|
Name |
Accession |
Description |
Interval |
E-value |
| DUF1216 |
pfam06746 |
Protein of unknown function (DUF1216); This family represents a conserved region, within ... |
1887-2020 |
1.49e-39 |
|
Protein of unknown function (DUF1216); This family represents a conserved region, within Arabidopsis thaliana proteins, of unknown function. Family members sometimes contain more than one copy.It has been reported that this domain will be found in other Brassicaceae.
Pssm-ID: 369060 Cd Length: 132 Bit Score: 143.78 E-value: 1.49e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1887 FFQKLKDYMKYLCPVSSTfeakDSRSYMSEMISMATKLSDAMAVLQAKKSGSGQMKTTLQGYQQEVMKTLTILQSVMGKA 1966
Cdd:pfam06746 1 FFEKLKASMKASCPVSST----DEKGYVSDMKSAAGKLSEAMSSVGSKFSKSGEMKKSIQTEQQEVMKTLKELQSVNSKI 76
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 1063714377 1967 VTEQQSKDSGSLTLTLSQQQAIKEIVLKWEQVMSQFVKIATESEKQFSLEISTE 2020
Cdd:pfam06746 77 VSENKGKKEGSMTLTSEQQTEIKQTITKWEQVTTQFVETAVSSSSSSSSSSSSS 130
|
|
| DUF1216 |
pfam06746 |
Protein of unknown function (DUF1216); This family represents a conserved region, within ... |
66-183 |
2.19e-27 |
|
Protein of unknown function (DUF1216); This family represents a conserved region, within Arabidopsis thaliana proteins, of unknown function. Family members sometimes contain more than one copy.It has been reported that this domain will be found in other Brassicaceae.
Pssm-ID: 369060 Cd Length: 132 Bit Score: 109.11 E-value: 2.19e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 66 FFEKLKDLLKLESSVTPLiednEPKTFKFDLKSKSENLLQTMFMLGR-----GLLSSSIRKEMFEVMKSLTELHAAIGRV 140
Cdd:pfam06746 1 FFEKLKASMKASCPVSST----DEKGYVSDMKSAAGKLSEAMSSVGSkfsksGEMKKSIQTEQQEVMKTLKELQSVNSKI 76
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1063714377 141 IIEKHIKGDEAMSLSLEQKNAVETSITQWEQTITRIVKIVVEV 183
Cdd:pfam06746 77 VSENKGKKEGSMTLTSEQQTEIKQTITKWEQVTTQFVETAVSS 119
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
1581-1821 |
1.39e-08 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 60.39 E-value: 1.39e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1581 ESLEDNKVKGKEDNGDEVGKENSKTIEVKGRHEESKDGKTNENGGKEVSTEEGSKDSNIVERNGGKED----SIKEGSED 1656
Cdd:TIGR00927 628 GDLSKGDVAEAEHTGERTGEEGERPTEAEGENGEESGGEAEQEGETETKGENESEGEIPAERKGEQEGegeiEAKEADHK 707
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1657 GKTV--EINGGEELSTEEGSKDGKIEEGKEGKEnstKESSKDGKINEIH-GDKEATMEEGSKDGGTNSTGKDSKDSKsvE 1733
Cdd:TIGR00927 708 GETEaeEVEHEGETEAEGTEDEGEIETGEEGEE---VEDEGEGEAEGKHeVETEGDRKETEHEGETEAEGKEDEDEG--E 782
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1734 INGVKDDSLKDDSKNGDINEINNGKEDSVKDNVTEIQGNDNSLTNSTSSEPNGDKLDTNKDSMKNNTMEAQGGSNGDSTN 1813
Cdd:TIGR00927 783 IQAGEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQDEKGVDGGGGSDGGD 862
|
....*...
gi 1063714377 1814 GETEETKE 1821
Cdd:TIGR00927 863 SEEEEEEE 870
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
1465-1696 |
3.08e-08 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 59.24 E-value: 3.08e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1465 EQSGGKKESMESESK-----EAENQQKSQATTQGESDESKNEIlMQADSQADTHANSQGDSDESKNEilmqadSQADSQT 1539
Cdd:TIGR00927 668 EQEGETETKGENESEgeipaERKGEQEGEGEIEAKEADHKGET-EAEEVEHEGETEAEGTEDEGEIE------TGEEGEE 740
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1540 DSDESKNEIlmQADSQADSQTDSDESKNEILMQADSQAKIGE----SLEDNKVKGKEdngDEVGKENSKTIEVKGRHEES 1615
Cdd:TIGR00927 741 VEDEGEGEA--EGKHEVETEGDRKETEHEGETEAEGKEDEDEgeiqAGEDGEMKGDE---GAEGKVEHEGETEAGEKDEH 815
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1616 KDGKTNENGGKEVSTEEGSKDSNIVERNGGKEDsiKEGSEDGKtvEINGGEELSTEEGSKDGKIEEGKEGKENSTKESSK 1695
Cdd:TIGR00927 816 EGQSETQADDTEVKDETGEQELNAENQGEAKQD--EKGVDGGG--GSDGGDSEEEEEEEEEEEEEEEEEEEEEEEEEENE 891
|
.
gi 1063714377 1696 D 1696
Cdd:TIGR00927 892 E 892
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1248-1896 |
2.06e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 56.69 E-value: 2.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1248 KKESMESESKEAENQQKS-QATTQADSDESKNEILMQADSQADSHSDSQADSDESKNEILMQADSQATTQRNNEEDRKKQ 1326
Cdd:PTZ00121 1300 EKKKADEAKKKAEEAKKAdEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKK 1379
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1327 TSV----AENKKQKETKEEKNKPKDDKKNTTKQSGGKKESMESESKEAENQQKSQATTQADSDESKNEILMQADSQADSH 1402
Cdd:PTZ00121 1380 ADAakkkAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKA 1459
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1403 SDSQADSDESKNEilMQADSQATTQRNNEEDRKKQTSVAENKKQKETKEEKNKPKDDKKNTTEQSGGKKESMESESKEAE 1482
Cdd:PTZ00121 1460 EEAKKKAEEAKKA--DEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKAD 1537
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1483 NQQKSQATTQGEsDESKNEILMQADSQADTHANSQGDSDES----KNEILMQADSQ--ADSQTDSDESKNEILMQADSQA 1556
Cdd:PTZ00121 1538 EAKKAEEKKKAD-ELKKAEELKKAEEKKKAEEAKKAEEDKNmalrKAEEAKKAEEAriEEVMKLYEEEKKMKAEEAKKAE 1616
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1557 DSQTDSDE-SKNEILMQADSQAKIGESLEDNKV----KGKEDNGDEVGKENSKTIEVKGRHEESKDGKTNENGGKEVSTE 1631
Cdd:PTZ00121 1617 EAKIKAEElKKAEEEKKKVEQLKKKEAEEKKKAeelkKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKK 1696
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1632 EGSKDSNIVERNGGKEDSIKEGSEDGKTVEING--GEELSTEEGSKDGKIEEGKEGKENSTK----ESSKDGKINEIHGD 1705
Cdd:PTZ00121 1697 EAEEAKKAEELKKKEAEEKKKAEELKKAEEENKikAEEAKKEAEEDKKKAEEAKKDEEEKKKiahlKKEEEKKAEEIRKE 1776
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1706 KEATMEEGSKDggtnstgKDSKDSKSVE--INGVKDDSLKDDSKNGDINEINNGKEDSVKDNVTEIQGNDNSLTNStSSE 1783
Cdd:PTZ00121 1777 KEAVIEEELDE-------EDEKRRMEVDkkIKDIFDNFANIIEGGKEGNLVINDSKEMEDSAIKEVADSKNMQLEE-ADA 1848
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1784 PNGDKLDTNKDSMKNNTMEAQGGSNGDSTNGETEETKES--NVSMNNQNMQDVGSNENsmnnqTTGTGDDIISTTTDTES 1861
Cdd:PTZ00121 1849 FEKHKFNKNNENGEDGNKEADFNKEKDLKEDDEEEIEEAdeIEKIDKDDIEREIPNNN-----MAGKNNDIIDDKLDKDE 1923
|
650 660 670
....*....|....*....|....*....|....*...
