|
Name |
Accession |
Description |
Interval |
E-value |
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
126-883 |
0e+00 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 683.35 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 126 MSPSVISAARPDDWVYQTPHSVSVIGREQIERNPPRHAADMLEETPGVYSSVSQQDPGLSVNIRGIQDYgRVNMSVDGMR 205
Cdd:TIGR01785 1 LDTVTVTATRTRQVLSEAPASVSVISGEQIESKQANNLADALNTVPGVDVTGGGRPPGQSINIRGLQDN-RVLVVVDGAR 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 206 QNYQQSGHQqrNGTLYVDPELLSEVVIDKGASSAMGGAGVIGGIANFRTLEARDLVRPGKQVGGRVRLTSGLGGDANGTH 285
Cdd:TIGR01785 80 QNYQRGGAH--NGSLFVDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDAADLLRPGQLFGGLAKLSYGSNNNSFGGS 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 286 FIGSAAFaigTEVWDMLVAASERHLGDYDPGTKgsigelrtgawfnpeagqrvkhSPVAYSGYVMRSRLAKLGVALPQDQ 365
Cdd:TIGR01785 158 VAVAGRL---DDNLDALVAATYRDGGNYRNGNK----------------------EEATNSAYVQKNLLAKLGWQLDDAQ 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 366 RLQFSYLTTQVSYDDA--NMLNTEN-QALWEKLGSSDVRAQNFAIDYGYAP-DNPLVDFKAKLYYVDNRNRQQTLQRGit 441
Cdd:TIGR01785 213 RLEFSYFTTEGSLDEAqnSGPGTEYvLGSSSTLLASSTRDRSATLTYNWTPeDNPWLDATASLYYNRTENDNDRSARG-- 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 442 PGYSITYQTDTYGAQAQNTSTFALDDLSTLraNYGLEFFYDKVRPDSSQPRASTSAVGFPaaegmtPKGDRALGSLFARL 521
Cdd:TIGR01785 291 VGREEGYQYTTYGATLQNTSRFDVASWSTL--TYGVDWMKDKRRTESFDPNSVTTIVPNP------PSAKEYFFGLFLQD 362
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 522 DYD-YDDWLNLNAGLRYDRYRLRGDTGFNartfilgttrqtdmplQYAVDREEGRFSPTFGLSVKPgVDWLQLFATYGKG 600
Cdd:TIGR01785 363 NIPlLDDRLTLSAGLRYDHYKLSPKTTAD----------------TEAVDRSYSRWSPSLGLSYKP-VDWLTLYASYSQG 425
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 601 WRPPAVTESLITGRPHG-GGAENMYPNPFLSPERSKAWEVGFNVLKENLWFSDDRLGLKVAYFDTRVDDFIFMGMGMQPP 679
Cdd:TIGR01785 426 FRAPSIDELYGTGDHPGtPGGYTFAPNPNLKPETSKTWELGANLSFDNLLLDNDQLQFKVAYFYNDVKDFIDLTIGVTDN 505
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 680 GYgmAGIGN-SAYVnNLDSTRFRGVEYQLDYDAGLAYGQLSYTHMIGSNdfCSKTAWLGGvtqtvkgsgrrppvidmrpd 758
Cdd:TIGR01785 506 VT--AGMNNiTQYV-NIDGARIRGIEASASYDAGLWATGLSYGYTIGKD--QNTNQWLSN-------------------- 560
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 759 eqanaathcsavlgsaehMPMDRGSLTLGMRFFDRRLDVGARARYSEGYSVAGGaTVSQAGVYPADWKEYTVYDLYGSYR 838
Cdd:TIGR01785 561 ------------------IPPLKLVVTVGYRFPDRRLDLGAKAAYYERQSESPT-TEDVAANGLLTTPGYTVVDLYATYQ 621
|
730 740 750 760
....*....|....*....|....*....|....*....|....*..
gi 987818758 839 VSD--ELTLRLAMENVTDRAYLVPLGDVLAFTlgrGRTLQGTLEYQF 883
Cdd:TIGR01785 622 PNAvkGLTVRFGVNNLTDRKYTPAQSVPGAGP---GRNFKGSVKYQF 665
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
130-863 |
1.13e-72 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 251.67 E-value: 1.13e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 130 VISAARPDDWVYQTPHSVSVIGREQIERNPPRHAADMLEETPGVYSSvSQQDPGLSVNIRGIQDYG-RVNMSVDGMRQNY 208
Cdd:COG1629 5 VVTATRTDESLQDVPGSVSVISREQLEDQPATDLGDLLRRVPGVSVT-SAGGGAGQISIRGFGGGGnRVLVLVDGVPLND 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 209 QQSGHQQRNgtlYVDPELLSEVVIDKGASSAMGGAGVIGGIANFRTLeardlvRPGKQVGGRVRLTSGLGGDANgthfiG 288
Cdd:COG1629 84 PSGGDGGLS---YIDPEDIERVEVLRGPSSALYGSGALGGVINIVTK------KPKDGKGGEVSASYGSYGTYR-----A 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 289 SAAFAIGTEVWDMLVAASERHLGDYdpgtkgsigelrtgawfnpeagqrvkhspVAYSGYVMRSRLAKLGVALPQDQRLQ 368
Cdd:COG1629 150 SLSLSGGNGKLAYRLSASYRDSDGY-----------------------------RDNSDSDRYNLRAKLGYQLGDDTRLT 200
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 369 FSYLTTQVSYDDANMLNTENQALWE---------KLGSSDVRAQNFAIDYGYAPDNPLVDFKAKLYYVDNRNR----QQT 435
Cdd:COG1629 201 LSASYSDSDQDSPGYLTLAALRPRGamddgtnpySNDTDDNTRDRYSLSLEYEHLGDGLKLSASAYYRYDDTDldsdFTP 280
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 436 LQRGITPGYSITYQTDTYGAQAQNTSTFALDDLSTLRanYGLEFFYDKVRpDSSQPRASTSAVGFPAAEGMTPKGDRALG 515
Cdd:COG1629 281 TPADGGTLEQTDFDNRTYGLELRLTYDLGFGGKHTLL--VGLDYQRQDLD-GSGYPLDLGSGSLPTLTSGADDDGTTTSL 357
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 516 SLFARLDYDYDDWLNLNAGLRYDRYRLRGDTGFNARTFILGttrqtdmplqyavDREEGRFSPTFGLSVKPgVDWLQLFA 595
Cdd:COG1629 358 ALYAQDTYKLTDKLTLTAGLRYDYVSYDVDDTVTGTDSASG-------------SRSYSAFSPSLGLTYQL-SPNLSLYA 423
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 596 TYGKGWRPPAVTESLITgrphgGGAENMYPNPFLSPERSKAWEVGFnvlkeNLWFSDDRLGLKVAYFDTRVDDFIFmgmg 675
Cdd:COG1629 424 SYSRGFRAPTFGELYAN-----GTDPYSVGNPDLKPETSTNYELGL-----RYRLLDGRLSLSLALFYSDVDNEIL---- 489
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 676 mqpPGYGMAGIGNSAYVNNLDSTRFRGVEYQLDYDAGLA-YGQLSYTHMIGSNDfcsktawlGGVTQTVKGSGRRPPvid 754
Cdd:COG1629 490 ---SVPLPNDSGFSTYYTNAGKARSYGVELELSYQLTPGlSLNASYSYTDAKFD--------DDTDGSADLDGNRLP--- 555
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 755 mrpdeqanaathcsavlgsaeHMPMDRGSLTLGMRFFDrRLDVGARARYSEGYSVAGGATVSQAGvypadwkEYTVYDLY 834
Cdd:COG1629 556 ---------------------GVPPLTANLGLTYEFPG-GWSLGLGVRYVGDRYLDDANTQGAPG-------GYTLVDLG 606
|
730 740
....*....|....*....|....*....
