|
Name |
Accession |
Description |
Interval |
E-value |
| PTZ00139 |
PTZ00139 |
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional |
40-664 |
0e+00 |
|
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional
Pssm-ID: 240286 [Multi-domain] Cd Length: 617 Bit Score: 1147.17 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 40 NKRASAKVSDSISAQYPVVDHEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNW 119
Cdd:PTZ00139 8 NRLTRTFFSGHLSSAYPVIDHTYDAVVVGAGGAGLRAALGLVELGYKTACISKLFPTRSHTVAAQGGINAALGNMTEDDW 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 120 RWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKFGKGGQAHRCCCVADRTGHS 199
Cdd:PTZ00139 88 RWHAYDTVKGSDWLGDQDAIQYMCREAPQAVLELESYGLPFSRTKDGKIYQRAFGGQSLKFGKGGQAYRCAAAADRTGHA 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 200 LLHTLYGRSLRYDTSYFVEYFALDLLM-ENGECRGVIALCIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTA 278
Cdd:PTZ00139 168 MLHTLYGQSLKYDCNFFIEYFALDLIMdEDGECRGVIAMSMEDGSIHRFRAHYTVIATGGYGRAYFSCTSAHTCTGDGGA 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 279 MITRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCG 358
Cdd:PTZ00139 248 MVSRAGLPLQDLEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRAMTIEILEGRGCG 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 359 PEKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVLRHVNG-QDQIVPGLYA 437
Cdd:PTZ00139 328 PNKDHIYLDLTHLPPETLHERLPGISETAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNWKTQVLTQRNGdDDKIVPGLLA 407
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 438 CGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDKVPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQK 517
Cdd:PTZ00139 408 AGEAACASVHGANRLGANSLLDIVVFGRAAANTVMEILKPGRPQPDLPKDAGEASIARLDKIRHNKGDISTAQIRKRMQR 487
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 518 SMQNHAAVFRVGSVLQEGCGKISKLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDY 597
Cdd:PTZ00139 488 TMQKHAAVFRIGESLQEGVEKIKEIYSDFKDVKIKDKSLVWNTDLIETLELENLLTQAKQTILSAEARKESRGAHARDDF 567
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 156416003 598 KVRIDeydyskpiqgqqkkpfeEHWRKHTLSYV-DVGTGKVTLEYRPVIDKTLNEaDCATVPPAIRSY 664
Cdd:PTZ00139 568 PERDD-----------------KNWMKHTLSYIrDVKKGKVRLTYRPVITTPLDN-EMETVPPAKRVY 617
|
|
| sdhA_forward |
TIGR01816 |
succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; Succinate ... |
80-664 |
0e+00 |
|
succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; Succinate dehydrogenase and fumarate reductase are homologous enzymes reversible in principle but favored under different circumstances. This model represents a narrowly defined clade of the succinate dehydrogenase flavoprotein subunit as found in mitochondria, in Rickettsia, in E. coli and other Proteobacteria, and in a few other lineages. However, this model excludes all known fumarate reductases. It also excludes putative succinate dehydrogenases that appear to diverged before the split between E. coli succinate dehydrogenase and fumarate reductase. [Energy metabolism, TCA cycle]
Pssm-ID: 130875 [Multi-domain] Cd Length: 565 Bit Score: 1071.31 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 80 LSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMP 159
Cdd:TIGR01816 1 LAKGGVNTACVTKLFPTRSHTVAAQGGISAALGNMEEDNWRWHMYDTVKGSDWLGDQDAIEYMCKQAPEAVLELEHMGMP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 160 FSRTEDGKIYQRAFGGQSLKFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCI 239
Cdd:TIGR01816 81 FSRTEDGKIYQRPFGGHTRDFGKGGAAERACAAADRTGHAILHTLYQQNLKADTSFFNEYFALDLLMEDGECRGVIAYCL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 240 EDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILI 319
Cdd:TIGR01816 161 ETGEIHRFRAKAVVLATGGYGRIYFSTTNAHTLTGDGTGMVTRAGLPLQDMEFVQFHPTGIAGAGCLITEGCRGEGGILI 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 320 NSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPEKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEP 399
Cdd:TIGR01816 241 NANGERFMERYAPTAKDLASRDVVSRSMTLEIREGRGVGPNKDHVYLDLDHLGPEVLEGRLPGISETARTFAGVDPVKDP 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 400 IPVLPTVHYNMGGIPTNYKGQVLRHVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGD 479
Cdd:TIGR01816 321 IPVLPTVHYNMGGIPTNYHGQVLRDGNGNDQIVPGLYAAGEAACVSVHGANRLGTNSLLDLVVFGRAAGLSAAEYAKPGS 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 480 KVPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKISKLYGDLKHLKTFDRGMVWN 559
Cdd:TIGR01816 401 DVKPMPPNAGEESVMRLDKLRFATGGERVAALRLELQRSMQNHAGVFRTGEVLQKGVEKISALKERYKNVKINDKSKVWN 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 560 TDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRIDeydyskpiqgqqkkpfeEHWRKHTLSYVDVGTGKVTL 639
Cdd:TIGR01816 481 TDLVEALELQNLLECAEATAVSAEARKESRGAHAREDFPERDD-----------------ENWLKHTLSYVDINTGKVLL 543
|
570 580
....*....|....*....|....*
gi 156416003 640 EYRPVIDKTLNEADCAtvpPAIRSY 664
Cdd:TIGR01816 544 SYKPVIFKPLTVADFE---PKKRVY 565
|
|
| PLN00128 |
PLN00128 |
Succinate dehydrogenase [ubiquinone] flavoprotein subunit |
9-664 |
0e+00 |
|
Succinate dehydrogenase [ubiquinone] flavoprotein subunit
Pssm-ID: 177739 [Multi-domain] Cd Length: 635 Bit Score: 1048.68 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 9 RLLSARRLALAKAWPTVLQTGTrgfhftVDGNKRASAKVSDSISAQYPVVDHEFDAVVVGAGGAGLRAAFGLSEAGFNTA 88
Cdd:PLN00128 4 RCVARGLRLLASSSASSSLASA------SLRTALSRFFSTGGGRSSYTIVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTA 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 89 CVTKLFPTRSHTVAAQGGINAALGNMEEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKI 168
Cdd:PLN00128 78 CITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKI 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 169 YQRAFGGQSLKFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMEN-GECRGVIALCIEDGSIHRI 247
Cdd:PLN00128 158 YQRAFGGQSLDFGKGGQAYRCACAADRTGHAMLHTLYGQAMKHNTQFFVEYFALDLIMDSdGACQGVIALNMEDGTLHRF 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 248 RAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILINSQGERFM 327
Cdd:PLN00128 238 RAHSTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFM 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 328 ERYAPVAKDLASRDVVSRSMTLEIREGRGCGPEKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVH 407
Cdd:PLN00128 318 ERYAPTAKDLASRDVVSRSMTMEIREGRGVGPEKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVH 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 408 YNMGGIPTNYKGQVLR-HVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDKVPPIKP 486
Cdd:PLN00128 398 YNMGGIPTNYHGEVVTiKGDDPDAVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIAKPGEKQKPLPK 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 487 NAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKISKLYGDLKHLKTFDRGMVWNTDLVETL 566
Cdd:PLN00128 478 DAGEKTIAWLDKLRNANGSLPTSKIRLNMQRVMQNNAAVFRTQETLEEGCKLIDEAWDSFHDVKVTDRSLIWNSDLIETL 557
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 567 ELQNLMLCALQTIYGAEARKESRGAHAREDYKVRIDeydyskpiqgqqkkpfeEHWRKHTLSYVDvgTGKVTLEYRPVID 646
Cdd:PLN00128 558 ELENLLINACITMHSAEARKESRGAHAREDFTKRDD-----------------ENWMKHTLGYWE--EGKVRLDYRPVHM 618
|
650
....*....|....*...
gi 156416003 647 KTLNEaDCATVPPAIRSY 664
Cdd:PLN00128 619 NTLDD-EVETFPPKARVY 635
|
|
| sdhA_frdA_Gneg |
TIGR01812 |
succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial ... |
82-664 |
0e+00 |
|
succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup; This model represents the succinate dehydrogenase flavoprotein subunit as found in Gram-negative bacteria, mitochondria, and some Archaea. Mitochondrial forms interact with ubiquinone and are designated EC 1.3.5.1, but can be degraded to 1.3.99.1. Some isozymes in E. coli and other species run primarily in the opposite direction and are designated fumarate reductase. [Energy metabolism, Aerobic, Energy metabolism, Anaerobic, Energy metabolism, TCA cycle]
Pssm-ID: 273815 [Multi-domain] Cd Length: 566 Bit Score: 783.44 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 82 EAGFNTACVTKLFPTRSHTVAAQGGINAALGNME-EDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPF 160
Cdd:TIGR01812 20 KAGLNTAVISKVYPTRSHTVAAQGGMAAALGNVDpDDSWEWHAYDTVKGSDYLADQDAVEYMCQEAPKAILELEHWGVPF 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 161 SRTEDGKIYQRAFGGQSLKfgkggqahRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIE 240
Cdd:TIGR01812 100 SRTPDGRIAQRPFGGHSKD--------RTCYAADKTGHALLHTLYEQCLKLGVSFFNEYFALDLIHDDGRVRGVVAYDLK 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 241 DGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILIN 320
Cdd:TIGR01812 172 TGEIVFFRAKAVVLATGGYGRIYKTTTNAHINTGDGMAMALRAGVPLKDMEFVQFHPTGLYPSGILITEGCRGEGGYLVN 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 321 SQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCG-PEKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEP 399
Cdd:TIGR01812 252 KNGERFMERYAPEKMELAPRDVVSRAMWTEIREGRGVGsPPGDYVYLDLRHLGEEKIEERLPQIRELAKYFAGVDPVKEP 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 400 IPVLPTVHYNMGGIPTNYKGQVLRhvngqDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESC-RPG 478
Cdd:TIGR01812 332 IPVRPTAHYSMGGIPTDYTGRVIC-----ETIVKGLFAAGECACVSVHGANRLGGNSLLELVVFGRIAGEAAAEYAaKTG 406
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 479 DKVPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKISKLYGDLKHLKTFDRGMVW 558
Cdd:TIGR01812 407 NPAADIEEEAVKAEEALIDLLVESNGGERVAKIREELGDTMDDNVGIFRTEELLKKAVDEIEELRERYKNVRINDKSKVF 486
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 559 NTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRIDeydyskpiqgqqkkpfeEHWRKHTLSYVDvGTGKVT 638
Cdd:TIGR01812 487 NTDLLEALELGNMLDLAEVVAAGALNRKESRGAHAREDYPERDD-----------------ENWLKHTLAYYD-NPGTPR 548
|
570 580
....*....|....*....|....*.
