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Conserved domains on  [gi|38505194|ref|NP_000946|]
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prostaglandin E2 receptor EP1 subtype [Homo sapiens]

Protein Classification

G protein-coupled receptor family protein( domain architecture ID 705710)

G protein-coupled receptor family protein is a seven-transmembrane G protein-coupled receptor (7TM-GPCR) family protein which typically transmits an extracellular signal into the cell by the conformational rearrangement of the 7TM helices and by the subsequent binding and activation of an intracellular heterotrimeric G protein; GPCR ligands include light-sensitive compounds, odors, pheromones, hormones, and neurotransmitters

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tm_GPCRs super family cl28897
seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary ...
33-358 5.14e-113

seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary model represents the seven-transmembrane (7TM) receptors, often referred to as G protein-coupled receptors (GPCRs), which transmit physiological signals from the outside of the cell to the inside via G proteins. GPCRs constitute the largest known superfamily of transmembrane receptors across the three kingdoms of life that respond to a wide variety of extracellular stimuli including peptides, lipids, neurotransmitters, amino acids, hormones, and sensory stimuli such as light, smell and taste. All GPCRs share a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. However, some 7TM receptors, such as the type 1 microbial rhodopsins, do not activate G proteins. Based on sequence similarity, GPCRs can be divided into six major classes: class A (the rhodopsin-like family), class B (the Methuselah-like, adhesion and secretin-like receptor family), class C (the metabotropic glutamate receptor family), class D (the fungal mating pheromone receptors), class E (the cAMP receptor family), and class F (the frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


The actual alignment was detected with superfamily member cd15144:

Pssm-ID: 475119 [Multi-domain]  Cd Length: 294  Bit Score: 332.12  E-value: 5.14e-113
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194  33 GASPALPIFSMTLGAVSNLLALALLAQAAGRLRRRRSAaTFLLFVASLLATDLAGHVIPGALVLRLYTAGRAPAGG---- 108
Cdd:cd15144   1 PASPAMPIFSMTLGALSNIVALVILAQSYARFRRRSKA-TFLLFASSLVLTDLAGHVIPGALVLRLYLSGQMPAEEprga 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194 109 ACHFLGGCMVFFGLCPLLLGCGMAVERCVGVTRPLLHAARVSVARARLALAAVAAVALAVALLPLARVGRYELQYPGTWC 188
Cdd:cd15144  80 LCQFFGACMVFFGLCPLFLGCAMAVERCVGVTRPLLHSSVVTTTRTKLSLLAIWAVALAVALLPLFRFGRYKPQFPGTWC 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194 189 FIGLGPPGGWRQALLAGLFASLGLVALLAALVCNTLSGLALLrarwrrrsrrpppasgpdsRRRWgahgprsasassass 268
Cdd:cd15144 160 FIKVQPPGSWADVAFALLFSLLGLASLLVSLVCNTISGLTLV-------------------RARL--------------- 205
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194 269 iasastffgGSRSSGSARRARAHDVEMVGQLVGIMVVSCICWSPMLVLVALAVGGWSS---TSLQRPLFLAVRLASWNQI 345
Cdd:cd15144 206 ---------RKKCSCSNRRAKSHDIEMVVQLVGIMVVSCICWSPLLIFVLISVSRSYErpkHQYEKLLFLGVRLASWNQI 276
                       330
                ....*....|...
gi 38505194 346 LDPWVYILLRQAV 358
Cdd:cd15144 277 LDPWVYILLRRAV 289
 