gi 987818758 835 GSYRVSDELTLRLAMENVTDRAYLVPLGD 863
Cdd:COG1629 607 AGYRFGDNLTLSLGVDNLFDKKYATSLSV 635
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
146-883 |
4.98e-59 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 213.08 E-value: 4.98e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 146 SVSVIGREQIERNPPRHAADMLEETPGVYSSVSQQDPGLSVNIRGIQDYgRVNMSVDGMRQNyqQSGHQQRNGTLYVDPE 225
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRRIPGVSVTRGGGGGGSTISIRGFGPD-RTLVLVDGLPLA--SSNYGRGVDLNTIPPE 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 226 LLSEVVIDKGASSAMGGAGVIGGIANFRTleardlVRPGKQVGGRVRLTSG--LGGDANGTHFIGSAAFAiGTEVWDMLV 303
Cdd:cd01347 78 LIERVEVLKGPSSALYGSGAIGGVVNIIT------KRPTDEFGGSVTAGYGsdNSGSSGGGGFDVSGALA-DDGAFGARL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 304 AASERHLGDYDPGTkgsigelrtgawfnpeagqrvkhSPVAYSGYVMRSRLAKLGVALPQDQRLQFSYLTTQVSYDDANM 383
Cdd:cd01347 151 YGAYRDGDGTIDGD-----------------------GQADDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGG 207
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 384 LN-------------TENQALWEKLGSSDVRAQNFAIDYGYAPDNPLVDFKAKLYYVDNRNRQQTL----------QRGI 440
Cdd:cd01347 208 TLpangtgsslgggpSSNTNGDRDWDYRDRYRKRASLGLEHDLNDTGWTLRANLSYSYTDNDGDPLilnggnnaagGDLG 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 441 TPGYSITYQTDTYGAQAQNTSTFALDDLStLRANYGLEFFYDKVRPDSSqprastsavgfpaaegmtpkgdralgSLFAR 520
Cdd:cd01347 288 RSGYSSERDTTQLGFDAGLNAPFGTGPVA-HTLTLGVEYRREELDEKQT--------------------------ALYAQ 340
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 521 LDYDYDDWLNLNAGLRYDRYRLRGDTGFNARTfilgttrqtdmplqyAVDREEGRFSPTFGLSVKPGvDWLQLFATYGKG 600
Cdd:cd01347 341 DTIELTDDLTLTLGLRYDHYDQDSKDTIAGGT---------------TAKKSYSHWSPSLGLVYKLT-DGLSLYASYSQG 404
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 601 WRPPAVTESLITGRPHGGGAenmYPNPFLSPERSKAWEVGFNvlkenlWFSDDRLGLKVAYFDTRVDDFIFmgmgmqpPG 680
Cdd:cd01347 405 FRAPSLGELYGGGSHGGTAA---VGNPNLKPEKSKQYELGLK------YDPGDGLTLSAALFRIDIKNEIV-------ST 468
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 681 YGMAGIGNSAYVNNLDSTRFRGVE----YQLDYDAGLaYGQLSYTHMIGSNDFCSKTawlggvtqtvkgsGRRPPVIdmr 756
Cdd:cd01347 469 PTNTGLGLVTVYVNGGKARIRGVEleasYDLTDGLGL-TGSYTYTDTEVKRTDGATT-------------GNRLPGI--- 531
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 757 pdeqanaathcsavlgsaehmPMDRGSLTLGMRFFDRRLDVGARARYSEGYSVaggatVSQAGVYPADWKEYTVYDLYGS 836
Cdd:cd01347 532 ---------------------PKHTANLGLDYELPDEGLTAGGGVRYRGKQYA-----DTANGNNTVKVPGYTLVDLSAS 585
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|
gi 987818758 837 YRVSDELTLRLAMENVTDRAY---LVPLGDVLAFTLGRGRTLQGTLEYQF 883
Cdd:cd01347 586 YQFTKNLTLRLGVNNLFDKDYytsLSVRGSGLYGYYGPGRTYYLSVSYKF 635
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
370-882 |
6.04e-41 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 157.62 E-value: 6.04e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 370 SYLTTQVSYDDANMLNTENQALWEKLGSSDVRAQNFAIDYGYAPDNPL---VDFKAKLYYVDNRNRQQTLQRGITPGYSI 446
Cdd:pfam00593 28 LDLGLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLswlSTLRLGLRYSSLDGDYTSNSSGLSGAGDY 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 447 TYQTDTYGAQAQNTSTFALDDLsTLRANYGLEFFYDKVRPDSSQPRASTSAVGFPAAEGMTPKGDRALGSLFARLDYDYD 526
Cdd:pfam00593 108 LSDDRLYGLYGLDGDLELSLDL-SHDLLLGVELRTAGLDYRRLDDDAYDPYDPANPSSSSYSDTTTDSYGLYLQDNIKLT 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 527 DWLNLNAGLRYDRYRLRGDTGFNARTfilgttrqtdmplqyAVDREEGRFSPTFGLSVKPgVDWLQLFATYGKGWRPPAV 606
Cdd:pfam00593 187 DRLTLTLGLRYDHYSTDGDDGNGGGD---------------NFSRSYSAFSPRLGLVYKP-TDNLSLYASYSRGFRAPSL 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 607 TEsLITGRPHGGGAENMYPNPFLSPERSKAWEVGFNvlkenlwFSDDRLGLKVAYFDTRVDDFIFMGMGMQPPGygmagi 686
Cdd:pfam00593 251 GE-LYGSGSGGGGGAVAGGNPDLKPETSDNYELGLK-------YDDGRLSLSLALFYIDIKNLITSDPDGPGLG------ 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 687 GNSAYVNNLDSTRFRGVEYQLDYD---AGLAYGQLSYTHmigsndfcsktawlGGVTQTVKGSGRRPPVIdmrpdeqana 763
Cdd:pfam00593 317 GTVYTYTNVGKARIRGVELELSGRlwgLGLSGGGYTYTD--------------ADDDADADDTGNPLPNV---------- 372
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 764 athcsavlgsaehmPMDRGSLTLGMRFFDRRLDVGARARYsegysVAGGATVSQAGVYPADWKEYTVYDLYGSYRVSDEL 843
Cdd:pfam00593 373 --------------PRHTANLGLTYDFPLGGWGARLGARY-----VGSGERRYGDAANTFKTPGYTLVDLSAGYRLNKNL 433
|
490 500 510 520
....*....|....*....|....*....|....*....|..
gi 987818758 844 TLRLAMENVTDRA---YLVPLGDVLAFTLGRGRTLQGTLEYQ 882
Cdd:pfam00593 434 TLRLGVNNLFDKYykrYYSSGGGNLGGYPGPGRTFYLGLSYK 475
|
|
| STN |
smart00965 |
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of ... |
67-117 |
4.85e-05 |
|
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of the Secretins of the bacterial type II/III secretory system as well as the TonB-dependent receptor proteins. These proteins are involved in TonB-dependent active uptake of selective substrates.
Pssm-ID: 198033 [Multi-domain] Cd Length: 52 Bit Score: 41.72 E-value: 4.85e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 987818758 67 VQVFFDSQRFAGLGSAAVHGEYLLADGLSQMLQGSPVEYRFSGKDQLSLIR 117
Cdd:smart00965 1 LNFVYDPALVAGRRVSLLLGNVTVEQALDRLLAGTGLTYRRIGGNTIVLSP 51
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
128-855 |
6.39e-05 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 46.80 E-value: 6.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 128 PSVISAARPDDWVYQTPHSVSVIGREQIERNPPRHAADMLEETPGVYSSvSQQDPGLSVNIRGIqDYGRVNMSVDGMRQN 207
Cdd:PRK10064 32 TMVVTASAVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLT-NEGDNRKGVSIRGL-DSSYTLILIDGKRVN 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 208 YQQSGHQQRNGTL-YVDPELLSEVVIDKGASSAMGGAGVIGGIANFRTLEArdlvrpGKQVGGRVRLTSGL-----GGDA 281
Cdd:PRK10064 110 SRNAVFRHNDFDLnWIPVDAIERIEVVRGPMSSLYGSDALGGVVNIITKKI------GQKWHGTVTVDTTIqehrdRGDT 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 282 NGTHFIGSAAFAIGTEVWDMLVAASERHLGDYDPGTKGSIGElrtgawfnpeagqrvkhsPVAYSGYVMRSRLAKLGVAL 361
Cdd:PRK10064 184 YNGQFFTSGPLIDGVLGMKAYGSLAKREKDDPQNSTTTDTGE------------------TPRIEGFTSRDGNVEFAWTP 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 362 PQDQRLQFSYLTTQVSYD----DANMLNTENQALweklgssdvrAQNFAIDYGyapdnplvDFKAKLY--YVDNRNRQQT 435
Cdd:PRK10064 246 NQNHDFTAGYGFDRQDRDsdslDKNRLERQNYSL----------SHNGRWDYG--------NSELKYYgeKVENKNPGNS 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 436 lqrgitpgYSITYQTDTYGAQAqntsTFALDDLSTLrANYGLEFFYDKVrpdsSQPRASTSavgfpaaeGMTPKGDRALG 515
Cdd:PRK10064 308 --------SPITSESNSIDGKY----TLPLTAINQF-LTFGGEWRHDKL----SDAVNLTG--------GTSSKTSASQY 362
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 516 SLFARLDYDYDDWLNLNAGLRYDRYRLRGDtgfnartfilgttrqTDMPLQYAVdreegrFSPTFGLSVKPGvdwlqlfa 595
Cdd:PRK10064 363 ALFVEDEWRIFEPLALTTGVRMDDHETYGD---------------HWSPRAYLV------YNATDTVTVKGG-------- 413
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 596 tYGKGWRPPavteSLITGRPHGG-----GAENMYPNPFLSPERSKAWEVGFNVLKENLWFsdDRLGLKVAYFDTRVDDFI 670
Cdd:PRK10064 414 -WATAFKAP----SLLQLSPDWTsnscrGACKIVGSPDLKPETSESWELGLYYMGEEGWL--EGVESSVTVFRNDVDDRI 486
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 671 FMGMGMQP---PGY----GMAGIGNSAYV-----NNLDSTRFRGVEYQLDYDAGLAYG-QLSYTHMIGSNdfcsktawlg 737
Cdd:PRK10064 487 SISRTSDVnaaPGYqnfvGFETNGRGRRVpvfryYNVNKARIQGVETELKIPFNDEWKlSLNYTYNDGRD---------- 556
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 738 gvtqtVKGSGRRPpvidmrpdeqanaathcsavlgsAEHMPMDRGSLTLGMRFFD-RRLDVGARARYSeGYSVAGGATVS 816
Cdd:PRK10064 557 -----VSNGENKP-----------------------LSDLPFHTANGTLDWKPLAlEDWSFYVSGNYT-GQKRADSATAK 607
|
730 740 750
....*....|....*....|....*....|....*....
gi 987818758 817 QAGvypadwkEYTVYDLYGSYRVSDELTLRLAMENVTDR 855
Cdd:PRK10064 608 TPG-------GYTIWNTGAAWQVTKDVKLRAGVLNLGDK 639
|
|
| STN |
pfam07660 |
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of ... |
68-110 |
3.90e-03 |
|
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of the Secretins of the bacterial type II/III secretory system as well as the TonB-dependent receptor proteins. These proteins are involved in TonB-dependent active uptake of selective substrates.