gi 156416003 639 LEYRPVidktlneaDCATVPPAIRSY 664
Cdd:TIGR01812 549 LEYKPV--------TITKYEPAERKY 566
|
|
| sdhA |
PRK05945 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
85-645 |
0e+00 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 180319 [Multi-domain] Cd Length: 575 Bit Score: 552.42 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 85 FNTACVTKLFPTRSHTVAAQGGINAALGNME-EDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRT 163
Cdd:PRK05945 29 LDVAVVAKTHPIRSHSVAAQGGIAASLKNVDpEDSWEAHAFDTVKGSDYLADQDAVAILTQEAPDVIIDLEHLGVLFSRL 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 164 EDGKIYQRAFGGQSLKfgkggqahRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGS 243
Cdd:PRK05945 109 PDGRIAQRAFGGHSHN--------RTCYAADKTGHAILHELVNNLRRYGVTIYDEWYVMRLILEDNQAKGVVMYHIADGR 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 244 IHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILINSQG 323
Cdd:PRK05945 181 LEVVRAKAVMFATGGYGRVFNTTSNDYASTGDGLAMTAIAGLPLEDMEFVQFHPTGLYPVGVLISEAVRGEGAYLINSEG 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 324 ERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPE----KDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEP 399
Cdd:PRK05945 261 DRFMADYAPSRMELAPRDITSRAITLEIRAGRGINPDgsagGPFVYLDLRHMGKEKIMSRVPFCWEEAHRLVGVDAVTEP 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 400 IPVLPTVHYNMGGIPTNYKGQVLRHVngqDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRpGD 479
Cdd:PRK05945 341 MPVRPTVHYCMGGIPVNTDGRVRRSA---DGLVEGFFAAGECACVSVHGANRLGSNSLLECVVYGRRTGAAIAEYVQ-GR 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 480 KVPPIKPNAG-EESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKISKLYGDLKHLKTFDRGMVW 558
Cdd:PRK05945 417 KLPEVDEQRYlKEAKQRIQALLDQSGTYRINQLRQQFQDCMTDHCGVFRTEEIMQEGLEKIQQLKQQYEQIYLDDKGKCW 496
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 559 NTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRIDeydyskpiqgqqkkpfeEHWRKHTLSYVDvgTGKVT 638
Cdd:PRK05945 497 NTELIEALELRSLMVVGEIILTSALNRQESRGAHSREDYPQRDD-----------------QNFLKHTLAYYS--PAGID 557
|
....*..
gi 156416003 639 LEYRPVI 645
Cdd:PRK05945 558 IQYMPVV 564
|
|
| sdhA |
PRK06069 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
81-647 |
0e+00 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 235689 [Multi-domain] Cd Length: 577 Bit Score: 538.49 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 81 SEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPF 160
Cdd:PRK06069 28 SGGKLSVAVVSKTQPMRSHSVSAEGGTAAVLYPEKGDSFDLHAYDTVKGSDFLADQDAVEVFVREAPEEIRFLDHWGVPW 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 161 SRTEDGKIYQRAFGGQSLKfgkggqahRCCCVADRTGHSLLHTLYGRSLRYDTSYFV-EYFALDLLMENGECRGVIALCI 239
Cdd:PRK06069 108 SRRPDGRISQRPFGGMSFP--------RTTFAADKTGFYIMHTLYSRALRFDNIHFYdEHFVTSLIVENGVFKGVTAIDL 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 240 EDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILI 319
Cdd:PRK06069 180 KRGEFKVFQAKAGIIATGGAGRLYGFTTYAHSVTGDGLAIAYRAGIPLKDMEFVQFHPTGLVPSGILITEAARGEGGYLI 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 320 NSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPEKD--HVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTK 397
Cdd:PRK06069 260 NKEGERFMKRYAPQKMELAPRDVVSRAIMTEIMEGRGFKHESGlcYVGLDLRHLGEEKINERLPLIREIAKKYAGIDPVT 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 398 EPIPVLPTVHYNMGGIPTNYKGQVLRHvngQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGR-----ACALSIE 472
Cdd:PRK06069 340 EPIPVRPAAHYTMGGIHTDVYGRVLTA---DGEWVRGLWAAGEAAAVSVHGANRLGSNSTAECLVWGRiageqAAEYALK 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 473 escRPGDKVPPIKPNAGEESVMnLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKISKLYGDLKHLKTF 552
Cdd:PRK06069 417 ---RPAPSSPVEKLAEKEEKRI-FDKLLKKEGGEPSYEIRRELNDIMDKNFGIFRDESGLAEALKKIKKLRERYKNVRIE 492
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 553 DRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRIDeydyskpiqgqqkkpfeEHWRKHTLSYVDV 632
Cdd:PRK06069 493 DKSRIYNTDLKDALELDGMLDLAEVVAIGALLRTESRGAHYRLDYPKRDD-----------------ENWLKHTLAYYTG 555
|
570
....*....|....*.
gi 156416003 633 GTGKVTleYRPV-IDK 647
Cdd:PRK06069 556 GGPKVT--YTPVtITK 569
|
|
| PRK09231 |
PRK09231 |
fumarate reductase flavoprotein subunit; Validated |
88-664 |
3.43e-164 |
|
fumarate reductase flavoprotein subunit; Validated
Pssm-ID: 236421 [Multi-domain] Cd Length: 582 Bit Score: 483.37 E-value: 3.43e-164
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 88 ACVTKLFPTRSHTVAAQGGinAALGNMEEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGK 167
Cdd:PRK09231 33 ALISKVYPMRSHTVAAEGG--SAAVAQDHDSFDYHFHDTVAGGDWLCEQDVVEYFVHHCPTEMTQLEQWGCPWSRKPDGS 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 168 IYQRAFGGQSLKfgkggqahRCCCVADRTGHSLLHTLYGRSLRYDTSY-FVEYFALDLLMENGECRGVIALCIEDGSIHR 246
Cdd:PRK09231 111 VNVRRFGGMKIE--------RTWFAADKTGFHMLHTLFQTSLKYPQIQrFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQ 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 247 IRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGILINSQGERF 326
Cdd:PRK09231 183 IRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAYRHGVPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKDGYRY 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 327 MERYA-----PVAK------DLASRDVVSRSMTLEIREGRGC-GPEKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVD 394
Cdd:PRK09231 263 LQDYGlgpetPLGEpknkymELGPRDKVSQAFWHEWRKGNTIsTPRGDVVYLDLRHLGEKKLHERLPFICELAKAYVGVD 342
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 395 VTKEPIPVLPTVHYNMGGIPTNykgqvlrhVNGQDQIvPGLYACGEAACASVHGANRLGANSLLDLVVFGRACAlsiEES 474
Cdd:PRK09231 343 PVKEPIPVRPTAHYTMGGIETD--------QNCETRI-KGLFAVGECSSVGLHGANRLGSNSLAELVVFGRVAG---EQA 410
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 475 CRPGDKVPPIKPNA----GEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKISKLYGDLKHLK 550
Cdd:PRK09231 411 AERAATAGPGNEAAldaqAADVEQRLKALVNQEGGENWAKIRDEMGLSMEEGCGIYRTPELMQKTIDKLAELKERFKRVR 490
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 551 TFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHARED--YKVRIDeydyskpiqgqqkkpfeEHWRKHTLS 628
Cdd:PRK09231 491 ITDTSSVFNTDLLYTIELGYGLDVAECMAHSALARKESRGAHQRLDegCTERDD-----------------VNFLKHTLA 553
|
570 580 590
....*....|....*....|....*....|....*..
gi 156416003 629 YVDvGTGKVTLEYRPV-IDKTlneadcatvPPAIRSY 664
Cdd:PRK09231 554 FYN-ADGTPRIEYSDVkITKS---------PPAKRVY 580
|
|
| NadB |
COG0029 |
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ... |
80-597 |
1.29e-152 |
|
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis
Pssm-ID: 439800 [Multi-domain] Cd Length: 521 Bit Score: 451.48 E-value: 1.29e-152
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 80 LSEAGfNTACVTKLFPTRSHTVAAQGGINAALGnmEEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMP 159
Cdd:COG0029 23 LAERG-RVTLLTKGELGESNTRWAQGGIAAVLD--PGDSPELHIADTLAAGAGLCDPEAVRVLVEEGPERIRELIELGVP 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 160 FSRTEDGKIYQRAFGGQSlkfgkggqAHRCCCVADRTGHSLLHTLYGRSLRYDT-SYFVEYFALDLLME-NGECRGVIAL 237
Cdd:COG0029 100 FDRDEDGELALTREGGHS--------RRRILHAGDATGREIERALLEAVRAHPNiTVLENHFAVDLITDaDGRCVGAYVL 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 238 CIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGC---LITEGCRGE 314
Cdd:COG0029 172 DEKTGEVETIRAKAVVLATGGAGQLYAYTTNPDVATGDGIAMAYRAGARLADMEFVQFHPTALYHPGApsfLISEAVRGE 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 315 GGILINSQGERFMERYAPVAkDLASRDVVSRSMTLEIREGRGcgpekDHVYLQLHHLPPEQLATRLPGISETAMIFaGVD 394
Cdd:COG0029 252 GAVLRNADGERFMPDYHPRA-ELAPRDVVARAIDAEMKKTGG-----DCVYLDISHLDAEFIRERFPTIYARCLEL-GID 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 395 VTKEPIPVLPTVHYNMGGIPTNykgqvlrhVNGQ-DqiVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEE 473
Cdd:COG0029 325 ITKEPIPVAPAAHYTMGGVATD--------LDGRtS--IPGLYAVGEVACTGVHGANRLASNSLLEGLVFGRRAAEDIAA 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 474 SCRPGDKVPPIKpnAGEESVMNldklrfADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKISKLYGDLKHLKTFd 553
Cdd:COG0029 395 RLAESPLPPEIP--EWDESVTD------PDEEVLIAHLRDELRRLMWDYVGIVRTAKGLERALRRLELLREEIEEYANF- 465
|
490 500 510 520
....*....|....*....|....*....|....*....|....
