08676 197 AsllspsvlgaSFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSgaaeqfsNVL 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 155 LMLGLTSTLIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKL----MLFTFYTYIIMTSTMFLMIKLLKTNKISTM 230
Cdd:PRK08676 277 IGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLalfwMLFHMLAHSLVKSGLFFSAGILHRQYRSDR 356
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 5836004 231 MTSWTKL----PTMNTLMMLTLMSLAGLPPLTGFMPKWLILQEL 270
Cdd:PRK08676 357 FDRIFDVfrlqPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQL 400
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
111-268 |
4.72e-08 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 54.58 E-value: 4.72e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 111 FHFWLPEVMQGTSTTTALILVTWQKLAPLsLLMMTSQSL--NTPLLLML----GLTSTLIGGWNGLNQTQLRKIMAFSSI 184
Cdd:MTH00032 244 LHTWLPDAMEGPTPVSALIHAATMVTAGV-FLMIRSFPLfeKAPLTLLIitifGALTAFFAATVGLVQNDLKKVIAYSTC 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 185 AHLGWMITILTL--SPKLMLFTFYTYIIMTSTMFL----MIKLLKTNK--ISTMMTSWTKLPTMNTLMMLTLMSLAGLPP 256
Cdd:MTH00032 323 SQLGYMVLIIGIegSHNVGLFHLVNHAFFKALLFLsagsVIHSTTVDEqdMRKMGGLIHSIPFTYTMMLIGSFSIMGLPY 402
|
170
....*....|..
gi 5836004 257 LTGFMPKWLILQ 268
Cdd:MTH00032 403 LTGFYSKDLILE 414
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
97-263 |
5.32e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 54.54 E-value: 5.32e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 97 ILTTALAiKLGLAPFHFWLPEVMQGTSTTTALI-----------LVTwqKLAPlsllMMTSQSLNTPLLLMLGLTSTLIG 165
Cdd:PRK12644 209 ILVGALS-KSAIVPFHFWLPGAMAAPTPVSAYLhaaamvkagiyLVA--RLAP----GFADVPVWRPTVLVLGLATMLLG 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 166 GWNGLNQTQLRKIMAFSSIAHLGWMITILTL-SPKLMLftfyTYIIMT-------STMFLMIKLLK----TNKISTMMTS 233
Cdd:PRK12644 282 GWRALRQHDLKLILAYGTVSQLGFLTVLVGIgTRDAAL----AGLAMLlahalfkAALFLVVGIIDhstgTRDIRKLSGL 357
|
170 180 190
....*....|....*....|....*....|
gi 5836004 234 WTKLPTMNTLMMLTLMSLAGLPPLTGFMPK 263
Cdd:PRK12644 358 GRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-296 |
6.38e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 53.97 E-value: 6.38e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 33 LEISTLAIIPLVAKQHHPRATEAATKYFLTQATASTLILFSSIINAWMLGQWDITQM--------SNNT---SCTILTTA 101
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMfliiqdlpTNRAiqiGVLFIMVG 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 102 LAIKLGLAPFHFWLpevMQGTSTTTALILVTWQKLAPLSL---------------LMMTSQSLNTpLLLMLGLTSTLIGG 166
Cdd:PRK12662 219 LFIKAALFPFHKWL---IQAYSEAPSFISVFFSGTSTKVMiyliirivydvfkanFVFTTLPFNN-VFMILAALAIVFGS 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 167 WNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLMLFTFYTYII----MTSTMFLMIKLLK----TNKISTMMTSWTKLP 238
Cdd:PRK12662 295 VLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVnhsiVKSALFMVSGSISyhfgTTKLEDCLNLWKSMP 374
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 5836004 239 TMNTLMMLTLMSLAGLPPLTGFMPKWLILQELTKQHMTIMATMMAMLSLLTLFFYLRV 296
Cdd:PRK12662 375 KITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKI 432
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
96-268 |
2.77e-07 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 52.02 E-value: 2.77e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 96 TILTTALAIKLGLAPFHFWLPEVMQGTSTTTALILV-TWQKLAPLSLLMMTSQ------SLNTPLLLMLGLTSTLIGGWN 168
Cdd:PRK07363 209 TGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGgVLAKLGTYGLLRFGLQlfpqtwSLVAPGLAIIGTISVIYGALS 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 169 GLNQTQLRKIMAFSSIAHLGWMITILTLSPKLMLF----TFYTYIIMTSTMFLMIKLLKT-------NKISTMMTSWTKL 237
Cdd:PRK07363 289 AIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLgavaQMISHGLILALLFHLVGIVERkvgtrdlDVLNGLMNPIRGL 368
|
170 180 190
....*....|....*....|....*....|.
