NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1211850950|ref|NP_001339931|]
View 

transmembrane protein adipocyte-associated 1 isoform 1 [Homo sapiens]

Protein Classification

Tmemb_40 domain-containing protein( domain architecture ID 10562721)

Tmemb_40 domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
Tmemb_40 pfam10160
Predicted membrane protein; This is a region of 280 amino acids from a group of proteins ...
40-312 1.63e-82

Predicted membrane protein; This is a region of 280 amino acids from a group of proteins conserved from plants to humans. It is predicted to be a membrane protein but its function is otherwise unknown.


:

Pssm-ID: 462970  Cd Length: 251  Bit Score: 251.88  E-value: 1.63e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1211850950  40 TSRVRYWDLLLLIPNVLFLIFLLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVsTSNAATVADKILWE 119
Cdd:pfam10160   1 GCHGRWHDAVLLLPSVLFVLFLALQARKSFAKLSHGRSPIMIAYYALLWLVSLLNLLWCFLQMWQ-CSPGKEVAWNLLSL 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1211850950 120 ITRFFLLAIELSVIILGLafghLESKSSIKRVLAITTVLSLAYSVTQGTLEILYpdahlsaedfnIYGHGGRQF------ 193
Cdd:pfam10160  80 FTRSGMLFLEVSLVAFLL----QGNYASGLEALARTFVISGLVVGVDLLLKAIY-----------IFGFGGPLFidsnda 144
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1211850950 194 -------WLVSSCFFFLVYSLVVILPKTPLKERisLPSRRSFYVYAGILALLNLLQGLGSVLLCFDIIEGLCCVDATTFL 266
Cdd:pfam10160 145 thgkwglWVAHSLLLTLVYGFILFLPHSRWRER--LPARPAFYNYVGIMFLLNAVQLLGCALIGAGAGFGLCLYGVTVVC 222
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1211850950 267 YFSFFAPLIYVAFLRGFFGsepkilfsykcqvdeteEPDVHLPQPY 312
Cdd:pfam10160 223 YHALYLPLLYVTFLADFFQ-----------------EEDLHLENVY 251
 
Name Accession Description Interval E-value
Tmemb_40 pfam10160
Predicted membrane protein; This is a region of 280 amino acids from a group of proteins ...
40-312 1.63e-82

Predicted membrane protein; This is a region of 280 amino acids from a group of proteins conserved from plants to humans. It is predicted to be a membrane protein but its function is otherwise unknown.


Pssm-ID: 462970  Cd Length: 251  Bit Score: 251.88  E-value: 1.63e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1211850950  40 TSRVRYWDLLLLIPNVLFLIFLLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVsTSNAATVADKILWE 119
Cdd:pfam10160   1 GCHGRWHDAVLLLPSVLFVLFLALQARKSFAKLSHGRSPIMIAYYALLWLVSLLNLLWCFLQMWQ-CSPGKEVAWNLLSL 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1211850950 120 ITRFFLLAIELSVIILGLafghLESKSSIKRVLAITTVLSLAYSVTQGTLEILYpdahlsaedfnIYGHGGRQF------ 193
Cdd:pfam10160  80 FTRSGMLFLEVSLVAFLL----QGNYASGLEALARTFVISGLVVGVDLLLKAIY-----------IFGFGGPLFidsnda 144
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1211850950 194 -------WLVSSCFFFLVYSLVVILPKTPLKERisLPSRRSFYVYAGILALLNLLQGLGSVLLCFDIIEGLCCVDATTFL 266
Cdd:pfam10160 145 thgkwglWVAHSLLLTLVYGFILFLPHSRWRER--LPARPAFYNYVGIMFLLNAVQLLGCALIGAGAGFGLCLYGVTVVC 222
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1211850950 267 YFSFFAPLIYVAFLRGFFGsepkilfsykcqvdeteEPDVHLPQPY 312
Cdd:pfam10160 223 YHALYLPLLYVTFLADFFQ-----------------EEDLHLENVY 251
 
Name Accession Description Interval E-value
Tmemb_40 pfam10160
Predicted membrane protein; This is a region of 280 amino acids from a group of proteins ...
40-312 1.63e-82

Predicted membrane protein; This is a region of 280 amino acids from a group of proteins conserved from plants to humans. It is predicted to be a membrane protein but its function is otherwise unknown.


Pssm-ID: 462970  Cd Length: 251  Bit Score: 251.88  E-value: 1.63e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1211850950  40 TSRVRYWDLLLLIPNVLFLIFLLWKLPSARAKIRITSSPIFITFYILVFVVALVGIARAVVSMTVsTSNAATVADKILWE 119
Cdd:pfam10160   1 GCHGRWHDAVLLLPSVLFVLFLALQARKSFAKLSHGRSPIMIAYYALLWLVSLLNLLWCFLQMWQ-CSPGKEVAWNLLSL 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1211850950 120 ITRFFLLAIELSVIILGLafghLESKSSIKRVLAITTVLSLAYSVTQGTLEILYpdahlsaedfnIYGHGGRQF------ 193
Cdd:pfam10160  80 FTRSGMLFLEVSLVAFLL----QGNYASGLEALARTFVISGLVVGVDLLLKAIY-----------IFGFGGPLFidsnda 144
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1211850950 194 -------WLVSSCFFFLVYSLVVILPKTPLKERisLPSRRSFYVYAGILALLNLLQGLGSVLLCFDIIEGLCCVDATTFL 266
Cdd:pfam10160 145 thgkwglWVAHSLLLTLVYGFILFLPHSRWRER--LPARPAFYNYVGIMFLLNAVQLLGCALIGAGAGFGLCLYGVTVVC 222
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1211850950 267 YFSFFAPLIYVAFLRGFFGsepkilfsykcqvdeteEPDVHLPQPY 312
Cdd:pfam10160 223 YHALYLPLLYVTFLADFFQ-----------------EEDLHLENVY 251
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH