|
Name |
Accession |
Description |
Interval |
E-value |
| PLN02328 |
PLN02328 |
lysine-specific histone demethylase 1 homolog |
1-795 |
0e+00 |
|
lysine-specific histone demethylase 1 homolog
Pssm-ID: 215187 [Multi-domain] Cd Length: 808 Bit Score: 1665.13 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 1 METTAEPPQDPSDNANDVVSEDSSPETDL------------NDHQNSPETILPPSSETQSPL-PNTILDAPVSDSQDDSS 67
Cdd:PLN02328 1 METETKEPEDPADNVNDVVSEASSPETDLslspsqseqnieNDGQNSPETQSPLTELQPSPLpPNTTLDAPVSDSQGDES 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 68 DPIQPPQNPNSTFPAPPPKKRRRRKRFFTEINGNPPFRRHRIGGGLSKEVDVEALIAISVGFPVDSLTEEEIEANVVSTI 147
Cdd:PLN02328 81 SSEQQPQNPNSTEPAPPPKKRRRRKRFFTEINANPAFRRHRVRGGLGKEVDVEALIAISVGFPVDSLTEEEIEANVVSTI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 148 GGTEQANYIVVRNHILSRWRSSVSVWLTRDHALESIRAEHKALVDSAYNFLLQHGYINFGVALSIKEAQLKLNEGVERAN 227
Cdd:PLN02328 161 GGTEQANYIVVRNHILARWRSNVSNWLTRDHALESIRAEHKNLVDSAYNFLLEHGYINFGVAPVIKEAQLRSFEGVEPAN 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 228 VVVVGAGLAGLVAARQLMAMGFKVVVLEGRARPGGRVKTMILKGEGVVAAADLGGSVLTGINGNPLGVLARQMGLPLHKV 307
Cdd:PLN02328 241 VVVVGAGLAGLVAARQLLSMGFKVVVLEGRARPGGRVKTMKMKGDGVVAAADLGGSVLTGINGNPLGVLARQLGLPLHKV 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 308 RDICPLYLPDGKAVDSEIDSRIEASFNKLLDRVCKLRQAMIEEVKSVDVNLGTALEAFRHVYKVAEDPQELMLLNWHLAN 387
Cdd:PLN02328 321 RDICPLYLPDGKAVDAEIDSKIEASFNKLLDRVCKLRQAMIEEVKSVDVNLGTALEAFRHVYKVAEDPQERMLLNWHLAN 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 388 LEYANASLMSNLSMAYWDQDDPYEMGGDHCFIPGGNDTFVRELAKDLPIFYEKTVESIRYGVDGVIVYAGGQGFRGDMVL 467
Cdd:PLN02328 401 LEYANASLMSNLSMAYWDQDDPYEMGGDHCFIPGGNDTFVRELAKDLPIFYERTVESIRYGVDGVIVYAGGQEFHGDMVL 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 468 CTVPLGVLKKGSIEFVPELPQRKKDAIQRLGYGLLNKVALLFPYNFWGGEIDTFGHLTEDPSMRGEFFLFYSYSSVSGGA 547
Cdd:PLN02328 481 CTVPLGVLKKGSIEFYPELPQRKKDAIQRLGYGLLNKVALLFPYNFWGGEIDTFGHLTEDPSMRGEFFLFYSYSSVSGGP 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 548 LLIALVAGDAAVKFETMSPVESVKRVLGILRGIFHPKGIVVPDPVQSVCTRWGKDCFTYGSYSYVAVGSSGDDYDILAES 627
Cdd:PLN02328 561 LLIALVAGDAAVKFETLSPVESVKRVLQILRGIFHPKGIVVPDPVQAVCTRWGKDCFTYGSYSYVAVGSSGDDYDILAES 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 628 VGDGRVFFAGEATNKQYPATMHGAFLSGMREAANILRVANRRSLSVIDKVNNSLEEIDDLNELYDTPNLKFGSFSILFDP 707
Cdd:PLN02328 641 VGDGRVFFAGEATNKQYPATMHGAFLSGMREAANILRVARRRSLCIDDKVNNDEEEDDCLDQLFDTPDLTFGSFSILFDP 720
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 708 RSNDGESLSLLRVKFQGGESDSCFLCLYGLISRKQAVELSELQDDGKRMEMLYNNFQIRLVGRKGLPNAGESLLTYIKEA 787
Cdd:PLN02328 721 RSNDPESLSLLRVKFQGEKPDSCFLCLYGLVSRKQAIELGELDDDGKRNEYLYEKFQVVLVGRKGLSQEGESLISSIKEA 800
|
....*...