gi 5836004 238 PTMNTLMMLTLMSLAGLPPLTGFMPKWLILQ 268
Cdd:PRK07363 369 PLTSALLVLAGMASAGIPGLVGFVAEFIVFQ 399
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
34-270 |
4.25e-07 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 51.66 E-value: 4.25e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 34 EISTLAIIPLVAKQHHPRATEAATKYFLTQATASTLILFSSIINAWML-GQWDITQMSNNT-----SCTILTTALAIKLG 107
Cdd:PRK08667 141 EIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQtGSFELSPLGASAgilslVFLLLFLGFGIKAG 220
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 108 LAPFHFWLPEVMQGT-STTTALILVTWQKLAPLSLLMMTSqSLNTP------LLLMLGLTSTLIGGWNGLNQTQLRKIMA 180
Cdd:PRK08667 221 IIPFHKWLPYAHPASpSNVSALMSGVMLKVAVYGLVRFLM-DVLSPelwwgvLILLAGSISALLGVIYALKEHDLKGLLA 299
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 181 FSSIAHLG--------WMI-------TILTLSPKLMLFTFYTYIIMTSTMFL----MIKLLKTNKISTMMTSWTKLPTMN 241
Cdd:PRK08667 300 YSSIENIGiilmgiglYVIfgvygldTLALLALGGALFHSLNHALFKSLLFLtagsVVHATGTRNIEKMGGLVKLMPYTS 379
|
250 260
....*....|....*....|....*....
gi 5836004 242 TLMMLTLMSLAGLPPLTGFMPKWLILQEL 270
Cdd:PRK08667 380 ALFLVGAVSIAALPPFNGFASELLLYESF 408
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
110-272 |
2.33e-06 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 49.37 E-value: 2.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 110 PFHFWLPEVMQGTSTTTALILVTWQKLAPLSLLMMTsqslnTPLL----------LMLGLTSTLIGGWNGLNQTQLRKIM 179
Cdd:PRK12646 228 PFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRF-----TPLLglsnmyiyivTFVGLITMLFGSITALKQWDLKGIL 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 180 AFSSIAHLGWMITI------LTLSPKLMLFTFYTYIIMTSTMFLMIKLL----------------KTNKISTMMTSWTKL 237
Cdd:PRK12646 303 AYSTISQLGMIMAMvgigggYAQHQQDAIASIYVFVLFAALFHLMNHAIfkcalfmgvgiidheaGTRDIRILSGMRQLF 382
|
170 180 190
....*....|....*....|....*....|....*
gi 5836004 238 PTMNTLMMLTLMSLAGLPPLTGFMPKWLILQELTK 272
Cdd:PRK12646 383 PKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQ 417
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
71-329 |
2.64e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 48.87 E-value: 2.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 71 LFSSIINAWMLGQWDITQMSNNTS-----CTILTTALAIKLGLAPFHFWLPEVMQGTSTTTALILVTWQKLAPLSLL--- 142
Cdd:MTH00209 149 LILSIAWMLMHGNWNIFYLNFNSNlgsviSVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLirf 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 143 --MMTSQSLNTPLLLMLGLTSTLIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTL-SPKLMLFTFYTYIIMTSTMFL-- 217
Cdd:MTH00209 229 fpSLFSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLnQPELAFFHLITHALFKALLFIca 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 218 --MI-KLLKTNKISTMMTSWTKLPTMNTLMMLTLMSLAGLPPLTGFMPKWLILQELTKQHMTIMATMMAMLSL-LTLFFY 293
Cdd:MTH00209 309 gnIIhSHGHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTsLTAAYS 388
|
250 260 270
....*....|....*....|....*....|....*.