gi 1063714377 1862 NTSKEVTSF---ISNLEEKSPGTQEFQSffqKLKDYMK 1896
Cdd:PTZ00121 1924 YIKRDAEETreeIIKISKKDMCINDFSS---KFCDYMK 1958
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
212-459 |
2.23e-07 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 56.54 E-value: 2.23e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 212 ETNGENSESTQEKGDGVEGSNGgdvsmeNLQGNKVEDLKEGNNVVENGETKENNGENvESNNEKEVEGQGESIGDSAIEK 291
Cdd:TIGR00927 639 EHTGERTGEEGERPTEAEGENG------EESGGEAEQEGETETKGENESEGEIPAER-KGEQEGEGEIEAKEADHKGETE 711
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 292 NLESKEDVKSEVEAAKNDGSSMT---------ENLGEAQGNNGVSTIDNEKEVEGQGES---IEDSDIEKNLESKEDVKS 359
Cdd:TIGR00927 712 AEEVEHEGETEAEGTEDEGEIETgeegeevedEGEGEAEGKHEVETEGDRKETEHEGETeaeGKEDEDEGEIQAGEDGEM 791
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 360 EVEAAKNAGSSMTGKLEEAQRNNGVSTNETMNSENKGSGEsTNDKMVNATTNDEdhkKENKEETHENNGESVKGENLENK 439
Cdd:TIGR00927 792 KGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDE-TGEQELNAENQGE---AKQDEKGVDGGGGSDGGDSEEEE 867
|
250 260
....*....|....*....|
gi 1063714377 440 AGNEESMKGENLENKVGNEE 459
Cdd:TIGR00927 868 EEEEEEEEEEEEEEEEEEEE 887
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
1285-1656 |
8.33e-07 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 54.53 E-value: 8.33e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1285 DSQADSHSDSQADSDESKNEILMQADSQATTQRNNEEDrkkqtsvaenkkqKETKEEKNKPKDDKKNTTKQSGGKKESME 1364
Cdd:NF033609 560 DSDSDPGSDSGSDSSNSDSGSDSGSDSTSDSGSDSASD-------------SDSASDSDSASDSDSASDSDSASDSDSAS 626
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1365 SESKEAENQQKSQATTQADSDeSKNEILMQADSQADSHSDSQADSDESKNeilmqADSQATTQRNNEEDRKKQTSVAENK 1444
Cdd:NF033609 627 DSDSASDSDSASDSDSDSDSD-SDSDSDSDSDSDSDSDSDSDSDSDSDSD-----SDSDSDSDSDSDSDSDSDSDSDSDS 700
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1445 KQKETKEEKNKPKDDKKNTTEQSGGKKESMESESKEAENQQKSQATTQGESDESKNEILMQADSQADTHANSQGDSDESK 1524
Cdd:NF033609 701 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 780
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1525 NEilmQADSQADSQTDSDESKNeilmqADSQADSQTDSDESKNEILMQADSQAKIGESLEDNKVKGKEDNGDEVGKENSK 1604
Cdd:NF033609 781 DS---DSDSDSDSDSDSDSDSD-----SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 852
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 1063714377 1605 TIEVKGRHEESKDGKTNENGGKEVSTEEGSKDSNIVERNGGKEDSIKEGSED 1656
Cdd:NF033609 853 DSDSESDSNSDSESGSNNNVVPPNSPKNGTNASNKNEAKDSKEPLPDTGSED 904
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
579-844 |
1.14e-06 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 53.85 E-value: 1.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 579 GDHTKEKREETQgNNGESVKNEnlENKEDKKELKDDESVGAKTNNETSLEEKREQTQKGhdnSINSKIVDNKGGNADSNK 658
Cdd:TIGR00927 628 GDLSKGDVAEAE-HTGERTGEE--GERPTEAEGENGEESGGEAEQEGETETKGENESEG---EIPAERKGEQEGEGEIEA 701
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 659 EKEVHVGDSTNDnnmESKEDTKSEVEVKKNDGSSEKGEEGKENNKDSMED--------KKLENKESQTDSKDDKSVDDKQ 730
Cdd:TIGR00927 702 KEADHKGETEAE---EVEHEGETEAEGTEDEGEIETGEEGEEVEDEGEGEaegkheveTEGDRKETEHEGETEAEGKEDE 778
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 731 EEAQIYGGESKDDKSVEAKGKKKESKENKKTKTNENRVRNKEENVQGNKKESEKVEKGEKKESKDaksvETKDNKKLSST 810
Cdd:TIGR00927 779 DEGEIQAGEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQG----EAKQDEKGVDG 854
|
250 260 270
....*....|....*....|....*....|....*...
gi 1063714377 811 ENR----DEAKERSGEDNKEDKEESKDYQSVEAKEKNE 844
Cdd:TIGR00927 855 GGGsdggDSEEEEEEEEEEEEEEEEEEEEEEEEEENEE 892
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
1245-1566 |
1.65e-06 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 53.37 E-value: 1.65e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1245 SGGKKESMESESKEAENQQKSQATTQADSDESKNEILMQADSQADSHSDSQADSDESKNEILMQADSQATTQRNNEEDRK 1324
Cdd:NF033609 569 SGSDSSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDS 648
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1325 KQTSVAENKKQKETKEEKNKPKDDKKNTTKQSGGKKESMESESKEAENQQKSQATTQADSDeSKNEILMQADSQADSHSD 1404
Cdd:NF033609 649 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD-SDSDSDSDSDSDSDSDSD 727
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1405 SQADSDeSKNEILMQADSQATTQRNNEEDRKKQTSVAENKKQKETKEEKNKPKDDKKNTTEQSGGKKESMESESKEAENQ 1484
Cdd:NF033609 728 SDSDSD-SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 806
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1485 QKSQATTQGESDESKNEILMQADSQADTHANSQGDSD-ESKNEILMQADSQADSQTDSDESKNEILMQADSQADSQTDSD 1563
Cdd:NF033609 807 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDsDSDSDSDSDSDSESDSNSDSESGSNNNVVPPNSPKNGTNASN 886
|
...
gi 1063714377 1564 ESK 1566
Cdd:NF033609 887 KNE 889
|
|
| PTZ00341 |
PTZ00341 |
Ring-infected erythrocyte surface antigen; Provisional |
239-429 |
4.48e-06 |
|
Ring-infected erythrocyte surface antigen; Provisional
Pssm-ID: 173534 [Multi-domain] Cd Length: 1136 Bit Score: 52.10 E-value: 4.48e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 239 ENLQGNKVEDLKEgnNVVENGEtkENNGENVESNNEKEVEGQGESIGDSAIEKNLESKEDVKSEVEAAKNDGSSMTENLG 318
Cdd:PTZ00341 953 ENVEEDAEENVEE--NVEENVE--ENVEENVEENVEENVEENVEENVEENVEENIEENVEENVEENIEENVEEYDEENVE 1028
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 319 EAQGNNGVSTIDNEKEVEGQGESIEDSDIEKNLESKEDVKSEvEAAKNAGSSMTGKLEEAQRNNGVSTNETMNSENKGSG 398
Cdd:PTZ00341 1029 EVEENVEEYDEENVEEIEENAEENVEENIEENIEEYDEENVE-EIEENIEENIEENVEENVEENVEEIEENVEENVEENA 1107
|
170 180 190
....*....|....*....|....*....|.
gi 1063714377 399 ESTNDKmvNATTNDEDHKKENKEETHENNGE 429
Cdd:PTZ00341 1108 EENAEE--NAEENAEEYDDENPEEHNEEYDE 1136
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
1506-1864 |
1.14e-05 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 50.68 E-value: 1.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1506 ADSQADTHANSQGDSDESKNEILMQADSQADSQTDSDESKNEilmQADSQADSQTDSDESKNEILMQADSQAKIGESLED 1585
Cdd:NF033609 563 SDPGSDSGSDSSNSDSGSDSGSDSTSDSGSDSASDSDSASDS---DSASDSDSASDSDSASDSDSASDSDSASDSDSASD 639
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1586 NKVKGKEDNGDEVGKENSKTIEVKGRHEESKDGKTNENGGKEVSTEEGSkDSNIVERNGGKEDSIKEGSEDGKTVEINGG 1665
Cdd:NF033609 640 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS-DSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 718
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1666 EELSTEEGSKDGKIEEGKEGKENSTKESSKDGKINEIHGDKEATMEEGSKDGGTNSTGKDSKDSKSVEINGVKDDSLKDD 1745
Cdd:NF033609 719 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 798
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1746 SKNGDINEINNGKEDSVKDNVTEIQGNDNSLTNSTSSEPNGDKLDTNKDSMKNNTMEAQGGSNGDSTNGETEETKESNVS 1825
Cdd:NF033609 799 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSESDSNSDSESGSNNNVVPPNSP 878
|
330 340 350
....*....|....*....|....*....|....*....
gi 1063714377 1826 MNNQNMqdvgsnenSMNNQTTGTGDDIISTTTDTESNTS 1864
Cdd:NF033609 879 KNGTNA--------SNKNEAKDSKEPLPDTGSEDEANTS 909
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
239-1006 |
1.17e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 50.91 E-value: 1.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 239 ENLQGNKVEDLKEGNNVVENGETKENNGENVESNNEKEVE-----GQGESIGDSAIEKNLESKEDvkseveAAKNDGSSM 313
Cdd:PTZ00121 1022 QNFNIEKIEELTEYGNNDDVLKEKDIIDEDIDGNHEGKAEakahvGQDEGLKPSYKDFDFDAKED------NRADEATEE 1095
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 314 TENLGEAQGNNGVSTIDNEKEVEGQGESIEDSDIEKNLESKEDVKSEVEA--AKNAGSSMTGKLEEAQRNNGVSTNETMN 391
Cdd:PTZ00121 1096 AFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEArkAEDAKRVEIARKAEDARKAEEARKAEDA 1175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 392 SENKGSGESTNDKMVNATTNDEDHKKENKEETHENNGESVKGENLENKAGNEESMKGENLENKVGN----EELKGNASVE 467
Cdd:PTZ00121 1176 KKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEakkaEEERNNEEIR 1255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 468 AKTNNESSKEEKREESQRSNEVYMNKETTKGENVNIQGESIGDSTKDNSLENKEDVKPKVDANESDGNSTKERHQEAQVN 547
Cdd:PTZ00121 1256 KFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAK 1335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 548 NGVSTEDKNLDNIGADEQKKNDKS------VEVTTNDGDHTKEKREETQGNNGESVKNENLENKEDKKELKDDESVGAKT 621
Cdd:PTZ00121 1336 KKAEEAKKAAEAAKAEAEAAADEAeaaeekAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAA 1415
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 622 NNETSLEEKREQTQKGHDNSINSKIVDNKGGNADSNKEKEVHVGDSTNDNNMESK---EDTKSEVEVKKNDGSSEKGEEG 698
Cdd:PTZ00121 1416 AKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKkadEAKKKAEEAKKADEAKKKAEEA 1495
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 699 K---ENNKDSMEDKKLENKESQTDSKDDKSVDDKQEEAQIYGGESKDDKSVEAKGKKKESKENKKTKTNENRVRNKEENV 775
Cdd:PTZ00121 1496 KkkaDEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEED 1575
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 776 QGNKKESEKVEKGEKKESKDAKSVETKDNKKLSSTENRDEAKER-SGEDNKEDKEESKDYQSVEAKEKNENGGVD----- 849
Cdd:PTZ00121 1576 KNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKiKAEELKKAEEEKKKVEQLKKKEAEEKKKAEelkka 1655
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 850 ---TNVGNKEDSKDLKDDRSVEVKANKEESMKKKREEVQRNDKSSTKEVRDFANNMDIDVQKG-----SGESVKYKKDEK 921
Cdd:PTZ00121 1656 eeeNKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAeelkkAEEENKIKAEEA 1735
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 922 KEGNKEENKDTINTSSKQKGKDKKKKKKESKNSNMKKKEEDKKEYVNNELKKQE-------DNKKETTKSENSKLKEENK 994
Cdd:PTZ00121 1736 KKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDekrrmevDKKIKDIFDNFANIIEGGK 1815
|
810
....*....|....*.
gi 1063714377 995 DN----KEKKESEDSA 1006
Cdd:PTZ00121 1816 EGnlviNDSKEMEDSA 1831
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
1356-1696 |
2.05e-04 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 46.44 E-value: 2.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1356 SGGKKESMESESKEAENQQKSQATTQADSDESKNEILMQADSQADSHSDSQADSDeSKNEILMQADSQATTQRNNEEDRK 1435
Cdd:NF033609 569 SGSDSSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSASDSD-SASDSDSASDSDSASDSDSDSDSD 647
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1436 KQTSVAENKKQKETKEEKNKPKDDKKNTTEQSGGKKESMESESKEAENQQKSQATTQGESDESKNEILMQADSQADTHAN 1515
Cdd:NF033609 648 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 727
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1516 SQGDSDESKNEilmQADSQADSQTDSD-ESKNEILMQADSQADSQTDSDESKNEILMQADSQAKIGESLEDNKVKGKEDN 1594
Cdd:NF033609 728 SDSDSDSDSDS---DSDSDSDSDSDSDsDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 804
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1595 GDEVGKENSKTIEVKGRHEESKDGKTNENGGKEVSTEEGSKDSNIVERNGGKEDSIKEGSEDGKTVEINGGEelSTEEGS 1674
Cdd:NF033609 805 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSESDSNSDSESGSNNNVVPPN--SPKNGT 882
|
330 340
....*....|....*....|..
gi 1063714377 1675 KDGKIEEGKEGKENSTKESSKD 1696
Cdd:NF033609 883 NASNKNEAKDSKEPLPDTGSED 904
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
1383-1730 |
2.28e-04 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 46.44 E-value: 2.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1383 DSDESKNEILMQADSQADSHSDSQADSD-ESKNEILMQADSQATTQRNNEEDRKKQTSVAENKKQKETKEEKNKPKDDKK 1461
Cdd:NF033609 560 DSDSDPGSDSGSDSSNSDSGSDSGSDSTsDSGSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASD 639
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1462 NTTEQSGGKKESMESESKEAENQQKSQATTQGESDESKNEILMQADSQADTHANSQGDSDESKNeilmqADSQADSQTDS 1541
Cdd:NF033609 640 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD-----SDSDSDSDSDS 714
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1542 DESKNeilmqADSQADSQTDSDESKNeilmqADSQAKIGESLEDNKVKGKEDNGDEVGKENSKTIEVKGRHEESKDGKTN 1621
Cdd:NF033609 715 DSDSD-----SDSDSDSDSDSDSDSD-----SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 784
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1622 ENGGKEVSTEEGSKDSNIVERNGGKEDSIKEGSEDGKTVEINGGEELSTEEGSKDGKIEEGKEGKENSTKESSKDGKINE 1701
Cdd:NF033609 785 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSESDSNSDS 864
|
330 340 350
....*....|....*....|....*....|
gi 1063714377 1702 IHGDKEATMEEGSKDGGTNSTGK-DSKDSK 1730
Cdd:NF033609 865 ESGSNNNVVPPNSPKNGTNASNKnEAKDSK 894
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1248-1518 |
8.56e-04 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 44.54 E-value: 8.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1248 KKESMESESKEAENQQKSQATTQADSDESKNEILMQADSQADSHSDSQADSDESKNEIlmqadSQATTQRNNEEDRKKQT 1327
Cdd:COG1196 240 ELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAEL-----ARLEQDIARLEERRREL 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1328 SVAENKKQKETKEEKNKPKDDKKNTTKQSgGKKESMESESKEAENQQKSQATTQADSDESKNEILMQADSQADSHSDSQA 1407
Cdd:COG1196 315 EERLEELEEELAELEEELEELEEELEELE-EELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALR 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1408 DSDESKNEIL-----MQADSQATTQRNNEEDRKKQTSVAENKKQKETKEEKNKPKDDKKNTTEQSGGKKESMESESKEAE 1482
Cdd:COG1196 394 AAAELAAQLEeleeaEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAA 473
|
250 260 270
....*....|....*....|....*....|....*.
gi 1063714377 1483 NQQKSQATTQGESDESKNEILMQADSQADTHANSQG 1518
Cdd:COG1196 474 LLEAALAELLEELAEAAARLLLLLEAEADYEGFLEG 509
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
1245-1524 |
4.91e-03 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 42.20 E-value: 4.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1245 SGGKKESMESESKEAENQQKSQATTQADSDeSKNEILMQADSQADSHSDSQADSDESKNeilmqADSQATTQRNNEEDRK 1324
Cdd:NF033609 618 SASDSDSASDSDSASDSDSASDSDSDSDSD-SDSDSDSDSDSDSDSDSDSDSDSDSDSD-----SDSDSDSDSDSDSDSD 691
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1325 KQTSVAENKKQKETKEEKNKPKDDKKNTTKQSGGKKESMESESKEAENQQKSQATTQADSDESKNEILMQADSQADSHSD 1404
Cdd:NF033609 692 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 771
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1405 SQADSD---ESKNEILMQADSQATTQRNNEEDRKKQTSVAENKKQKETKEEKNKPKDDKKNTTEQSGGKKESMESESKEA 1481
Cdd:NF033609 772 SDSDSDsdsDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 851
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 1063714377 1482 ENQQKSQATTQGESDESKNEILMQADSQADTHANSQGDSDESK 1524
Cdd:NF033609 852 SDSDSESDSNSDSESGSNNNVVPPNSPKNGTNASNKNEAKDSK 894
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
1467-1792 |
8.43e-03 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 41.43 E-value: 8.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1467 SGGKKESMESESKEAENQQKSQATTQGESDESKNEILMQADSQADTHANSQGDSDeSKNEILMQADSQADSQTDSDESKN 1546
Cdd:NF033609 569 SGSDSSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSASDSD-SASDSDSASDSDSASDSDSDSDSD 647
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1547 EilmQADSQADSQTDSDESkneilmqADSQAKIGESLEDNKVKGKEDNGDEVGKENSKTIEVKGRHEESKDGKTNENGGK 1626
Cdd:NF033609 648 S---DSDSDSDSDSDSDSD-------SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 717
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1627 EVSTEEGSKDSNIVERNGGKEDSIKEGSEDGKTVEINGGEELSTEEGSKDGKIEEGKEGKENSTKESSKDGKINEIHGDK 1706
Cdd:NF033609 718 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 797
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1707 EATMEEGSKDGGTNSTGKDSKDSKSVEINGVKDDSLKDDSKNGDINEINNGKEDSVKDNVTEIQGNDNSLTNSTSSEPNG 1786
Cdd:NF033609 798 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSESDSNSDSESGSNNNVVPPNS 877
|
....*.
gi 1063714377 1787 DKLDTN 1792
Cdd:NF033609 878 PKNGTN 883
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| DUF1216 |
pfam06746 |
Protein of unknown function (DUF1216); This family represents a conserved region, within ... |
1887-2020 |
1.49e-39 |
|
Protein of unknown function (DUF1216); This family represents a conserved region, within Arabidopsis thaliana proteins, of unknown function. Family members sometimes contain more than one copy.It has been reported that this domain will be found in other Brassicaceae.
Pssm-ID: 369060 Cd Length: 132 Bit Score: 143.78 E-value: 1.49e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1887 FFQKLKDYMKYLCPVSSTfeakDSRSYMSEMISMATKLSDAMAVLQAKKSGSGQMKTTLQGYQQEVMKTLTILQSVMGKA 1966
Cdd:pfam06746 1 FFEKLKASMKASCPVSST----DEKGYVSDMKSAAGKLSEAMSSVGSKFSKSGEMKKSIQTEQQEVMKTLKELQSVNSKI 76
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 1063714377 1967 VTEQQSKDSGSLTLTLSQQQAIKEIVLKWEQVMSQFVKIATESEKQFSLEISTE 2020
Cdd:pfam06746 77 VSENKGKKEGSMTLTSEQQTEIKQTITKWEQVTTQFVETAVSSSSSSSSSSSSS 130
|
|
| DUF1216 |
pfam06746 |
Protein of unknown function (DUF1216); This family represents a conserved region, within ... |
66-183 |
2.19e-27 |
|
Protein of unknown function (DUF1216); This family represents a conserved region, within Arabidopsis thaliana proteins, of unknown function. Family members sometimes contain more than one copy.It has been reported that this domain will be found in other Brassicaceae.
Pssm-ID: 369060 Cd Length: 132 Bit Score: 109.11 E-value: 2.19e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 66 FFEKLKDLLKLESSVTPLiednEPKTFKFDLKSKSENLLQTMFMLGR-----GLLSSSIRKEMFEVMKSLTELHAAIGRV 140
Cdd:pfam06746 1 FFEKLKASMKASCPVSST----DEKGYVSDMKSAAGKLSEAMSSVGSkfsksGEMKKSIQTEQQEVMKTLKELQSVNSKI 76
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1063714377 141 IIEKHIKGDEAMSLSLEQKNAVETSITQWEQTITRIVKIVVEV 183
Cdd:pfam06746 77 VSENKGKKEGSMTLTSEQQTEIKQTITKWEQVTTQFVETAVSS 119
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
1581-1821 |
1.39e-08 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 60.39 E-value: 1.39e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1581 ESLEDNKVKGKEDNGDEVGKENSKTIEVKGRHEESKDGKTNENGGKEVSTEEGSKDSNIVERNGGKED----SIKEGSED 1656
Cdd:TIGR00927 628 GDLSKGDVAEAEHTGERTGEEGERPTEAEGENGEESGGEAEQEGETETKGENESEGEIPAERKGEQEGegeiEAKEADHK 707
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1657 GKTV--EINGGEELSTEEGSKDGKIEEGKEGKEnstKESSKDGKINEIH-GDKEATMEEGSKDGGTNSTGKDSKDSKsvE 1733
Cdd:TIGR00927 708 GETEaeEVEHEGETEAEGTEDEGEIETGEEGEE---VEDEGEGEAEGKHeVETEGDRKETEHEGETEAEGKEDEDEG--E 782
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1734 INGVKDDSLKDDSKNGDINEINNGKEDSVKDNVTEIQGNDNSLTNSTSSEPNGDKLDTNKDSMKNNTMEAQGGSNGDSTN 1813
Cdd:TIGR00927 783 IQAGEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQDEKGVDGGGGSDGGD 862
|
....*...
gi 1063714377 1814 GETEETKE 1821
Cdd:TIGR00927 863 SEEEEEEE 870
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
1470-1733 |
1.67e-08 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 60.01 E-value: 1.67e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1470 KKESMESESKEAENQQKSQATTQGESDESKNEILMQADSQADTHANSQGDSdESKNEILMQADSQADSQtDSDESKNEIL 1549
Cdd:TIGR00927 623 KVMALGDLSKGDVAEAEHTGERTGEEGERPTEAEGENGEESGGEAEQEGET-ETKGENESEGEIPAERK-GEQEGEGEIE 700
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1550 MQ-ADSQADSQTDSDESKNEILMQADSQAKIGESLEDNKVKGKEDNGDEVGKEnskTIEVKGrheeskDGKTNENGGKEV 1628
Cdd:TIGR00927 701 AKeADHKGETEAEEVEHEGETEAEGTEDEGEIETGEEGEEVEDEGEGEAEGKH---EVETEG------DRKETEHEGETE 771
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1629 STEEGSKDSNIVERNGGKEDSIKEGSEDGKTVEINGGEELSTEEGSKDGKIEEGKEGKEnstkESSKDGKINEIHGDKeA 1708
Cdd:TIGR00927 772 AEGKEDEDEGEIQAGEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKD----ETGEQELNAENQGEA-K 846
|
250 260
....*....|....*....|....*
gi 1063714377 1709 TMEEGSkDGGTNSTGKDSKDSKSVE 1733
Cdd:TIGR00927 847 QDEKGV-DGGGGSDGGDSEEEEEEE 870
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
1465-1696 |
3.08e-08 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 59.24 E-value: 3.08e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1465 EQSGGKKESMESESK-----EAENQQKSQATTQGESDESKNEIlMQADSQADTHANSQGDSDESKNEilmqadSQADSQT 1539
Cdd:TIGR00927 668 EQEGETETKGENESEgeipaERKGEQEGEGEIEAKEADHKGET-EAEEVEHEGETEAEGTEDEGEIE------TGEEGEE 740
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1540 DSDESKNEIlmQADSQADSQTDSDESKNEILMQADSQAKIGE----SLEDNKVKGKEdngDEVGKENSKTIEVKGRHEES 1615
Cdd:TIGR00927 741 VEDEGEGEA--EGKHEVETEGDRKETEHEGETEAEGKEDEDEgeiqAGEDGEMKGDE---GAEGKVEHEGETEAGEKDEH 815
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1616 KDGKTNENGGKEVSTEEGSKDSNIVERNGGKEDsiKEGSEDGKtvEINGGEELSTEEGSKDGKIEEGKEGKENSTKESSK 1695
Cdd:TIGR00927 816 EGQSETQADDTEVKDETGEQELNAENQGEAKQD--EKGVDGGG--GSDGGDSEEEEEEEEEEEEEEEEEEEEEEEEEENE 891
|
.
gi 1063714377 1696 D 1696
Cdd:TIGR00927 892 E 892
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1248-1896 |
2.06e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 56.69 E-value: 2.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1248 KKESMESESKEAENQQKS-QATTQADSDESKNEILMQADSQADSHSDSQADSDESKNEILMQADSQATTQRNNEEDRKKQ 1326
Cdd:PTZ00121 1300 EKKKADEAKKKAEEAKKAdEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKK 1379
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1327 TSV----AENKKQKETKEEKNKPKDDKKNTTKQSGGKKESMESESKEAENQQKSQATTQADSDESKNEILMQADSQADSH 1402
Cdd:PTZ00121 1380 ADAakkkAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKA 1459
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1403 SDSQADSDESKNEilMQADSQATTQRNNEEDRKKQTSVAENKKQKETKEEKNKPKDDKKNTTEQSGGKKESMESESKEAE 1482
Cdd:PTZ00121 1460 EEAKKKAEEAKKA--DEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKAD 1537
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1483 NQQKSQATTQGEsDESKNEILMQADSQADTHANSQGDSDES----KNEILMQADSQ--ADSQTDSDESKNEILMQADSQA 1556
Cdd:PTZ00121 1538 EAKKAEEKKKAD-ELKKAEELKKAEEKKKAEEAKKAEEDKNmalrKAEEAKKAEEAriEEVMKLYEEEKKMKAEEAKKAE 1616
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1557 DSQTDSDE-SKNEILMQADSQAKIGESLEDNKV----KGKEDNGDEVGKENSKTIEVKGRHEESKDGKTNENGGKEVSTE 1631
Cdd:PTZ00121 1617 EAKIKAEElKKAEEEKKKVEQLKKKEAEEKKKAeelkKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKK 1696
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1632 EGSKDSNIVERNGGKEDSIKEGSEDGKTVEING--GEELSTEEGSKDGKIEEGKEGKENSTK----ESSKDGKINEIHGD 1705
Cdd:PTZ00121 1697 EAEEAKKAEELKKKEAEEKKKAEELKKAEEENKikAEEAKKEAEEDKKKAEEAKKDEEEKKKiahlKKEEEKKAEEIRKE 1776
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1706 KEATMEEGSKDggtnstgKDSKDSKSVE--INGVKDDSLKDDSKNGDINEINNGKEDSVKDNVTEIQGNDNSLTNStSSE 1783
Cdd:PTZ00121 1777 KEAVIEEELDE-------EDEKRRMEVDkkIKDIFDNFANIIEGGKEGNLVINDSKEMEDSAIKEVADSKNMQLEE-ADA 1848
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1784 PNGDKLDTNKDSMKNNTMEAQGGSNGDSTNGETEETKES--NVSMNNQNMQDVGSNENsmnnqTTGTGDDIISTTTDTES 1861
Cdd:PTZ00121 1849 FEKHKFNKNNENGEDGNKEADFNKEKDLKEDDEEEIEEAdeIEKIDKDDIEREIPNNN-----MAGKNNDIIDDKLDKDE 1923
|
650 660 670
....*....|....*....|....*....|....*...
gi 1063714377 1862 NTSKEVTSF---ISNLEEKSPGTQEFQSffqKLKDYMK 1896
Cdd:PTZ00121 1924 YIKRDAEETreeIIKISKKDMCINDFSS---KFCDYMK 1958
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
212-459 |
2.23e-07 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 56.54 E-value: 2.23e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 212 ETNGENSESTQEKGDGVEGSNGgdvsmeNLQGNKVEDLKEGNNVVENGETKENNGENvESNNEKEVEGQGESIGDSAIEK 291
Cdd:TIGR00927 639 EHTGERTGEEGERPTEAEGENG------EESGGEAEQEGETETKGENESEGEIPAER-KGEQEGEGEIEAKEADHKGETE 711
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 292 NLESKEDVKSEVEAAKNDGSSMT---------ENLGEAQGNNGVSTIDNEKEVEGQGES---IEDSDIEKNLESKEDVKS 359
Cdd:TIGR00927 712 AEEVEHEGETEAEGTEDEGEIETgeegeevedEGEGEAEGKHEVETEGDRKETEHEGETeaeGKEDEDEGEIQAGEDGEM 791
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 360 EVEAAKNAGSSMTGKLEEAQRNNGVSTNETMNSENKGSGEsTNDKMVNATTNDEdhkKENKEETHENNGESVKGENLENK 439
Cdd:TIGR00927 792 KGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDE-TGEQELNAENQGE---AKQDEKGVDGGGGSDGGDSEEEE 867
|
250 260
....*....|....*....|
gi 1063714377 440 AGNEESMKGENLENKVGNEE 459
Cdd:TIGR00927 868 EEEEEEEEEEEEEEEEEEEE 887
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
182-437 |
2.28e-07 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 56.16 E-value: 2.28e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 182 EVKSKSSSEASSEESSSTEHNNVTTGSNMVETNGENSESTQEKGDgvEGSNGGDVSMENLQGNKvEDLKEGNNVVENGET 261
Cdd:TIGR00927 658 ENGEESGGEAEQEGETETKGENESEGEIPAERKGEQEGEGEIEAK--EADHKGETEAEEVEHEG-ETEAEGTEDEGEIET 734
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 262 KENnGENVESNNEKEVEGqGESIGDSAIEKNLESKEDVKSEVEAAKNDGSSMTENLGEAQGNNGVSTIDNEKEVEGQGES 341
Cdd:TIGR00927 735 GEE-GEEVEDEGEGEAEG-KHEVETEGDRKETEHEGETEAEGKEDEDEGEIQAGEDGEMKGDEGAEGKVEHEGETEAGEK 812
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 342 IEDSDIEKNLESKEDVKSEveaaknagssmTGKLEEAQRNNGVSTNETMNSENKGSGESTNDKMVNATTNDEDHKKENKE 421
Cdd:TIGR00927 813 DEHEGQSETQADDTEVKDE-----------TGEQELNAENQGEAKQDEKGVDGGGGSDGGDSEEEEEEEEEEEEEEEEEE 881
|
250
....*....|....*.
gi 1063714377 422 ETHENNGESVKGENLE 437
Cdd:TIGR00927 882 EEEEEEEENEEPLSLE 897
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
1285-1656 |
8.33e-07 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 54.53 E-value: 8.33e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1285 DSQADSHSDSQADSDESKNEILMQADSQATTQRNNEEDrkkqtsvaenkkqKETKEEKNKPKDDKKNTTKQSGGKKESME 1364
Cdd:NF033609 560 DSDSDPGSDSGSDSSNSDSGSDSGSDSTSDSGSDSASD-------------SDSASDSDSASDSDSASDSDSASDSDSAS 626
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1365 SESKEAENQQKSQATTQADSDeSKNEILMQADSQADSHSDSQADSDESKNeilmqADSQATTQRNNEEDRKKQTSVAENK 1444
Cdd:NF033609 627 DSDSASDSDSASDSDSDSDSD-SDSDSDSDSDSDSDSDSDSDSDSDSDSD-----SDSDSDSDSDSDSDSDSDSDSDSDS 700
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1445 KQKETKEEKNKPKDDKKNTTEQSGGKKESMESESKEAENQQKSQATTQGESDESKNEILMQADSQADTHANSQGDSDESK 1524
Cdd:NF033609 701 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 780
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1525 NEilmQADSQADSQTDSDESKNeilmqADSQADSQTDSDESKNEILMQADSQAKIGESLEDNKVKGKEDNGDEVGKENSK 1604
Cdd:NF033609 781 DS---DSDSDSDSDSDSDSDSD-----SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 852
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 1063714377 1605 TIEVKGRHEESKDGKTNENGGKEVSTEEGSKDSNIVERNGGKEDSIKEGSED 1656
Cdd:NF033609 853 DSDSESDSNSDSESGSNNNVVPPNSPKNGTNASNKNEAKDSKEPLPDTGSED 904
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
579-844 |
1.14e-06 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 53.85 E-value: 1.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 579 GDHTKEKREETQgNNGESVKNEnlENKEDKKELKDDESVGAKTNNETSLEEKREQTQKGhdnSINSKIVDNKGGNADSNK 658
Cdd:TIGR00927 628 GDLSKGDVAEAE-HTGERTGEE--GERPTEAEGENGEESGGEAEQEGETETKGENESEG---EIPAERKGEQEGEGEIEA 701
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 659 EKEVHVGDSTNDnnmESKEDTKSEVEVKKNDGSSEKGEEGKENNKDSMED--------KKLENKESQTDSKDDKSVDDKQ 730
Cdd:TIGR00927 702 KEADHKGETEAE---EVEHEGETEAEGTEDEGEIETGEEGEEVEDEGEGEaegkheveTEGDRKETEHEGETEAEGKEDE 778
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 731 EEAQIYGGESKDDKSVEAKGKKKESKENKKTKTNENRVRNKEENVQGNKKESEKVEKGEKKESKDaksvETKDNKKLSST 810
Cdd:TIGR00927 779 DEGEIQAGEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQG----EAKQDEKGVDG 854
|
250 260 270
....*....|....*....|....*....|....*...
gi 1063714377 811 ENR----DEAKERSGEDNKEDKEESKDYQSVEAKEKNE 844
Cdd:TIGR00927 855 GGGsdggDSEEEEEEEEEEEEEEEEEEEEEEEEEENEE 892
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
1245-1566 |
1.65e-06 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 53.37 E-value: 1.65e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1245 SGGKKESMESESKEAENQQKSQATTQADSDESKNEILMQADSQADSHSDSQADSDESKNEILMQADSQATTQRNNEEDRK 1324
Cdd:NF033609 569 SGSDSSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDS 648
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1325 KQTSVAENKKQKETKEEKNKPKDDKKNTTKQSGGKKESMESESKEAENQQKSQATTQADSDeSKNEILMQADSQADSHSD 1404
Cdd:NF033609 649 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD-SDSDSDSDSDSDSDSDSD 727
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1405 SQADSDeSKNEILMQADSQATTQRNNEEDRKKQTSVAENKKQKETKEEKNKPKDDKKNTTEQSGGKKESMESESKEAENQ 1484
Cdd:NF033609 728 SDSDSD-SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 806
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1485 QKSQATTQGESDESKNEILMQADSQADTHANSQGDSD-ESKNEILMQADSQADSQTDSDESKNEILMQADSQADSQTDSD 1563
Cdd:NF033609 807 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDsDSDSDSDSDSDSESDSNSDSESGSNNNVVPPNSPKNGTNASN 886
|
...
gi 1063714377 1564 ESK 1566
Cdd:NF033609 887 KNE 889
|
|
| PTZ00341 |
PTZ00341 |
Ring-infected erythrocyte surface antigen; Provisional |
239-429 |
4.48e-06 |
|
Ring-infected erythrocyte surface antigen; Provisional
Pssm-ID: 173534 [Multi-domain] Cd Length: 1136 Bit Score: 52.10 E-value: 4.48e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 239 ENLQGNKVEDLKEgnNVVENGEtkENNGENVESNNEKEVEGQGESIGDSAIEKNLESKEDVKSEVEAAKNDGSSMTENLG 318
Cdd:PTZ00341 953 ENVEEDAEENVEE--NVEENVE--ENVEENVEENVEENVEENVEENVEENVEENIEENVEENVEENIEENVEEYDEENVE 1028
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 319 EAQGNNGVSTIDNEKEVEGQGESIEDSDIEKNLESKEDVKSEvEAAKNAGSSMTGKLEEAQRNNGVSTNETMNSENKGSG 398
Cdd:PTZ00341 1029 EVEENVEEYDEENVEEIEENAEENVEENIEENIEEYDEENVE-EIEENIEENIEENVEENVEENVEEIEENVEENVEENA 1107
|
170 180 190
....*....|....*....|....*....|.
gi 1063714377 399 ESTNDKmvNATTNDEDHKKENKEETHENNGE 429
Cdd:PTZ00341 1108 EENAEE--NAEENAEEYDDENPEEHNEEYDE 1136
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
224-508 |
6.30e-06 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 51.53 E-value: 6.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 224 KGDGVEGSNGGDVSMENlqgNKVEDLKEGNNVVENGETKENNGENVE-SNNEKEVEGQGESIGDSAIEKNLESKEdvkSE 302
Cdd:TIGR00927 632 KGDVAEAEHTGERTGEE---GERPTEAEGENGEESGGEAEQEGETETkGENESEGEIPAERKGEQEGEGEIEAKE---AD 705
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 303 VEAAKNDGSSMTENLGEAQGNNGvstiDNEKEVEGQGESIEDSDiEKNLESKEDVKSEVEAAKNAGSSMTGKLEEAQRNN 382
Cdd:TIGR00927 706 HKGETEAEEVEHEGETEAEGTED----EGEIETGEEGEEVEDEG-EGEAEGKHEVETEGDRKETEHEGETEAEGKEDEDE 780
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 383 GvSTNETMNSENKGsgestNDKMVNATTNDEDHKKENKEETHENNGESVKGENLENKAGNEESMKGENLENKVGNEELKG 462
Cdd:TIGR00927 781 G-EIQAGEDGEMKG-----DEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQDEKGVDG 854
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1063714377 463 nasvEAKTNNESSKEEKREESQRSNEVYMNKETTKGENVNIQGESI 508
Cdd:TIGR00927 855 ----GGGSDGGDSEEEEEEEEEEEEEEEEEEEEEEEEEENEEPLSL 896
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
1506-1864 |
1.14e-05 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 50.68 E-value: 1.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1506 ADSQADTHANSQGDSDESKNEILMQADSQADSQTDSDESKNEilmQADSQADSQTDSDESKNEILMQADSQAKIGESLED 1585
Cdd:NF033609 563 SDPGSDSGSDSSNSDSGSDSGSDSTSDSGSDSASDSDSASDS---DSASDSDSASDSDSASDSDSASDSDSASDSDSASD 639
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1586 NKVKGKEDNGDEVGKENSKTIEVKGRHEESKDGKTNENGGKEVSTEEGSkDSNIVERNGGKEDSIKEGSEDGKTVEINGG 1665
Cdd:NF033609 640 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS-DSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 718
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1666 EELSTEEGSKDGKIEEGKEGKENSTKESSKDGKINEIHGDKEATMEEGSKDGGTNSTGKDSKDSKSVEINGVKDDSLKDD 1745
Cdd:NF033609 719 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 798
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1746 SKNGDINEINNGKEDSVKDNVTEIQGNDNSLTNSTSSEPNGDKLDTNKDSMKNNTMEAQGGSNGDSTNGETEETKESNVS 1825
Cdd:NF033609 799 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSESDSNSDSESGSNNNVVPPNSP 878
|
330 340 350
....*....|....*....|....*....|....*....