gi 2277090391 788 RSKLNVGN 795
Cdd:PLN02328 801 RLNLQVFD 808
|
|
| PLN03000 |
PLN03000 |
amine oxidase |
113-789 |
0e+00 |
|
amine oxidase
Pssm-ID: 178578 [Multi-domain] Cd Length: 881 Bit Score: 924.04 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 113 LSKEVDVEALIAISVGFPVDSLTEEEIEANVVSTIGGTEQANYIVVRNHILSRWRSSVSVWLTRDHALESIRAEHKALVD 192
Cdd:PLN03000 75 INKEATTEALLALTAGFPADSLTEEEIEFGVVPIVGGIEQVNYILIRNHIISKWRENISSWVTKEMFLGSIPKHCSSLLD 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 193 SAYNFLLQHGYINFGVALSIKEaqlKLNEGVERANVVVVGAGLAGLVAARQLMAMGFKVVVLEGRARPGGRVKTMILKGE 272
Cdd:PLN03000 155 SAYNYLVTHGYINFGIAQAIKD---KFPAQSSKSSVVIVGAGLSGLAAARQLMRFGFKVTVLEGRKRPGGRVYTKKMEAN 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 273 GVVAAADLGGSVLTGINGNPLGVLARQMGLPLHKVRDICPLYLPDGKAVDSEIDSRIEASFNKLLDRVCKLRQAMIEevK 352
Cdd:PLN03000 232 RVGAAADLGGSVLTGTLGNPLGIIARQLGSSLYKVRDKCPLYRVDGKPVDPDVDLKVEVAFNQLLDKASKLRQLMGD--V 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 353 SVDVNLGTALEAFRHVYKVAEDPQELMLLNWHLANLEYANASLMSNLSMAYWDQDDPYEMGGDHCFIPGGNDTFVRELAK 432
Cdd:PLN03000 310 SMDVSLGAALETFRQVSGNDVATEEMGLFNWHLANLEYANAGLVSKLSLAFWDQDDPYDMGGDHCFLPGGNGRLVQALAE 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 433 DLPIFYEKTVESIRYGVDGVIVYAGGQGFRGDMVLCTVPLGVLKKGSIEFVPELPQRKKDAIQRLGYGLLNKVALLFPYN 512
Cdd:PLN03000 390 NVPILYEKTVQTIRYGSNGVKVIAGNQVYEGDMVLCTVPLGVLKNGSIKFVPELPQRKLDCIKRLGFGLLNKVAMLFPYV 469
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 513 FWGGEIDTFGHLTEDPSMRGEFFLFYSYSSVSGGALLIALVAGDAAVKFETMSPVESVKRVLGILRGIFHPKGIVVPDPV 592
Cdd:PLN03000 470 FWSTDLDTFGHLTEDPNYRGEFFLFYSYAPVAGGPLLIALVAGEAAHKFETMPPTDAVTRVLHILRGIYEPQGINVPDPL 549
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 593 QSVCTRWGKDCFTYGSYSYVAVGSSGDDYDILAESVGDGRVFFAGEATNKQYPATMHGAFLSGMREAANILRVANRRSLS 672
Cdd:PLN03000 550 QTVCTRWGGDPFSLGSYSNVAVGASGDDYDILAESVGDGRLFFAGEATTRRYPATMHGAFVTGLREAANMAQSAKARGIR 629
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 673 V-IDK--VNNSLEEIDDLNELYDTPNLKFGSFSILFDPRSNDGESLSLLRVKFQG---GESD----------------SC 730
Cdd:PLN03000 630 KrIDRnpSKNAHSCAILLADLFRDPDLEFGSFAIIFSRRNPDPKSPAILRVTLSEprkRNEDpkadqhsnkilfqqlqSH 709
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2277090391 731 F-----LCLYGLISRKQAVELSELQD-DGKRMEMLYNNFQIRLVGRKGLPNAGESLLTYIKEARS 789
Cdd:PLN03000 710 FnqqqqIQVYTLLTRQQALDLREVRGgDEKRLNYLCETLGVKLVGRKGLGPGADSVIASIKAERT 774
|
|
| PLN02529 |
PLN02529 |
lysine-specific histone demethylase 1 |
105-788 |
0e+00 |
|
lysine-specific histone demethylase 1
Pssm-ID: 178144 [Multi-domain] Cd Length: 738 Bit Score: 829.53 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 105 RRHRIGGGLSKEVDVEALIAISVGFPVDSLTEEEIEANVVSTIGGTEQANYIVVRNHILSRWRSSVSVWLTRDHALESIR 184
Cdd:PLN02529 43 KKNRTKQDLEKETETEAMIALSVGFPIDALLEEEIRAGVVRELGGKEQNDYIVVRNHILARWRSNVGIWLSKGQIKETVS 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 185 AEHKALVDSAYNFLLQHGYINFGVALSIKEAQLKL-NEGveraNVVVVGAGLAGLVAARQLMAMGFKVVVLEGRARPGGR 263
Cdd:PLN02529 123 SEYEHLISAAYDFLLYNGYINFGVSPSFASPIPEEgTEG----SVIIVGAGLAGLAAARQLLSFGFKVVVLEGRNRPGGR 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 264 VKTMILKGEGVVAAADLGGSVLTGINGNPLGVLARQMGLPLHKVRDICPLYLPDGKAVDSEIDSRIEASFNKLLDRVCKL 343
Cdd:PLN02529 199 VYTQKMGRKGQFAAVDLGGSVITGIHANPLGVLARQLSIPLHKVRDNCPLYKPDGALVDKEIDSNIEFIFNKLLDKVTEL 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 344 RQAMieEVKSVDVNLGTALEAFRHVYKVAEDPQELMLLNWHLANLEYANASLMSNLSMAYWDQDDPYEMGGDHCFIPGGN 423
Cdd:PLN02529 279 RQIM--GGFANDISLGSVLERLRQLYGVARSTEERQLLDWHLANLEYANAGCLSDLSAAYWDQDDPYEMGGDHCFLAGGN 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 424 DTFVRELAKDLPIFYEKTVESIRYGVDGVIVYAGGQGFRGDMVLCTVPLGVLKKGSIEFVPELPQRKKDAIQRLGYGLLN 503
Cdd:PLN02529 357 WRLINALCEGVPIFYGKTVDTIKYGNDGVEVIAGSQVFQADMVLCTVPLGVLKKRTIRFEPELPRRKLAAIDRLGFGLLN 436
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 504 KVALLFPYNFWGGEIDTFGHLTEDPSMRGEFFLFYSYSSVSGGALLIALVAGDAAVKFETMSPVESVKRVLGILRGIFHP 583
Cdd:PLN02529 437 KVAMVFPSVFWGEELDTFGCLNESSNKRGEFFLFYGYHTVSGGPALVALVAGEAAQRFENTDPSTLLHRVLSVLRGIYNP 516
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 584 KGIVVPDPVQSVCTRWGKDCFTYGSYSYVAVGSSGDDYDILAESVGdGRVFFAGEATNKQYPATMHGAFLSGMREAANIL 663
Cdd:PLN02529 517 KGINVPDPIQTICTRWGSDPLSYGSYSHVRVQSSGSDYDILAESVS-GRLFFAGEATTRQYPATMHGAFLSGLREASRIL 595
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 664 RVAN------RRSLSVIDKVNNsleeiDDLNELYDTPNLKFGSFSILFDPRSNDGESLSLLRVKFQGGESDSCF-LCLYG 736
Cdd:PLN02529 596 HVARsqqsnsRKSMQRNSGVSN-----DVLIDLFKRPDLAFGKFSFIFNPLTEDPKSMGIMRVTFDNSGDDLNLpLQLYT 670
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....