gi 5836004 294 LRVSYYATITLPPNSTNYSQQWRHKNNQKPYLALLT 329
Cdd:MTH00209 389 MRLSYFSLWGPNSSKSLNSSFDQNKLNLKPMLVLTL 424
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-265 |
3.65e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 48.38 E-value: 3.65e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 101 ALAIKLGLAPFHFWLPEV-MQGTSTTTALILVTWQKLAPLSLLMMT-------SQSLnTPLLLMLGLTSTLIGGWNGLNQ 172
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSwpilplgAQNL-APAVIAMGIVGIVYGSFATCRQ 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 173 TQLRKIMAFSSIAHLGWM-ITILT---LSPKLMLFTFYTYIIMTSTMFLMIKLLKTNKISTMMTSWTKL----PTMNTLM 244
Cdd:MTH00226 318 IDVKRLVAYSSVAHMGLVsITLVThdiIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLsitmPIWGTIM 397
|
170 180
....*....|....*....|.
gi 5836004 245 MLTLMSLAGLPPLTGFMPKWL 265
Cdd:MTH00226 398 IVTSLANVAVPPSGNFIGEYL 418
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-272 |
5.70e-06 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 47.90 E-value: 5.70e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 107 GLAPFHFWLPEVMQGTSTTTALILVTW-QKLAPLSLLMMTSQSLNTPL-----LLMLGLTSTLIGGWNGLNQTQLRKIMA 180
Cdd:PRK08042 195 GIIPLHGWVPQAHANASAPAAALFSTVvMKIGLLGILTLSLLGGNAPLwwgvaLLVLGMITAFVGGLYALMEHNIQRLLA 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 181 FSSIAHLGWMIT--------ILTLSPKLM-------LFTFYTYIIMTSTMFLMIKLL----KTNKISTMMTSWTKLPTMN 241
Cdd:PRK08042 275 YHTLENIGIILLglgagvtgIALEQPALIalglvggLYHLLNHSLFKSVLFLGAGSVwfrtGHRDIEKLGGIGKKMPVIS 354
|
170 180 190
....*....|....*....|....*....|.
gi 5836004 242 TLMMLTLMSLAGLPPLTGFMPKWLILQELTK 272
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-188 |
6.29e-06 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 47.72 E-value: 6.29e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 55 AATKYFLTQATASTLILFSSIINAWMLGQ--WDITQMSNNTSCTILT--------TALAIKLGLAPFHFWLPEVMQGTST 124
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTftFDLAELGAKSYPLALElllyagflIAFGVKLPIFPLHTWLPDAHGEASA 217
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 5836004 125 TTALILV-TWQKLAPLSLLMMTSQSLN------TPLLLMLGLTSTLIGGWNGLNQTQLRKIMAFSSIAHLG 188
Cdd:PRK12561 218 PVSMILAgVLLKMGGYALIRFNVQMLPdahvyfAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMG 288
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-268 |
7.72e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 47.33 E-value: 7.72e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 34 EISTLAIIPLVAKQHHPRATEAATKYFLTQATASTLILFSSIINAWMLGQWDITQMSNN-----TSCTILTTALAIKLGL 108
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDIHNAllvnpTSPVIYGGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 109 A------PFHFWLPEVMQGTSTTTALILVTWQKLAPLSLLMMTSQSLNTP--------LLLMLGLTSTLIGGWNGLNQTQ 174
Cdd:PRK06277 210 LygsglpPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIFKLFGGLsyfpsaqgVLIALSVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 175 LRKIMAFSSIAHLGWMITILTLSPKLM----LFTFYTYIIMTSTMFLMIKLL----KTNKISTMMTSWTKLPTMNTLMML 246
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGivagIFHAINHVIYKSALFLGAGIVsyrtKTSNLRKLGGLLPVMPVVAFMVLC 369
|
250 260
....*....|....*....|..
