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Conserved domains on  [gi|2477730800|gb|KAJ8167867|]
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hypothetical protein LV162_002585 [Aspergillus fumigatus]

Protein Classification

SLM1 family PH domain-containing protein( domain architecture ID 10193163)

SLM1 family PH (pleckstrin homology) domain-containing protein, such as yeast phosphatidylinositol 4,5-bisphosphate-binding proteins SLM1 and SLM2, which are effectors of the TORC2- and calcineurin-signaling pathways and bind phosphatidylinositol 4,5-bisphosphate through their PH domains

CATH:  2.30.29.30
Gene Ontology:  GO:0035091
SCOP:  4002395

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
BAR_4 pfam20400
BAR-like domain; This entry represents a BAR-like domain found in a variety of fungal proteins.
226-408 5.42e-85

BAR-like domain; This entry represents a BAR-like domain found in a variety of fungal proteins.


:

Pssm-ID: 466549  Cd Length: 192  Bit Score: 269.06  E-value: 5.42e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2477730800 226 SGGLADATDILRDFHRQ-GYLEANKAAEVESEVVNQLMGLRNDLQKKTKEIKSLQGDFRNSVDKEVENTRK-------TV 297
Cdd:pfam20400   1 SGGIQDVQVILRDYHRQiADQHAKLAREIESSIIPALEGLRKDLKQKIKEIKNLSGDFKNSVDKERELTRKllqkliaSV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2477730800 298 RQLHEALGLVDTDPSATSGKGDPFIIRLSVDRQIEKQIEEENYLHRAFLNLENSGRELESIVVSEIQKAYNAYASILKRE 377
Cdd:pfam20400  81 KLLDNALGSVDKDPSALTGKNDPYLLNLAVDRQLKRQIDEENYLHKAYLNLQSSGREFEKIIVGEIQKALQTYAELLKRE 160
                         170       180       190
                  ....*....|....*....|....*....|..
gi 2477730800 378 ADEAY-DTVEKLRTGPISMPHDHEWNHFIANT 408
Cdd:pfam20400 161 ADLAIqNLVEELRQGPISLPPDFEWNSFVARN 192
PH_Slm1 cd13311
Slm1 Pleckstrin homology (PH) domain; Slm1 is a component of the target of rapamycin complex 2 ...
436-540 9.26e-56

Slm1 Pleckstrin homology (PH) domain; Slm1 is a component of the target of rapamycin complex 2 (TORC2) signaling pathway. It plays a role in the regulation of actin organization and is a target of sphingolipid signaling during the heat shock response. Slm1 contains a single PH domain that binds PtdIns(4,5)P2, PtdIns(4)P, and dihydrosphingosine 1-phosphate (DHS-1P). Slm1 possesses two binding sites for anionic lipids. The non-canonical binding site of the PH domain of Slm1 is used for ligand binding, and it is proposed that beta-spectrin, Tiam1 and ArhGAP9 also have this type of phosphoinositide binding site. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


:

Pssm-ID: 270121  Cd Length: 110  Bit Score: 187.16  E-value: 9.26e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2477730800 436 EVRSGMLERKSKYLKSYTPGWYVLSPT-HLHEFKSADRVAWQTPVMSLYLPEQKLGSHSQPDSTSHKFMLKGRQTGPM-- 512
Cdd:cd13311     3 PLISGILERKSKFLKSYSKGYYVLTPAgYLHEFKSSDRKKDPAPEMSLYLPECKIGAPSNKGSKSHKFILKGKDVGSGkf 82
                          90       100
                  ....*....|....*....|....*...
gi 2477730800 513 HRGHSWVFRAESHETMMAWYEDIESLIS 540
Cdd:cd13311    83 HRGHEWVFKAESHEEMMAWWEDIKELTK 110
 
Name Accession Description Interval E-value
BAR_4 pfam20400
BAR-like domain; This entry represents a BAR-like domain found in a variety of fungal proteins.
226-408 5.42e-85

BAR-like domain; This entry represents a BAR-like domain found in a variety of fungal proteins.