Name Accession Description Interval E-value
7tmA_PGE2_EP1 cd15144
prostaglandin E2 receptor EP1 subtype, member of the class A family of seven-transmembrane G ...
33-358 5.14e-113

prostaglandin E2 receptor EP1 subtype, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostaglandin E2 receptor EP1, also called prostanoid EP1 receptor, is one of four receptor subtypes whose endogenous physiological ligand is prostaglandin E2 (PGE2). Each of these subtypes (EP1-EP4) have unique but overlapping tissue distributions that activate different intracellular signaling pathways. It has been shown that stimulation of the EP1 receptor by PGE2 causes smooth muscle contraction and increased intracellular Ca2+ levels; however, it is still unclear whether EP1 receptor is exclusively coupled to G(q/11), which leading to activation of phospholipase C and phosphatidylinositol hydrolysis. Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320272 [Multi-domain]  Cd Length: 294  Bit Score: 332.12  E-value: 5.14e-113
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194  33 GASPALPIFSMTLGAVSNLLALALLAQAAGRLRRRRSAaTFLLFVASLLATDLAGHVIPGALVLRLYTAGRAPAGG---- 108
Cdd:cd15144   1 PASPAMPIFSMTLGALSNIVALVILAQSYARFRRRSKA-TFLLFASSLVLTDLAGHVIPGALVLRLYLSGQMPAEEprga 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194 109 ACHFLGGCMVFFGLCPLLLGCGMAVERCVGVTRPLLHAARVSVARARLALAAVAAVALAVALLPLARVGRYELQYPGTWC 188
Cdd:cd15144  80 LCQFFGACMVFFGLCPLFLGCAMAVERCVGVTRPLLHSSVVTTTRTKLSLLAIWAVALAVALLPLFRFGRYKPQFPGTWC 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194 189 FIGLGPPGGWRQALLAGLFASLGLVALLAALVCNTLSGLALLrarwrrrsrrpppasgpdsRRRWgahgprsasassass 268
Cdd:cd15144 160 FIKVQPPGSWADVAFALLFSLLGLASLLVSLVCNTISGLTLV-------------------RARL--------------- 205
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194 269 iasastffgGSRSSGSARRARAHDVEMVGQLVGIMVVSCICWSPMLVLVALAVGGWSS---TSLQRPLFLAVRLASWNQI 345
Cdd:cd15144 206 ---------RKKCSCSNRRAKSHDIEMVVQLVGIMVVSCICWSPLLIFVLISVSRSYErpkHQYEKLLFLGVRLASWNQI 276
                       330
                ....*....|...
gi 38505194 346 LDPWVYILLRQAV 358
Cdd:cd15144 277 LDPWVYILLRRAV 289
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
278-351 7.32e-04

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 40.74  E-value: 7.32e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 38505194   278 GSRSSGSARRARAhdVEMVGQLVGIMVVsciCWSPMLVLVALAVGGW---SSTSLQRPLFLAVRLASWNQILDPWVY 351
Cdd:pfam00001 185 QKSSERTQRRRKA--LKTLAVVVVVFIL---CWLPYHIVNLLDSLALdceLSRLLDKALSVTLWLAYVNSCLNPIIY 256
 
Name Accession Description Interval E-value
7tmA_PGE2_EP1 cd15144
prostaglandin E2 receptor EP1 subtype, member of the class A family of seven-transmembrane G ...
33-358 5.14e-113

prostaglandin E2 receptor EP1 subtype, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostaglandin E2 receptor EP1, also called prostanoid EP1 receptor, is one of four receptor subtypes whose endogenous physiological ligand is prostaglandin E2 (PGE2). Each of these subtypes (EP1-EP4) have unique but overlapping tissue distributions that activate different intracellular signaling pathways. It has been shown that stimulation of the EP1 receptor by PGE2 causes smooth muscle contraction and increased intracellular Ca2+ levels; however, it is still unclear whether EP1 receptor is exclusively coupled to G(q/11), which leading to activation of phospholipase C and phosphatidylinositol hydrolysis. Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320272 [Multi-domain]  Cd Length: 294  Bit Score: 332.12  E-value: 5.14e-113
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194  33 GASPALPIFSMTLGAVSNLLALALLAQAAGRLRRRRSAaTFLLFVASLLATDLAGHVIPGALVLRLYTAGRAPAGG---- 108
Cdd:cd15144   1 PASPAMPIFSMTLGALSNIVALVILAQSYARFRRRSKA-TFLLFASSLVLTDLAGHVIPGALVLRLYLSGQMPAEEprga 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194 109 ACHFLGGCMVFFGLCPLLLGCGMAVERCVGVTRPLLHAARVSVARARLALAAVAAVALAVALLPLARVGRYELQYPGTWC 188
Cdd:cd15144  80 LCQFFGACMVFFGLCPLFLGCAMAVERCVGVTRPLLHSSVVTTTRTKLSLLAIWAVALAVALLPLFRFGRYKPQFPGTWC 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194 189 FIGLGPPGGWRQALLAGLFASLGLVALLAALVCNTLSGLALLrarwrrrsrrpppasgpdsRRRWgahgprsasassass 268
Cdd:cd15144 160 FIKVQPPGSWADVAFALLFSLLGLASLLVSLVCNTISGLTLV-------------------RARL--------------- 205
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194 269 iasastffgGSRSSGSARRARAHDVEMVGQLVGIMVVSCICWSPMLVLVALAVGGWSS---TSLQRPLFLAVRLASWNQI 345
Cdd:cd15144 206 ---------RKKCSCSNRRAKSHDIEMVVQLVGIMVVSCICWSPLLIFVLISVSRSYErpkHQYEKLLFLGVRLASWNQI 276
                       330
                ....*....|...
gi 38505194 346 LDPWVYILLRQAV 358
Cdd:cd15144 277 LDPWVYILLRRAV 289
7tmA_Prostanoid_R cd14981
G protein-coupled receptors for prostanoids, member of the class A family of ...
33-358 2.30e-69

G protein-coupled receptors for prostanoids, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320112 [Multi-domain]  Cd Length: 288  Bit Score: 220.58  E-value: 2.30e-69
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194  33 GASPALPIFSMTLGAVSNLLALALLAqaagRLRRRRSAATFLLFVASLLATDLAGHVIPGALVLRLYTAGRAPAGG--AC 110
Cdd:cd14981   1 GESPAPPALMFVFGVLGNLLALIVLA----RSSKSHKWSVFYRLVAGLAITDLLGILLTSPVVLAVYASNFEWDGGqpLC 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194 111 HFLGGCMVFFGLCPLLLGCGMAVERCVGVTRPLLHAARVSVARARLALAAVAAVALAVALLPLARVGRYELQYPGTWCFI 190
Cdd:cd14981  77 DYFGFMMSFFGLSSLLIVCAMAVERFLAITHPFFYNSHVKKRRARLMLGAVWAFALLIASLPLLGLGSYVLQYPGTWCFL 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194 191 GLGpPGGWRQALLAGLFASLGLVALLAALVCNTLSGLALlrarwrrrsrrpppasgpdSRRRWGAHGPRsasassassia 270
Cdd:cd14981 157 DFY-SKNTGDAAYAYLYSILGLLILLVTLLCNLLVIITL-------------------LRMRRRKKRHR----------- 205
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194 271 sastffggsRSSGSARRARAHDVEMVGQLVGIMVVSCICWSPMLVLVALAVGGWSSTSlQRPLFLAVRLASWNQILDPWV 350
Cdd:cd14981 206 ---------RSRRSARRQKRNEIQMVVLLLAITVVFSVCWLPLMIRVLINATGDSEKN-GKTDLLAVRMASWNQILDPWV 275

                ....*...
gi 38505194 351 YILLRQAV 358
Cdd:cd14981 276 YILLRKEV 283
7tmA_FP cd15145
prostaglandin F2-alpha receptor, member of the class A family of seven-transmembrane G ...
40-358 3.60e-53

prostaglandin F2-alpha receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The PGF2-alpha receptor, also called prostanoid FP receptor, is a class A G-protein coupled receptor whose endogenous ligand is prostaglandin F2-alpha. PGF2-alpha binding to this receptor is coupled to the stimulation of phospholipase C (PLC) pathway via G-protein subunit G(q). This leads to the release of inositol trisphosphate (IP3) and diacylglycerol (DAG) which results in increased intracellular Ca2+ levels and activation of PKC. The receptor activation primarily induces uterine contraction and bronchoconstriction, and stimulates luteolysis. Like most prostanoid receptors, the PGF2-alpha receptor has also been implicated in tumor angiogenesis and metastasis.