gi 5836004 247 TLMSLAGLPPLTGFMPKWLILQ 268
Cdd:PRK06277 370 AKLAISGVPPFNGFQSKLMLAQ 391
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
80-267 |
8.85e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 47.53 E-value: 8.85e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 80 MLGQWDITQMSNN----TSCTILTTALAIKLGLAPFHFWLPEVMQGTSTTTALI----LVTwqklAPLSLL-----MMTS 146
Cdd:MTH00151 160 LLGHWSILSMWDFklsgWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVhsstLVT----AGVFLLirffpFLSS 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 147 QSLNTPLLLMLGLTSTLIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTL-SPKLMLFTFYTYIIMTSTMFL---MIKLL 222
Cdd:MTH00151 236 SSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLgMPSLALFHLYTHALFKALLFLcagSIIHS 315
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 5836004 223 KTNK--ISTMMTSWTKLPTMNTLMMLTLMSLAGLPPLTGFMPKWLIL 267
Cdd:MTH00151 316 SSGTqdIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLIL 362
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
55-267 |
1.01e-05 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 47.12 E-value: 1.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 55 AATKYFLTQATASTLILFSSI----INAWMLGQWDITQMSNNTSCTILTTAL--------AIKLGLAPFHFWLPEVMQGT 122
Cdd:PRK05846 162 AATKFFLYTLLGSLLMLVAIIylvvVYYNATGTFDIADLLNLPLPPGVQYWLflaffiafAVKMPMFPLHTWLPDAHVQA 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 123 STTTALILV-TWQKLAP-----LSLLMMTSQSLN-TPLLLMLGLTSTLIGGWNGLNQTQLRKIMAFSSIAHLGWMItilt 195
Cdd:PRK05846 242 PTAGSVLLAgILLKMGAygllrFSLPLFPDASHEfAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVT---- 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 196 lspkLMLFTFYT--------YII----MTSTMFLMI----KLLKTNKISTMMTSWTKLPTMNTLMMLTLMSLAGLPPLTG 259
Cdd:PRK05846 318 ----LGIFAGNQlgiqgaifQMIshglSSAALFLLVgvlyDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSG 393
|
....*...
gi 5836004 260 FMPKWLIL 267
Cdd:PRK05846 394 FVGEFLIL 401
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-340 |
2.44e-05 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 41.09 E-value: 2.44e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 5836004 291 FFYLRVSYYATITLPPNSTNYSQQWRHKNNQKPY-LALLTTLSISMLPITP 340
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTLlLPTLTTLSILLLPLTP 51
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
105-303 |
4.38e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 45.38 E-value: 4.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 105 KLGLapfHFWLPEVMQGTSTTTALILVTWQKLAPLsLLMMTSQSL--NTPLLL----MLGLTSTLIGGWNGLNQTQLRKI 178
Cdd:MTH00210 227 QLGL---HTWLPDAMEGPTPVSALIHAATMVTAGV-FLIIRSGPLfeGSPLALtivtILGALTAFFAATVGVVQNDLKKV 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 179 MAFSSIAHLGWMITILTLSP------KLMLFTFYTYIIMTSTMFLMIKLLKTNKISTMMTSWTKLPTMNTLMMLTLMSLA 252
Cdd:MTH00210 303 IAYSTCSQLGYMVMVCGISNystslfHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLM 382
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 5836004 253 GLPPLTGFMPKWLILQELTKQHMTIMATMMAMLS-LLTLFFYLRVSYYATIT 303
Cdd:MTH00210 383 GFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSaLLTAFYSIRLIYLTFIT 434
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
47-263 |
8.89e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 44.43 E-value: 8.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 47 QHHPRATEAATKYFLTQATASTLILFSSIINAWMLGQWDITQMSNNTSCT--------ILTTALAIKLGLA------PFH 112
Cdd:PRK12649 155 RHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIenikghplFLITLILIFIGAAaksaqgPFY 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 113 FWLPEVMQGTSTTTALILVTWQKLAPLSLLMMTSQSLN-TPLLLML----GLTSTLIGGWNGLNQTQLRKIMAFSSIAHL 187
Cdd:PRK12649 235 IWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSgTEAWFILvsgtGMITMVLAGFLAFRQTDIKAILAYSTISQL 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 188 GWMITILTLS----PKLML----FTFYTYIIMTSTMFLMIKLL----KTNKISTMMTSWTKLPTMNTLMMLTLMSLAGLP 255
Cdd:PRK12649 315 AYLMTMYGYTtyhePGLGVaaatFHLLNHATFKACLFLVAGIVaheaATRDIRKLGGLRKEMPITFIVASIAALAMAGIP 394
|
....*...