Pssm-ID: 466549  Cd Length: 192  Bit Score: 269.06  E-value: 5.42e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2477730800 226 SGGLADATDILRDFHRQ-GYLEANKAAEVESEVVNQLMGLRNDLQKKTKEIKSLQGDFRNSVDKEVENTRK-------TV 297
Cdd:pfam20400   1 SGGIQDVQVILRDYHRQiADQHAKLAREIESSIIPALEGLRKDLKQKIKEIKNLSGDFKNSVDKERELTRKllqkliaSV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2477730800 298 RQLHEALGLVDTDPSATSGKGDPFIIRLSVDRQIEKQIEEENYLHRAFLNLENSGRELESIVVSEIQKAYNAYASILKRE 377
Cdd:pfam20400  81 KLLDNALGSVDKDPSALTGKNDPYLLNLAVDRQLKRQIDEENYLHKAYLNLQSSGREFEKIIVGEIQKALQTYAELLKRE 160
                         170       180       190
                  ....*....|....*....|....*....|..
gi 2477730800 378 ADEAY-DTVEKLRTGPISMPHDHEWNHFIANT 408
Cdd:pfam20400 161 ADLAIqNLVEELRQGPISLPPDFEWNSFVARN 192
PH_Slm1 cd13311
Slm1 Pleckstrin homology (PH) domain; Slm1 is a component of the target of rapamycin complex 2 ...
436-540 9.26e-56

Slm1 Pleckstrin homology (PH) domain; Slm1 is a component of the target of rapamycin complex 2 (TORC2) signaling pathway. It plays a role in the regulation of actin organization and is a target of sphingolipid signaling during the heat shock response. Slm1 contains a single PH domain that binds PtdIns(4,5)P2, PtdIns(4)P, and dihydrosphingosine 1-phosphate (DHS-1P). Slm1 possesses two binding sites for anionic lipids. The non-canonical binding site of the PH domain of Slm1 is used for ligand binding, and it is proposed that beta-spectrin, Tiam1 and ArhGAP9 also have this type of phosphoinositide binding site. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 270121  Cd Length: 110  Bit Score: 187.16  E-value: 9.26e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2477730800 436 EVRSGMLERKSKYLKSYTPGWYVLSPT-HLHEFKSADRVAWQTPVMSLYLPEQKLGSHSQPDSTSHKFMLKGRQTGPM-- 512
Cdd:cd13311     3 PLISGILERKSKFLKSYSKGYYVLTPAgYLHEFKSSDRKKDPAPEMSLYLPECKIGAPSNKGSKSHKFILKGKDVGSGkf 82
                          90       100
                  ....*....|....*....|....*...
gi 2477730800 513 HRGHSWVFRAESHETMMAWYEDIESLIS 540
Cdd:cd13311    83 HRGHEWVFKAESHEEMMAWWEDIKELTK 110
PH_20 pfam20399
PH domain; This entry represents a PH domain found in a variety of fungal proteins.
426-507 7.80e-44

PH domain; This entry represents a PH domain found in a variety of fungal proteins.


Pssm-ID: 466548  Cd Length: 84  Bit Score: 152.71  E-value: 7.80e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2477730800 426 YPGKDHPAAAEVRSGMLERKSKYLKSYTPGWYVLSPT-HLHEFKSADR-VAWQTPVMSLYLPEQKLGSHSQPDSTSHKFM 503
Cdd:pfam20399   1 YPGKDSPLVKPIRAGYLERKSKYLKSYTEGYYVLTPAgFLHEFKSSDPfKTGQAPVFSLYLPECTLGPPSDPGSSSHKFH 80

                  ....
gi 2477730800 504 LKGR 507
Cdd:pfam20399  81 LKGK 84
PH smart00233
Pleckstrin homology domain; Domain commonly found in eukaryotic signalling proteins. The ...
437-540 3.58e-08

Pleckstrin homology domain; Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.


Pssm-ID: 214574 [Multi-domain]  Cd Length: 102  Bit Score: 52.17  E-value: 3.58e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2477730800  437 VRSGMLERKSK-YLKSYTPGWYVLSPTHLHEFKSADRVAWQTPVMSLYLPEQKL--GSHSQPDSTSHKFMLKGRQtgpmh 513
Cdd:smart00233   2 IKEGWLYKKSGgGKKSWKKRYFVLFNSTLLYYKSKKDKKSYKPKGSIDLSGCTVreAPDPDSSKKPHCFEIKTSD----- 76
                           90       100
                   ....*....|....*....|....*..
gi 2477730800  514 rGHSWVFRAESHETMMAWYEDIESLIS 540
Cdd:smart00233  77 -RKTLLLQAESEEEREKWVEALRKAIA 102
 
Name Accession Description Interval E-value
BAR_4 pfam20400
BAR-like domain; This entry represents a BAR-like domain found in a variety of fungal proteins.
226-408 5.42e-85

BAR-like domain; This entry represents a BAR-like domain found in a variety of fungal proteins.