Pssm-ID: 320273 [Multi-domain]  Cd Length: 290  Bit Score: 178.48  E-value: 3.60e-53
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194  40 IFSMTLGAVSNLLALALLAQAAGRLRRRrSAATFLLFVASLLATDLAGHVIPGALVLRLYTAGRA-----PAGGACHFLG 114
Cdd:cd15145   8 IIFMTVGILSNSLAIAILMKAYQRFRQK-SKASFLLLASGLVITDFFGHLINGTIAVFVYASDKDwirfdQSNILCSVFG 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194 115 GCMVFFGLCPLLLGCGMAVERCVGVTRPLLHAARVSVARARLALAAVAAVALAVALLPLARVGRYELQYPGTWCFIGLGP 194
Cdd:cd15145  87 ICMVFFGLCPLLLGSVMAVERCIGVTKPIFHSTKMTSKHVKMMLSGVCLFAVLVALLPILGHRDYQIQASRTWCFYKTEH 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194 195 PGGWRQALLAGLFASLGLVALLAALVCNTLSGlallrarwrrrsrrpppasgpdsrrrwgahgprsasassassiasaST 274
Cdd:cd15145 167 IEDWEDRFYLLLFSFLGLLALAISFLCNAITG----------------------------------------------IT 200
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194 275 FFGGSRSSGSARRARAHDVEMVGQLVGIMVVSCICWSPMLVLVALAV--GGWSSTSLQRPLFlAVRLASWNQILDPWVYI 352
Cdd:cd15145 201 LLRVKFRSQQHRQGRSHHFEMVIQLLAIMCVSCICWSPFLVTMANIGinGRDSLESCETILF-ALRMATWNQILDPWVYI 279

                ....*.
gi 38505194 353 LLRQAV 358
Cdd:cd15145 280 LLRKAV 285
7tmA_TXA2_R cd15143
thromboxane A2 receptor, member of the class A family of seven-transmembrane G protein-coupled ...
66-358 3.71e-40

thromboxane A2 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The thromboxane receptor, also known as the prostanoid TP receptor, is a class A G-protein coupled receptor whose endogenous ligand is thromboxane A2 (TXA2). TXA2 is the major product of cyclooxygenase metabolite of arachidonic acid that found predominantly in platelets and stimulates platelet aggregation, Ca2+ influx into platelets, and also causes vasoconstriction. TXA2 has been shown to be involved in immune regulation, angiogenesis and metastasis, among many others. Activation of TXA2 receptor is coupled to G(q) and G(13), resulting in the activations of phospholipase C and RhoGEF, respectively. TXA2 receptor is widely distributed in the body and is abundantly expressed in thymus and spleen.


Pssm-ID: 320271 [Multi-domain]  Cd Length: 296  Bit Score: 144.58  E-value: 3.71e-40
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194  66 RRRSAATFLLFVASLLATDLAGHVIPGALVLRLYTAGRA-----PAGGACHFLGGCMVFFGLCPLLLGCGMAVERCVGVT 140
Cdd:cd15143  33 KSRSRSSFLIFLCGLVVTDFLGLLVTGTIVISFHLTNFNwrvvdPDCYLCNFMGLSMVFYGLCPLLLGATMAVERFFGIN 112
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194 141 RPLLHAARVSVARARLALAAVAAVALAVALLPLARVGRYELQYPGTWCFIGLGPPGGwrQALLAGLFASLGLVALLAALV 220
Cdd:cd15143 113 RPFSRSTAMSKRRAWYMVGMVWAFAFLLGLLPILGLGRYTLQYPGSWCFLTLLFDSK--DVAFGLLFSFLGILSVGLSFL 190
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194 221 CNTLSglallrarwrrrsrrpppasgpdsrrrwgahgprsasassassiasASTFFGGSRSSGSARRARAHDVEMVGQLV 300
Cdd:cd15143 191 LNTVS----------------------------------------------VVTLCRVYHDRESVQRRRDSEVEMMVQLL 224
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 38505194 301 GIMVVSCICWSPMLVLVALAV---------GGWSSTSLQRPLFLAVRLASWNQILDPWVYILLRQAV 358
Cdd:cd15143 225 GIMVIASVCWLPLLVFIAQTVlqkppamllAGQIPRLTEKKLLIYLRFATWNQILDPWVYILFRRAV 291
7tmA_PGE2_EP3 cd15146
prostaglandin E2 receptor EP3 subtype, member of the class A family of seven-transmembrane G ...
35-356 2.72e-29

prostaglandin E2 receptor EP3 subtype, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostaglandin E2 receptor EP3, also called prostanoid EP3 receptor, is one of four receptor subtypes whose endogenous physiological ligand is prostaglandin E2 (PGE2). Each of these subtypes (EP1-EP4) have unique but overlapping tissue distributions that activate different intracellular signaling pathways. Stimulation of the EP3 receptor by PGE2 preferentially couples to G(i) protein. This leads to a decrease in adenylate cyclase activity, thereby decreasing cAMP levels, which subsequently produces smooth muscle contraction. Knockout mice studies suggest that the EP3 receptor may act as a systemic vasopressor. Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320274 [Multi-domain]  Cd Length: 308  Bit Score: 115.75  E-value: 2.72e-29
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194  35 SPALPIFSMTLGAVSNLLALALLAQAAgRLRRRRSAATFLLFVASLLATDLAGHVIPGALVLRLYTAGRA-----PAGGA 109
Cdd:cd15146   3 SVAFPITMMITGMVGNALAMLLVYRSY-RKKENKRKRSFLLCIGSLALTDLFGQLLTSPIVISVYLSDRKwervdPSGRL 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194 110 CHFLGGCMVFFGLCPLLLGCGMAVERCVGVTRPLLHAARVSVARARLALAAVAAVALAVALLPLARVGRYELQYPGTWCF 189
Cdd:cd15146  82 CPFFGLCMTVFGLCPLFIASAMAIERALAIRAPHWYSSHMKTRVTKAVLLGIWLAVLAFALLPIAGVGQYTLQWPGTWCF 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194 190 IGLGpPGGWRQALLAGLFASLGLVALLAALVCNTLSglallrarwrrrsrrpppASGPDSRRRWGAhgprsasassassi 269
Cdd:cd15146 162 ISTG-DGEPGNNFFASTFASLGLFSLCVTFSCNLAT------------------IRALVSRCKTKA-------------- 208
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194 270 asastffGGSRSSGSARRARahdVEMVGQLVGIMVVSCICWSPMLVLV-------------ALAVGGWSSTSLQRP--LF 334
Cdd:cd15146 209 -------GASVSSKQWERIT---TETLIQLLGIMCVLSACWSPLLVLMlkmisnhtssehcKSATAPPQSTELQKDcnFF 278
                       330       340
                ....*....|....*....|...
gi 38505194 335 L-AVRLASWNQILDPWVYILLRQ 356
Cdd:cd15146 279 LtAVRLASLNQILDPWVYLLLRK 301
7tmA_PGE2_EP4 cd15142
prostaglandin E2 receptor EP4 subtype, member of the class A family of seven-transmembrane G ...
33-358 2.79e-23