gi 156416003 554 rgmvwnTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDY 597
Cdd:COG0029 466 ------RVSRDLLELRNLLLVAELIVRAALARKESRGAHYRSDY 503
|
|
| sdhA |
PRK06452 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
80-644 |
2.94e-144 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 180567 [Multi-domain] Cd Length: 566 Bit Score: 431.62 E-value: 2.94e-144
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 80 LSEAGFNTACVTKLFPTRSHTVAAQGGINAAL-GNME-EDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYG 157
Cdd:PRK06452 24 IASAGFKVAVISKVFPTRSHSAAAEGGIAAYIpGNSDpNDNPDYMTYDTVKGGDYLVDQDAAELLSNKSGEIVMLLERWG 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 158 MPFSRTEDGKIYQRAFGGQSLKfgkggqahRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIAL 237
Cdd:PRK06452 104 ALFNRQPDGRVAVRYFGGQTYP--------RTRFVGDKTGMALLHTLFERTSGLNVDFYNEWFSLDLVTDNKKVVGIVAM 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 238 CIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGCLITEGCRGEGGI 317
Cdd:PRK06452 176 QMKTLTPFFFKTKAVVLATGGMGMLYRHTTNSYINTGDGFGIALRAGAALKDPEFVQFHPTALYPSDVLISEAARGEGGI 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 318 LINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGCgpEKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTK 397
Cdd:PRK06452 256 LKNVKGERFMTKYAPKKLDLAPRDIVSRAIITEIREGRGF--PGGYVGLDLTHLGEEYIKERLALAVEAAKSFAGVDAFT 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 398 EPIPVLPTVHYNMGGIPTNykgqvlrhVNGQDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRP 477
Cdd:PRK06452 334 EPIPVRPAQHYYMGGIDVD--------IDGRNPDIVGLFSAGEAACVSVHGANRLGSNSLLDTLVFGQVTGRTVVQFLKS 405
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 478 GDKVPPIK-PNAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKISKLYGDLKHLKTFDRGM 556
Cdd:PRK06452 406 NPGNPTSNyEKEAEKVVDDAYKFVKSESGVHFGQILEKLRDTMWDYVGIYRDEGGLLNAMSEINKLRGMISNMYVTDKSK 485
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 557 VWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRIDeydyskpiqgqqkkpfeEHWRKHTLSYVDVGTGK 636
Cdd:PRK06452 486 VYNTEFFNALELRNMLDLALVIAKSALERKESRGAHYRTDYPDRDD-----------------NNWLKHTIAYLRGNTVE 548
|
....*...
gi 156416003 637 VTleYRPV 644
Cdd:PRK06452 549 VT--FKPV 554
|
|
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
80-471 |
2.95e-140 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 416.93 E-value: 2.95e-140
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 80 LSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNME----EDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELEN 155
Cdd:COG1053 22 AAEAGLKVLVLEKVPPRGGHTAAAQGGINAAGTNVQkaagEDSPEEHFYDTVKGGDGLADQDLVEALAEEAPEAIDWLEA 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 156 YGMPFSRTEDGKIYQraFGGQSlkfgkggqAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVI 235
Cdd:COG1053 102 QGVPFSRTPDGRLPQ--FGGHS--------VGRTCYAGDGTGHALLATLYQAALRLGVEIFTETEVLDLIVDDGRVVGVV 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 236 ALCiEDGSIHRIRAKNTVVATGGYGRTY------------FSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGA 303
Cdd:COG1053 172 ARD-RTGEIVRIRAKAVVLATGGFGRNYemraeylpeaegALSTNAPGNTGDGIAMALRAGAALADMEFVQFHPTGLPGD 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 304 GCLITEGCRG-EGGILINSQGERFMERYAPvakdlasRDVVSRSMTLEIREG------------------RGCGPEKDHV 364
Cdd:COG1053 251 GGLISEGARGkPGGILVNKEGERFMNEYAP-------RDVVSRAILEEIDEPaylvldlrhrrrleeyleAGYLVKADTI 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 365 ylqlhhlppEQLATRLpGISETAMIF----------AGVDVTKE-----------PIPVLPTVHYNMGGIPTNYKGQVLR 423
Cdd:COG1053 324 ---------EELAAKL-GIDAAELAAtvarynaaakAGVDPRGTclgpikegpfyAIPVRPGVHYTMGGLRVDADARVLD 393
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 156416003 424 hvnGQDQIVPGLYACGEAaCASVHGANRLGANSLLDLVVFGRACALSI 471
Cdd:COG1053 394 ---ADGTPIPGLYAAGEA-AGSVHGANRLGGNSLGDALVFGRIAGRHA 437
|
|
| PRK08626 |
PRK08626 |
fumarate reductase flavoprotein subunit; Provisional |
82-664 |
1.35e-137 |
|
fumarate reductase flavoprotein subunit; Provisional
Pssm-ID: 181507 [Multi-domain] Cd Length: 657 Bit Score: 417.46 E-value: 1.35e-137
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 82 EAGFNTACVTKLFPTRSHTVAAQGGINAALGN--MEE-DNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGM 158
Cdd:PRK08626 26 QRGLDTIVLSLVPAKRSHSAAAQGGMQASLGNavKGEgDNEDVHFADTVKGSDWGCDQEVARMFVHTAPKAVRELAAWGV 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 159 PFSR-----------------TED----GKIYQRAFGGQSlKFgkggqahRCCCVADRTGHSLLHTLYGRSLRYDTSYFV 217
Cdd:PRK08626 106 PWTRvtagprtvvingekvtiTEKeeahGLINARDFGGTK-KW-------RTCYTADGTGHTMLYAVDNEAIKLGVPVHD 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 218 EYFALDLLMENGECRGVIALCIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGL-PCQDLEFVQFH 296
Cdd:PRK08626 178 RKEAIALIHDGKRCYGAVVRCLITGELRAYVAKATLIATGGYGRIYKVTTNAVICEGIGAAIALETGVaPLGNMEAVQFH 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 297 PTGIYGAGCLITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTLEIREGRGC-GPEKDHVYLQLHHLPPEQ 375
Cdd:PRK08626 258 PTAIVPSGILVTEGCRGDGGLLRDKDGYRFMPDYEPEKKELASRDVVSRRMTEHIRKGKGVkSPYGPHLWLDIRILGRKH 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 376 LATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVlrhvngqdQIVPGLYACGEAACASVHGANRLGAN 455
Cdd:PRK08626 338 IETNLREVQEICENFLGIDPAKDWIPVRPTQHYSMGGIRTNPTGES--------YGLKGLFSAGEAACWDMHGFNRLGGN 409
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 456 SLLDLVVFGRACALSIEESCRPGDKVppIKPNAGEESVMN----LDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSV 531
Cdd:PRK08626 410 SLAETVVAGMIVGKYVADFCLGNELE--IDTALVEKFVKKqqdrIDELIAGEGKENVFEIKNEMQEIMMEKVGIFRNGPE 487
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 532 LQEGCGKISKLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRIDeydyskpiq 611
Cdd:PRK08626 488 LEKAVKELQELLERSKNIGLKSKKRGANPELEEALRVPRMLKLALCVAYGALARTESRGAHAREDYPKRND--------- 558
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....
gi 156416003 612 gqqkkpfeEHWRKHTLSY-VDVGTGKVTLEYRPViDKTLNEadcatVPPAIRSY 664
Cdd:PRK08626 559 --------RDWLNRTLASwPEGEALEPTLEYEPL-DVMKME-----LPPGFRGY 598
|
|
| sdhA |
PRK06263 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
100-604 |
6.92e-134 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 235758 [Multi-domain] Cd Length: 543 Bit Score: 403.98 E-value: 6.92e-134
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 100 TVAAQGGINAALGnmEEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLK 179
Cdd:PRK06263 46 TVMAEGGYNAVLN--PEDSFEKHFEDTMKGGAYLNDPKLVEILVKEAPKRLKDLEKFGALFDRTEDGEIAQRPFGGQSFN 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 180 fgkggqahRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLM-ENGECRGVIALCIEDGSIHRIRAKNTVVATGG 258
Cdd:PRK06263 124 --------RTCYAGDRTGHEMMMGLMEYLIKERIKILEEVMAIKLIVdENREVIGAIFLDLRNGEIFPIYAKATILATGG 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 259 YGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGI----YGAGCLITEGCRGEGGILINSQGERFMERYAPVA 334
Cdd:PRK06263 196 AGQLYPITSNPIQKTGDGFAIAYRAGAELIDMEMVQFHPTGMvypySGRGILVTEAVRGEGGILYNKNGERFMKRYDPER 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 335 KDLASRDVVSRSMTLEIREGRGCgpekDH--VYLQLHHLPPEQLATRLPGISETAMIFaGVDVTKEPIPVLPTVHYNMGG 412
Cdd:PRK06263 276 MELSTRDVVARAIYTEIQEGRGT----NHggVYLDVTHLPDEVIEEKLETMLEQFLDV-GVDIRKEPMEVAPTAHHFMGG 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 413 IPTNYKGQVlrhvngqdqIVPGLYACGEAAcASVHGANRLGANSLLDLVVFGRACALSieeSCRPGDKVPPIKPN-AGEE 491
Cdd:PRK06263 351 IRINEDCET---------NIPGLFACGEVA-GGVHGANRLGGNALADTQVFGAIAGKS---AAKNAENNEFKKVNrSVEE 417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 492 SVMNLDKL-RFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKISKLYGDLKHLKTFDRgmvwnTDLVETLELQN 570
Cdd:PRK06263 418 DIARIKSEiKFLNGSINPYDLIDELKKTMWDYVSIVRNEKGLKKALEEINELKEKLKDLKVNGI-----VDFNKALELEN 492
|
490 500 510
....*....|....*....|....*....|....
gi 156416003 571 LMLCALQTIYGAEARKESRGAHAREDYKVRIDEY 604
Cdd:PRK06263 493 MILVAELVIKSALLRKESRGAHYREDYPETNDEW 526
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
80-457 |
1.40e-133 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 398.20 E-value: 1.40e-133
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 80 LSEAGFNTACVTKLFPTRSHTVAAQGGINAALG--NMEEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYG 157
Cdd:pfam00890 18 AAEAGLKVAVVEKGQPFGGATAWSSGGIDALGNppQGGIDSPELHPTDTLKGLDELADHPYVEAFVEAAPEAVDWLEALG 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 158 MPFSRTEDGKIYQRAFGGQSLKfgkggqAHRCCCVADR-----TGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECR 232
Cdd:pfam00890 98 VPFSRTEDGHLDLRPLGGLSAT------WRTPHDAADRrrglgTGHALLARLLEGLRKAGVDFQPRTAADDLIVEDGRVT 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 233 GVIALCIEDGSIHRIRAK-NTVVATGGYGR---------TYFSCTSAHTSTGDGTAMITRAGLPCQD--LEFVQFHPTGI 300
Cdd:pfam00890 172 GAVVENRRNGREVRIRAIaAVLLATGGFGRlaelllpaaGYADTTNPPANTGDGLALALRAGAALTDdlMEFVQFHPTSL 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 301 YG----AGCLItEGCRGEGGILINSQGERFMeryapvaKDLASRDVVSRSMT-LEIREGRGcgpekDHVYLQLHH-LPPE 374
Cdd:pfam00890 252 VGirlgSGLLI-EALRGEGGILVNKDGRRFM-------NELASRDVVSRAITrNEIDEGRG-----ANVYLDASGsLDAE 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 375 QLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVLRHvngQDQIVPGLYACGEAACASVHGANRLGA 454
Cdd:pfam00890 319 GLEATLPAINEEAIFGLDVDPYDRPIPVFPAQHYTMGGVRTDENGRVLDA---DGQPIPGLYAAGEVACGGVHGANRLGG 395
|
...