gi 5836004 256 PLTGFMPK 263
Cdd:PRK12649 395 PLNGFLSK 402
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
27-270 |
9.73e-05 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 44.01 E-value: 9.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 27 ILAWTGLEISTLAIIPLVAKQHHPRATeaatkyFLTQATASTLILFSSIINAWML-GQWDITQMSNNTSCTILTTALAIK 105
Cdd:PRK06459 98 LAGWEIMTIPSYVAIALTKKNKRPAFV------FMAFGELSTVLILAGFAWAFIIsGTTNFSYLPSPVPLILASFGFIIK 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 106 LGLAPFHF--WLPEVM-QGTSTTTALILVTWQKLAPLSLLMMTSQSLNTP------LLLMLGLTSTLIGGWNGLNQTQLR 176
Cdd:PRK06459 172 MGMMPFLVseWLPIAHgNAPSNFSAILSATMTLMGVYGILKMTILTQTIPigyfglTILAIGAFSILFGALYAYVSENVK 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 177 KIMAFSSIAHLGWMITIL----------TLSPKLMLFTFYTYIIMTST----MFLMIKLLKTNKISTMMTSWTKLPTMNT 242
Cdd:PRK06459 252 GLLAFSTIENNGAILVALglymvtkqliTSIEHFSLITVILYSFAHSVaktgLFLSSGLQEKQSITYSKKIRNRWIELGL 331
|
250 260
....*....|....*....|....*...
gi 5836004 243 LMMLtlMSLAGLPPLTGFMPKWLILQEL 270
Cdd:PRK06459 332 TLLA--SSLSGLLPNIGGVASWLLLESL 357
|
|
| ND2 |
MTH00091 |
NADH dehydrogenase subunit 2; Provisional |
102-272 |
1.35e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177154 Cd Length: 273 Bit Score: 42.94 E-value: 1.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 102 LAIKLGLAPFHFWLPEVMQGTSTTTALILVTWQKLAPLSLLMMTSqSLNTPLLLMLGLTSTLIGGWNGLNqtqLRKIMAF 181
Cdd:MTH00091 67 LMMKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKLPFLLVLLQFF-SKNFFFLLLFGLLICFFQMFLLKS---YKNLLIL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 182 SSIAHLGWMITILTLSpklMLFTFYTYIIMTSTMFLMIkllktnkistmmTSWTKLPTMNTLMMLTLMSLAGLPPLTGFM 261
Cdd:MTH00091 143 SSTESFNWLILSFFFS---FFNVFFLFFYYFLLMLFLI------------PKFNNVNKLNFVSWETLLVFMNLPFSVTFF 207
|
170
....*....|.