prostaglandin E2 receptor EP4 subtype, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostaglandin E2 receptor EP4, also called prostanoid EP4 receptor, is one of four receptor subtypes whose endogenous physiological ligand is prostaglandin E2 (PGE2). Each of these subtypes (EP1-EP4) have unique but overlapping tissue distributions that activate different intracellular signaling pathways. Like the EP2 receptor, stimulation of the EP4 receptor by PGE2 causes cAMP accumulation through G(s) protein activation. Knockout studies in mice suggest that EP4 receptor may be involved in the maintenance of bone mass and fracture healing. Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320270 [Multi-domain]  Cd Length: 302  Bit Score: 98.73  E-value: 2.79e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194  33 GASPALPIFSMTLGAVSNLLALALLAQAagrlRRRRSAATFLLFVASLLATDLAGHVIPGALVLRLYTAGRAPAGGA-CH 111
Cdd:cd15142   1 ATPPTIPAVMFIFGVVGNLIAIVVLCKS----RKEQKETTFYTLVCGLAVTDLLGTCLASPVTIATYLKGRWPGGQPlCE 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194 112 FLGGCMVFFGLCPLLLGCGMAVERCVGVTRPLLHAARVSVARARLALAAVAAVALAVALLPLARVGRYELQYPGTWCFIg 191
Cdd:cd15142  77 YFSFILLFFSLSGLSIICAMSIERYLAINHAYFYNHYVDKRLAGLTLFAIYASNILFCALPSMGLGKSKLQYPKTWCFI- 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194 192 lgppgGWRQALLAG-----LFASLGLVALLAALVCNTLSGLALLRARWRRRsrrpppasgpdsRRRWGAHGPRSasassa 266
Cdd:cd15142 156 -----DWRTNVSVHaaysyMYAGFSSLLILVTVLCNVLVCGALIRMHRQFV------------RRTSLGTDQRL------ 212
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194 267 ssiasastffGGSRSSGSARRARAHDVEMVGQLVGIMVVSCICWSPMLVLV---ALAVGGWSSTSLQRPLFLAVRLASWN 343
Cdd:cd15142 213 ----------SDFRRRRSFRRMAGAEIQMVILLIATSVVVLICSIPLVVRVfvnQLYQPAVEKDLDKNPDLQAIRIASVN 282
                       330
                ....*....|....*
gi 38505194 344 QILDPWVYILLRQAV 358
Cdd:cd15142 283 PILDPWIYILLRKTV 297
7tmA_PGE2_EP2 cd15139
prostaglandin E2 receptor EP2 subtype, member of the class A family of seven-transmembrane G ...
33-358 4.25e-16

prostaglandin E2 receptor EP2 subtype, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostaglandin E2 receptor EP2, also called prostanoid EP2 receptor, is one of four receptor subtypes whose endogenous physiological ligand is prostaglandin E2 (PGE2). Each of these subtypes (EP1-EP4) have unique but overlapping tissue distributions that activate different intracellular signaling pathways. Stimulation of the EP2 receptor by PGE2 causes cAMP accumulation through G(s) protein activation, which subsequently produces smooth muscle relaxation and mediates the systemic vasodepressor response to PGE2. Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320267 [Multi-domain]  Cd Length: 299  Bit Score: 78.28  E-value: 4.25e-16
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194  33 GASPALPIFSMTLGAVSNLLALALLAQAAgRLRRRRSAATFLLFVASLLATDLAGHVIPGALVLRLYTA-----GRAPAG 107
Cdd:cd15139   1 GGSPAISALMFSAGVLGNVLALVLLERRR-RKEVGRRQSLFHVLVTSLVITDLLGTCLISPVVLASYSRnttlvGMSPNR 79
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194 108 GACHFLGGCMVFFGLCPLLLGCGMAVERCVGVTRPLLHAARVSVARARLALAAVAAVALAVALLPLARVGRYeLQY-PGT 186
Cdd:cd15139  80 LVCGYFGFAMTFFSLATMLILLAMALERCLSIGHPYFYERYVSKRCGYVTIPLIYLLCALFCLFPFLGFGKY-VQYcPGT 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194 187 WCFIGLGPPGGWRQALlAGLFASLGLVALLAALVCNTLSGLALLRArwrrrsrrpppasgpdsRRRWGAHGPRSasassa 266
Cdd:cd15139 159 WCFIDMNPEASEHRAY-ANLYATLLLLLIVAVVLCNASVIYHLVRM-----------------YRRRKRNRSSV------ 214
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194 267 ssiasastffGGSRSSGSARRARAHDVEMVGQLVGIMVVSCICWSPMLVLVALAVGGWSSTslQRPLFLAVRLASWNQIL 346
Cdd:cd15139 215 ----------GGRARSHRRRFSMAEEVEHLILLVFMTIIFVICSLPLTIQVYMNTFSDSEN--HKWDLIALRFLSVNPII 282
                       330
                ....*....|..
gi 38505194 347 DPWVYILLRQAV 358
Cdd:cd15139 283 DPWVFIILSPPV 294
7tmA_PGI2 cd15141
prostaglandin I2 receptor, member of the class A family of seven-transmembrane G ...
63-358 3.16e-13