gi 156416003 455 NSL 457
Cdd:pfam00890 396 NSL 398
|
|
| sdhA |
PRK07803 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
60-597 |
1.05e-107 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236101 [Multi-domain] Cd Length: 626 Bit Score: 338.93 E-value: 1.05e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 60 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNM-EEDNWRWHFYDTVKGSDWLGDQDA 138
Cdd:PRK07803 7 HSYDVVVIGAGGAGLRAAIEARERGLRVAVVCKSLFGKAHTVMAEGGCAAAMGNVnPKDNWQVHFRDTMRGGKFLNNWRM 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 139 IHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAFGGQSLKfgkggqahRCCCVADRTGHSLLHTLYGR--SLRYDTSY- 215
Cdd:PRK07803 87 AELHAKEAPDRVWELETYGALFDRTKDGRISQRNFGGHTYP--------RLAHVGDRTGLELIRTLQQKivSLQQEDHAe 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 216 ----------FVEYFALDLLMENGECRGVIALCIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGL 285
Cdd:PRK07803 159 lgdyearikvFAECTITELLKDGGRIAGAFGYWRESGRFVLFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHALALRAGA 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 286 PCQDLEFVQFHPTGIYGA----GCLITEGCRGEGGILINSQGERFMERYAP-VAK------------------------D 336
Cdd:PRK07803 239 TLINMEFVQFHPTGMVWPpsvkGILVTEGVRGDGGVLKNSEGKRFMFDYIPdVFKgqyaeteeeadrwykdndnnrrppE 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 337 LASRDVVSRSMTLEIREGRGcgpeKDH--VYLQL-HHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGI 413
Cdd:PRK07803 319 LLPRDEVARAINSEVKAGRG----SPHggVYLDIaSRLPAEEIKRRLPSMYHQFKELADVDITKEPMEVGPTCHYVMGGV 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 414 PTNykgqvlrhVNGQDQIVPGLYACGEAAcASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDKVPPIKPNAGEESV 493
Cdd:PRK07803 395 EVD--------PDTGAATVPGLFAAGECA-GGMHGSNRLGGNSLSDLLVFGRRAGLGAADYVRGLGSRPAVSEEAVDAAA 465
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 494 -MNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKISKLYGDLKHLKT-----FDRGmvWNTdlveTLE 567
Cdd:PRK07803 466 rEALAPFERPAGAENPYTLHAELQQTMNDLVGIIRKEDEIEQALEKLAELKERAANVSVeghrqYNPG--WHL----ALD 539
|
570 580 590
....*....|....*....|....*....|
gi 156416003 568 LQNLMLCALQTIYGAEARKESRGAHAREDY 597
Cdd:PRK07803 540 LRNMLLVSECVARAALERTESRGGHTRDDH 569
|
|
| PLN02815 |
PLN02815 |
L-aspartate oxidase |
88-602 |
3.58e-102 |
|
L-aspartate oxidase
Pssm-ID: 215436 [Multi-domain] Cd Length: 594 Bit Score: 323.59 E-value: 3.58e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 88 ACVTKLFPTRSHTVAAQGGINAALGnmEEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGK 167
Cdd:PLN02815 55 AIITKDEPHESNTNYAQGGVSAVLD--PSDSVESHMRDTIVAGAFLCDEETVRVVCTEGPERVKELIAMGASFDHGEDGN 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 168 IYQRAFGGQSlkfgkggqAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEY-FALDLLM-ENGE---CRGVIALCIEDG 242
Cdd:PLN02815 133 LHLAREGGHS--------HHRIVHAADMTGREIERALLEAVKNDPNITFFEHhFAIDLLTsQDGGsivCHGADVLDTRTG 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 243 SIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGC------------LITEG 310
Cdd:PLN02815 205 EVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGIAMAHRAQAVVSNMEFVQFHPTALADEGLpikpakarenafLITEA 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 311 CRGEGGILINSQGERFMERYAPVAkDLASRDVVSRSMTLEIREGRgcgpEKdHVYLQLHHLPPEQLATRLPGISETAMIF 390
Cdd:PLN02815 285 VRGDGGILYNLAGERFMPLYDERA-ELAPRDVVARSIDDQLKKRN----EK-YVLLDISHKPREEILSHFPNIAAECLKR 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 391 aGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVlrhvngqdqIVPGLYACGEAACASVHGANRLGANSLLDLVVFG-RACAL 469
Cdd:PLN02815 359 -GLDITKQPIPVVPAAHYMCGGVRTGLQGET---------NVQGLYAAGEVACTGLHGANRLASNSLLEALVFArRAVQP 428
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 470 SIE-------ESCRPGDKVPPIKPNAGEESVMNlDKLRFadgsirTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKISKL 542
Cdd:PLN02815 429 SIDhmaralrDVSAAAAWARPVAPTALADSVMD-EILEW------TAVVRKELQRIMWNYVGIVRSTERLETAERKLEEL 501
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 543 YGDLKHlKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRID 602
Cdd:PLN02815 502 EAEWEA-ILFRHGWKPTMVGLEACEMRNLFCVAKLVVSSALARKESRGLHYTTDYPELVE 560
|
|
| nadB |
TIGR00551 |
L-aspartate oxidase; L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase ... |
80-597 |
1.53e-94 |
|
L-aspartate oxidase; L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase complex. Quinolinate synthetase makes a precursor of the pyridine nucleotide portion of NAD. This model identifies proteins that cluster as L-aspartate oxidase (a flavoprotein difficult to separate from the set of closely related flavoprotein subunits of succinate dehydrogenase and fumarate reductase) by both UPGMA and neighbor-joining trees. The most distant protein accepted as an L-aspartate oxidase (NadB), that from Pyrococcus horikoshii, not only clusters with other NadB but is just one gene away from NadA. [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides]
Pssm-ID: 273131 [Multi-domain] Cd Length: 489 Bit Score: 300.56 E-value: 1.53e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 80 LSEAGFnTACVTKLFPTRSHTVAAQGGINAALgnMEEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMP 159
Cdd:TIGR00551 21 LAEKGR-VSVITKASVTDSNSYYAQGGIAAAL--AETDSIDAHVEDTLAAGAGICDEEAVWFVVSDGSEAVQFLVSHGVT 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 160 FSRTEDGKIYQRAFGGQSLKfgkggqahRCCCVADRTGHSLLHTLYGRSL-RYDTSYFVEYFALDLLMENGECRGViaLC 238
Cdd:TIGR00551 98 FDRNEQGGVALTREGGHSYP--------RIFHAGDATGREIIPTLEKHARsEPNVNIIEGEFALDLLIETGRCAGV--FV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 239 IEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGC---LITEGCRGEG 315
Cdd:TIGR00551 168 QGSGTLETLHADAVVLATGGFGGLYRFTTNPKNSTGDGIALAWRAGVPVRDLEFVQFHPTALIKPRVryfLITEAVRGEG 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 316 GILINSQGERFMERYAPVAkDLASRDVVSRSMTLEIREGrgcgpEKDHVYLQLHHLPPeqLATRLPGISETaMIFAGVDV 395
Cdd:TIGR00551 248 AKLVDRDGERFMADRHPRG-ELAPRDIVARAIDMEMAEG-----GGDCVFLDASGIEN--FKDRFPTIYAV-CRGAGIDP 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 396 TKEPIPVLPTVHYNMGGIPTNykgqvlrhVNGQDQIvPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIeesC 475
Cdd:TIGR00551 319 EREPIPVAPGAHYTMGGISVD--------AFGRTTI-PGLYAIGETACTGLHGANRLASNSLLECLVFGLRAARTI---S 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 476 RPGDKVPPIKPNAGEESVMNLDKLRFADGSIRTSELRLsmqkSMQNHAAVFRVGSVLQEGCGKISKlygdlkhlktfdrg 555
Cdd:TIGR00551 387 REPPYASREYQSGVWDEPRSENPLDRHELQHKMSSLRS----VLWNHAGIVRLEWSLREALRKLVE-------------- 448
|
490 500 510 520
....*....|....*....|....*....|....*....|..
gi 156416003 556 mvWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDY 597
Cdd:TIGR00551 449 --IQDEVDERMELSNLKLVAKLVTISALKREESRGAHYRLDY 488
|
|
| PRK07512 |
PRK07512 |
L-aspartate oxidase; Provisional |
103-597 |
2.47e-92 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236036 [Multi-domain] Cd Length: 513 Bit Score: 295.28 E-value: 2.47e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 103 AQGGINAALGnmEEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIyqrAFGGQSlkfgk 182
Cdd:PRK07512 50 AQGGIAAALG--PDDSPALHAADTLAAGAGLCDPAVAALITAEAPAAIEDLLRLGVPFDRDADGRL---ALGLEA----- 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 183 ggqAH---RCCCVA-DRTGHSLLHTLYGRSLRYDTSYFVE-YFALDLLMENGECRGViaLCIEDGSIHRIRAKNTVVATG 257
Cdd:PRK07512 120 ---AHsrrRIVHVGgDGAGAAIMRALIAAVRATPSITVLEgAEARRLLVDDGAVAGV--LAATAGGPVVLPARAVVLATG 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 258 GYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGaGC----LITEGCRGEGGILINSQGERFMERYAPv 333
Cdd:PRK07512 195 GIGGLYAVTTNPAGAFGQGLALAARAGAVIADPEFVQFHPTAIDI-GRdpapLATEALRGEGAILINEDGERFMADIHP- 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 334 AKDLASRDVVSRSMTLEIREGRGcgpekdhVYLQLHHLPPEQLATRLPGISEtAMIFAGVDVTKEPIPVLPTVHYNMGGI 413
Cdd:PRK07512 273 GAELAPRDVVARAVFAEIAAGRG-------AFLDARAALGAHFATRFPTVYA-ACRSAGIDPARQPIPVAPAAHYHMGGI 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 414 PTNYKGQvlrhvngqdQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGdKVPPIKPNAGEESV 493
Cdd:PRK07512 345 AVDADGR---------SSLPGLWAAGEVASTGLHGANRLASNSLLEAVVFAARAAEDIAGTPAAA-AAPLSAAAAPALDP 414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 494 MNLDKLRfadgsirtselrlsmqKSMQNHAAVFRVGSVLQEGCGKIsklygdlkhlktfdrgmvwntdlvETLE-----L 568
Cdd:PRK07512 415 ADLALLR----------------PIMSRHVGVLRDADGLRRAIAAL------------------------LPLEagagpA 454
|
490 500
....*....|....*....|....*....