Pssm-ID: 429580 [Multi-domain] Cd Length: 51 Bit Score: 35.95 E-value: 3.90e-03
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 987818758 68 QVFFDSQRFAGLGSAAVH-GEYLLADGLSQMLQGSPVEYRFSGK 110
Cdd:pfam07660 1 SILYDSDLVDGKQSVSLNvGNVTLEEALDQLLAGTGLSYEIGGN 44
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
126-883 |
0e+00 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 683.35 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 126 MSPSVISAARPDDWVYQTPHSVSVIGREQIERNPPRHAADMLEETPGVYSSVSQQDPGLSVNIRGIQDYgRVNMSVDGMR 205
Cdd:TIGR01785 1 LDTVTVTATRTRQVLSEAPASVSVISGEQIESKQANNLADALNTVPGVDVTGGGRPPGQSINIRGLQDN-RVLVVVDGAR 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 206 QNYQQSGHQqrNGTLYVDPELLSEVVIDKGASSAMGGAGVIGGIANFRTLEARDLVRPGKQVGGRVRLTSGLGGDANGTH 285
Cdd:TIGR01785 80 QNYQRGGAH--NGSLFVDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDAADLLRPGQLFGGLAKLSYGSNNNSFGGS 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 286 FIGSAAFaigTEVWDMLVAASERHLGDYDPGTKgsigelrtgawfnpeagqrvkhSPVAYSGYVMRSRLAKLGVALPQDQ 365
Cdd:TIGR01785 158 VAVAGRL---DDNLDALVAATYRDGGNYRNGNK----------------------EEATNSAYVQKNLLAKLGWQLDDAQ 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 366 RLQFSYLTTQVSYDDA--NMLNTEN-QALWEKLGSSDVRAQNFAIDYGYAP-DNPLVDFKAKLYYVDNRNRQQTLQRGit 441
Cdd:TIGR01785 213 RLEFSYFTTEGSLDEAqnSGPGTEYvLGSSSTLLASSTRDRSATLTYNWTPeDNPWLDATASLYYNRTENDNDRSARG-- 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 442 PGYSITYQTDTYGAQAQNTSTFALDDLSTLraNYGLEFFYDKVRPDSSQPRASTSAVGFPaaegmtPKGDRALGSLFARL 521
Cdd:TIGR01785 291 VGREEGYQYTTYGATLQNTSRFDVASWSTL--TYGVDWMKDKRRTESFDPNSVTTIVPNP------PSAKEYFFGLFLQD 362
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 522 DYD-YDDWLNLNAGLRYDRYRLRGDTGFNartfilgttrqtdmplQYAVDREEGRFSPTFGLSVKPgVDWLQLFATYGKG 600
Cdd:TIGR01785 363 NIPlLDDRLTLSAGLRYDHYKLSPKTTAD----------------TEAVDRSYSRWSPSLGLSYKP-VDWLTLYASYSQG 425
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 601 WRPPAVTESLITGRPHG-GGAENMYPNPFLSPERSKAWEVGFNVLKENLWFSDDRLGLKVAYFDTRVDDFIFMGMGMQPP 679
Cdd:TIGR01785 426 FRAPSIDELYGTGDHPGtPGGYTFAPNPNLKPETSKTWELGANLSFDNLLLDNDQLQFKVAYFYNDVKDFIDLTIGVTDN 505
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 680 GYgmAGIGN-SAYVnNLDSTRFRGVEYQLDYDAGLAYGQLSYTHMIGSNdfCSKTAWLGGvtqtvkgsgrrppvidmrpd 758
Cdd:TIGR01785 506 VT--AGMNNiTQYV-NIDGARIRGIEASASYDAGLWATGLSYGYTIGKD--QNTNQWLSN-------------------- 560
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 759 eqanaathcsavlgsaehMPMDRGSLTLGMRFFDRRLDVGARARYSEGYSVAGGaTVSQAGVYPADWKEYTVYDLYGSYR 838
Cdd:TIGR01785 561 ------------------IPPLKLVVTVGYRFPDRRLDLGAKAAYYERQSESPT-TEDVAANGLLTTPGYTVVDLYATYQ 621
|
730 740 750 760
....*....|....*....|....*....|....*....|....*..
gi 987818758 839 VSD--ELTLRLAMENVTDRAYLVPLGDVLAFTlgrGRTLQGTLEYQF 883
Cdd:TIGR01785 622 PNAvkGLTVRFGVNNLTDRKYTPAQSVPGAGP---GRNFKGSVKYQF 665
|
|
| TonB-hemlactrns |
TIGR01786 |
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model ... |
111-883 |
0e+00 |
|
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273808 [Multi-domain] Cd Length: 715 Bit Score: 603.64 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 111 DQLSLIRVSQDDlvqmspsvisAARPDdwVYQTPHSVSVIGREQIERNPPRHAADMLEETPGVYSSVSQQDPGLSVNIRG 190
Cdd:TIGR01786 1 DTITVTATRTAD----------PQRRD--LSVTPASVSVISREQLKSQQVRNLRDLLRYEPGVSVVEGGRGGSQGINIRG 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 191 IQDYgRVNMSVDGMRQNYQQSGHQQRN-GTLYVDPELLSEVVIDKGASSAMGGAGVIGGIANFRTLEARDLVRPGKQVGG 269
Cdd:TIGR01786 69 LDKN-RVAVLVDGIRQNTSYGGQGSTFyAINSIDPELIKSIEIVKGASSSLYGSGALGGVVAFRTKDAADLLKPGKDLGG 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 270 RVRLTSGLGGDangtHFIGSAAFAIGTEVWDMLVAASERHLGDYDPGTKGSIGELrtgawfnpeagqrVKHSPVAYSGYV 349
Cdd:TIGR01786 148 LSKLGYSSANN----RFTQSVAAAGRNDDVDALVQATYRRGHELKNGNKANIGNE-------------SKRSKPNPSDYK 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 350 MRSRLAKLGVALPQDQRLQFSYLTTQVSYDDANMLNTEN---------QALWEKLGSSDVRAQNFAIDYGYAPDNPLVDF 420
Cdd:TIGR01786 211 SQSFLAKLGWQLNDAHRLGLSLEYTQTDYDEPEMTNTSYltkplgaplLSSTVVLGDSKTRDRRTGLDYELNPDNSWLDT 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 421 KA---KLYYVDNRNRQQTLQRGITPGYSITY-QTDTYGAQAQNTSTFALDDLS--TLRANYGLEFFYDKVRPDSSQPRAS 494
Cdd:TIGR01786 291 VKlalDKQYIQLYNYLNATSASDYPGVDKNGrYKDKYDYYTLGFDTNNKIEFSvhSLSLTYGLDRFKDKVSTGDSRRNLP 370
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 495 TSAVGFPAAEGMTPKGDRALGSLFARLDYDYDDWLNLNAGLRYDRYRLRGDTgfnartfilgttrqTDMPLQYAVDREEG 574
Cdd:TIGR01786 371 TAAYNLYGYEGENRPVKGSNFGLFLQDNIKLGDWLSLSAGLRYDHYKTDPKA--------------DESKDYGAISKTYS 436
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 575 RFSPTFGLSVKPgVDWLQLFATYGKGWRPPAVTESLITGRPHGGGAENMYPNPFLSPERSKAWEVGFNvlkenlwFSDDR 654
Cdd:TIGR01786 437 RWSPSLGLTYKP-TPWLTLYYSYSQGFRAPSFDELYGTGAHPGGGPYTFLPNPNLKPETSKNWEIGIN-------LHFDQ 508
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 655 LGLKVAYFDTRVDDFIFMGMGMQPPGYgMAGIGNSAYVN--NLDSTRFRGVEYQLDYDAGLAYGQlsythmigsndfcsk 732
Cdd:TIGR01786 509 LDFKVSYFRNDYKDFIDLGIGVTAKGN-MAQVGSNTITNyvNIDNARIRGIELSGRYDLGSFFSG--------------- 572
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 733 tawLGGVTQTVKGSGRRPPVIDMRPdeQANAATHCSAVLGSAEHMPMDRGSLTLGMRFFDRRLDVGARARYSEgysvagg 812
Cdd:TIGR01786 573 ---PDGWTTTLKYGYTKGKDSDTNP--WLNAITPLKVVLGLGYDHPDEKWGVGLTLTFSGAKDAVDAYATYYE------- 640
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 987818758 813 aTVSQAGVYPADWKEYTVYDLYGSYRVSDELTLRLAMENVTDRAYLVPLGDVLAFTLGR-----GRTLQGTLEYQF 883
Cdd:TIGR01786 641 -NGEAAKAGPLRTPSYTVVDLYGYYKPNKNLTLRFGVYNLLDRKYTTWESARQAGPLATgytapGRNYKASVEYKF 715
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
130-863 |
1.13e-72 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 251.67 E-value: 1.13e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 130 VISAARPDDWVYQTPHSVSVIGREQIERNPPRHAADMLEETPGVYSSvSQQDPGLSVNIRGIQDYG-RVNMSVDGMRQNY 208