Pssm-ID: 466549  Cd Length: 192  Bit Score: 269.06  E-value: 5.42e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2477730800 226 SGGLADATDILRDFHRQ-GYLEANKAAEVESEVVNQLMGLRNDLQKKTKEIKSLQGDFRNSVDKEVENTRK-------TV 297
Cdd:pfam20400   1 SGGIQDVQVILRDYHRQiADQHAKLAREIESSIIPALEGLRKDLKQKIKEIKNLSGDFKNSVDKERELTRKllqkliaSV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2477730800 298 RQLHEALGLVDTDPSATSGKGDPFIIRLSVDRQIEKQIEEENYLHRAFLNLENSGRELESIVVSEIQKAYNAYASILKRE 377
Cdd:pfam20400  81 KLLDNALGSVDKDPSALTGKNDPYLLNLAVDRQLKRQIDEENYLHKAYLNLQSSGREFEKIIVGEIQKALQTYAELLKRE 160
                         170       180       190
                  ....*....|....*....|....*....|..
gi 2477730800 378 ADEAY-DTVEKLRTGPISMPHDHEWNHFIANT 408
Cdd:pfam20400 161 ADLAIqNLVEELRQGPISLPPDFEWNSFVARN 192
PH_Slm1 cd13311
Slm1 Pleckstrin homology (PH) domain; Slm1 is a component of the target of rapamycin complex 2 ...
436-540 9.26e-56

Slm1 Pleckstrin homology (PH) domain; Slm1 is a component of the target of rapamycin complex 2 (TORC2) signaling pathway. It plays a role in the regulation of actin organization and is a target of sphingolipid signaling during the heat shock response. Slm1 contains a single PH domain that binds PtdIns(4,5)P2, PtdIns(4)P, and dihydrosphingosine 1-phosphate (DHS-1P). Slm1 possesses two binding sites for anionic lipids. The non-canonical binding site of the PH domain of Slm1 is used for ligand binding, and it is proposed that beta-spectrin, Tiam1 and ArhGAP9 also have this type of phosphoinositide binding site. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 270121  Cd Length: 110  Bit Score: 187.16  E-value: 9.26e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2477730800 436 EVRSGMLERKSKYLKSYTPGWYVLSPT-HLHEFKSADRVAWQTPVMSLYLPEQKLGSHSQPDSTSHKFMLKGRQTGPM-- 512
Cdd:cd13311     3 PLISGILERKSKFLKSYSKGYYVLTPAgYLHEFKSSDRKKDPAPEMSLYLPECKIGAPSNKGSKSHKFILKGKDVGSGkf 82
                          90       100
                  ....*....|....*....|....*...
gi 2477730800 513 HRGHSWVFRAESHETMMAWYEDIESLIS 540
Cdd:cd13311    83 HRGHEWVFKAESHEEMMAWWEDIKELTK 110
PH_20 pfam20399
PH domain; This entry represents a PH domain found in a variety of fungal proteins.
426-507 7.80e-44

PH domain; This entry represents a PH domain found in a variety of fungal proteins.


Pssm-ID: 466548  Cd Length: 84  Bit Score: 152.71  E-value: 7.80e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2477730800 426 YPGKDHPAAAEVRSGMLERKSKYLKSYTPGWYVLSPT-HLHEFKSADR-VAWQTPVMSLYLPEQKLGSHSQPDSTSHKFM 503
Cdd:pfam20399   1 YPGKDSPLVKPIRAGYLERKSKYLKSYTEGYYVLTPAgFLHEFKSSDPfKTGQAPVFSLYLPECTLGPPSDPGSSSHKFH 80

                  ....
gi 2477730800 504 LKGR 507
Cdd:pfam20399  81 LKGK 84
PH pfam00169
PH domain; PH stands for pleckstrin homology.
437-540 3.88e-09

PH domain; PH stands for pleckstrin homology.