gi 2277090391 737 LISRKQA--VELSELQDDGKrMEMLYNNFQIRLVGRKGLPNAGESLLTYIKEAR 788
Cdd:PLN02529 671 VLSREQAhkLQLDEGSNESK-LSCLMKNLGLKLMGPSSLVNTGGSLISTIANAR 723
|
|
| PLN02976 |
PLN02976 |
amine oxidase |
219-693 |
1.00e-115 |
|
amine oxidase
Pssm-ID: 215527 [Multi-domain] Cd Length: 1713 Bit Score: 384.99 E-value: 1.00e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 219 LNEGVERANVVVVGAGLAGLVAARQLMAMGFKVVVLEGRARPGGRVKTmilKGEGVVAAADLGGSVLTGINGN------- 291
Cdd:PLN02976 687 LCDSVDRKKIIVVGAGPAGLTAARHLQRQGFSVTVLEARSRIGGRVYT---DRSSLSVPVDLGASIITGVEADvaterrp 763
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 292 -PLGVLARQMGLPLHKVRDICPLY-LPDGKAVDSEIDSRIEASFNKLLDRVCKL----------------------RQAM 347
Cdd:PLN02976 764 dPSSLICAQLGLELTVLNSDCPLYdVVTGEKVPADLDEALEAEYNSLLDDMVLLvaqkgehamkmsledgleyalkRRRM 843
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 348 IEEVKSVDVN-LGTALEAFRHVYKVAED--------------PQELMLLNWHLANLEYANASLMSNLSMAYWDQDDPYE- 411
Cdd:PLN02976 844 PRPGVDIDETeLGNAADDLYDSASTGVDgghcekeskedvlsPLERRVMNWHFAHLEYGCAALLKEVSLPYWNQDDVYGg 923
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 412 MGGDHCFIPGGNDTFVRELAKDLPIFYEKTVESIRYGVDGV-----------IVYAGGQGFRGDMVLCTVPLGVLKKGSI 480
Cdd:PLN02976 924 FGGAHCMIKGGYSNVVESLAEGLDIHLNHVVTDVSYGSKDAgasgssrkkvkVSTSNGSEFLGDAVLITVPLGCLKAETI 1003
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 481 EFVPELPQRKKDAIQRLGYGLLNKVALLFPYNFWGGEIDTFGHLTEDPSMRGEFFLFYSYSSVSGGALLIALVAGDAAVK 560
Cdd:PLN02976 1004 KFSPPLPDWKYSSIQRLGFGVLNKVVLEFPEVFWDDSVDYFGATAEETDLRGQCFMFWNVKKTVGAPVLIALVVGKAAID 1083
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 561 FETMSPVESVKRVLGILRGIFhpKGIVVPDPVQSVCTRWGKDCFTYGSYSYVAVGSSGDDYDILAESVGDGrVFFAGEAT 640
Cdd:PLN02976 1084 GQSMSSSDHVNHALMVLRKLF--GEALVPDPVASVVTDWGRDPFSYGAYSYVAIGASGEDYDILGRPVENC-LFFAGEAT 1160
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2277090391 641 NKQYPATMHGAFLSGMREAANI----------------LRVANRRSLSVIDKVN---NSLEEIDDLNELYDT 693
Cdd:PLN02976 1161 CKEHPDTVGGAMMSGLREAVRIidilntgndytaeveaLETAQRHSESERDEVRditKRLEAVELSNVLYKN 1232
|
|
| YobN |
COG1231 |
Monoamine oxidase [Amino acid transport and metabolism]; |
219-664 |
1.31e-93 |
|
Monoamine oxidase [Amino acid transport and metabolism];
Pssm-ID: 440844 [Multi-domain] Cd Length: 440 Bit Score: 299.91 E-value: 1.31e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 219 LNEGVERANVVVVGAGLAGLVAARQLMAMGFKVVVLEGRARPGGRVKTMILKGEGVVaaADLGGSVLTGINGNPLGvLAR 298
Cdd:COG1231 1 MSRRARGKDVVIVGAGLAGLAAARELRKAGLDVTVLEARDRVGGRVWTLRFGDDGLY--AELGAMRIPPSHTNLLA-LAR 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 299 QMGLPLHKVRDICP--LYLPDGKAVDSEIDSRIEASFNKLLDrvcKLRQAMIEEVKSVD--------VNLGTALEAFRhv 368
Cdd:COG1231 78 ELGLPLEPFPNENGnaLLYLGGKRVRAGEIAADLRGVAELLA---KLLRALAAALDPWAhpaaeldrESLAEWLRRNG-- 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 369 ykVAEDPQELMLlnwHLANLEYANASlmSNLSMAYWDQD-DPYEMGGDHCFIPGGNDTFVRELAKDLP--IFYEKTVESI 445
Cdd:COG1231 153 --ASPSARRLLG---LLGAGEYGADP--DELSLLDLLRYaASAGGGAQQFRIVGGMDQLPRALAAELGdrIRLGAPVTRI 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 446 RYGVDGVIV-YAGGQGFRGDMVLCTVPLGVLKKgsIEFVPELPQRKKDAIQRLGYGLLNKVALLFPYNFWGGEIDTFGHL 524
Cdd:COG1231 226 RQDGDGVTVtTDDGGTVRADAVIVTVPPSVLRR--IEFDPPLPAAKRAAIQRLPYGAAIKVFLQFDRPFWEEDGLYGGIS 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 525 TEDPSMRGEFFLFYSYSsvSGGALLIALVAGDAAVKFETMSPVESVKRVLGILRGIFhpkGIVVPDPVQSVCTRWGKDCF 604
Cdd:COG1231 304 LTDLPIRQTWYPSNGPD--GGAGVLLGYVGGDDARALAALSPEERVAAALEQLARIF---GVYAAEPVDYVSTDWGRDPW 378
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 605 TYGSYSYVAVGSSGDDYDILAESvgDGRVFFAGEATNKQYPATMHGAFLSGMREAANILR 664
Cdd:COG1231 379 SRGAYAAAPPGQLTAAGPALAEP--DGRIHFAGEHTSDEWPGWVEGALESGERAAAEILA 436
|
|
| Amino_oxidase |
pfam01593 |
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ... |
235-663 |
1.64e-88 |
|
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.