Cdd:COG1629 5 VVTATRTDESLQDVPGSVSVISREQLEDQPATDLGDLLRRVPGVSVT-SAGGGAGQISIRGFGGGGnRVLVLVDGVPLND 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 209 QQSGHQQRNgtlYVDPELLSEVVIDKGASSAMGGAGVIGGIANFRTLeardlvRPGKQVGGRVRLTSGLGGDANgthfiG 288
Cdd:COG1629 84 PSGGDGGLS---YIDPEDIERVEVLRGPSSALYGSGALGGVINIVTK------KPKDGKGGEVSASYGSYGTYR-----A 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 289 SAAFAIGTEVWDMLVAASERHLGDYdpgtkgsigelrtgawfnpeagqrvkhspVAYSGYVMRSRLAKLGVALPQDQRLQ 368
Cdd:COG1629 150 SLSLSGGNGKLAYRLSASYRDSDGY-----------------------------RDNSDSDRYNLRAKLGYQLGDDTRLT 200
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 369 FSYLTTQVSYDDANMLNTENQALWE---------KLGSSDVRAQNFAIDYGYAPDNPLVDFKAKLYYVDNRNR----QQT 435
Cdd:COG1629 201 LSASYSDSDQDSPGYLTLAALRPRGamddgtnpySNDTDDNTRDRYSLSLEYEHLGDGLKLSASAYYRYDDTDldsdFTP 280
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 436 LQRGITPGYSITYQTDTYGAQAQNTSTFALDDLSTLRanYGLEFFYDKVRpDSSQPRASTSAVGFPAAEGMTPKGDRALG 515
Cdd:COG1629 281 TPADGGTLEQTDFDNRTYGLELRLTYDLGFGGKHTLL--VGLDYQRQDLD-GSGYPLDLGSGSLPTLTSGADDDGTTTSL 357
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 516 SLFARLDYDYDDWLNLNAGLRYDRYRLRGDTGFNARTFILGttrqtdmplqyavDREEGRFSPTFGLSVKPgVDWLQLFA 595
Cdd:COG1629 358 ALYAQDTYKLTDKLTLTAGLRYDYVSYDVDDTVTGTDSASG-------------SRSYSAFSPSLGLTYQL-SPNLSLYA 423
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 596 TYGKGWRPPAVTESLITgrphgGGAENMYPNPFLSPERSKAWEVGFnvlkeNLWFSDDRLGLKVAYFDTRVDDFIFmgmg 675
Cdd:COG1629 424 SYSRGFRAPTFGELYAN-----GTDPYSVGNPDLKPETSTNYELGL-----RYRLLDGRLSLSLALFYSDVDNEIL---- 489
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 676 mqpPGYGMAGIGNSAYVNNLDSTRFRGVEYQLDYDAGLA-YGQLSYTHMIGSNDfcsktawlGGVTQTVKGSGRRPPvid 754
Cdd:COG1629 490 ---SVPLPNDSGFSTYYTNAGKARSYGVELELSYQLTPGlSLNASYSYTDAKFD--------DDTDGSADLDGNRLP--- 555
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 755 mrpdeqanaathcsavlgsaeHMPMDRGSLTLGMRFFDrRLDVGARARYSEGYSVAGGATVSQAGvypadwkEYTVYDLY 834
Cdd:COG1629 556 ---------------------GVPPLTANLGLTYEFPG-GWSLGLGVRYVGDRYLDDANTQGAPG-------GYTLVDLG 606
|
730 740
....*....|....*....|....*....
gi 987818758 835 GSYRVSDELTLRLAMENVTDRAYLVPLGD 863
Cdd:COG1629 607 AGYRFGDNLTLSLGVDNLFDKKYATSLSV 635
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
146-883 |
4.98e-59 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 213.08 E-value: 4.98e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 146 SVSVIGREQIERNPPRHAADMLEETPGVYSSVSQQDPGLSVNIRGIQDYgRVNMSVDGMRQNyqQSGHQQRNGTLYVDPE 225
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRRIPGVSVTRGGGGGGSTISIRGFGPD-RTLVLVDGLPLA--SSNYGRGVDLNTIPPE 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 226 LLSEVVIDKGASSAMGGAGVIGGIANFRTleardlVRPGKQVGGRVRLTSG--LGGDANGTHFIGSAAFAiGTEVWDMLV 303
Cdd:cd01347 78 LIERVEVLKGPSSALYGSGAIGGVVNIIT------KRPTDEFGGSVTAGYGsdNSGSSGGGGFDVSGALA-DDGAFGARL 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 304 AASERHLGDYDPGTkgsigelrtgawfnpeagqrvkhSPVAYSGYVMRSRLAKLGVALPQDQRLQFSYLTTQVSYDDANM 383
Cdd:cd01347 151 YGAYRDGDGTIDGD-----------------------GQADDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGG 207
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 384 LN-------------TENQALWEKLGSSDVRAQNFAIDYGYAPDNPLVDFKAKLYYVDNRNRQQTL----------QRGI 440
Cdd:cd01347 208 TLpangtgsslgggpSSNTNGDRDWDYRDRYRKRASLGLEHDLNDTGWTLRANLSYSYTDNDGDPLilnggnnaagGDLG 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 441 TPGYSITYQTDTYGAQAQNTSTFALDDLStLRANYGLEFFYDKVRPDSSqprastsavgfpaaegmtpkgdralgSLFAR 520
Cdd:cd01347 288 RSGYSSERDTTQLGFDAGLNAPFGTGPVA-HTLTLGVEYRREELDEKQT--------------------------ALYAQ 340
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 521 LDYDYDDWLNLNAGLRYDRYRLRGDTGFNARTfilgttrqtdmplqyAVDREEGRFSPTFGLSVKPGvDWLQLFATYGKG 600
Cdd:cd01347 341 DTIELTDDLTLTLGLRYDHYDQDSKDTIAGGT---------------TAKKSYSHWSPSLGLVYKLT-DGLSLYASYSQG 404
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 601 WRPPAVTESLITGRPHGGGAenmYPNPFLSPERSKAWEVGFNvlkenlWFSDDRLGLKVAYFDTRVDDFIFmgmgmqpPG 680
Cdd:cd01347 405 FRAPSLGELYGGGSHGGTAA---VGNPNLKPEKSKQYELGLK------YDPGDGLTLSAALFRIDIKNEIV-------ST 468
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 681 YGMAGIGNSAYVNNLDSTRFRGVE----YQLDYDAGLaYGQLSYTHMIGSNDFCSKTawlggvtqtvkgsGRRPPVIdmr 756
Cdd:cd01347 469 PTNTGLGLVTVYVNGGKARIRGVEleasYDLTDGLGL-TGSYTYTDTEVKRTDGATT-------------GNRLPGI--- 531
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 757 pdeqanaathcsavlgsaehmPMDRGSLTLGMRFFDRRLDVGARARYSEGYSVaggatVSQAGVYPADWKEYTVYDLYGS 836
Cdd:cd01347 532 ---------------------PKHTANLGLDYELPDEGLTAGGGVRYRGKQYA-----DTANGNNTVKVPGYTLVDLSAS 585
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|
gi 987818758 837 YRVSDELTLRLAMENVTDRAY---LVPLGDVLAFTLGRGRTLQGTLEYQF 883
Cdd:cd01347 586 YQFTKNLTLRLGVNNLFDKDYytsLSVRGSGLYGYYGPGRTYYLSVSYKF 635
|
|
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
120-846 |
1.73e-56 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 205.48 E-value: 1.73e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 120 QDDLVQMSPSVISAARPDDWVYQTPHSVSVIGREQIERNPPRHAADMLEETPGVYSSVSQQDPGLS-VNIRGIqDYGRVN 198
Cdd:COG4771 21 AEDATELEEVVVTATRTEQSLSDAPASVSVITAEEIEKLGATDLADALRLLPGVSVTRSGGRGGSSgISIRGL-GGDRVL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 199 MSVDGMRQNYQQSGHqqRNGTLYVDPELLSEVVIDKGASSAMGGAGVIGGIANFRTleardlVRPGKQVGGRVRLTSGLG 278
Cdd:COG4771 100 VLIDGVPVNNPALGG--GGDLSYIPPDDIERIEVIRGPASALYGSDAIGGVINIIT------KKPTDELEGSVSLGYGSN 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 279 GDANGThfiGSAAFAIGTEVWDMLVAASERHlgdydpgtkgsigelrTGAWFNPEAGQRvkhspVAYSGYVMRSRLAKLG 358
Cdd:COG4771 172 GNGTYS---GSLSLGGPGDKLSFLLSGSYRD----------------RDGYLDYRNGGF-----VGNSGYERYNLNAKLG 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 359 VALPQDQRLQFSYLTTQVSYDDANMLNTENQALWEKLGSSD--VRAQNFAIDYGYAPDNplvDFKAKLYYVDNRNRQQTL 436