gi 5836004 262 PKWLILQELTK 272
Cdd:MTH00091 208 VKIFSLSEILK 218
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
33-295 |
1.38e-04 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 43.60 E-value: 1.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 33 LEISTLAIIPLVAKQHHPRATEAATKYFLTQATASTLILFSSIINAWMLGQW---DITQMSNNTSCTILTTALA-IKLGL 108
Cdd:PRK08377 137 MEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALIYGATGTLnmaHIAQLAGTIDPTVAQVGLAlLIFGL 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 109 A------PFHFWLPEVMQGTS---TTTALILVTWQKLAPLSLLMMTSQSLN-----TPLLLMLGLTSTLIGGWNGLNQTQ 174
Cdd:PRK08377 217 AveaelfPLNAWAPDAYQAAPhpiTVMFSAFVVKAGLYAMARILYLMQNANgwssvLKLVIIMATLTVFFAELSALRQKN 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 175 LRKIMAFSSIAHLGWMITILTLSPKL----MLFTFYTYIIMTSTMFL----MIKLLKTNKISTMMTSWTKLPTMNTLMML 246
Cdd:PRK08377 297 VKRMIAYSSIGQVGMIALALALGTQAgvdaGVFHMINHAIVKALLFLavgyVGITLGGTEIEKFEGLGKRMPLTALALTI 376
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 5836004 247 TLMSLAGLPPLTGFMPKWLILQELTKQHMTIMATMMAMLSLLTLFFYLR 295
Cdd:PRK08377 377 GALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGASVVEAVYYFR 425
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-300 |
3.63e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 42.24 E-value: 3.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 103 AIKLGLAPFHFWLPEVMQGTSTTTALI---LVT----WQKLAPLSLLMMTSQSLNTPLLLMLGLTSTLIGGWNGLNQTQL 175
Cdd:PRK07691 220 ATKAGLFPLYFWLPGSYYAPPIAIAALfgaLLTkvgvYAIARTFTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDI 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 176 RKIMAFSSIAHLGWMIT-ILTLSPKLMLFTFYTYI---IMTSTMFL----MIKLLKTNKISTMMTSWTKLPTMNTLMMLT 247
Cdd:PRK07691 300 KKIIIYNIMIAVGVILVgVAMMTESGMIGAIYYLIhdmIVKAALFLligiMIKITGTTDLKKMGGLIKRYPVLGWMFFIA 379
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 5836004 248 LMSLAGLPPLTGFMPKWLILQELTKQHMTIMATMMAMLSLLTLFFYLRVSYYA 300
Cdd:PRK07691 380 ALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKIFLKG 432
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
9-299 |
4.03e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 42.08 E-value: 4.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 9 IILSLIMGPLLTISSNHWILAWTGLEISTLAIIPLVAKQHHPRATEAATKYFLTQATASTLILFSS---IINAWMLGQWD 85
Cdd:PRK06591 120 ILLFAHTGYLGMIATNDFFNLYVFIEISALSSYVLIASGNNPKSLIGAFDYLIMGSIGATLILIAIgflLSITGSLNMTD 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 86 I-TQMSNNTSCTILTTALA-------IKLGLAPFHFWLpevMQGTSTTTALILVTwqkLAPLSLLM-------------- 143
Cdd:PRK06591 200 IaAYLQEHTNSRIITIAIGffligaiLKTAFFPMHFWM---MRAYNNTASVILVY---LAGISTIIgiyiiykftyiiig 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 144 -MTSQSLNTPLLLMLGLTSTLIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLMLFTFYTYIIMTSTMFLMIkll 222
Cdd:PRK06591 274 yETIKTAITNFIRPIALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYVFLLYVTENGIIILPSLLLADSINKIALFL--- 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 5836004 223 ktnkISTMMTSWTKLPtMNTLMMLTLMSLAGLPPLTGFMPKWLILQELTKQHMTIMATMMAMLSLLTLFFYLRVSYY 299
Cdd:PRK06591 351 ----IDAYNESYKREP-NKVLIIIAIICSCGLPISPLFFIKVNILELLLTQNLLLDFIIILLSSVGSLFYHYKMVLL 422
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-191 |