gi 1063714377 1826 MNNQNMqdvgsnenSMNNQTTGTGDDIISTTTDTESNTS 1864
Cdd:NF033609 879 KNGTNA--------SNKNEAKDSKEPLPDTGSEDEANTS 909
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
239-1006 |
1.17e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 50.91 E-value: 1.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 239 ENLQGNKVEDLKEGNNVVENGETKENNGENVESNNEKEVE-----GQGESIGDSAIEKNLESKEDvkseveAAKNDGSSM 313
Cdd:PTZ00121 1022 QNFNIEKIEELTEYGNNDDVLKEKDIIDEDIDGNHEGKAEakahvGQDEGLKPSYKDFDFDAKED------NRADEATEE 1095
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 314 TENLGEAQGNNGVSTIDNEKEVEGQGESIEDSDIEKNLESKEDVKSEVEA--AKNAGSSMTGKLEEAQRNNGVSTNETMN 391
Cdd:PTZ00121 1096 AFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEArkAEDAKRVEIARKAEDARKAEEARKAEDA 1175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 392 SENKGSGESTNDKMVNATTNDEDHKKENKEETHENNGESVKGENLENKAGNEESMKGENLENKVGN----EELKGNASVE 467
Cdd:PTZ00121 1176 KKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEakkaEEERNNEEIR 1255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 468 AKTNNESSKEEKREESQRSNEVYMNKETTKGENVNIQGESIGDSTKDNSLENKEDVKPKVDANESDGNSTKERHQEAQVN 547
Cdd:PTZ00121 1256 KFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAK 1335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 548 NGVSTEDKNLDNIGADEQKKNDKS------VEVTTNDGDHTKEKREETQGNNGESVKNENLENKEDKKELKDDESVGAKT 621
Cdd:PTZ00121 1336 KKAEEAKKAAEAAKAEAEAAADEAeaaeekAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAA 1415
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 622 NNETSLEEKREQTQKGHDNSINSKIVDNKGGNADSNKEKEVHVGDSTNDNNMESK---EDTKSEVEVKKNDGSSEKGEEG 698
Cdd:PTZ00121 1416 AKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKkadEAKKKAEEAKKADEAKKKAEEA 1495
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 699 K---ENNKDSMEDKKLENKESQTDSKDDKSVDDKQEEAQIYGGESKDDKSVEAKGKKKESKENKKTKTNENRVRNKEENV 775
Cdd:PTZ00121 1496 KkkaDEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEED 1575
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 776 QGNKKESEKVEKGEKKESKDAKSVETKDNKKLSSTENRDEAKER-SGEDNKEDKEESKDYQSVEAKEKNENGGVD----- 849
Cdd:PTZ00121 1576 KNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKiKAEELKKAEEEKKKVEQLKKKEAEEKKKAEelkka 1655
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 850 ---TNVGNKEDSKDLKDDRSVEVKANKEESMKKKREEVQRNDKSSTKEVRDFANNMDIDVQKG-----SGESVKYKKDEK 921
Cdd:PTZ00121 1656 eeeNKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAeelkkAEEENKIKAEEA 1735
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 922 KEGNKEENKDTINTSSKQKGKDKKKKKKESKNSNMKKKEEDKKEYVNNELKKQE-------DNKKETTKSENSKLKEENK 994
Cdd:PTZ00121 1736 KKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDekrrmevDKKIKDIFDNFANIIEGGK 1815
|
810
....*....|....*.
gi 1063714377 995 DN----KEKKESEDSA 1006
Cdd:PTZ00121 1816 EGnlviNDSKEMEDSA 1831
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
612-883 |
2.45e-05 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 49.61 E-value: 2.45e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 612 KDDESVGAKTNNETSLEEKREQTQKGHDNSINSKIVDNKGGNADSNKEKevhvgdSTNDNNMESKEDTKSEVEV--KKND 689
Cdd:TIGR00927 632 KGDVAEAEHTGERTGEEGERPTEAEGENGEESGGEAEQEGETETKGENE------SEGEIPAERKGEQEGEGEIeaKEAD 705
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 690 GSSEKGEEGKENNKDSMEDKKLENKESQTDSKDDKSVDDKQEEAQ-IYGGESKDDKSVEAKGKKKESKENKKTKTNENRV 768
Cdd:TIGR00927 706 HKGETEAEEVEHEGETEAEGTEDEGEIETGEEGEEVEDEGEGEAEgKHEVETEGDRKETEHEGETEAEGKEDEDEGEIQA 785
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 769 RNKEEnVQGNKKESEKVEKGEKKESKDAKSVETKDNKKLSSTENRDEAKERsgEDNKEDKEESKDyqsveaKEKNENGGV 848
Cdd:TIGR00927 786 GEDGE-MKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQ--ELNAENQGEAKQ------DEKGVDGGG 856
|
250 260 270
....*....|....*....|....*....|....*
gi 1063714377 849 DTNVGNKEDSKDLKDDRSVEVKANKEESMKKKREE 883
Cdd:TIGR00927 857 GSDGGDSEEEEEEEEEEEEEEEEEEEEEEEEEENE 891
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
246-543 |
2.56e-05 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 49.61 E-value: 2.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 246 VEDLKEGNnVVENGETKENNGENVESNNEKEVEGQGESIGDSAIEKNLESKEDVKSEVEAAkndgssmtenlGEAQGnng 325
Cdd:TIGR00927 627 LGDLSKGD-VAEAEHTGERTGEEGERPTEAEGENGEESGGEAEQEGETETKGENESEGEIP-----------AERKG--- 691
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 326 vstiDNEKEVEGQGESIEDSDIEKNLESKEDVKSEVEAAKNAGSSMTGkleeaqrnngvSTNETMNSENKGSGESTNDKM 405
Cdd:TIGR00927 692 ----EQEGEGEIEAKEADHKGETEAEEVEHEGETEAEGTEDEGEIETG-----------EEGEEVEDEGEGEAEGKHEVE 756
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 406 VNATTNDEDHKKENKEETH--ENNGESVKGENLENKAGNEESMKGENLENKVGNEELKGNASVEAKTNNESSKEEKREES 483
Cdd:TIGR00927 757 TEGDRKETEHEGETEAEGKedEDEGEIQAGEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQE 836
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 484 QRSNEVYMNKETTKGenvnIQGESIGDSTKDNSLENKEDVKPKVDANESDGNSTKERHQE 543
Cdd:TIGR00927 837 LNAENQGEAKQDEKG----VDGGGGSDGGDSEEEEEEEEEEEEEEEEEEEEEEEEEENEE 892
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
1516-1759 |
7.60e-05 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 48.07 E-value: 7.60e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1516 SQGDSDESKNEILMQaDSQADSQTDSDESKNEILMQADSQADSQTDSDESKNEILMQADSQAKiGESLEDNKVKGKEDNG 1595
Cdd:TIGR00927 631 SKGDVAEAEHTGERT-GEEGERPTEAEGENGEESGGEAEQEGETETKGENESEGEIPAERKGE-QEGEGEIEAKEADHKG 708
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1596 DEVGKE--NSKTIEVKGRHEEskdGKTNENGGKEVSTEEGSKDSNiverngGKEDSIKEGseDGKTVEINGGEELSTEEG 1673
Cdd:TIGR00927 709 ETEAEEveHEGETEAEGTEDE---GEIETGEEGEEVEDEGEGEAE------GKHEVETEG--DRKETEHEGETEAEGKED 777
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1674 SKDGKIEEGKEGKENSTKESSKDGKINEIHGDKEAtmEEGSKDGGTNSTGKDSKD-SKSVEINGVKDDSLKDDSKNGDIN 1752
Cdd:TIGR00927 778 EDEGEIQAGEDGEMKGDEGAEGKVEHEGETEAGEK--DEHEGQSETQADDTEVKDeTGEQELNAENQGEAKQDEKGVDGG 855
|
....*..
gi 1063714377 1753 EINNGKE 1759
Cdd:TIGR00927 856 GGSDGGD 862
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
1356-1696 |
2.05e-04 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 46.44 E-value: 2.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1356 SGGKKESMESESKEAENQQKSQATTQADSDESKNEILMQADSQADSHSDSQADSDeSKNEILMQADSQATTQRNNEEDRK 1435
Cdd:NF033609 569 SGSDSSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSASDSD-SASDSDSASDSDSASDSDSDSDSD 647
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1436 KQTSVAENKKQKETKEEKNKPKDDKKNTTEQSGGKKESMESESKEAENQQKSQATTQGESDESKNEILMQADSQADTHAN 1515
Cdd:NF033609 648 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 727
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1516 SQGDSDESKNEilmQADSQADSQTDSD-ESKNEILMQADSQADSQTDSDESKNEILMQADSQAKIGESLEDNKVKGKEDN 1594
Cdd:NF033609 728 SDSDSDSDSDS---DSDSDSDSDSDSDsDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 804
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1595 GDEVGKENSKTIEVKGRHEESKDGKTNENGGKEVSTEEGSKDSNIVERNGGKEDSIKEGSEDGKTVEINGGEelSTEEGS 1674
Cdd:NF033609 805 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSESDSNSDSESGSNNNVVPPN--SPKNGT 882
|
330 340
....*....|....*....|..