Cdd:COG4771 228 YRLSDNHRLSLSGGYSRQDRDGGPPTLGDTEISSDNAGDRDttTDRGNYSLRYNGDLGD---NLDLSLYYSRTDRDSTNG 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 437 QRGITPGYSITYQTDTYGAQAQNTSTFAlddlSTLRANYGLEFFYDKVRPDSSQPrastsavgfpaaegmTPKGDRALGS 516
Cdd:COG4771 305 SLGGSTGSFSDSDDTTYGLELDLTYPLG----GNHTLTLGAEYRYDDLDSSSFLG---------------GADASRDTYG 365
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 517 LFARLDYDYDDWLNLNAGLRYDRYRLRGDTGFNArtfilgttrqtdmplqyavdreegrFSPTFGLSVKPGvDWLQLFAT 596
Cdd:COG4771 366 LFAQDEWKLTDKLTLTAGLRYDYYSTFGASNYTA-------------------------FSPRLGLRYDLS-DNLTLRAS 419
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 597 YGKGWRPPAVTESLITGRPHGGGaeNMYPNPFLSPERSKAWEVGFnvlkeNLWFSDDRLGLKVAYFDTRVDDFIFmgmgm 676
Cdd:COG4771 420 YGRGFRAPSLAELYGSGTGTPGR--YVLGNPDLKPETSDNYELGL-----EYRLGNGGLSLSLTGFYTDIKDLIV----- 487
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 677 qpPGYGMAGIGNSAYVNNLDSTRFRGVEYQLDYDAGLA-YGQLSYTHMIGSNDFCSKTAWLGGVtqtvkgsgrrppvidm 755
Cdd:COG4771 488 --LVPVGPGPGDVLQYENVGKARTYGLELELKYRLGKGlTLTASYTYLDSKIDDGDTGEPLPNV---------------- 549
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 756 rpdeqanaathcsavlgsaehmPMDRGSLTLGMRFFDRRLDVGARARYSEGYSVAGGATVSQAGVYpadwkeYTVYDLYG 835
Cdd:COG4771 550 ----------------------PPHKANLGLDYRLPKWWLLLLLTRYYGGRYVTPPSGRLEGYTPG------YTLLDLRA 601
|
730
....*....|.
gi 987818758 836 SYRVSDELTLR 846
Cdd:COG4771 602 SYKLTKNLTLS 612
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
370-882 |
6.04e-41 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 157.62 E-value: 6.04e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 370 SYLTTQVSYDDANMLNTENQALWEKLGSSDVRAQNFAIDYGYAPDNPL---VDFKAKLYYVDNRNRQQTLQRGITPGYSI 446
Cdd:pfam00593 28 LDLGLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLswlSTLRLGLRYSSLDGDYTSNSSGLSGAGDY 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 447 TYQTDTYGAQAQNTSTFALDDLsTLRANYGLEFFYDKVRPDSSQPRASTSAVGFPAAEGMTPKGDRALGSLFARLDYDYD 526
Cdd:pfam00593 108 LSDDRLYGLYGLDGDLELSLDL-SHDLLLGVELRTAGLDYRRLDDDAYDPYDPANPSSSSYSDTTTDSYGLYLQDNIKLT 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 527 DWLNLNAGLRYDRYRLRGDTGFNARTfilgttrqtdmplqyAVDREEGRFSPTFGLSVKPgVDWLQLFATYGKGWRPPAV 606
Cdd:pfam00593 187 DRLTLTLGLRYDHYSTDGDDGNGGGD---------------NFSRSYSAFSPRLGLVYKP-TDNLSLYASYSRGFRAPSL 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 607 TEsLITGRPHGGGAENMYPNPFLSPERSKAWEVGFNvlkenlwFSDDRLGLKVAYFDTRVDDFIFMGMGMQPPGygmagi 686
Cdd:pfam00593 251 GE-LYGSGSGGGGGAVAGGNPDLKPETSDNYELGLK-------YDDGRLSLSLALFYIDIKNLITSDPDGPGLG------ 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 687 GNSAYVNNLDSTRFRGVEYQLDYD---AGLAYGQLSYTHmigsndfcsktawlGGVTQTVKGSGRRPPVIdmrpdeqana 763
Cdd:pfam00593 317 GTVYTYTNVGKARIRGVELELSGRlwgLGLSGGGYTYTD--------------ADDDADADDTGNPLPNV---------- 372
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 764 athcsavlgsaehmPMDRGSLTLGMRFFDRRLDVGARARYsegysVAGGATVSQAGVYPADWKEYTVYDLYGSYRVSDEL 843
Cdd:pfam00593 373 --------------PRHTANLGLTYDFPLGGWGARLGARY-----VGSGERRYGDAANTFKTPGYTLVDLSAGYRLNKNL 433
|
490 500 510 520
....*....|....*....|....*....|....*....|..
gi 987818758 844 TLRLAMENVTDRA---YLVPLGDVLAFTLGRGRTLQGTLEYQ 882
Cdd:pfam00593 434 TLRLGVNNLFDKYykrYYSSGGGNLGGYPGPGRTFYLGLSYK 475
|
|
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
143-883 |
8.94e-34 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 138.47 E-value: 8.94e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 143 TPHSVSVIGREQIERNPPRHAADMLEETPGVYSSVSQQDPGLSVNIRGIQdyGRVNMSVDGMRQNYQQsghqqrngtlYV 222
Cdd:COG4774 9 TPQSVTVVTRELIEDQGATSLADALRNVPGVTFGAGEGGNGDSFSIRGFS--ASGDIYVDGLRDPGQY----------RR 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 223 DPELLSEVVIDKGASSAMGGAGVIGGIANFRTleardlVRPGKQVGGRVRLTSG------LGGDANGThFIGSAAFAI-- 294
Cdd:COG4774 77 DTFNLERVEVLKGPASVLYGRGSPGGVINLVT------KRPTDEPFTEVTLTYGsdgqrrATLDVNGP-LGDDLAYRLng 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 295 -----GTEVWDM-----LVAASerhlGDYDPGTkgsigelRTGAWFNpeaGQRVKHSPVAYSGYVMRSRLAKLGV----- 359
Cdd:COG4774 150 myrdsDSYRDGVdndrwGIAPS----LTWRLGD-------RTRLTLD---YEYQDDDRTPDYGVPAVANGRPVDVdrstf 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 360 -ALPQD-QRLQFSYLTTQVSYDDANMLNTENQAlweklgssdvRAQNFAIDYGYApdnplvdfkaklyYVDNRNRQQTLQ 437
Cdd:COG4774 216 yGQPDDySDSETDSATLRLEHDFNDNWTLRNAL----------RYSDYDRDYRNT-------------YPTGGNATGTVT 272
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 438 RGitpGYSITYQTDTYGAQAQNTSTFALDDLStLRANYGLEFFYDKVRPDSSQPRASTSA------VGFPAAEGMTPKGD 511
Cdd:COG4774 273 RS---AYRRDQDNDTLSNQTDLTGKFDTGGVK-HTLLAGVEYSREDSDNARYSGGGTAPTvnlynpVYGAPVTGPTLGGA 348
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 512 RALG-----SLFARLDYDYDDWLNLNAGLRYDRYRLRGDTGFNARTfilgTTRQTDmplqyavdreeGRFSPTFGLSVKP 586
Cdd:COG4774 349 DNDSrtdttGLYLQDTISLTDRWSLLAGLRYDRFDTDYTDRTTGAT----TSSYDD-----------SAFSPRAGLVYKP 413
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 587 gVDWLQLFATYGKGWRPPAVTESLITGrphgggaenmypNPFLSPERSKAWEVGFnvlKENLWfsDDRLGLKVAYFDTRV 666
Cdd:COG4774 414 -TPNLSLYASYSTSFNPGGGAPSLSNA------------GQALDPEKSRQYEVGV---KWDLL--DGRLSLTAALFRIEK 475
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 667 DDFIfmgmgmqppgygMAGIGNSAYVNNLDSTRFRGVEyqLDydaglAYGQLSythmigsndfcskTAW--LGGVTqtvk 744
Cdd:COG4774 476 TNVR------------TTDPANPGVYVQTGEQRSRGVE--LE-----ATGELT-------------PGWsvLAGYT---- 519
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 745 gsgrrppVIDMRPDEQANAATHCSAVLGSAEHMpmdrGSLTLGMRFFDRRLDVGARARYSEGYSVAGGATVSqagvYPAd 824
Cdd:COG4774 520 -------YLDAEITKSANAANVGNRLPNVPRHS----ASLWTTYDLPLPGLTLGGGVRYVGSRYADAANTVK----LPS- 583
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*....
gi 987818758 825 wkeYTVYDLYGSYRVSDELTLRLAMENVTDRAYLVPLGDVLAFTLGRGRTLQGTLEYQF 883
Cdd:COG4774 584 ---YTRFDAGASYRLNKNLTLRLNVNNLTDKRYYASAYGSGYVTPGAPRTVLLSASYRF 639
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
112-883 |
9.63e-31 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 129.28 E-value: 9.63e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 112 QLSLIRVSQDDLVQMSPSVISAARPD-DWVYQTPHSVSVIGREQIERNPPRHAADMLEETPGVYsSVSQQDPGLSVNI-- 188
Cdd:COG4772 9 LLLAAAAAAEAATTLETVVVTGSRAAeARLKDVPGSVSVVDREELENQAATSLREVLRRVPGVN-VQEEDGFGLRPNIgi 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 189 RG--IQDYGRVNMSVDGMRQNYQQSGhqqrNGTLYVDPELLS----EVVidKGASSAMGGAGVIGGIANFRTLEARDlvr 262
Cdd:COG4772 88 RGlgPRRSRGITLLEDGIPIAPAPYG----DPAAYYFPDLERmeriEVL--RGAAALRYGPQTVGGAINFVTRTIPT--- 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 263 pgkQVGGRVRLTSGLGGDANGTHFIGsaafaiGT-EVWDMLVAASERHLGDYDPGTKGSIGELrtgawfnpeagqrvkhs 341
Cdd:COG4772 159 ---AFGGELRVTGGSFGYRRTHASVG------GTvGNFGYLVEYSRKRGDGFRDNSGFDINDF----------------- 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 342 pvaysgyvmrsrLAKLGVALPQDQRLQFSYlttQVSYDDANMLNTENQALWE--------KLGSSDVRAQNFAIDYGYAP 413
Cdd:COG4772 213 ------------NAKLGYRLSDRQELTLKF---QYYDEDANTPGGLTDAQFDadprqsyrPADQFDTRRTQLSLRYEHQL 277
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 414 DnPLVDFKAKLYYVD-NRNRQQTLQRGITPGYSITYQT-----DTYGAQAQNTSTFALDDL-STLRAnyGLEFFYDKVRp 486
Cdd:COG4772 278 S-DNTTLTTTAYYNDfSRNWYIRQNTADPNTPGLGLRGnprgyRSYGIEPRLTHRFELGGVpHTLEV--GLRYHREEED- 353
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 487 dssqpRASTSAVGFPAAEGMTPKGDR-----ALgSLFARLDYDYDDWLNLNAGLRYDRYRLRGDTGFNARTFIlGTTRQT 561
Cdd:COG4772 354 -----RKQYVNTYGQGRSGAGLRRDRrfsadAL-AAYAQNRFELTGRLTLTPGLRYEHIRRDRTDRYSTRTGG-DDSGSN 426
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 562 DmplqYAVdreegrFSPTFGLSVKPgVDWLQLFATYGKGWRPPAVTESLITGRphgggaenmyPNPFLSPERSKAWEVGF 641
Cdd:COG4772 427 S----YSE------FLPGLGLLYQL-TDNLQLYANVSRGFEPPTFGDLAYGNG----------GNPDLKPEKSWNYELGT 485
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 642 NvlkenlWFSDDRLGLKVAYFDTRVDDFIfmgmgmqppGYGMAGIGNSAYVNNLDSTRFRGVEYQLDYDAGLAYGQ---- 717
Cdd:COG4772 486 R------GRIGNGLSAEVALFYIDYDNEL---------GSCSAAGGDRSTFTNAGETRHQGLELALDYDLLKGGGLglpl 550
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 718 -LSYTHmigsNDFcSKTAWLGGVTqtvkgSGRRPPvidmrpdeqanaathcsavlGSAEHMpmdrgsLTLGMRFFDRRLD 796
Cdd:COG4772 551 fAAYTY----TDA-EFTSDFGPVF-----AGNRLP--------------------YVPRHQ------LTAGLGYEHGGWT 594
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 797 VGARARY-SEGYSVAGGATVS-QAGVYPAdwkeYTVYDLYGSYRVSDELTLRLAMENVTDRAYLVPLGDVLAFTL--GRG 872
Cdd:COG4772 595 ANLNGRYvSEQFTDAANTVADgSFGKIPS----YTVLDLSASYDFGKNLSLFAGVNNLFDKRYIASRAPNYAAGIrpGPP 670
|
810
....*....|.
gi 987818758 873 RTLQGTLEYQF 883
Cdd:COG4772 671 RTVYAGLRLKF 681
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
94-883 |
8.80e-27 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 116.92 E-value: 8.80e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 94 LSQMLQGSPVEYRFSGKdQLSLIRVSQDDLVQMSPSVISAARPDDWVYQ----------------TPHSVSVIGREQIER 157
Cdd:COG4773 1 AAALLAGSGLAAAAAGA-LAQAAAAAAAEATTLPEVTVTGTAEGTGGYTakssstatkldtplreTPQSVSVVTRQLIED 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 158 NPPRHAADMLEETPGVYSSVSQQDPGLSVNIRGIQDYgrvNMSVDGMRQNYqqsghqqrNGTLYVDPELLS--EVVidKG 235
Cdd:COG4773 80 QGATTLDDALRNVPGVTVSSYDGGGRDSFSIRGFSID---NYLRDGLPLGG--------FGGGQPDTANLErvEVL--KG 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 236 ASSAMGGAGVIGGIANfrtleardLV--RPGKQVGGRVRLTSG----------LGG--DANGTH---FIGSA----AFAI 294
Cdd:COG4773 147 PAGLLYGAGSPGGLVN--------LVtkRPTAEPQGEVSLSAGswdtyratadVGGplNEDGTLryrLNAAYedgdSFRD 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 295 GTEVWDMLVAASerhlGDYDPGTKGSigeLRTGAwfnpeagQRVKHSPVAYSGYvmrsrlaklgvaLPQDqrlqfsylTT 374
Cdd:COG4773 219 GVDNRRTLIAPS----LDWDLTDDTT---LTLGA-------EYQDDDSTGDRGF------------LPLD--------GT 264
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 375 QVSYDDANMLNtenqalwEKLGSSDVRAQNFAIDYGYAPDNPLVdFKAKLYYVDNRNRQQTLQRGITP----------GY 444
Cdd:COG4773 265 LLDLPRSTNLG-------EPWDYYDTETTTLFAELEHRFNDDWS-LRANARYSDSDRDGRSAYAYGAPdaatgtltryAS 336
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 445 SITYQTDTYGAQAQNTSTFALDDLS-TLRAnyGLEFFYDKVRPDSSQPRA------STSAVGFPAAEGMTPKGDRALGSL 517
Cdd:COG4773 337 ARDGDSRSDSLDANLNGKFETGGLEhTLLV--GADYSRYDSDSDSATAGTiniynpVYGNLPEPDFDASDTDTTTRQTGL 414
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 518 FARLDYDYDDWLNLNAGLRYDRYRLRGDTGFNARTfilgttrqtdmplqyaVDREEGRFSPTFGLSVKPgVDWLQLFATY 597
Cdd:COG4773 415 YAQDQISLTDRLSLLLGGRYDWYETDSTNRLGGST----------------TSYDDSAFTPRAGLVYDL-TPGLSLYASY 477
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 598 GKGWRPpaVTESLITGRPhgggaenmypnpfLSPERSKAWEVGfnvLKENLWfsDDRLGLKVAYFDTRVDDFIfmgmgmq 677
Cdd:COG4773 478 SESFEP--QSGADNNGNP-------------LDPETGKQYEAG---VKGELF--DGRLNATLAVFDITQKNVA------- 530
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 678 ppgygMAGIGNSAYVNNLDSTRFRGVEYQLdydAGLAYGQLSythmigsndfcsktaWLGGVTQTvkgsgrrppviDMRP 757
Cdd:COG4773 531 -----TTDPDNPNFYVQVGEVRSRGVELEL---SGELTPGLN---------------LIAGYTYT-----------DAKI 576
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 758 DEQANAATHcSAVLGSAEHMpmdrGSLTLGMRF---FDRRLDVGARARYSEGYSVAGGATVSQAGvypadwkeYTVYDLY 834
Cdd:COG4773 577 TKDADALEG-KRLTNVPRHT----ASLWTTYRFpsgALKGLGLGGGVRYVGERYGDAANTFTLPS--------YTLVDAG 643
|
810 820 830 840
....*....|....*....|....*....|....*....|....*....
gi 987818758 835 GSYRVSDELTLRLAMENVTDRAYLVPLGDVLAFTLGRGRTLQGTLEYQF 883
Cdd:COG4773 644 ARYDLGKNWTLQLNVNNLFDKKYYASSGSRGYVYYGAPRNVRLSLSYKF 692
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
143-883 |
6.47e-22 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 101.34 E-value: 6.47e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 143 TPHSVSVIGREQIERNPPRHAADMLEETPGVYSSVSQQD-PGLSVNIRGI-QDYGRVNMSVDGMRQNYqqsghqqRNGTL 220
Cdd:TIGR01783 2 IPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGGSGGTtQFGNITIRGFgLEVDIDNVYLDGVPLLS-------RGNLA 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 221 YVDPELLSEVVIDKGASSAMGGAGVIGGIANFRTLEA--------------RDLVRPGKQVGGRVRLTSGLGGDANGTH- 285
Cdd:TIGR01783 75 IVDPAMVERVEVLRGPASLLYGGSAPGGVINIVTKRPqdepkgsvtfgagtRSGYRTAFDLGGPLGADGTFRGRLNGARq 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 286 -------FIGSAAFAIGTEV-WDMLVAASERHLGDYDPGTKGSIGelrtgAWFNPEAGQRVKHSPV-AYSGYVMRSRLAK 356
Cdd:TIGR01783 155 dgdsfydGAGEETRLGATATdWQLDDRTLLRLGAYYQKERDRGGY-----GGLPASGGTSGRDLSSdRYLGTSSNRNYDD 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 357 LGValpQDQRLQFSYLTTQVSYDDANMLNTENQALWEKLGSSDVRAQNFAIDYGYAPDNPLVDFKAklyyVDNRNRQQTL 436
Cdd:TIGR01783 230 REY---LSYGLSLEYQFNDVWTGKQNLRYSYFDTDSNQVQASGYSSDGGLFGRSLTVVNVKQDRVQ----IDAGLDGEFE 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 437 QRGITP---GYSITYQTDTYGaqaqNTSTFALDDLSTLRANYGlefFYDKVRPDSSQPRASTSAVgfpaaegmtpkgdRA 513
Cdd:TIGR01783 303 TGPIEHdllLGVSYGQRTTNR----FNNTGYPSDNIYSLTATS---SARTDIGDSPKDRALSSTT-------------KA 362
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 514 LGSLFARLDYDYDDWLnLNAGLRYDRYRLRGDTGfnartfILGTTRqtdmplqyavDREEGRFSPTFGLSVKPGVDWlQL 593
Cdd:TIGR01783 363 LNGVALQRILLADKWT-LTLGGRYDSVDVKSNNG------VAGSTG----------KRDDSQFTPSLGVAYKPTDDW-SL 424
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 594 FATYGKGWRPPavtesLITGRPHGGGAENmypnpfLSPERSKAWEVGFNVLKenlwfsDDRLGLKVAYFDTRVDDFIfmg 673
Cdd:TIGR01783 425 YASYAESFKPG-----GYYPKGAGNSGDI------LEPEKGKNYELGVRYDL------GDSLLATAALFRITKDNQL--- 484
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 674 mgmqppgygMAGIGNSAYVNNLDSTRFRGVEYQLDYDAGLaygqlsythmigsndfcsKTAWLGGVTqtvkgsgrrppVI 753
Cdd:TIGR01783 485 ---------VQDPVNGTFSVNAGKTRNRGVELEARGYLTP------------------GLSLSAGYT-----------YT 526
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 754 DMRPDEQANAATHCSAVLGSAEHMpmdrGSLTLGMRFF--DRRLDVGARARYSEGYSVAGGATVSQAGvypadwkeYTVY 831
Cdd:TIGR01783 527 DAEFTEDTNGDTQGNTVPFVPKHT----ASLWASYAPPvgDNGLTLGGGVQYTGKAYVDGGNTGKVPS--------YTVV 594
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*..
gi 987818758 832 DLYGSYRV--SDELTLRLAMENVTDRAYLVPLGDVLAFT---LGRGRTLQGTLEYQF 883
Cdd:TIGR01783 595 DLSVRYDLtkKKNLTLALNVNNLFDRDYYTSGYRWGPSAyiyPGAPRTVGLSVSYDF 651
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
140-240 |
1.15e-17 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 79.24 E-value: 1.15e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 140 VYQTPHSVSVIGREQIERNPPRHAADMLEETPGVYSSVSQQDPGLSVNIRGIqDYGRVNMSVDGMRQNYQQSGHQQRNgt 219
Cdd:pfam07715 2 LRDTPGSVSVVTAEDIEDQGATNLADALRGVPGVSVSSGGGGGGSSISIRGF-GSNRVLVLVDGVPLNSGGGGSVDLN-- 78
|
90 100
....*....|....*....|.
gi 987818758 220 lYVDPELLSEVVIDKGASSAM 240
Cdd:pfam07715 79 -SIDPEDIERVEVLKGPASAL 98
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
130-320 |
1.09e-12 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 69.52 E-value: 1.09e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 130 VISAARPDDWVYQTPHSVSVIGREQIERNPPRHAADMLEETPGVYSSVSQQDPGL-SVNIRGIqDYGRVNMSVDGMRQNY 208
Cdd:COG4206 2 VVTATRLEQSKSDLTGSVTVIDAEELERSGATSLADALRRVPGVQVSSSGGPGSAaSISIRGL-GSNQTLVLIDGVPLND 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 209 QQSGHqqrNGTLYVDPELLSEVVIDKGASSAMGGAGVIGGIANFRTLeardlvRPGKQVGGRVRLTSGlggdaNGTHFIG 288
Cdd:COG4206 81 PSLGG---VDLSLIPPDDIERIEVLKGAASALYGSDAIGGVINITTK------KGKKGFKGSVSASYG-----SFGTRRL 146
|
170 180 190
....*....|....*....|....*....|..
gi 987818758 289 SAAFAIGTEVWDMLVAASERHLGDYDPGTKGS 320
Cdd:COG4206 147 SASLSGGAGKFSYSLSASYRRSDGYRYNDPDL 178
|
|
| STN |
smart00965 |
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of ... |
67-117 |
4.85e-05 |
|
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of the Secretins of the bacterial type II/III secretory system as well as the TonB-dependent receptor proteins. These proteins are involved in TonB-dependent active uptake of selective substrates.
Pssm-ID: 198033 [Multi-domain] Cd Length: 52 Bit Score: 41.72 E-value: 4.85e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 987818758 67 VQVFFDSQRFAGLGSAAVHGEYLLADGLSQMLQGSPVEYRFSGKDQLSLIR 117
Cdd:smart00965 1 LNFVYDPALVAGRRVSLLLGNVTVEQALDRLLAGTGLTYRRIGGNTIVLSP 51
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
128-855 |
6.39e-05 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 46.80 E-value: 6.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 128 PSVISAARPDDWVYQTPHSVSVIGREQIERNPPRHAADMLEETPGVYSSvSQQDPGLSVNIRGIqDYGRVNMSVDGMRQN 207
Cdd:PRK10064 32 TMVVTASAVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLT-NEGDNRKGVSIRGL-DSSYTLILIDGKRVN 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 208 YQQSGHQQRNGTL-YVDPELLSEVVIDKGASSAMGGAGVIGGIANFRTLEArdlvrpGKQVGGRVRLTSGL-----GGDA 281
Cdd:PRK10064 110 SRNAVFRHNDFDLnWIPVDAIERIEVVRGPMSSLYGSDALGGVVNIITKKI------GQKWHGTVTVDTTIqehrdRGDT 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 282 NGTHFIGSAAFAIGTEVWDMLVAASERHLGDYDPGTKGSIGElrtgawfnpeagqrvkhsPVAYSGYVMRSRLAKLGVAL 361
Cdd:PRK10064 184 YNGQFFTSGPLIDGVLGMKAYGSLAKREKDDPQNSTTTDTGE------------------TPRIEGFTSRDGNVEFAWTP 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 362 PQDQRLQFSYLTTQVSYD----DANMLNTENQALweklgssdvrAQNFAIDYGyapdnplvDFKAKLY--YVDNRNRQQT 435
Cdd:PRK10064 246 NQNHDFTAGYGFDRQDRDsdslDKNRLERQNYSL----------SHNGRWDYG--------NSELKYYgeKVENKNPGNS 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 436 lqrgitpgYSITYQTDTYGAQAqntsTFALDDLSTLrANYGLEFFYDKVrpdsSQPRASTSavgfpaaeGMTPKGDRALG 515
Cdd:PRK10064 308 --------SPITSESNSIDGKY----TLPLTAINQF-LTFGGEWRHDKL----SDAVNLTG--------GTSSKTSASQY 362
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 516 SLFARLDYDYDDWLNLNAGLRYDRYRLRGDtgfnartfilgttrqTDMPLQYAVdreegrFSPTFGLSVKPGvdwlqlfa 595
Cdd:PRK10064 363 ALFVEDEWRIFEPLALTTGVRMDDHETYGD---------------HWSPRAYLV------YNATDTVTVKGG-------- 413
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 596 tYGKGWRPPavteSLITGRPHGG-----GAENMYPNPFLSPERSKAWEVGFNVLKENLWFsdDRLGLKVAYFDTRVDDFI 670
Cdd:PRK10064 414 -WATAFKAP----SLLQLSPDWTsnscrGACKIVGSPDLKPETSESWELGLYYMGEEGWL--EGVESSVTVFRNDVDDRI 486
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 671 FMGMGMQP---PGY----GMAGIGNSAYV-----NNLDSTRFRGVEYQLDYDAGLAYG-QLSYTHMIGSNdfcsktawlg 737
Cdd:PRK10064 487 SISRTSDVnaaPGYqnfvGFETNGRGRRVpvfryYNVNKARIQGVETELKIPFNDEWKlSLNYTYNDGRD---------- 556
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 738 gvtqtVKGSGRRPpvidmrpdeqanaathcsavlgsAEHMPMDRGSLTLGMRFFD-RRLDVGARARYSeGYSVAGGATVS 816
Cdd:PRK10064 557 -----VSNGENKP-----------------------LSDLPFHTANGTLDWKPLAlEDWSFYVSGNYT-GQKRADSATAK 607
|
730 740 750
....*....|....*....|....*....|....*....