gi 156416003 569 QNLMLCALQTIYGAEARKESRGAHAREDY 597
Cdd:PRK07512 455 ADPATVALLIAVAALAREESRGAHFRTDF 483
|
|
| PRK08071 |
PRK08071 |
L-aspartate oxidase; Provisional |
90-597 |
1.89e-91 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236147 [Multi-domain] Cd Length: 510 Bit Score: 293.05 E-value: 1.89e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 90 VTKLFPTRSHTVAAQGGINAALGnmEEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKiy 169
Cdd:PRK08071 31 ITKKTKRNSNSHLAQGGIAAAVA--TYDSPNDHFEDTLVAGCHHNNERAVRYLVEEGPKEIQELIENGMPFDGDETGP-- 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 170 qrafggqsLKFGKGGqAHRCCCV----ADRTGHSLLHTLYGRSLRYDTsyFVEY-FALDLLMENGECRGVIALcIEDGSI 244
Cdd:PRK08071 107 --------LHLGKEG-AHRKRRIlhagGDATGKNLLEHLLQELVPHVT--VVEQeMVIDLIIENGRCIGVLTK-DSEGKL 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 245 HRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAG-C--LITEGCRGEGGILINS 321
Cdd:PRK08071 175 KRYYADYVVLASGGCGGLYAFTSNDKTITGDGLAMAYRAGAELVDLEFIQFHPTMLYANGrCvgLVSEAVRGEGAVLINE 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 322 QGERFMERYAPVaKDLASRDVVSRSMTLEIREGrgcgpekDHVYLQLHHLPpeQLATRLPGIseTAMI-FAGVDVTKEPI 400
Cdd:PRK08071 255 DGRRFMMGIHPL-ADLAPRDVVARAIHEELLSG-------EKVYLNISSIQ--NFEERFPTI--SALCeKNGVDIETKRI 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 401 PVLPTVHYNMGGIPTNYKGQVlrhvngqdqIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDK 480
Cdd:PRK08071 323 PVVPGAHFLMGGVKTNLDGET---------SIPGLYAIGEVACTGVHGANRLASNSLLEGLVFGKRAAEHILTKATKPRL 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 481 VPPIKPNAGEESVMNL-DKlrfadgsirtSELrlsmQKSMQNHAAVFRVGSVLQEgcgkisklygdLKH-LKTFD-RGMV 557
Cdd:PRK08071 394 NPFAEKEKKFIVLNHLpTK----------EEI----QEKMMKYVGIVRTEQSLSE-----------AKRwLEKYGvRNMI 448
|
490 500 510 520
....*....|....*....|....*....|....*....|..
gi 156416003 558 WNTD--LVETLELQNLMLCALQTIYGAEARKESRGAHAREDY 597
Cdd:PRK08071 449 LDHDalTNEEIELSHMLTVAKLIVVSALQRTESRGGHYRSDY 490
|
|
| PRK07395 |
PRK07395 |
L-aspartate oxidase; Provisional |
88-627 |
7.38e-91 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236010 [Multi-domain] Cd Length: 553 Bit Score: 292.72 E-value: 7.38e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 88 ACVTKLFPTRSHTVAAQGGINAALGnmEEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTedgk 167
Cdd:PRK07395 35 GLITKDTLKTSASDWAQGGIAAAIA--PDDSPKLHYEDTLKAGAGLCDPEAVRFLVEQAPEAIASLVEMGVAFDRH---- 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 168 iyqrafgGQSLKFGKGGqAHRCCCV---ADRTGHSLLHTLYGRSL-RYDTSYFVEYFALDLLM--ENGECRGViaLCIED 241
Cdd:PRK07395 109 -------GQHLALTLEA-AHSRPRVlhaADTTGRAIVTTLTEQVLqRPNIEIISQALALSLWLepETGRCQGI--SLLYQ 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 242 GSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGC---LITEGCRGEGGIL 318
Cdd:PRK07395 179 GQITWLRAGAVILATGGGGQVFAQTTNPAVSTGDGVALAWRAGAQLRDLEFFQFHPTALTKPGAprfLISEAVRGEGAHL 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 319 INSQGERFMERYAPvAKDLASRDVVSRSMTLEIREgRGCGPEKDHVYLQLHHLPPEQLATRLPGISETAMIFaGVDVTKE 398
Cdd:PRK07395 259 VDAQGRRFAFDYHP-AGELAPRDVVSRAIFSHLQK-TATDPATAHVWLDLRPIPAERIRRRFPNIIRVCQKW-GIDVFQE 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 399 PIPVLPTVHYNMGGIPTNykgqvlrhVNGQDQIvPGLYACGEAACASVHGANRLGANSLLDLVVFGRACA---LSIEESC 475
Cdd:PRK07395 336 PIPVAPAAHYWMGGVVTD--------LNNQTSI-PGLYAVGETASTGVHGANRLASNSLLECLVFAAQLAqleLPIEPPA 406
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 476 RPGDKVPPIKPNAGEESvMNLDKLRfadgsirtsELRLSMQKSMQNHAAVFRVGSVLQEGCGKISKLYGDLKHLK----- 550
Cdd:PRK07395 407 SPDLPPISFIIDASQWK-NEQEQIQ---------RIRQELPELVWQSAGICREADTLERAIAQVEQWQQQLAALPlsqfl 476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 551 ---------TFDRGMVwNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYkvrideydyskPiqgqQKKPfeeH 621
Cdd:PRK07395 477 anlppgqtvSFNGPDA-EQQLRLWAETRNLLDIAYLILKSALFRTESRGGHYRLDY-----------P----QTDP---A 537
|
....*.
gi 156416003 622 WRKHTL 627
Cdd:PRK07395 538 WQVHTL 543
|
|
| PRK09077 |
PRK09077 |
L-aspartate oxidase; Provisional |
103-597 |
1.54e-85 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236374 [Multi-domain] Cd Length: 536 Bit Score: 278.34 E-value: 1.54e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 103 AQGGINAALGnmEEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDgkiyqrAFGGQSLKFGK 182
Cdd:PRK09077 49 AQGGIAAVLD--ETDSIESHVEDTLIAGAGLCDEDAVRFIAENAREAVQWLIDQGVPFTTDEQ------ANGEEGYHLTR 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 183 -GGQAHR-CCCVADRTGHSLLHTLYGRSLRYDTSYFVE-YFALDLLMEN------GECRGVIALCIEDGSIHRIRAKNTV 253
Cdd:PRK09077 121 eGGHSHRrILHAADATGKAVQTTLVERARNHPNITVLErHNAIDLITSDklglpgRRVVGAYVLNRNKERVETIRAKFVV 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 254 VATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGC---LITEGCRGEGGILINSQGERFMERY 330
Cdd:PRK09077 201 LATGGASKVYLYTTNPDIASGDGIAMAWRAGCRVANMEFNQFHPTCLYHPQArsfLITEALRGEGAYLKLPDGTRFMPDF 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 331 APVAkDLASRDVVSRSMTLEIREgRGCgpekDHVYLQLHHLPPEQLATRLPGISETAMIFaGVDVTKEPIPVLPTVHYNM 410
Cdd:PRK09077 281 DERA-ELAPRDIVARAIDHEMKR-LGA----DCVYLDISHKPADFIRQHFPTIYERCLEL-GIDITKEPIPVVPAAHYTC 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 411 GGIPTNYKGQVlrhvngqDqiVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCRPGDKVPPIKP---- 486
Cdd:PRK09077 354 GGVMVDLHGRT-------D--LDGLYAIGEVSYTGLHGANRMASNSLLECLVYGRSAAEDILSRLPKAPMPPTLPAwdes 424
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 487 ---NAGEESVM--NLDKLRFA--D--GSIRTSElRLsmqksmqnHAAVFRVGSVLQEgcgkISKLYGDLKhlktfdrgmV 557
Cdd:PRK09077 425 rvtDSDEEVVIqhNWHELRLFmwDyvGIVRTTK-RL--------ERALHRIRLLQQE----IDEYYANFR---------V 482
|
490 500 510 520
....*....|....*....|....*....|....*....|
gi 156416003 558 WNtDLvetLELQNLMLCALQTIYGAEARKESRGAHAREDY 597
Cdd:PRK09077 483 SN-NL---LELRNLVQVAELIVRCAMERKESRGLHYTLDY 518
|
|
| sdhA_Bsu |
TIGR01811 |
succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis ... |
80-664 |
3.02e-82 |
|
succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup; This model represents the succinate dehydrogenase flavoprotein subunit as found in the low-GC Gram-positive bacteria and a few other lineages. This enzyme may act in a complete or partial TCA cycle, or act in the opposite direction as fumarate reductase. In some but not all species, succinate dehydrogenase and fumarate reductase may be encoded as separate isozymes. [Energy metabolism, TCA cycle]
Pssm-ID: 130870 [Multi-domain] Cd Length: 603 Bit Score: 271.72 E-value: 3.02e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 80 LSEAGFNTacvtKLF-----PTRSHTVAAQGGINAALGNMEEDNWRW-HFYDTVKGSDWLGDQDAIHYMTEQAPAAVVEL 153
Cdd:TIGR01811 17 LAELGYHV----KLFsyvdaPRRAHSIAAQGGINGAVNTKGDGDSPWrHFDDTVKGGDFRARESPVKRLAVASPEIIDLM 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 154 ENYGMPFSRTEDGKIYQRAFGGQslkfgkggQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFA----LDLLM-EN 228
Cdd:TIGR01811 93 DAMGVPFAREYGGLLDTRSFGGV--------QVSRTAYARGQTGQQLLLALDSALRRQIAAGLVEKYEgwemLDIIVvDG 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 229 GECRGVIALCIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGC--- 305
Cdd:TIGR01811 165 NRARGIIARNLVTGEIETHSADAVILATGGYGNVFGKSTNAMNSNASAAWRAYEQGAYFANPEFIQIHPTAIPVDGTwqs 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 306 ---LITEGCRGEGGI----------LINS--QGER--FMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPEKDHVYLQL 368
Cdd:TIGR01811 245 klrLMSESLRNDGRIwtpkekndnrDPNTipEDKRdyFLERRYPAFGNLVPRDIASRAIFQVCDAGKGVGPGENAVYLDF 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 369 HH----LPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKgqvlrhvngQDQIVPGLYACGEAAcA 444
Cdd:TIGR01811 325 SDaderLGRKEIDAKYGNLFEMYEKFTGDDPYKVPMRIFPAVHYTMGGLWVDYD---------QMTNIPGLFAAGECD-F 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 445 SVHGANRLGANSLLDLVVFGRACA-------LSIEESCRPGDKVPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQK 517
Cdd:TIGR01811 395 SQHGANRLGANSLLSAIADGYFALpftipnyLGPELSSEDMPEDAPEFQAALAEEQERFDRLLKMRGDENPYYLHRELGE 474
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 518 SMQNHAAVFRVGSVLQEGCGKISKLYGDL-KHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHARED 596
Cdd:TIGR01811 475 IMTENCGVSRNNEKLLKTDEKIRELRERFwKNIDIPGTTKESNQVLEFARRVADYLELAELMCLDALNRNESCGAHFRPE 554
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 156416003 597 YKVRIDEYDYSkpiqgqqkkpfEEHWRKHTLSYVDVGTGKVTLEYRPVidktlneaDCATVPPAIRSY 664
Cdd:TIGR01811 555 FPTPDGEAERN-----------DEEFLKVTAWEFQGENDAPEFHYEEL--------DFELVPPRKRDY 603
|
|
| sdhA |
PRK08641 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
80-664 |
2.87e-81 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236319 [Multi-domain] Cd Length: 589 Bit Score: 268.38 E-value: 2.87e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 80 LSEAGfntaCVTKLFP----TRSHTVAAQGGINAALGNMEEDNWRW-HFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELE 154
Cdd:PRK08641 22 AAEAG----VHVDLFSlvpvKRSHSVCAQGGINGAVNTKGEGDSPWiHFDDTVYGGDFLANQPPVKAMCEAAPGIIHLLD 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 155 NYGMPFSRTEDGKIYQRAFGGQslkfgkggQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFA----LDLLM-ENG 229
Cdd:PRK08641 98 RMGVMFNRTPEGLLDFRRFGGT--------LHHRTAFAGATTGQQLLYALDEQVRRYEVAGLVTKYEgwefLGAVLdDEG 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 230 ECRGVIALCIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGC--LI 307
Cdd:PRK08641 170 VCRGIVAQDLFTMEIESFPADAVIMATGGPGIIFGKSTNSTINTGSAASRVYQQGAYYANGEFIQIHPTAIPGDDKlrLM 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 308 TEGCRGEGG-ILINSQGER--FMERYAPVAKDLASRDVVSRsmtlEI-----REGRGCGPEkDHVYLQLHHLPPEQLATR 379
Cdd:PRK08641 250 SESARGEGGrVWTYKDGKPwyFLEEKYPAYGNLVPRDIATR----EIfdvcvEQKLGINGE-NMVYLDLSHKDPKELDIK 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 380 LPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYkgqvlrhvngqDQI--VPGLYACGEAAcASVHGANRLGANSL 457
Cdd:PRK08641 325 LGGILEIYEKFTGDDPRKVPMKIFPAVHYSMGGLWVDY-----------DQMtnIPGLFAAGECD-YSYHGANRLGANSL 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 458 LDLVVFGRACALSIEESCRPGDKVPPIKPNAGEESVMNLDKLRFA-----DGSIRTSELRLSMQKSMQNHAAVFRVGSVL 532
Cdd:PRK08641 393 LSAIYGGMVAGPNAVEYIKGLGKSADDVSSSVFEQALKQEQEKFDnilsmDGTENAYVLHKELGEWMTDNVTVVRENDKL 472
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 533 QEGCGKISKLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRIDeydyskpiqg 612
Cdd:PRK08641 473 LETDEKIQELMERYKRISVNDTSRWSNQGASFTRQLWNMLELARVITIGALNRNESRGAHYKPEFPERND---------- 542
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|..