1.41e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 40.46 E-value: 1.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 55 AATKYFLTQATASTLILFSSIINAWM----------LGQWDITQMSNNTSCTILTTALAIKLGLAPFHFWLPEVmQGTST 124
Cdd:PRK02546 166 AATKFILYTAGSSLFILLAALAMAFYgdtptfdmtaLAAKDFGLGFQLLCYAGLLIAYGVKLPIVPLHTWLPDA-HGEAT 244
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 5836004 125 TTALILVT--WQKLAPLSLLMMTSQSLN------TPLLLMLGLTSTLIGGWNGLNQTQLRKIMAFSSIAHLGWMI 191
Cdd:PRK02546 245 APVHMLLAgiLLKMGGYALLRMNAGMLPdahaqfAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL 319
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-273 |
3.74e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 39.03 E-value: 3.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 11 LSLIMGPLLTISSNhWILAWTGLEISTLAIIPLVAKQHHPRATEAATKYFLTQATASTLILFSSIINAWM-LGQWDITQM 89
Cdd:PRK06589 124 LTILIGVLIALSSD-LFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTkTGNLDFVSG 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 90 SNNTSCTILTTALAIKLGLA-----PFHFWLPEVMQGTSTTTAL----ILVTWQKLAPLSLLMMTSQSLNTPLLLMLGLT 160
Cdd:PRK06589 203 GLFSKNQSIILLLMFIYGIAktaifPVHSWLPAAMVAHYPVSALlhavIVVKTGLFCIYKILLYIFGLSYLQRIFAEFNW 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 161 STLIGGWN-------GLNQTQLRKIMAFSSIAHLGWMI-TILTLSPKLM---LFTFYTYIIMTSTMFL----MIKLLKTN 225
Cdd:PRK06589 283 LIFIPIVSifysslkALKTDNIKKILAYSTISQLSLALlSAFILTPKALgaaILHLVSHSFAKICLFYsmgsIYSLKKED 362
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 5836004 226 KISTMMTSWTKLPTMNTLMMLTLMSLAGLPPLTGFMPKWLILQELTKQ 273
Cdd:PRK06589 363 QVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQ 410
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
86-300 |
4.07e-03 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 38.78 E-value: 4.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 86 ITQMSNNTSCTILT----TALAIKLGLAPFhFWLPEVMQGTSTTTALI---LVT----WQKLAPLSLLMMTSQSLNTPLL 154
Cdd:PRK12663 197 LNDMGDTATLTTIAllflLAFGMKAALFPF-MWLPAAYHTPNTEVAALfaaLLTkvgiYALIRVFTLLFPQERELLHPLL 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 155 LMLGLTSTLIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLML-----FTFYTYIIMTSTMFL---MIKLLKTNK 226
Cdd:PRK12663 276 ATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALGTPAGIngaifYLVHDMVVKTALFLIagsLVRLTGYRS 355
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 5836004 227 ISTMMTSWTKLPTMNTLMMLTLMSLAGLPPLTGFMPKWLILQELTKQHMTIMATMMAMLSLLTLFFYLRVSYYA 300
Cdd:PRK12663 356 LQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSLFRIFFLA 429
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
70-267 |
9.97e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 37.62 E-value: 9.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 70 ILFSSIINAWMLGQWDITQMSNNTSCTILTTALAIKLGLA-----PFHFWLPEVMQGTSTTTALI----LVT-----WQK 135
Cdd:MTH00211 177 LLLSMVWLLLNLNSWEISQLFILNLDLTLFLLGLLLAAMGksaqfGFHPWLPSAMEGPTPVSALLhsstMVVagvflLIR 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 5836004 136 LAPLSLLMMTSQSLntplLLMLGLTSTLIGGWNGLNQTQLRKIMAFSSIAHLGWMITILTLSPKLMLFT-------FYTY 208
Cdd:MTH00211 257 LSPLFQNNQLILGA----VLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLhicthafFKAM 332
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 5836004 209 IIMTSTMFLMiKLLKTNKISTMMTSWTKLPTMNTLMMLTLMSLAGLPPLTGFMPKWLIL 267
Cdd:MTH00211 333 LFMCSGSIIH-GLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLIL 390
|
|
| |