prostaglandin I2 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostaglandin I2 receptor (also called prostacyclin receptor or prostanoid IP receptor) is a class A, G protein-coupled receptor whose endogenous ligand is prostacyclin, which is the major product of cyclooxygenase metabolite of arachidonic acid that found predominantly in platelets and vascular smooth muscle cells (VSMCs). The PGI2 receptor is coupled to both G(s) and G(q) protein subtypes, resulting in increased cAMP formation, phosphoinositide turnover, and Ca2+ signaling. PGI2 receptor activation by prostacyclin induces VSMC differentiation and produces a potent vasodilation and inhibition of platelet aggregation.


Pssm-ID: 320269 [Multi-domain]  Cd Length: 301  Bit Score: 69.85  E-value: 3.16e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194  63 RLRRRRSAATFLLFVASLLATDLAGHVIPGALVLRLYT-----AGRAPAGGACHFLGGCMVFFGLCPLLLGCGMAVERCV 137
Cdd:cd15141  29 RKERRTKSSAFCVLVTGLAATDLLGTCFLSPMVFVSYAqnsslLGLAAGQPLCHLFAFAMTFFGLASMLILFAMAVERCL 108
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194 138 GVTRPLLHAARVSVARARLALAAVAAVALAVALLPLARVGRYELQYPGTWCFIGLGPPGGWRQALLAG--LFASLGLVAL 215
Cdd:cd15141 109 AISHPYFYAQHSGRRLAKLALPAIYAFGALFCALPLLGVGRHKQYCPGTWCFIRMTVPGHREPGSLAFslLYASLMALLI 188
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194 216 LAALVCNTlsglallrarwrrRSRRPPPASGPDSRRRWGAhgprsasassassiasastfFGGSRSSGSARRARAHDVEM 295
Cdd:cd15141 189 AAIFLCNG-------------SVTVSLCRMYRGQKARRGS--------------------LRRCGRLGWWLGQGEEEVDH 235
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 38505194 296 VGQLVGIMVVSCICWSPMLVLVALavGGWSSTSLQRPLFLAVRLASWNQILDPWVYILLRQAV 358
Cdd:cd15141 236 LILLALMTVIFVVCSLPLTIRAFL--GAIAPDGNESGDLLAFRFSAFNPILDPWIFIIFRKAV 296
7tmA_PGD2 cd15140
prostaglandin D2 receptor, member of the class A family of seven-transmembrane G ...
67-358 5.98e-06

prostaglandin D2 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostaglandin D2 receptor (also called prostanoid DP receptor, DP1, or PGD2R1) is a G-protein coupled receptor whose endogenous ligand is prostaglandin D2 (PGD2). PGD2, the major cyclooxygenase metabolite of arachidonic acid produced by mast cells, mediates inflammatory reactions in response to allergen challenge and causes peripheral vasodilation. PGD2 exerts its biological effects by binding to two types of cell surface receptors: a DP1 receptor that belongs to the prostanoid receptor family and a chemoattractant receptor-homologous molecule expressed on the T-helper type 2 cells (CRTH2 or PD2R2).