gi 156416003 613 qqkkpfeEHWRKHTLSYVDVGTGKVTLEYRPVidktlneaDCATVPPAIRSY 664
Cdd:PRK08641 543 -------ENWLKTTMATYTPEGEEPEFSYEDV--------DTSLIPPRKRDY 579
|
|
| PRK07804 |
PRK07804 |
L-aspartate oxidase; Provisional |
80-604 |
7.84e-79 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236102 [Multi-domain] Cd Length: 541 Bit Score: 260.67 E-value: 7.84e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 80 LSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNmeEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMP 159
Cdd:PRK07804 35 ARRAGRRVLVVTKAALDDGSTRWAQGGIAAVLDP--GDSPEAHVADTLVAGAGLCDPDAVRSLVAEGPRAVRELVALGAR 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 160 FSRTEDGKIYQRAFGGQSlkfgkggqAHRcccVA----DRTG----HSLLHTLYGRSLRYDTSYFVeyfaLDLLM-ENGE 230
Cdd:PRK07804 113 FDESPDGRWALTREGGHS--------RRR---IVhaggDATGaevqRALDAAVRADPLDIREHALA----LDLLTdGTGA 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 231 CRGVIALCIEDGS---IHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIY-GAGC- 305
Cdd:PRK07804 178 VAGVTLHVLGEGSpdgVGAVHAPAVVLATGGLGQLYAATTNPAGSTGDGVALALRAGAAVSDLEFVQFHPTVLFlGPAAg 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 306 ----LITEGCRGEGGILINSQGERFMERYAPVAkDLASRDVVSRSMTLEIREgRGcgpeKDHVYLQLHHLppEQLATRLP 381
Cdd:PRK07804 258 gqrpLISEAVRGEGAILVDAQGNRFMAGVHPLA-DLAPRDVVAKAIDRRMKA-TG----DDHVYLDARGI--EGFARRFP 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 382 GISEtAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYKGQVlrhvngqdqIVPGLYACGEAACASVHGANRLGANSLLDLV 461
Cdd:PRK07804 330 TITA-SCRAAGIDPVRQPIPVAPAAHYSCGGVVTDVYGRT---------SVPGLYAAGEVACTGVHGANRLASNSLLEGL 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 462 VFGRACALSIEESCRPGDKVPPIKPNAGEESVMnldklrfadgsirTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKISK 541
Cdd:PRK07804 400 VVGERAGAAAAAHAAAAGRPRATPAVGPEPGLL-------------PALDRAELQRAMTRGAGVLRSAAGLARAADRLAA 466
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 156416003 542 LYGdlkhlKTFDRGmvwntdlVETLELQNLMLCALQTIYGAEARKESRGAHAREDYKVRIDEY 604
Cdd:PRK07804 467 GAP-----ARVVPG-------RADWEDTNLTLVARALVAAALARTESRGCHWREDFPDTDDEW 517
|
|
| PRK06175 |
PRK06175 |
L-aspartate oxidase; Provisional |
85-471 |
1.10e-70 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 180442 [Multi-domain] Cd Length: 433 Bit Score: 235.73 E-value: 1.10e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 85 FNTACVTKLFPTRSHTVAAQGGINAALGnmeEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTE 164
Cdd:PRK06175 27 LKILMVSKGKLNECNTYLAQGGISVARN---KDDITSFVEDTLKAGQYENNLEAVKILANESIENINKLIDMGLNFDKDE 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 165 DGKIYQRAfGGQSLkfgkggqaHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVE--YFaLDLLMENGECRGviALCIEDG 242
Cdd:PRK06175 104 KELSYTKE-GAHSV--------NRIVHFKDNTGKKVEKILLKKVKKRKNITIIEncYL-VDIIENDNTCIG--AICLKDN 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 243 SIHRIRAKNTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGC-----LITEGCRGEGGI 317
Cdd:PRK06175 172 KQINIYSKVTILATGGIGGLFKNSTNQRIITGDGIAIAIRNNIKIKDLDYIQIHPTAFYEETIegkkfLISESVRGEGGK 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 318 LINSQGERFMeryapvaKDLASRDVVSRSMTLEIREgrgcgPEKDHVYLQLHHLPPEQLATRLPGISETAMIfAGVDVTK 397
Cdd:PRK06175 252 LLNSKGERFV-------DELLPRDVVTKAILEEMKK-----TGSNYVYLDITFLDKDFLKNRFPTIYEECLK-RGIDITK 318
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 156416003 398 EPIPVLPTVHYNMGGIPTNYKGQV-LRHvngqdqivpgLYACGEAACASVHGANRLGANSLLDLVVFGRACALSI 471
Cdd:PRK06175 319 DAIPVSPAQHYFMGGIKVDLNSKTsMKN----------LYAFGEVSCTGVHGANRLASNSLLEGLVFSKRGAEKI 383
|
|
| Succ_DH_flav_C |
pfam02910 |
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate ... |
512-664 |
3.54e-61 |
|
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate dehydrogenases and L-aspartate oxidases.