Pssm-ID: 396255 [Multi-domain] Cd Length: 446 Bit Score: 286.69 E-value: 1.64e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 235 LAGLVAARQLMAMGFKVVVLEGRARPGGRVKTMILKGEGVvaaaDLGGSVLTGiNGNPLGVLARQMGLP----LHKVRDI 310
Cdd:pfam01593 1 LAGLAAARELLRAGHDVTVLEARDRVGGRIRTVRDDGFLI----ELGAMWFHG-AQPPLLALLKELGLEdrlvLPDPAPF 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 311 CPLYLPDGKAVDSEIdSRIEASFNKLLDRVC------KLR-------QAMIEEVKSVDVNLGTALEAFRHVYKVAEDPQE 377
Cdd:pfam01593 76 YTVLFAGGRRYPGDF-RRVPAGWEGLLEFGRllsipeKLRlglaalaSDALDEFDLDDFSLAESLLFLGRRGPGDVEVWD 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 378 LMLLNWHLANLEYANASLMSNLS-----MAYWDQDDPYEMGGDHCFIPGGNDTFVRELAKDLP---IFYEKTVESIRYGV 449
Cdd:pfam01593 155 RLIDPELFAALPFASGAFAGDPSelsagLALPLLWALLGEGGSLLLPRGGLGALPDALAAQLLggdVRLNTRVRSIDREG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 450 DGVIV-YAGGQGFRGDMVLCTVPLGVLKKgsIEFVPELPQRKKDAIQRLGYGLLNKVALLFPYNFWGGEIDtFGHLTEDP 528
Cdd:pfam01593 235 DGVTVtLTDGEVIEADAVIVTVPLGVLKR--ILFTPPLPPEKARAIRNLGYGPVNKVHLEFDRKFWPDLGL-LGLLSELL 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 529 SMRGEFFLFYSYSS--VSGGALLIA--LVAGDAAVKFETMSPVESVKRVLGILRGIFhpkGIVVPDPVQSVCTRWGKDCF 604
Cdd:pfam01593 312 TGLGTAFSWLTFPNraPPGKGLLLLvyVGPGDRARELEGLSDEELLQAVLRDLRKLF---GEEAPEPLRVLVSDWHTDPW 388
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 2277090391 605 TYGSYSYVAVGSSGDDYDILAESVgDGRVFFAGEATNKQYPATMHGAFLSGMREAANIL 663
Cdd:pfam01593 389 PRGSYSLPQYGPGHDDYRPLARTP-DPGLFFAGEHTSTGYPGTVEGAIESGRRAARAVL 446
|
|
| PLN02268 |
PLN02268 |
probable polyamine oxidase |
228-664 |
4.39e-75 |
|
probable polyamine oxidase
Pssm-ID: 177909 [Multi-domain] Cd Length: 435 Bit Score: 250.37 E-value: 4.39e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 228 VVVVGAGLAGLVAARQLMAMGFKVVVLEGRARPGGRVKTMILKGEGVvaaaDLGGSVLTGI-NGNPLGVLARQMGLPLHK 306
Cdd:PLN02268 3 VIVIGGGIAGIAAARALHDASFKVTLLESRDRIGGRVHTDYSFGFPV----DMGASWLHGVcNENPLAPLIGRLGLPLYR 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 307 V---------RDI--CPLYLPDGKAVDSEIDSRIEASFNKLLDRVCKLRQAMIEevksvDVNLgtaLEAFRHVykVAEDP 375
Cdd:PLN02268 79 TsgdnsvlydHDLesYALFDMDGNQVPQELVTKVGETFERILEETEKVRDEHEE-----DMSL---LQAISIV--LERHP 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 376 ---QELM---LLNWHLANLEYANASLMSNLSMAYWDQDDPYEmgGDHCFIPGGNDTFVRELAKDLPIFYEKTVESIRYGV 449
Cdd:PLN02268 149 elrLEGLaheVLQWYLCRMEGWFAADADTISLKSWDQEELLE--GGHGLMVRGYDPVINTLAKGLDIRLNHRVTKIVRRY 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 450 DGVIVYA-GGQGFRGDMVLCTVPLGVLKKGSIEFVPELPQRKKDAIQRLGYGLLNKVALLFPYNFWgGEIDTFGHLTEDP 528
Cdd:PLN02268 227 NGVKVTVeDGTTFVADAAIIAVPLGVLKANIIKFEPELPEWKEEAISDLGVGIENKIALHFDSVFW-PNVEFLGVVAPTS 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 529 SMRGEFFLFYsysSVSGGALLIALVAGDAAVKFETMSPVESVKRVLGILRGIFhPKGivvPDPVQSVCTRWGKDCFTYGS 608
Cdd:PLN02268 306 YGCSYFLNLH---KATGHPVLVYMPAGRLARDIEKLSDEAAANFAMSQLKKML-PDA---TEPVQYLVSRWGSDPNSLGC 378
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 2277090391 609 YSYVAVGSSGDDYDILAESVGDgrVFFAGEATNKQYPATMHGAFLSGMREAANILR 664
Cdd:PLN02268 379 YSYDLVGKPHDLYERLRAPVDN--LFFAGEATSSDFPGSVHGAYSTGVMAAEECRM 432
|
|
| PLN02568 |
PLN02568 |
polyamine oxidase |
225-664 |
2.10e-49 |
|
polyamine oxidase
Pssm-ID: 215308 [Multi-domain] Cd Length: 539 Bit Score: 182.72 E-value: 2.10e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 225 RANVVVVGAGLAGLVAARQLMAMG-----FKVVVLEGRARPGGRVKTMILKGEGVvaaaDLGGSVLTGINGNPLGVLARQ 299