gi 987818758 817 QAGvypadwkEYTVYDLYGSYRVSDELTLRLAMENVTDR 855
Cdd:PRK10064 608 TPG-------GYTIWNTGAAWQVTKDVKLRAGVLNLGDK 639
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
119-763 |
3.88e-04 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 44.23 E-value: 3.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 119 SQDDLVQMSpsVISAARPDDWVYQTPHSVSVIGREQIERNPPRHAADMLEETPGVysSVSQQDPGLSVNIRGIQ-DYGRV 197
Cdd:PRK13484 25 SSDKKEDTL--VVTASGFTQQLRNAPASVSVITSEQLQKKPVSDLVDAVKDVEGI--SITGGNEKPDISIRGLSgDYTLI 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 198 nmSVDGMRQNYQQSghqQRNGT-----LYVDP-ELLSEVVIDKGASSAMGGAGVIGGIANFRTLEARDLVRPGK-QVGGR 270
Cdd:PRK13484 101 --LVDGRRQSGRES---RPNGSggfeaGFIPPvEAIERIEVIRGPMSSLYGSDAIGGVINIITKPVNNQTWDGVlGLGGI 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 271 VRLTSGLGGDANGTHFIGSAAF--AIGTEVWDMLVAASErhlgdyDPGTKGsigelrTGAWFNPEAGQRVKHSPVAYSGY 348
Cdd:PRK13484 176 IQEHGKFGNSTTNDFYLSGPLIkdKLGLQLYGGMNYRKE------DSISQG------TPAKDNKNITATLQFTPTESQKF 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 349 VMRSRLAKLGVALPQDQRLqfSYLTTQVSYDDAN-MLNTENQalweklgssdvrAQNFAIDYGYAPDnpLVDFKAKLYYV 427
Cdd:PRK13484 244 VFEYGKNNQVHTLTPGESL--DAWTMRGNLKQPNsKRETHNS------------RSHWVAAWNAQGE--ILHPEIAVYQE 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 428 DNRNRQQTLQRGITPGYSITYQTDTygAQAQNT------STFALDDLSTlranYGLEFFYDKVRPDSSqprastsaVGFP 501
Cdd:PRK13484 308 KVIREVKSGKKDKYNHWDLNYESRK--PEITNTiidakvTAFLPENVLT----IGGQFQHAELRDDSA--------TGKK 373
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 502 AAEGMTPKGDRAlgSLFARLDYDYDDWLNLNAGLRYDRYRLRGdTGFNARTfilgttrqtdmplqYAVdreegrFSPTFG 581
Cdd:PRK13484 374 TTETQSVSIKQK--AVFIENEYAATDSLALTGGLRLDNHEIYG-SYWNPRL--------------YAV------YNLTDN 430
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 582 LSVKPGVdwlqlfatyGKGWRPPAVTE-SLITGRPHGGGAENMYPNPFLSPERSKAWEVGFnvlkenLWFSDDRLGLKVA 660
Cdd:PRK13484 431 LTLKGGI---------AKAFRAPSIREvSPGFGTLTQGGASIMYGNRDLKPETSVTEEIGI------IYSNDSGFSASAT 495
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 661 YFDTRV-DDFIFMGMGMQPPGYGMagigNSAYVNNLDSTRFRGVEYQLD---YDAGLAYGQLSYTHMIGSNDfcsktawl 736
Cdd:PRK13484 496 LFNTDFkNKLTSYDIGTKDPVTGL----NTFIYDNVGEANIRGVELATQipvYDKWHVSANYTFTDSRRKSD-------- 563
|
650 660
....*....|....*....|....*..
gi 987818758 737 ggvTQTVKGSGRRPPVIDMRPDEQANA 763
Cdd:PRK13484 564 ---DESLNGKSLKGEPLERTPRHAANA 587
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
130-710 |
7.50e-04 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 43.22 E-value: 7.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 130 VISAARPDDWVYQTPHSVSVIGREQIERNPPRHAADMLEETPGVYSS--VSQQDpglsVNIRGIQdyGRVNMS-VDGMRQ 206
Cdd:PRK13513 39 VVTASGFQQRIQDAPASISVVTREQLENKAYRDVTDALKDVPGVVVTggGSTSD----ISIRGMA--AKYTLIlVDGKRV 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 207 -------NYQQSGHQQrnGTLyvdPELLS----EVVidKGASSAMGGAGVIGGIANFRTLEArdlvrpGKQVGGRVRLTS 275
Cdd:PRK13513 113 dtrstrpNSDGSGIEQ--GWL---PPLAAieriEVV--RGPMSSLYGSDAMGGVINIITRKV------QKEWHGSLRADA 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 276 GLGGDANGTHFIGSAAFAIGtevwdmlvaaserhlgdydPGTKGSIGELRTGAWFNPEAGQRVKhspvAYSGYVMRSRLA 355
Cdd:PRK13513 180 TLQEDSKSGDIFQTNAYASG-------------------PLIDGLLGLKVSGLLSHRSEDKIID----GYNEQRMRNGTA 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 356 KLGVALPQDQRLQFsylttQVSYDDANMLNTENQALWEKLGSSDVRAQ--NFAIDYgyapdNPLVDFKAKLYYV---DNR 430
Cdd:PRK13513 237 TFSLTPDDNNEFDF-----EIGRYVQDRNSTPGRTLALNGTNSDTQYDrnNYAITH-----NGYYDFGNSTSYIqrdETR 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 431 NrqqtlqrgitPGYSITYQTDTYGAQAQntstFALDDlSTLraNYGLEFFYDKVRPDSSQprastsavgFPAAEGMTpKG 510
Cdd:PRK13513 307 N----------PSRQMKSVDTIFNTQTS----FLLDD-HTL--SLGGQYRYEELYDKGNQ---------LPSASDLN-KL 359
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 511 DRALGSLFARLDYDYDDWLNLNAGLRYDRyrlrgDTGFNartfilgtTRQTdmPLQYAVdreeGRFSPTFGLsvKPGVDw 590
Cdd:PRK13513 360 TRWSWALFAEDEWQMTNDFALTGGIRMDQ-----DQNYG--------THWT--PRLYGV----WHLADQWTL--KGGVS- 417
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 987818758 591 lqlfatygKGWRPPAVTESLIT-GRPHGGGAEN--MYPNPFLSPERSKAWEVGFnvlkenLWFSDDRLGLKVAYFDTRVD 667
Cdd:PRK13513 418 --------TGYRSPDLRQATDNwGQLTGGGGLPalILGNSDLKPEKSISQEIGI------LWDNQENLNASVTLFNTDFK 483
|
570 580 590 600
....*....|....*....|....*....|....*....|....*....
gi 987818758 668 DFIF-MGMGMQPPGYGMAGIGNSAY--VN---NLDSTRFRGVEYQLDYD 710
Cdd:PRK13513 484 DKITeVRNCDTTNTDGQCVFNGINYdfISdriNVDKANMRGVEATFNWD 532
|
|
| STN |
pfam07660 |
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of ... |
68-110 |
3.90e-03 |
|
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of the Secretins of the bacterial type II/III secretory system as well as the TonB-dependent receptor proteins. These proteins are involved in TonB-dependent active uptake of selective substrates.
Pssm-ID: 429580 [Multi-domain] Cd Length: 51 Bit Score: 35.95 E-value: 3.90e-03
10 20 30 40
....*....|....*....|....*....|....*....|....
gi 987818758 68 QVFFDSQRFAGLGSAAVH-GEYLLADGLSQMLQGSPVEYRFSGK 110
Cdd:pfam07660 1 SILYDSDLVDGKQSVSLNvGNVTLEEALDQLLAGTGLSYEIGGN 44
|
|
| |