Pssm-ID: 320268 [Multi-domain]  Cd Length: 312  Bit Score: 47.58  E-value: 5.98e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194  67 RRSAATFLLFVASLLATDLAGHVIPGALVLRLYTAGR-----APAGGA--CHFLGGCMVFFGLCPLLLGCGMAVERCVGV 139
Cdd:cd15140  39 RPRTSVFYVLVTVLTVTDLLGKCLLSPVVLAAYAQNRslvglTPAGNLnlCQVFAFLMIFFGLASTFILLAMALECWLSL 118
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194 140 TRPLLHAARVSVARARLALAAVAAVALAVALLPLARVGRYELQYPGTWCFIGLGPPGGWRQALL-AGLFASLGLVALLAA 218
Cdd:cd15140 119 GHPFFYQRHINKRLGALVSLILYAFCLGFCALPFFGFGRYVQYCPGTWCFIQMTAEESSTSALAySVLYGSLMGLLVLAI 198
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194 219 LVCNTLSGLALLRARwrrrsrrpppasgpdsrRRWGAHGprsasassassiaSASTFFGGSRSSGsaRRARAHDVEMVGQ 298
Cdd:cd15140 199 VLCNLGIMRNLYQMY-----------------RRENEKG-------------IPSTDLQGAAAFP--RQQEPAGMEELEH 246
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 38505194 299 LV--GIM-VVSCICWSPmlVLVALAVGGWSSTSLQRPLFLAVRLASWNQILDPWVYILLRQAV 358
Cdd:cd15140 247 LIllALMtVLFTACSLP--VIARAYVGAFKGEKNEAADLTALRFLSVNSIVDPWIFIIFRTSK 307
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
278-351 7.32e-04

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 40.74  E-value: 7.32e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 38505194   278 GSRSSGSARRARAhdVEMVGQLVGIMVVsciCWSPMLVLVALAVGGW---SSTSLQRPLFLAVRLASWNQILDPWVY 351
Cdd:pfam00001 185 QKSSERTQRRRKA--LKTLAVVVVVFIL---CWLPYHIVNLLDSLALdceLSRLLDKALSVTLWLAYVNSCLNPIIY 256
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
65-150 2.38e-03

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 39.58  E-value: 2.38e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194  65 RRRRSaaTFLLFVASLLATDL--AGHVIPgALVLRLYTAGRAPAGGACHFLGGCMVFFGLCPLLLGCGMAVERCVGVTRP 142
Cdd:cd00637  27 RRLRT--VTNYFILNLAVADLlvGLLVIP-FSLVSLLLGRWWFGDALCKLLGFLQSVSLLASILTLTAISVDRYLAIVHP 103

                ....*...
gi 38505194 143 LLHAARVS 150
Cdd:cd00637 104 LRYRRRFT 111
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
65-150 9.26e-03

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 37.66  E-value: 9.26e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 38505194    65 RRRRSAATFllFVASLLATDLAGHV--IPGALVlRLYTAGRAPAG-GACHFLGGCMVFFGLCPLLLGCGMAVERCVGVTR 141
Cdd:pfam00001  13 KKLRTPTNI--FLLNLAVADLLFSLltLPFWLV-YYLNHGDWPFGsALCKIVGALFVVNGYASILLLTAISIDRYLAIVH 89

                  ....*....
gi 38505194   142 PLLHAARVS 150
Cdd:pfam00001  90 PLRYKRRRT 98
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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