Cdd:PLN02568 5 KPRIVIIGAGMAGLTAANKLYTSSaandmFELTVVEGGDRIGGRINTSEFGGERI----EMGATWIHGIGGSPVYKIAQE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 300 MGLPLHKVRDICPLYLPD--------GKAVDSEIDSRIEASFNKLLDRVCKLRQAMIEEVKSVDVNL------------G 359
Cdd:PLN02568 81 AGSLESDEPWECMDGFPDrpktvaegGFEVDPSIVESISTLFRGLMDDAQGKLIEPSEVDEVDFVKLaakaarvcesggG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 360 TALEAFRH----VY--KVAEDPQELMLLNWHLANLEYANASLMSNLSMAYWDQDD----------PYEM-GGDHCFIPGG 422
Cdd:PLN02568 161 GSVGSFLRrgldAYwdSVSADEQIKGYGGWSRKLLEEAIFTMHENTQRTYTSADDlstldlaaesEYRMfPGEEITIAKG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 423 NDTFVRELAKDLP---IFYEKTVESIRYGVDGV-IVYAGGQGFRGDMVLCTVPLGVLKKGSIE----FVPELPQRKKDAI 494
Cdd:PLN02568 241 YLSVIEALASVLPpgtIQLGRKVTRIEWQDEPVkLHFADGSTMTADHVIVTVSLGVLKAGIGEdsglFSPPLPDFKTDAI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 495 QRLGYGLLNKVALLF--PYNFWGGEIDTF--------GHLTEDPS------MRGEFFLF--YSYSSVsggalLIALVAGD 556
Cdd:PLN02568 321 SRLGFGVVNKLFVELspRPDGSPEDVAKFpflqmafhRSDSEARHdkipwwMRRTASICpiHKNSSV-----LLSWFAGK 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 557 AAVKFETMSPVEsvkrvlgILRGI------FHPKGIVVPDPVQSVC--------------------TRWGKDCFTYGSYS 610
Cdd:PLN02568 396 EALELEKLSDEE-------IIRGVqttlssFLKRRVAGLGSQSHPLcnggassndgsrwkfvkvlkSKWGTDPLFLGSYS 468
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2277090391 611 YVAVGSSGDDYDILAESVGDG-----------RVFFAGEATNKQYPATMHGAFLSGMREAANILR 664
Cdd:PLN02568 469 YVAVGSSGDDLDRMAEPLPRIsdhdqaggpplQLLFAGEATHRTHYSTTHGAYFSGLREANRLLQ 533
|
|
| PLN02676 |
PLN02676 |
polyamine oxidase |
208-663 |
9.67e-41 |
|
polyamine oxidase
Pssm-ID: 215362 [Multi-domain] Cd Length: 487 Bit Score: 156.80 E-value: 9.67e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 208 VALSIKEAQLKLNEGVERANVVVVGAGLAGLVAARQLMAMGFK-VVVLEGRARPGGRVKTMILKGEGVvaaaDLGGSVLT 286
Cdd:PLN02676 9 VLLAVHLFAVAAMDAKPSPSVIIVGAGMSGISAAKTLSEAGIEdILILEATDRIGGRMRKANFAGVSV----ELGANWVE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 287 GING---NPLGVLARQMGLPLHkVRDICPL----YLPDGKAVDSEIdsrIEASFNKLLDRV--CKLRQAMIEEVKSVDVN 357
Cdd:PLN02676 85 GVGGpesNPIWELANKLKLRTF-YSDFDNLssniYKQDGGLYPKKV---VQKSMKVADASDefGENLSISLSAKKAVDIS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 358 LGTALEAFRHVYKVaedPQElMLLNWHLANLEYANASLMSNLSMAYwdqddP----YEMGGDHCFI--PGGNDTFVRELA 431
Cdd:PLN02676 161 ILTAQRLFGQVPKT---PLE-MVIDYYNYDYEFAEPPRVTSLKNTE-----PnptfVDFGEDEYFVadPRGYESLVYYLA 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 432 K-----------DLPIFYEKTVESIRYGVDGVIVYA-GGQGFRGDMVLCTVPLGVLKKGSIEFVPELPQRKKDAIQRLGY 499
Cdd:PLN02676 232 EqflstksgkitDPRLKLNKVVREISYSKNGVTVKTeDGSVYRAKYVIVSVSLGVLQSDLIKFKPPLPDWKIEAIYQFDM 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 500 GLLNKVALLFPYNFWggeidtfghltedPSMRG-EFFLFYS----YSSV--------SGGALLIALVAGDAAVKFETMSP 566
Cdd:PLN02676 312 AVYTKIFLKFPYKFW-------------PSGPGtEFFLYAHerrgYYPFwqhleneyPGSNVLFVTVTDEESRRIEQQPD 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 567 VESVKRVLGILRGIFHPKgivVPDPVQSVCTRWGKDCFTYGSYSYVAVGSSGDDYDILAESVgdGRVFFAGEATNKQYPA 646
Cdd:PLN02676 379 SETKAEIMEVLRKMFGPN---IPEATDILVPRWWSNRFFKGSYSNWPIGVSRYEFDQIRAPV--GRVYFTGEHTSEKYNG 453
|
490
....*....|....*..
gi 2277090391 647 TMHGAFLSGMrEAANIL 663
Cdd:PLN02676 454 YVHGAYLAGI-DTANDL 469
|
|
| SWIRM |
pfam04433 |
SWIRM domain; This SWIRM domain is a small alpha-helical domain of about 85 amino acid ... |
132-206 |
2.91e-17 |
|
SWIRM domain; This SWIRM domain is a small alpha-helical domain of about 85 amino acid residues found in chromosomal proteins. It contains a helix-turn helix motif and binds to DNA.