Pssm-ID: 460743 [Multi-domain] Cd Length: 129 Bit Score: 199.98 E-value: 3.54e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 512 RLSMQKSMQNHAAVFRVGSVLQEGCGKISKLYGDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGA 591
Cdd:pfam02910 1 RRELQKTMQDNVGVFRTEEGLKEALEKIQELRERYKNVRVTDKSKVFNTELIEALELANLLELAEATARSALARKESRGA 80
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 156416003 592 HAREDYKVRIDeydyskpiqgqqkkpfeEHWRKHTLSYVDVGTGKVTLEYRPVIDKTLneadcatVPPAIRSY 664
Cdd:pfam02910 81 HAREDYPERDD-----------------ENWLKHTLAYYDGDDGGPRLEYEPVTFTTL-------FPPKERSY 129
|
|
| PRK08401 |
PRK08401 |
L-aspartate oxidase; Provisional |
80-605 |
2.61e-58 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236259 [Multi-domain] Cd Length: 466 Bit Score: 203.88 E-value: 2.61e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 80 LSEAGFNTACVTKLfPTRSHTVAAQGGInaALGNMEEDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMP 159
Cdd:PRK08401 20 LAKKGFDVTIIGPG-IKKSNSYLAQAGI--AFPILEGDSIRAHVLDTIRAGKYINDEEVVWNVISKSSEAYDFLTSLGLE 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 160 FSRTEdgkiyqrAFGGQSLkfgkggqaHRCCCVADRTGHSLLHTLYGRSLRYDTSyFVEYFALDLLMENGECRGVIAlci 239
Cdd:PRK08401 97 FEGNE-------LEGGHSF--------PRVFTIKNETGKHIIKILYKHARELGVN-FIRGFAEELAIKNGKAYGVFL--- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 240 eDGSIHRIRAknTVVATGGYGRTYFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYGAGC--LITEGCRGEGGI 317
Cdd:PRK08401 158 -DGELLKFDA--TVIATGGFSGLFKFTAGSPLNLGTLIGDAVMKGAPARDLEFVQFHPTGFIGKRGtyLISEAVRGAGAK 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 318 LINSQGERFMeryapvaKDLASRDVVSRSMTLEIREGRGcgpekdhVYLQLHHLppEQLATRLPGISeTAMIFAGVDVTK 397
Cdd:PRK08401 235 LVTGDGERFV-------NELETRDIVARAIYRKMQEGKG-------VFLDATGI--EDFKRRFPQIY-AFLRKEGIDPSR 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 398 EPIPVLPTVHYNMGGIPTN--YKGQVlrhvngqdqivPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESc 475
Cdd:PRK08401 298 DLIPVTPIAHYTIGGISVDtfYRTGI-----------KNLYAIGEAASNGFHGANRLASNSLLECIVSGLEVARTISRE- 365
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 476 RPGDKVPPIKPNAGEEsVMNLDKLRfadgsirtselrlsmqKSMQNHAAVFRVGSVLQEGCGKISKLYGDlKHLKTFDRG 555
Cdd:PRK08401 366 RPKLREVKEPPYHGYE-LGDVDSIR----------------EILWNHAGIVRSEESLREGLKKLEGIEAD-PRLKLLAKG 427
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|
gi 156416003 556 mvwntdlvetlelqnLMLCALqtiygaeARKESRGAHAREDYKVRIDEYD 605
Cdd:PRK08401 428 ---------------VLECAL-------AREESRGAHYREDFPFMRKEFE 455
|
|
| sdhA |
PRK07573 |
fumarate reductase/succinate dehydrogenase flavoprotein subunit; |
80-597 |
3.55e-45 |
|
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
Pssm-ID: 236054 [Multi-domain] Cd Length: 640 Bit Score: 170.77 E-value: 3.55e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 80 LSEAGFNTACVTklF---PTRSHTVAAQGGINAAlGNMEEDN---WRwHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVEL 153
Cdd:PRK07573 54 LGELGYNVKVFC--YqdsPRRAHSIAAQGGINAA-KNYQNDGdsvYR-LFYDTVKGGDFRAREANVYRLAEVSVNIIDQC 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 154 ENYGMPFSRTEDGKIYQRAFGG-Q-SLKFGKGGQahrcccvadrTGHSLLHTLYGRSLRYDTSYFVEYFA----LDLLME 227
Cdd:PRK07573 130 VAQGVPFAREYGGLLANRSFGGaQvSRTFYARGQ----------TGQQLLLGAYQALSRQIAAGTVKMYTrtemLDLVVV 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 228 NGECRGVIALCIEDGSIHRIRAKNTVVATGGYGRTYFSCTSAHTStgDGTAmITRA-------GLPCqdleFVQFHPTGI 300
Cdd:PRK07573 200 DGRARGIVARNLVTGEIERHTADAVVLATGGYGNVFYLSTNAMGS--NATA-IWRAhkkgayfANPC----FTQIHPTCI 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 301 YGAG------CLITEGCRGEGGILINSQ------------GER--FMERYAPVAKDLASRDVVSRSMTLEIREGRGCGPE 360
Cdd:PRK07573 273 PVSGdyqsklTLMSESLRNDGRIWVPKKkgdkrkpndipeEERdyYLERRYPAFGNLVPRDVASRAAKERCDAGRGVGPT 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 361 KDHVYLQL----HHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYkgqvlrhvNGQDQIvPGLY 436
Cdd:PRK07573 353 GLGVYLDFadaiKRLGKDVIRERYGNLFDMYERITGENPYETPMRIYPAVHYTMGGLWVDY--------NLMSTI-PGLF 423
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 437 ACGEAACaSVHGANRLGANSLLdlvvfgRACA-------LSIEESCRPGDKVPPIKPN-----AGEESVMN-LDKLRFAD 503
Cdd:PRK07573 424 VIGEANF-SDHGANRLGASALM------QGLAdgyfvlpYTIGNYLADTIGTPKVSTDhpefkEAEAEVQDrIDRLLNIK 496
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 504 GSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKISKLYGDL-KHLKTFDRGMVWNTDL------VETLELQNLMlcal 576
Cdd:PRK07573 497 GKRTVDSFHRELGKIMWDYCGMARNEEGLKKALEKIRALREEFwKNVRVPGSADELNQELekagrvADFLELGELM---- 572
|
570 580
....*....|....*....|.
gi 156416003 577 qtIYGAEARKESRGAHAREDY 597
Cdd:PRK07573 573 --CRDALHREESCGGHFREEH 591
|
|
| flavo_cyto_c |
TIGR01813 |
flavocytochrome c; This model describes a family of redox proteins related to the succinate ... |
103-465 |
2.05e-40 |
|
flavocytochrome c; This model describes a family of redox proteins related to the succinate dehydrogenases and fumarate reductases of E. coli, mitochondria, and other well-characterized systems. A member of this family from Shewanella frigidimarina NCIMB400 is characterized as a water-soluble periplasmic protein with four heme groups, a non-covalently bound FAD, and essentially unidirectional fumarate reductase activity. At least seven distinct members of this family are found in Shewanella oneidensis, a species able to use a wide variety of pathways for respiraton. [Energy metabolism, Electron transport]
Pssm-ID: 273816 [Multi-domain] Cd Length: 439 Bit Score: 153.65 E-value: 2.05e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 103 AQGGINAALGNME-----EDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVvELENYGMPFSRTedgKIYQraFGGQS 177
Cdd:TIGR01813 42 AAGGMNAAGTDQQkalgiEDSPELFIKDTLKGGRGINDPELVRILAEESKDAV-DWLQDGVGARLD---DLIQ--LGGHS 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 178 LKfgkggQAHRCCCVAdRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLM-ENGECRGVIALcIEDGSIHRIRAKNTVVAT 256
Cdd:TIGR01813 116 VP-----RAHRPTGGA-ASGAEIVQTLYKKAKKEGIDTRLNSKVEDLIQdDQGSVVGVVVK-GKGKGIYIKAAKAVVLAT 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 257 GGYGR------TY------FSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTG-IYGAGCLITEGCRGEGGILINSQG 323
Cdd:TIGR01813 189 GGFGSnkemiaKYdptlkhLGSTNQPGATGDGLLMAEKIGAALVDMDYIQAHPTAsPDEGGFLISEAVRGYGAILVNKTG 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 324 ERFMEryapvakDLASRDVVSRsmtlEIREGRGCGP-----EKDHV-------YLQLHHLPP----EQLATRLpGISETA 387
Cdd:TIGR01813 269 ERFMN-------ELATRDKVSD----AILAQPGKDAylifdDDVYKkakmvdnYYRLGVAYKgdslEELAKQF-GIPAAA 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 388 ----------------------MIFAGVDVTKEP---IPVLPTVHYNMGGIPTNYKGQVLrhvNGQDQIVPGLYACGEAA 442
Cdd:TIGR01813 337 lkqtikdyngyvasgkdtpfgrPMDMPTDLSKAPyyaIKVTPGVHHTMGGVKINTKAEVL---DANGKPIPGLFAAGEVT 413
|
410 420
....*....|....*....|...
gi 156416003 443 cASVHGANRLGANSLLDLVVFGR 465
Cdd:TIGR01813 414 -GGVHGANRLGGNAIADCIVFGR 435
|
|
| PRK06481 |
PRK06481 |
flavocytochrome c; |
82-465 |
4.77e-36 |
|
flavocytochrome c;
Pssm-ID: 180584 [Multi-domain] Cd Length: 506 Bit Score: 142.28 E-value: 4.77e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 82 EAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEE-----DNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENY 156
Cdd:PRK06481 82 DAGMNPVILEKMPVAGGNTMKASSGMNASETKFQKaqgiaDSNDKFYEETLKGGGGTNDKALLRYFVDNSASAIDWLDSM 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 157 GMPFSRTEdgkiyqrAFGGQSLKfgkggQAHRcccVADRT--GHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGV 234
Cdd:PRK06481 162 GIKLDNLT-------ITGGMSEK-----RTHR---PHDGSavGGYLVDGLLKNVQERKIPLFVNADVTKITEKDGKVTGV 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 235 IALcIEDGSIHRIRAKNTVVATGGYGRT------------YFSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYG 302
Cdd:PRK06481 227 KVK-INGKETKTISSKAVVVTTGGFGANkdmiakyrpdlkGYVTTNQEGSTGDGIKMIEKLGGTTVDMDQIQIHPTVQQS 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 303 AGCLITEGCRGEGGILINSQGERFM-----------------ERYAPVAKDLASRDvvsRSMTLEIREGRGCGPEKDHV- 364
Cdd:PRK06481 306 KSYLIGEAVRGEGAILVNQKGKRFGneldtrdkvsaainklpEKYAYVVFDSGVKD---RVKAIAQYEEKGFVEEGKTId 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 365 -YLQLHHLPPEQLATRLPGISE-------------TAMifaGVDVTKEP---IPVLPTVHYNMGGIPTNYKGQVLRHvng 427
Cdd:PRK06481 383 eLAKKINVPAETLTKTLDTWNKavknkkdeafgrtTGM---DNDLSTGPyyaIKIAPGIHYTMGGVKINTNTEVLKK--- 456
|
410 420 430
....*....|....*....|....*....|....*...
gi 156416003 428 QDQIVPGLYACGEAAcASVHGANRLGANSLLDLVVFGR 465
Cdd:PRK06481 457 DGSPITGLYAAGEVT-GGLHGENRIGGNSVADIIIFGR 493
|
|
| PRK06854 |
PRK06854 |
adenylyl-sulfate reductase subunit alpha; |
150-646 |
7.29e-20 |
|
adenylyl-sulfate reductase subunit alpha;
Pssm-ID: 235879 [Multi-domain] Cd Length: 608 Bit Score: 93.83 E-value: 7.29e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 150 VVEL-ENYGMPFSRTEDGKiYQRAfG-------GQSLKfgkggqahrcCCVADRTGHSLLHTLYGRSlrydtsyfveyFA 221
Cdd:PRK06854 100 VVHLfEEWGLPIWKDENGK-YVRR-GrwqiminGESYK----------PIVAEAAKKALGDNVLNRV-----------FI 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 222 LDLLMENGECRGVIALCIEDGSIHRIRAKNTVVATGG----YgRTYFSCTSAHT------STGDGTAMITRAG--LPCQD 289
Cdd:PRK06854 157 TDLLVDDNRIAGAVGFSVRENKFYVFKAKAVIVATGGaagiY-RPRSPGEGRGRmwyppfNTGSGYAMGIRAGaeMTTFE 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 290 LEFVQFH------PTGIYGAGCliteGCRgeggiLINSQGERFMERYAPVAKDLASRDVVSR--------SMTLEIREGR 355
Cdd:PRK06854 236 NRFIPLRfkdgygPVGAWFLLF----KAK-----AVNALGEEYEAKNAAELKKYVPYADYKPiptclrnyATVEENKAGR 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 356 gcGPekdhVYLQLHH-LPPEQLATRL--------PGIsetAMIFAGVDV--TKEPIPVLPTVHYNMGGiptnYKGQVLRH 424
Cdd:PRK06854 307 --GP----IYMDTEEaLQDKHLESELwedfldmtPGQ---ALLWAAQNIepEEENSEIMGTEPYIVGS----HSGASGYW 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 425 VNGQDQI--------------VPGLYACGEAACASVH----GAnrlganslldlVVFGRACALSIEESCRPG-DKVPPIK 485
Cdd:PRK06854 374 VSGPEDWvpeeykwgynrmttVEGLFAAGDVVGGSPHkfssGS-----------FAEGRIAAKAAVRYILDNkDEKPEID 442
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 486 PNAGEESVMNLDK-----LRFADGS---------IRTSELRLSMQKSMQNHAAVFRV-----GSVLQEGCGKISKLYGDL 546
Cdd:PRK06854 443 DDQIEELKKEIYApleryEEFKDYStdpdvnpnyISPEQLEERLQKIMDEYAGGISTnyttnEKLLEIALELLEMLEEDS 522
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 547 KHLKTFDrgmvwNTDLVETLELQNLMLCALQTIYGAEARKESR--GAHAREDYKVRIDeydyskpiqgqqkkpfeEHWRK 624
Cdd:PRK06854 523 EKLAARD-----LHELMRCWELKHRLLVAEAHIRHLLFRKETRwpGYYERADYPGKDD-----------------ENWKC 580
|
570 580
....*....|....*....|..