Pssm-ID: 459697 [Multi-domain]  Cd Length: 105  Bit Score: 54.88  E-value: 3.88e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2477730800 437 VRSGMLERKSKYLK-SYTPGWYVLSPTHLHEFKSADRVAWQTPVMSLYLPEQKLGSHSQPDSTSHK--FMLKgrqTGPMH 513
Cdd:pfam00169   2 VKEGWLLKKGGGKKkSWKKRYFVLFDGSLLYYKDDKSGKSKEPKGSISLSGCEVVEVVASDSPKRKfcFELR---TGERT 78
                          90       100
                  ....*....|....*....|....*..
gi 2477730800 514 RGHSWVFRAESHETMMAWYEDIESLIS 540
Cdd:pfam00169  79 GKRTYLLQAESEEERKDWIKAIQSAIR 105
PH smart00233
Pleckstrin homology domain; Domain commonly found in eukaryotic signalling proteins. The ...
437-540 3.58e-08

Pleckstrin homology domain; Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.


Pssm-ID: 214574 [Multi-domain]  Cd Length: 102  Bit Score: 52.17  E-value: 3.58e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2477730800  437 VRSGMLERKSK-YLKSYTPGWYVLSPTHLHEFKSADRVAWQTPVMSLYLPEQKL--GSHSQPDSTSHKFMLKGRQtgpmh 513
Cdd:smart00233   2 IKEGWLYKKSGgGKKSWKKRYFVLFNSTLLYYKSKKDKKSYKPKGSIDLSGCTVreAPDPDSSKKPHCFEIKTSD----- 76
                           90       100
                   ....*....|....*....|....*..
gi 2477730800  514 rGHSWVFRAESHETMMAWYEDIESLIS 540
Cdd:smart00233  77 -RKTLLLQAESEEEREKWVEALRKAIA 102
PH cd00821
Pleckstrin homology (PH) domain; PH domains have diverse functions, but in general are ...
438-535 1.78e-06

Pleckstrin homology (PH) domain; PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 275388 [Multi-domain]  Cd Length: 92  Bit Score: 46.77  E-value: 1.78e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2477730800 438 RSGMLERKSKY-LKSYTPGWYVLSPTHLHEFKSADRVaWQTPVMSLYLPEQKLGSHSQPDSTSHKFMLKGRQtgpmhrGH 516
Cdd:cd00821     1 KEGYLLKRGGGgLKSWKKRWFVLFEGVLLYYKSKKDS-SYKPKGSIPLSGILEVEEVSPKERPHCFELVTPD------GR 73
                          90
                  ....*....|....*....
gi 2477730800 517 SWVFRAESHETMMAWYEDI 535
Cdd:cd00821    74 TYYLQADSEEERQEWLKAL 92
PH2_FARP1-like cd13235
FERM, RhoGEF and pleckstrin domain-containing protein 1 and related proteins Pleckstrin ...
439-537 9.40e-04

FERM, RhoGEF and pleckstrin domain-containing protein 1 and related proteins Pleckstrin Homology (PH) domain, repeat 2; Members here include FARP1 (also called Chondrocyte-derived ezrin-like protein; PH domain-containing family C member 2), FARP2 (also called FIR/FERM domain including RhoGEF; FGD1-related Cdc42-GEF/FRG), and FARP6 (also called Zinc finger FYVE domain-containing protein 24). They are members of the Dbl family guanine nucleotide exchange factors (GEFs) which are upstream positive regulators of Rho GTPases. Little is known about FARP1 and FARP6, though FARP1 has increased expression in differentiated chondrocytes. FARP2 is thought to regulate neurite remodeling by mediating the signaling pathways from membrane proteins to Rac. It is found in brain, lung, and testis, as well as embryonic hippocampal and cortical neurons. FARP1 and FARP2 are composed of a N-terminal FERM domain, a proline-rich (PR) domain, Dbl-homology (DH), and two C-terminal PH domains. FARP6 is composed of Dbl-homology (DH), and two C-terminal PH domains separated by a FYVE domain. This hierarchy contains the second PH repeat. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.


Pssm-ID: 270055  Cd Length: 98  Bit Score: 39.22  E-value: 9.40e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2477730800 439 SGMLERKSKYLKSYTPGWYVLSPTHLHEFKS-ADRvawqTPVMSLYLPEQKLGSHSQPDSTSHKFMLKgrqtgpMH-RGH 516
Cdd:cd13235     6 SGYLLRKFKNSNGWQKLWVVFTNFCLFFYKShQDE----FPLASLPLLGYSVGLPSEADNIDKDYVFK------LQfKSH 75
                          90       100
                  ....*....|....*....|.
gi 2477730800 517 SWVFRAESHETMMAWYEDIES 537
Cdd:cd13235    76 VYFFRAESEYTFERWMEVIRS 96
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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