Pssm-ID: 461307 [Multi-domain] Cd Length: 78 Bit Score: 76.83 E-value: 2.91e-17
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2277090391 132 DSLTEEE--IEANVVSTIGGTeQANYIVVRNHILSRWRSSVSVWLTRDHALESIRAEHkALVDSAYNFLLQHGYINF 206
Cdd:pfam04433 4 DKLHPIEkrLLPEFFNGKSKT-PEVYLEIRNFILNLWRENPKEYLTKTDARRALKGDV-NLISRIHEFLERWGLINF 78
|
|
| HemY |
COG1232 |
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ... |
225-601 |
4.36e-15 |
|
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis
Pssm-ID: 440845 [Multi-domain] Cd Length: 443 Bit Score: 78.34 E-value: 4.36e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 225 RANVVVVGAGLAGLVAARQLMAMGFKVVVLEGRARPGGRVKTmiLKGEGVVaaADLGG-SVLTgiNGNPLGVLARQMGL- 302
Cdd:COG1232 1 MKRVAVIGGGIAGLTAAYRLAKAGHEVTVLEASDRVGGLIRT--VEVDGFR--IDRGPhSFLT--RDPEVLELLRELGLg 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 303 -----PLHKVRDIcplyLPDGKAVDseI-DSRIEASFNKLLDRVCKLRQAMIEEVKSVDVNLGTALEAF------RHVYK 370
Cdd:COG1232 75 delvwPNTRKSYI----YYGGKLHP--LpQGPLALLRSPLLSLAGKLRALLELLAPRRPPGEDESLAEFvrrrfgREVYE 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 371 V----------AEDPQELmLLNW---HLANLEYANASLMSNLsMAYWDQDDPYEMggdhcFIP--GGNDTFVRELAKDLP 435
Cdd:COG1232 149 RlvepllegvyAGDPDEL-SADWafpRLKRLELEHGSLIKGA-LALRKGAKAGEV-----FGYlrGGLGTLVEALAEALE 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 436 ---IFYEKTVESIRYGVDGVIV-YAGGQGFRGDMVLCTVPLGVLkkgsIEFVPELPQRKKDAIQRLGYGLLNKVALLFPy 511
Cdd:COG1232 222 ageIRLGTRVTAIEREGGGWRVtTSDGETIEADAVVSATPAPAL----ARLLAPLPPEVAAALAGIPYASVAVVALGFD- 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 512 nfwGGEI---DTFG---HLTEDPSMRGefFLFYS----YSSVSGGALLIALVAGDAAVKFETMSPVESVKRVLGILRGIF 581
Cdd:COG1232 297 ---RPDLpppDGFGwlvPRDEGVPILA--VTFSSnkwpHRAPDGKVLLRLEVGGAGDPELWQLSDEELVALALADLRKLL 371
|
410 420
....*....|....*....|
gi 2277090391 582 HPKGivvpDPVQSVCTRWGK 601
Cdd:COG1232 372 GIDA----EPVDTRVVRWPK 387
|
|
| COG1233 |
COG1233 |
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ... |
228-530 |
6.33e-13 |
|
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 440846 [Multi-domain] Cd Length: 491 Bit Score: 71.80 E-value: 6.33e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 228 VVVVGAGLAGLVAARQLMAMGFKVVVLEGRARPGGRVKTMILKGegvvAAADLGGSVLTgiNGNPLGVLARQMG----LP 303
Cdd:COG1233 6 VVVIGAGIGGLAAAALLARAGYRVTVLEKNDTPGGRARTFERPG----FRFDVGPSVLT--MPGVLERLFRELGledyLE 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 304 LHKVRDICPLYLPDGKAVDSEID-SRIEASFNK-----------LLDRVCKLRQAMIE-----------EVKSVDVNLGT 360
Cdd:COG1233 80 LVPLDPAYRVPFPDGRALDLPRDlERTAAELERlfpgdaeayrrFLAELRRLYDALLEdllyrpllslrDLLRPLALARL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 361 ALEAFRHVYKVA----EDPQELMLLNWHLANL---EYANASLMSNLSMAYwdqddpYEMGGDHCfiPGGNDTFVRELAKD 433
Cdd:COG1233 160 LRLLLRSLRDLLrryfKDPRLRALLAGQALYLglsPDRTPALYALIAYLE------YAGGVWYP--KGGMGALADALARL 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 434 L-----PIFYEKTVESIRY---GVDGVIVyAGGQGFRGDMVLCTVPLGVLKKgsiEFVPE--LPQRKKDAIQRLGYGL-- 501
Cdd:COG1233 232 AeelggEIRTGAEVERILVeggRATGVRL-ADGEEIRADAVVSNADPAHTYL---RLLGEeaLPARYRRRLERFRYSPsa 307
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 2277090391 502 -------------LNKVALLFPYNFWGGEIDTF-GHLTEDPSM 530
Cdd:COG1233 308 fklylgldgplpgLAHHTIHLSEDYEAAFDDIFrGRLPEDPSL 350
|
|
| NAD_binding_8 |
pfam13450 |
NAD(P)-binding Rossmann-like domain; |
230-293 |
1.73e-10 |
|
NAD(P)-binding Rossmann-like domain;
Pssm-ID: 433218 [Multi-domain] Cd Length: 67 Bit Score: 57.16 E-value: 1.73e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2277090391 230 VVGAGLAGLVAARQLMAMGFKVVVLEGRARPGGRVKTMILKGEGVvaaaDLGGSVLTGINGNPL 293
Cdd:pfam13450 1 IVGAGLAGLVAAALLAKRGFRVLVLEKRDRLGGNAYSYRVPGYVF----DYGAHIFHGSDEPNV 60
|
|
| COG3380 |
COG3380 |
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only]; |
224-266 |
2.43e-09 |
|
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];
Pssm-ID: 442607 [Multi-domain] Cd Length: 331 Bit Score: 59.51 E-value: 2.43e-09
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 2277090391 224 ERANVVVVGAGLAGLVAARQLMAMGFKVVVLEGRARPGGRVKT 266
Cdd:COG3380 2 SMPDIAIIGAGIAGLAAARALQDAGHEVTVFEKSRGVGGRMAT 44
|
|
| COG3349 |
COG3349 |
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ... |
228-670 |
2.55e-09 |
|
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];
Pssm-ID: 442577 [Multi-domain] Cd Length: 445 Bit Score: 60.25 E-value: 2.55e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 228 VVVVGAGLAGLVAARQLMAMGFKVVVLEGRARPGGRVKTMILKGEGVVaaADLGGSVLTGINGNPLGvLARQMGLPLHKV 307
Cdd:COG3349 6 VVVVGGGLAGLAAAVELAEAGFRVTLLEARPRLGGRARSFPDPDTGLP--IDNGQHVLLGCYRNTLD-LLRRIGAADNLV 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 308 -RDICPLYLPDGKAVDSEiDSRIEASFN-----------KLLDRV--------CKLRQAMIEEvksvDVNLGTALEAFR- 366