gi 156416003 625 HTLSYVDVGTGKVTLEYRPVID 646
Cdd:PRK06854 581 FVNSRYDPGTGEWTIRKLPYYQ 602
|
|
| PTZ00306 |
PTZ00306 |
NADH-dependent fumarate reductase; Provisional |
241-465 |
3.50e-17 |
|
NADH-dependent fumarate reductase; Provisional
Pssm-ID: 140327 [Multi-domain] Cd Length: 1167 Bit Score: 85.99 E-value: 3.50e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 241 DGSIHRIRAKNTVVATGGYG---------RTY------FSCTSAHTSTGDGTAMITRAGLPCQDLEFVQFHPTGIYG--- 302
Cdd:PTZ00306 601 SGQVMDLLADAVILATGGFSndhtpnsllREYapqlsgFPTTNGPWATGDGVKLARKLGATLVDMDKVQLHPTGLIDpkd 680
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 303 ----AGCLITEGCRGEGGILINSQGERFMeryapvaKDLASRDVVS---------------------------------- 344
Cdd:PTZ00306 681 psnrTKYLGPEALRGSGGVLLNKNGERFV-------NELDLRSVVSqaiiaqgneypgsggskfaycvlneaaaklfgkn 753
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 345 -------------RSMTLE-IREGRGCGPEKDHVYL-QLHHLPPEQLATRLPGisetAMIFAGVDVTKEPIPV---LPTV 406
Cdd:PTZ00306 754 slgfywkrlglfqRVDDVKgLAKLIGCPVENLHRTLeTYERLSTKKVACPLTG----KVVFPCVVGTQGPYYVafvTPSI 829
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 156416003 407 HYNMGGIPTNYKGQVLRHVNGQDQI-----VPGLYACGEAAcASVHGANRLGANSLLDLVVFGR 465
Cdd:PTZ00306 830 HYTMGGCLISPSAEMQMEDNSVNIFedrrpILGLFGAGEVT-GGVHGGNRLGGNSLLECVVFGK 892
|
|
| PRK08275 |
PRK08275 |
putative oxidoreductase; Provisional |
130-644 |
1.52e-14 |
|
putative oxidoreductase; Provisional
Pssm-ID: 181346 [Multi-domain] Cd Length: 554 Bit Score: 77.01 E-value: 1.52e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 130 SDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDG-----KIYQraFGGQSLKFgkggqahrcccvadRTGHSLLHTL 204
Cdd:PRK08275 80 NDGIVDQKAVYAYAEHSFETIQQLDRWGVKFEKDETGdyavkKVHH--MGSYVLPM--------------PEGHDIKKVL 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 205 YGRSLRYDTSYFVEYFALDLLMEN-GECRGVIALCIEDGSIHRIRAKNTVVATGGYGR-----------TYFSCTSAhts 272
Cdd:PRK08275 144 YRQLKRARVLITNRIMATRLLTDAdGRVAGALGFDCRTGEFLVIRAKAVILCCGAAGRlglpasgylfgTYENPTNA--- 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 273 tGDGTAMITRAGLPCQDLEFVQFHP--TGIYGAGCLITEGcrGEGGILINSQGERFMERYAPvakdlasrdvvSRSMTLE 350
Cdd:PRK08275 221 -GDGYAMAYHAGAELANLECFQINPliKDYNGPACAYVTG--PLGGYTANAKGERFIECDYW-----------SGQMMWE 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 351 I-RE-GRGCGPekdhVYLQLHHLPPEQlatrlpgISETAMIF--------------AGVDVTKEPIP-VLPTVHYNMG-- 411
Cdd:PRK08275 287 FyQElQSGNGP----VFLKLDHLAEET-------IQTIETILhtnerpsrgrfhegRGTDYRQQMVEmHISEIGFCSGhs 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 412 --GIPTNYKGQVlrhvngqdqIVPGLYACGEAACasvhganrLGANSLLDLVVFGRACALSIEESCRPGDKVPPIKPNAG 489
Cdd:PRK08275 356 asGVWVNEKAET---------TVPGLYAAGDMAS--------VPHNYMLGAFTYGWFAGENAAEYVAGRDLPEVDAAQVE 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 490 EESVMNLDKLRFADGsIRTSELRLSMQKSMQNHAAVFRVGSVLQEGCGKISKLYGDLKHLKTFDrgmvWNtDLVETLELQ 569
Cdd:PRK08275 419 AERARVLAPLHREDG-LPPAQVEYKLRRLVNDYLQPPKVTRKMEIGLQRFAEIREDLERIKARD----PH-ELMRALEVS 492
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 156416003 570 NLMLCALQTIYGAEARKESRGA--HAREDYKVRIDeydyskpiqgqqkkpfeEHWRKHTLSYVDVgTGKVTLEYRPV 644
Cdd:PRK08275 493 SIRDCAEMAARASLFRTESRWGlyHYRVDFPERND-----------------AEWFCHTHLRKDE-DGRMVSFKRPV 551
|
|
| PRK13800 |
PRK13800 |
fumarate reductase/succinate dehydrogenase flavoprotein subunit; |
106-443 |
3.01e-10 |
|
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
Pssm-ID: 237512 [Multi-domain] Cd Length: 897 Bit Score: 63.72 E-value: 3.01e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 106 GINAAL--GNMEEDNWrwhFYDTVKGSDWLGDQDAIHYMTEQAPAAVVELENYGMPFSRTEDGKIYQRAF---GGQSLKF 180
Cdd:PRK13800 59 GVNNAVipGKAEPEDY---VAEITRANDGIVNQRTVYQTATRGFAMVQRLERYGVKFEKDEHGEYAVRRVhrsGSYVLPM 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 181 GKGGQAHRcccvadrtghSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGSIHRIRAKNTVVATGGYG 260
Cdd:PRK13800 136 PEGKDVKK----------ALYRVLRQRSMRERIRIENRLMPVRVLTEGGRAVGAAALNTRTGEFVTVGAKAVILATGPCG 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 261 R-----------TYFSCTSAhtstGDGTAMITRAGLPCQDLEFVQFHP--TGIYGAGCLITegCRGEGGILINSQGERFm 327
Cdd:PRK13800 206 RlglpasgylygTYENPTNA----GDGYSMAYHAGAELSGIECFQINPliKDYNGPACAYV--ANPFGGYQVNAQGERF- 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 328 eryapVAKDLASRDVVSRsMTLEIREGRgcGPekdhVYLQLHHLPPEQLATrLPGISETamifagvdvTKEpiPVLPTVH 407
Cdd:PRK13800 279 -----VDSDYWSGQMMAE-VKREIESAR--GP----IYLKVSHLPEETLSA-LESILHT---------TER--PTRGTFH 334
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 156416003 408 YNMG---------------GIPTNYKGQVLRHVNGQDQIVPGLYACGEAAC 443
Cdd:PRK13800 335 ANRGhdyrthdiemhiseiGLCSGHSASGVWVDEHARTTVPGLYAAGDLAC 385
|
|
| PRK12844 |
PRK12844 |
3-ketosteroid-delta-1-dehydrogenase; Reviewed |
197-482 |
4.28e-06 |
|
3-ketosteroid-delta-1-dehydrogenase; Reviewed
Pssm-ID: 183787 [Multi-domain] Cd Length: 557 Bit Score: 49.75 E-value: 4.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 197 GHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIAlcIEDGSIHRIRAKNTV-VATGGYGR------------TY 263
Cdd:PRK12844 207 GAALIGRMLEAALAAGVPLWTNTPLTELIVEDGRVVGVVV--VRDGREVLIRARRGVlLASGGFGHnaemrkryqpqpNS 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 264 FSCTSAHTS-TGDG--TAMITRAGLPCQDLEF---VQFHPTGIYGAGCLITEGCRgEGGILINSQGERFMER---YAPVA 334
Cdd:PRK12844 285 GDWTNANPGdTGEVieAAMRLGAALDLMDEAWwvpGAPLPNGGPRPYMHNSERSK-PGSIIVDRAGRRFVNEagsYMEVG 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 335 KDLASRDVVSRSMTLEIREGR---------GCGPEK--DHVYLQ----------LHHLPPEQLAT---RLPGISETamif 390
Cdd:PRK12844 364 RAMYAQDAVPAWMIMDSRYRKrylfgtippGPTPQEwlDSGYMKradtieelagKTGIDPAGLAAtveRFNGFAAT---- 439
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 156416003 391 aGVDV----------------TKEPIPVLPTV----HYNM----------GGIPTNYKGQVLRHvngQDQIVPGLYACGE 440
Cdd:PRK12844 440 -GTDPdfhrgesaydryygdpTNKPNPSLGPLdkppFYAVrmvpgdvgtsGGLLTDEHARVLRE---DGSVIPGLYATGN 515
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 156416003 441 AAcASVHGANRLGAN-SLLDLVVFGRACALSIEEScRPGDKVP 482
Cdd:PRK12844 516 CT-ASVMGRTYPGAGaSIGNSFVFGYIAALHAAGA-RSADPPP 556
|
|
| PRK12834 |
PRK12834 |
putative FAD-binding dehydrogenase; Reviewed |
410-452 |
5.45e-04 |
|
putative FAD-binding dehydrogenase; Reviewed
Pssm-ID: 183782 [Multi-domain] Cd Length: 549 Bit Score: 42.96 E-value: 5.45e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 156416003 410 MGGIPTNYKGQVLRhvnGQDQIVPGLYACGEAA---CASVHGANRL 452
Cdd:PRK12834 485 LGGLETDLDSRVLG---ADGTPLPGLYAAGEAAgfgGGGVHGYNAL 527
|
|
| COG3573 |
COG3573 |
Predicted oxidoreductase [General function prediction only]; |
410-452 |
7.28e-04 |
|
Predicted oxidoreductase [General function prediction only];
Pssm-ID: 442794 [Multi-domain] Cd Length: 551 Bit Score: 42.47 E-value: 7.28e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 156416003 410 MGGIPTNYKGQVLRHvngQDQIVPGLYACGEAA---CASVHGANRL 452
Cdd:COG3573 486 LGGLQTDLDSRVLDA---DGQPIPGLYAAGEAAgfgGGGVHGYRAL 528
|
|
| |