gi 1063714377 1675 KDGKIEEGKEGKENSTKESSKD 1696
Cdd:NF033609 883 NASNKNEAKDSKEPLPDTGSED 904
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
1383-1730 |
2.28e-04 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 46.44 E-value: 2.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1383 DSDESKNEILMQADSQADSHSDSQADSD-ESKNEILMQADSQATTQRNNEEDRKKQTSVAENKKQKETKEEKNKPKDDKK 1461
Cdd:NF033609 560 DSDSDPGSDSGSDSSNSDSGSDSGSDSTsDSGSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASD 639
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1462 NTTEQSGGKKESMESESKEAENQQKSQATTQGESDESKNEILMQADSQADTHANSQGDSDESKNeilmqADSQADSQTDS 1541
Cdd:NF033609 640 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD-----SDSDSDSDSDS 714
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1542 DESKNeilmqADSQADSQTDSDESKNeilmqADSQAKIGESLEDNKVKGKEDNGDEVGKENSKTIEVKGRHEESKDGKTN 1621
Cdd:NF033609 715 DSDSD-----SDSDSDSDSDSDSDSD-----SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 784
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1622 ENGGKEVSTEEGSKDSNIVERNGGKEDSIKEGSEDGKTVEINGGEELSTEEGSKDGKIEEGKEGKENSTKESSKDGKINE 1701
Cdd:NF033609 785 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSESDSNSDS 864
|
330 340 350
....*....|....*....|....*....|
gi 1063714377 1702 IHGDKEATMEEGSKDGGTNSTGK-DSKDSK 1730
Cdd:NF033609 865 ESGSNNNVVPPNSPKNGTNASNKnEAKDSK 894
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
432-707 |
3.38e-04 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 45.76 E-value: 3.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 432 KGENLENKAGNEESMKGENLENKVGNEELKGNASVEAKTNNESSKEEKREESQRSNEVYMNKETTKGENVNIQGESIGDS 511
Cdd:TIGR00927 641 TGERTGEEGERPTEAEGENGEESGGEAEQEGETETKGENESEGEIPAERKGEQEGEGEIEAKEADHKGETEAEEVEHEGE 720
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 512 TKDNSLENKEDVKPKVDANESDgnstKERHQEAQVNNGVSTEDknlDNIGADEQKKNDKSVEVTTNDGDHTKEKREETQG 591
Cdd:TIGR00927 721 TEAEGTEDEGEIETGEEGEEVE----DEGEGEAEGKHEVETEG---DRKETEHEGETEAEGKEDEDEGEIQAGEDGEMKG 793
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 592 NNGESVKNENLENKEDKKELKDDESVGAKTNNETSLEEKREQtqkghdnsinSKIVDNKGGNADSnkEKEVHVGDSTNDN 671
Cdd:TIGR00927 794 DEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQ----------ELNAENQGEAKQD--EKGVDGGGGSDGG 861
|
250 260 270
....*....|....*....|....*....|....*.
gi 1063714377 672 NMESKEDTKSEVEVKKNDGSSEKGEEGKENNKDSME 707
Cdd:TIGR00927 862 DSEEEEEEEEEEEEEEEEEEEEEEEEEENEEPLSLE 897
|
|
| PTZ00341 |
PTZ00341 |
Ring-infected erythrocyte surface antigen; Provisional |
238-437 |
4.02e-04 |
|
Ring-infected erythrocyte surface antigen; Provisional
Pssm-ID: 173534 [Multi-domain] Cd Length: 1136 Bit Score: 45.55 E-value: 4.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 238 MENLQGNKVEDLKEGNNVVENGETKENNGENVESNNEKEVEGQGESIGDSAIEKNLESKEDVKSEVEAAKNDGSSMTENL 317
Cdd:PTZ00341 928 LKNQNENVPEHLKEHAEANIEEDAEENVEEDAEENVEENVEENVEENVEENVEENVEENVEENVEENVEENVEENIEENV 1007
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 318 GEAQGNNGVSTID--NEKEVEGQGESIEDSDIEKNLESKEDVKSEVE--AAKNAGSSMTGKLEEAQRNNGVSTNETMNSE 393
Cdd:PTZ00341 1008 EENVEENIEENVEeyDEENVEEVEENVEEYDEENVEEIEENAEENVEenIEENIEEYDEENVEEIEENIEENIEENVEEN 1087
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1063714377 394 NKGSGESTNDkmvNATTNDEDHKKENKEETHENNGESVKGENLE 437
Cdd:PTZ00341 1088 VEENVEEIEE---NVEENVEENAEENAEENAEENAEEYDDENPE 1128
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
524-744 |
7.23e-04 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 44.99 E-value: 7.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 524 KPKVDANESDGNSTKERHQEAQVNNGVSTEDKNLD--NIGADEQKKNDKSVEVTTNDGDHTKEKREETQGNNGEsVKNEN 601
Cdd:TIGR00927 632 KGDVAEAEHTGERTGEEGERPTEAEGENGEESGGEaeQEGETETKGENESEGEIPAERKGEQEGEGEIEAKEAD-HKGET 710
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 602 LENKEDKKELKDDEsvGAKTNNETSLEEKREQTQKGHDNSINSKIV-----DNKGGNADSNKEKEVHVGDstNDNNMESK 676
Cdd:TIGR00927 711 EAEEVEHEGETEAE--GTEDEGEIETGEEGEEVEDEGEGEAEGKHEvetegDRKETEHEGETEAEGKEDE--DEGEIQAG 786
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1063714377 677 EDtkseVEVKKNDGSSEKGEEGKENNkdsmEDKKLENKESQTDSKDDKSVDDKQEEAQIYG---GESKDDK 744
Cdd:TIGR00927 787 ED----GEMKGDEGAEGKVEHEGETE----AGEKDEHEGQSETQADDTEVKDETGEQELNAenqGEAKQDE 849
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1248-1518 |
8.56e-04 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 44.54 E-value: 8.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1248 KKESMESESKEAENQQKSQATTQADSDESKNEILMQADSQADSHSDSQADSDESKNEIlmqadSQATTQRNNEEDRKKQT 1327
Cdd:COG1196 240 ELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAEL-----ARLEQDIARLEERRREL 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1328 SVAENKKQKETKEEKNKPKDDKKNTTKQSgGKKESMESESKEAENQQKSQATTQADSDESKNEILMQADSQADSHSDSQA 1407
Cdd:COG1196 315 EERLEELEEELAELEEELEELEEELEELE-EELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALR 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1408 DSDESKNEIL-----MQADSQATTQRNNEEDRKKQTSVAENKKQKETKEEKNKPKDDKKNTTEQSGGKKESMESESKEAE 1482
Cdd:COG1196 394 AAAELAAQLEeleeaEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAA 473
|
250 260 270
....*....|....*....|....*....|....*.
gi 1063714377 1483 NQQKSQATTQGESDESKNEILMQADSQADTHANSQG 1518
Cdd:COG1196 474 LLEAALAELLEELAEAAARLLLLLEAEADYEGFLEG 509
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
334-606 |
9.16e-04 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 44.60 E-value: 9.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 334 EVEGQGESI-EDSDIEKNLESKEDVKSEVEAAKNAGSSMTGKLEeaqrnngvSTNEtMNSENKGSGESTNDkmvnATTND 412
Cdd:TIGR00927 637 EAEHTGERTgEEGERPTEAEGENGEESGGEAEQEGETETKGENE--------SEGE-IPAERKGEQEGEGE----IEAKE 703
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 413 EDHKKENKEETHENNGESvKGENLENKAGNEESMKGENLENKvGNEELKGNASVEAKTNNESSKEEKREESQRSNEVYmN 492
Cdd:TIGR00927 704 ADHKGETEAEEVEHEGET-EAEGTEDEGEIETGEEGEEVEDE-GEGEAEGKHEVETEGDRKETEHEGETEAEGKEDED-E 780
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 493 KETTKGENVNIQGESIGDSTKDNSLENKEDVKPKVDANE---SDGNSTKERHQEAQVNNGVSTEDKNlDNIGADEQKKND 569
Cdd:TIGR00927 781 GEIQAGEDGEMKGDEGAEGKVEHEGETEAGEKDEHEGQSetqADDTEVKDETGEQELNAENQGEAKQ-DEKGVDGGGGSD 859
|
250 260 270
....*....|....*....|....*....|....*..
gi 1063714377 570 KSVEVTTNDGDHTKEKREETQgnngESVKNENLENKE 606
Cdd:TIGR00927 860 GGDSEEEEEEEEEEEEEEEEE----EEEEEEEEENEE 892
|
|
| PTZ00341 |
PTZ00341 |
Ring-infected erythrocyte surface antigen; Provisional |
268-543 |
1.14e-03 |
|
Ring-infected erythrocyte surface antigen; Provisional
Pssm-ID: 173534 [Multi-domain] Cd Length: 1136 Bit Score: 44.01 E-value: 1.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 268 NVESNNEKEVEGQGESIG--DSAIEKNLESKEDVKsevEAAKNDGSSMTENLGeaqgnNGVSTIDneKEVEGQGESIEDS 345
Cdd:PTZ00341 869 SDEGLDEKKLKKRAESLKklANAIEKYAGGGKKDK---KAKKKDAKDLSGNIA-----HEINLIN--KELKNQNENVPEH 938
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 346 dIEKNLESKEDVKSEVEAAKNAGSSMTGKLEEAQRNNgVSTNETMNSENKGSGESTNDKMVNATTNDEDHKKENKEETHE 425
Cdd:PTZ00341 939 -LKEHAEANIEEDAEENVEEDAEENVEENVEENVEEN-VEENVEENVEENVEENVEENVEENVEENIEENVEENVEENIE 1016
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 426 NNGESVKGENLENKAGNEESMKGENLENKVGNEELKGNASVEAKTNNESSKEEKREESQRSNEVYMNKETTKGENVNIQG 505
Cdd:PTZ00341 1017 ENVEEYDEENVEEVEENVEEYDEENVEEIEENAEENVEENIEENIEEYDEENVEEIEENIEENIEENVEENVEENVEEIE 1096
|
250 260 270
....*....|....*....|....*....|....*...