Cdd:COG3349 83 gPEPLQFPLPGGRRWTLR-APRLPAPLHllrallrapglSLADRLallrlltaCRERRWRELD----DISVADWLRRHGq 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 367 --HVYKVAEDPQELMLLNwhlANLEYANASLMSN-LSMAYWDQDDPYEMGgdhcfIPGG--NDTFVRELAKDL-----PI 436
Cdd:COG3349 158 spRLIRRLWEPLLLAALN---TPPEQASARLALTvLRETLLAGPAASDLL-----VPRGplSELFVDPALAYLearggEV 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 437 FYEKTVESIRY---GVDGVIVyAGGQGFRGDMVLCTVPLGVLKKgsieFVPELPQRK-KDAIQRLGYGLLNKVALLFPYN 512
Cdd:COG3349 230 RLGTRVRALEFdggRVTGLVL-ADGETVPADAVVLAVPPEVAAR----LLPELARLPeLGLLAPLEYSPIVNVHLWLDRP 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 513 FWGGEIDTFGhLTEDPSMrgefFLFYSYSSVSGGALLIALVAGdAAVKFETMSPVESVKRVLGILRGIFhpkGIVVPDPV 592
Cdd:COG3349 305 VTLGPPPFAG-LVGSTSQ----WVFDRGAGDGGQGGVLSVVIS-AADRLLDLSREELAAEVWAELAALL---PAAREALP 375
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 593 qsvctRWGKD--------CFTYGSYSY---VAVGSSGddydilaesvgdgrVFFAGEATNKQYPATMHGAFLSGMREAAN 661
Cdd:COG3349 376 -----VWSRVvrekratfAATPGSDRLrpgARTPIPN--------------LFLAGDWTATGLPATMEGAVRSGRRAANA 436
|
....*....
gi 2277090391 662 ILRVANRRS 670
Cdd:COG3349 437 ILARLGRPA 445
|
|
| CzcO |
COG2072 |
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ... |
220-262 |
5.61e-08 |
|
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];
Pssm-ID: 441675 [Multi-domain] Cd Length: 414 Bit Score: 56.02 E-value: 5.61e-08
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 2277090391 220 NEGVERANVVVVGAGLAGLVAARQLMAMGFKVVVLEGRARPGG 262
Cdd:COG2072 1 TAATEHVDVVVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVGG 43
|
|
| crtI_fam |
TIGR02734 |
phytoene desaturase; Phytoene is converted to lycopene by desaturation at four (two ... |
228-466 |
1.21e-07 |
|
phytoene desaturase; Phytoene is converted to lycopene by desaturation at four (two symmetrical pairs of) sites. This is achieved by two enzymes (crtP and crtQ) in cyanobacteria (Gloeobacter being an exception) and plants, but by a single enzyme in most other bacteria and in fungi. This single enzyme is called the bacterial-type phytoene desaturase, or CrtI. Most members of this family, part of the larger pfam01593, which also contains amino oxidases, are CrtI itself; it is likely that all members act on either phytoene or on related compounds such as dehydrosqualene, for carotenoid biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other]
Pssm-ID: 274273 [Multi-domain] Cd Length: 495 Bit Score: 54.98 E-value: 1.21e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 228 VVVVGAGLAGLVAARQLMAMGFKVVVLEGRARPGGRvkTMILKGEGVVaaADLGGSVLTgingNP--LGVLARQMGLPLH 305
Cdd:TIGR02734 1 AVVIGAGFGGLALAIRLAAAGIPVTVVEQRDKPGGR--AGVLEDDGFR--FDTGPTVIT----MPeaLEELFALAGRDLA 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 306 KVRDICPL------YLPDGKAVD-----SEIDSRIEaSFNKllDRVCKLRQAMI--EEVKSVD-VNLGT----------- 360
Cdd:TIGR02734 73 DYVELVPLdpfyrlCWEDGSQLDvdndqEELEAQIA-RFNP--GDVAGYRRFLDyaERVYREGyRKLGYvpflsprdllr 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 361 -------ALEAFRHVYKVA----EDPQELMLLNWH--LANLEYANASLMSNLsMAYWDQDDP--YEMGGDHCFIPGgndt 425
Cdd:TIGR02734 150 adapqllALLAWRSLYSKVarffSDERLRQAFSFHalFLGGNPFRTPSIYAL-ISALEREWGvwFPRGGTGALVAA---- 224
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 2277090391 426 fVRELAKDLPIFYEKTVESIRYGVDGVIVYA----GGQGFRGDMV 466
Cdd:TIGR02734 225 -MAKLAEDLGGELRLNAEVIRIETEGGRATAvhlaDGERLDADAV 268
|
|
| GltD |
COG0493 |
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ... |
228-262 |
6.19e-07 |
|
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis
Pssm-ID: 440259 [Multi-domain] Cd Length: 434 Bit Score: 52.44 E-value: 6.19e-07
10 20 30
....*....|....*....|....*....|....*
gi 2277090391 228 VVVVGAGLAGLVAARQLMAMGFKVVVLEGRARPGG 262
Cdd:COG0493 124 VAVVGSGPAGLAAAYQLARAGHEVTVFEALDKPGG 158
|
|
| COG3573 |
COG3573 |
Predicted oxidoreductase [General function prediction only]; |
224-262 |
7.95e-07 |
|
Predicted oxidoreductase [General function prediction only];
Pssm-ID: 442794 [Multi-domain] Cd Length: 551 Bit Score: 52.49 E-value: 7.95e-07
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 2277090391 224 ERANVVVVGAGLAGLVAARQLMAMGFKVVVL--EGRARPGG 262
Cdd:COG3573 4 MDADVIVVGAGLAGLVAAAELADAGRRVLLLdqEPEANLGG 44
|
|
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
224-281 |
1.33e-06 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 51.09 E-value: 1.33e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 2277090391 224 ERANVVVVGAGLAGLVAARQLMAMGFKVVVLEGRARPGGRVKTMILKGEGVVAAADLG 281
Cdd:COG0654 2 MRTDVLIVGGGPAGLALALALARAGIRVTVVERAPPPRPDGRGIALSPRSLELLRRLG 59
|
|
| PRK07233 |
PRK07233 |
hypothetical protein; Provisional |
227-262 |
1.85e-06 |
|
hypothetical protein; Provisional
Pssm-ID: 235977 [Multi-domain] Cd Length: 434 Bit Score: 51.04 E-value: 1.85e-06
10 20 30
....*....|....*....|....*....|....*.
