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syndecan-2 precursor [Homo sapiens]
syndecan( domain architecture ID 10470665)
syndecan is a cell surface proteoglycan that may bear both heparan sulfate and chondroitin sulfate and may link the cytoskeleton to the interstitial matrix
List of domain hits
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Name | Accession | Description | Interval | E-value | ||
Syndecan super family | cl20212 | Syndecan domain; Syndecans are transmembrane heparin sulfate proteoglycans which are ... |
138-200 | 9.08e-23 | ||
Syndecan domain; Syndecans are transmembrane heparin sulfate proteoglycans which are implicated in the binding of extracellular matrix components and growth factors. The actual alignment was detected with superfamily member pfam01034: Pssm-ID: 460035 Cd Length: 63 Bit Score: 86.68 E-value: 9.08e-23
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Name | Accession | Description | Interval | E-value | ||
Syndecan | pfam01034 | Syndecan domain; Syndecans are transmembrane heparin sulfate proteoglycans which are ... |
138-200 | 9.08e-23 | ||
Syndecan domain; Syndecans are transmembrane heparin sulfate proteoglycans which are implicated in the binding of extracellular matrix components and growth factors. Pssm-ID: 460035 Cd Length: 63 Bit Score: 86.68 E-value: 9.08e-23
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4.1m | smart00294 | putative band 4.1 homologues' binding motif; |
169-185 | 1.39e-03 | ||
putative band 4.1 homologues' binding motif; Pssm-ID: 128590 Cd Length: 19 Bit Score: 34.81 E-value: 1.39e-03
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Name | Accession | Description | Interval | E-value | ||
Syndecan | pfam01034 | Syndecan domain; Syndecans are transmembrane heparin sulfate proteoglycans which are ... |
138-200 | 9.08e-23 | ||
Syndecan domain; Syndecans are transmembrane heparin sulfate proteoglycans which are implicated in the binding of extracellular matrix components and growth factors. Pssm-ID: 460035 Cd Length: 63 Bit Score: 86.68 E-value: 9.08e-23
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4.1m | smart00294 | putative band 4.1 homologues' binding motif; |
169-185 | 1.39e-03 | ||
putative band 4.1 homologues' binding motif; Pssm-ID: 128590 Cd Length: 19 Bit Score: 34.81 E-value: 1.39e-03
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Blast search parameters | ||||
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