gi 1063714377 506 ESIGDSTKDNSLENKEDvKPKVDANESDGNSTKERHQE 543
Cdd:PTZ00341 1097 ENVEENVEENAEENAEE-NAEENAEEYDDENPEEHNEE 1133
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
496-717 |
1.61e-03 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 43.83 E-value: 1.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 496 TKGENvniqgESIGDSTKDNSLENKEDVKPKVDANESDGNSTKERHQEAQVNNGVSTEDKNLDNIGADEQKKNDKsvEVT 575
Cdd:TIGR00927 675 TKGEN-----ESEGEIPAERKGEQEGEGEIEAKEADHKGETEAEEVEHEGETEAEGTEDEGEIETGEEGEEVEDE--GEG 747
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 576 TNDGDHTKEKREETQGNNGESVKNENLENKEDKKELKDDESVGAKTNNETslEEKREQTQKGHDNSINSKIVDNKGGNAD 655
Cdd:TIGR00927 748 EAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGEIQAGEDGEMKGDEGA--EGKVEHEGETEAGEKDEHEGQSETQADD 825
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1063714377 656 SNKEKEVHVGDSTNDNNMESKEDTKS-EVEVKKNDGSSEKGEEGKENNKDSMEDKKLENKESQ 717
Cdd:TIGR00927 826 TEVKDETGEQELNAENQGEAKQDEKGvDGGGGSDGGDSEEEEEEEEEEEEEEEEEEEEEEEEE 888
|
|
| MDN1 |
COG5271 |
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal ... |
1250-1851 |
2.78e-03 |
|
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444083 [Multi-domain] Cd Length: 1028 Bit Score: 43.08 E-value: 2.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1250 ESMESESKEAENQQKSQATTQADSDESKNEILMQADSQADSHSDSQADSDESKNEILMQADSQATTQRNNEEDRKKQTSV 1329
Cdd:COG5271 350 AATAEDSAAEDTQDAEDEAAGEAADESEGADTDAAADEADAAADDSADDEEASADGGTSPTSDTDEEEEEADEDASAGET 429
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1330 AENKKQKETKEEKNKPKDDKKNTTKQSGGKKESMESESKEAENQQKSQATTQADSDESKNEilmQADSQADSHSDSQADS 1409
Cdd:COG5271 430 EDESTDVTSAEDDIATDEEADSLADEEEEAEAELDTEEDTESAEEDADGDEATDEDDASDD---GDEEEAEEDAEAEADS 506
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1410 DESKNEILMQADSQATTQRNNEEDRKKQTSVAENKKQKETKEEKNKPKDDKKNTTEQSGGKKESMESESKEAENQQKSQA 1489
Cdd:COG5271 507 DELTAEETSADDGADTDAAADPEDSDEDALEDETEGEENAPGSDQDADETDEPEATAEEDEPDEAEAETEDATENADADE 586
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1490 TTQGESDESKNEILMQADSQADTHAN------SQGDSDESKNEILMQADSQADSQTDSDESKNEilmQADSQADSQTDSD 1563
Cdd:COG5271 587 TEESADESEEAEASEDEAAEEEEADDdeadadADGAADEEETEEEAAEDEAAEPETDASEAADE---DADAETEAEASAD 663
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1564 ESKNEILMQADSQAKIGESLEDNKVKGKEDNGDEVGKENSKTIEVKGRHEESKDGKTNENGGKEVSTEEGSKdsniveRN 1643
Cdd:COG5271 664 ESEEEAEDESETSSEDAEEDADAAAAEASDDEEETEEADEDAETASEEADAEEADTEADGTAEEAEEAAEEA------ES 737
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1644 GGKEDSIKEGSEDGKTVEINGGEELSTEEGSKDGKIEEGKEGKENSTKESSKDGKINEIHGDKEATMEEgSKDGGTNSTG 1723
Cdd:COG5271 738 ADEEAASLPDEADAEEEAEEAEEAEEDDADGLEEALEEEKADAEEAATDEEAEAAAEEKEKVADEDQDT-DEDALLDEAE 816
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1724 KDSKDSKSVEINGVKDDSLKDDSKNGDINEINNGKEDSVKDNVTEIQGNDNSLTNSTSSEPNGDKLDTNKDSMKNNTMEA 1803
Cdd:COG5271 817 ADEEEDLDGEDEETADEALEDIEAGIAEDDEEDDDAAAAKDVDADLDLDADLAADEHEAEEAQEAETDADADADAGEADS 896
|
570 580 590 600
....*....|....*....|....*....|....*....|....*...
gi 1063714377 1804 QGGSNGDSTNGETEETKESNVSMNNQNMQDVGSNENSMNNQTTGTGDD 1851
Cdd:COG5271 897 SGESSAAAEDDDAAEDADSDDGANDEDDDDDAEEERKDAEEDELGAAE 944
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
1245-1524 |
4.91e-03 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 42.20 E-value: 4.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1245 SGGKKESMESESKEAENQQKSQATTQADSDeSKNEILMQADSQADSHSDSQADSDESKNeilmqADSQATTQRNNEEDRK 1324
Cdd:NF033609 618 SASDSDSASDSDSASDSDSASDSDSDSDSD-SDSDSDSDSDSDSDSDSDSDSDSDSDSD-----SDSDSDSDSDSDSDSD 691
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1325 KQTSVAENKKQKETKEEKNKPKDDKKNTTKQSGGKKESMESESKEAENQQKSQATTQADSDESKNEILMQADSQADSHSD 1404
Cdd:NF033609 692 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 771
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1405 SQADSD---ESKNEILMQADSQATTQRNNEEDRKKQTSVAENKKQKETKEEKNKPKDDKKNTTEQSGGKKESMESESKEA 1481
Cdd:NF033609 772 SDSDSDsdsDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 851
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 1063714377 1482 ENQQKSQATTQGESDESKNEILMQADSQADTHANSQGDSDESK 1524
Cdd:NF033609 852 SDSDSESDSNSDSESGSNNNVVPPNSPKNGTNASNKNEAKDSK 894
|
|
| PRK08581 |
PRK08581 |
amidase domain-containing protein; |
1355-1561 |
6.26e-03 |
|
amidase domain-containing protein;
Pssm-ID: 236304 [Multi-domain] Cd Length: 619 Bit Score: 41.70 E-value: 6.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1355 QSGGKKESMESESKEAENQQKSQATTQADSDESKNEILMQADSQADSHSDSQADSDESKNEILMQADSQATTQRNNE-ED 1433
Cdd:PRK08581 31 QKDSTAKTTSHDSKKSNDDETSKDTSSKDTDKADNNNTSNQDNNDKKFSTIDSSTSDSNNIIDFIYKNLPQTNINQLlTK 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1434 RKKQTSVAENKKQKETKEEKNKPKDDKKNTTEQSGGKKESMESESKEAENQQKSQATTQGESDESKNEILMQADSQADTH 1513
Cdd:PRK08581 111 NKYDDNYSLTTLIQNLFNLNSDISDYEQPRNSEKSTNDSNKNSDSSIKNDTDTQSSKQDKADNQKAPSSNNTKPSTSNKQ 190
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1063714377 1514 ANSQGDSDESKNEilMQADSQADSQTDSDESKNEilMQADSQADSQTD 1561
Cdd:PRK08581 191 PNSPKPTQPNQSN--SQPASDDTANQKSSSKDNQ--SMSDSALDSILD 234
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
1467-1792 |
8.43e-03 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 41.43 E-value: 8.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1467 SGGKKESMESESKEAENQQKSQATTQGESDESKNEILMQADSQADTHANSQGDSDeSKNEILMQADSQADSQTDSDESKN 1546
Cdd:NF033609 569 SGSDSSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSASDSD-SASDSDSASDSDSASDSDSDSDSD 647
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1547 EilmQADSQADSQTDSDESkneilmqADSQAKIGESLEDNKVKGKEDNGDEVGKENSKTIEVKGRHEESKDGKTNENGGK 1626
Cdd:NF033609 648 S---DSDSDSDSDSDSDSD-------SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 717
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1627 EVSTEEGSKDSNIVERNGGKEDSIKEGSEDGKTVEINGGEELSTEEGSKDGKIEEGKEGKENSTKESSKDGKINEIHGDK 1706
Cdd:NF033609 718 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 797
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1063714377 1707 EATMEEGSKDGGTNSTGKDSKDSKSVEINGVKDDSLKDDSKNGDINEINNGKEDSVKDNVTEIQGNDNSLTNSTSSEPNG 1786
Cdd:NF033609 798 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSESDSNSDSESGSNNNVVPPNS 877
|
....*.
gi 1063714377 1787 DKLDTN 1792
Cdd:NF033609 878 PKNGTN 883
|
|
| |