gi 2277090391 227 NVVVVGAGLAGLVAARQLMAMGFKVVVLEGRARPGG 262
Cdd:PRK07233 1 KIAIVGGGIAGLAAAYRLAKRGHEVTVFEADDQLGG 36
|
|
| PRK12834 |
PRK12834 |
putative FAD-binding dehydrogenase; Reviewed |
224-262 |
2.07e-06 |
|
putative FAD-binding dehydrogenase; Reviewed
Pssm-ID: 183782 [Multi-domain] Cd Length: 549 Bit Score: 51.05 E-value: 2.07e-06
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 2277090391 224 ERANVVVVGAGLAGLVAARQLMAMGFKVVVL--EGRARPGG 262
Cdd:PRK12834 3 MDADVIVVGAGLAGLVAAAELADAGKRVLLLdqENEANLGG 43
|
|
| AlaDh_PNT_C |
smart01002 |
Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase catalyzes the ... |
222-280 |
3.99e-06 |
|
Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine.
Pssm-ID: 214966 [Multi-domain] Cd Length: 149 Bit Score: 47.12 E-value: 3.99e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 222 GVERANVVVVGAGLAGLVAARQLMAMGFKVVVL--------EGRARPGGRVKTMILKG---EGVVAAADL 280
Cdd:smart01002 17 GVPPAKVVVIGAGVVGLGAAATAKGLGAEVTVLdvrparlrQLESLLGARFTTLYSQAellEEAVKEADL 86
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
224-262 |
4.66e-06 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 49.52 E-value: 4.66e-06
10 20 30
....*....|....*....|....*....|....*....
gi 2277090391 224 ERANVVVVGAGLAGLVAARQLMAMGFKVVVLEgRARPGG 262
Cdd:COG0665 1 ATADVVVIGGGIAGLSTAYHLARRGLDVTVLE-RGRPGS 38
|
|
| Ald |
COG0686 |
Alanine dehydrogenase (includes sporulation protein SpoVN) [Amino acid transport and ... |
222-285 |
5.64e-06 |
|
Alanine dehydrogenase (includes sporulation protein SpoVN) [Amino acid transport and metabolism]; Alanine dehydrogenase (includes sporulation protein SpoVN) is part of the Pathway/BioSystem: Urea cycle
Pssm-ID: 440450 [Multi-domain] Cd Length: 372 Bit Score: 49.24 E-value: 5.64e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2277090391 222 GVERANVVVVGAGLAGLVAARQLMAMGFKVVVLE---GRAR-----PGGRVKTMILKG---EGVVAAADLG-GSVL 285
Cdd:COG0686 165 GVPPAKVVILGGGVVGTNAARMALGLGADVTVLDinlDRLRrlddiFGGRVTTLYSNPaniEEALKEADLViGAVL 240
|
|
| PRK11749 |
PRK11749 |
dihydropyrimidine dehydrogenase subunit A; Provisional |
228-262 |
1.03e-05 |
|
dihydropyrimidine dehydrogenase subunit A; Provisional
Pssm-ID: 236967 [Multi-domain] Cd Length: 457 Bit Score: 48.64 E-value: 1.03e-05
10 20 30
....*....|....*....|....*....|....*
gi 2277090391 228 VVVVGAGLAGLVAARQLMAMGFKVVVLEGRARPGG 262
Cdd:PRK11749 143 VAVIGAGPAGLTAAHRLARKGYDVTIFEARDKAGG 177
|
|
| gltD |
PRK12810 |
glutamate synthase subunit beta; Reviewed |
228-275 |
1.23e-05 |
|
glutamate synthase subunit beta; Reviewed
Pssm-ID: 237213 [Multi-domain] Cd Length: 471 Bit Score: 48.62 E-value: 1.23e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2277090391 228 VVVVGAGLAGLVAARQLMAMGFKVVVLEGRARPGG------------------RVKtmILKGEGVV 275
Cdd:PRK12810 146 VAVVGSGPAGLAAADQLARAGHKVTVFERADRIGGllrygipdfklekevidrRIE--LMEAEGIE 209
|
|
| PLN02576 |
PLN02576 |
protoporphyrinogen oxidase |
226-267 |
1.39e-05 |
|
protoporphyrinogen oxidase
Pssm-ID: 215314 [Multi-domain] Cd Length: 496 Bit Score: 48.47 E-value: 1.39e-05
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 2277090391 226 ANVVVVGAGLAGLVAARQLMA-MGFKVVVLEGRARPGGRVKTM 267
Cdd:PLN02576 13 KDVAVVGAGVSGLAAAYALASkHGVNVLVTEARDRVGGNITSV 55
|
|
| L-AlaDH |
cd05305 |
Alanine dehydrogenase NAD-binding and catalytic domains; Alanine dehydrogenase (L-AlaDH) ... |
222-285 |
1.57e-05 |
|
Alanine dehydrogenase NAD-binding and catalytic domains; Alanine dehydrogenase (L-AlaDH) catalyzes the NAD-dependent conversion of pyruvate to L-alanine via reductive amination. Like formate dehydrogenase and related enzymes, L-AlaDH is comprised of 2 domains connected by a long alpha helical stretch, each resembling a Rossmann fold NAD-binding domain. The NAD-binding domain is inserted within the linear sequence of the more divergent catalytic domain. Ligand binding and active site residues are found in the cleft between the subdomains. L-AlaDH is typically hexameric and is critical in carbon and nitrogen metabolism in micro-organisms.
Pssm-ID: 240630 [Multi-domain] Cd Length: 359 Bit Score: 47.79 E-value: 1.57e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2277090391 222 GVERANVVVVGAGLAGLVAARQLMAMGFKVVVLE---GRARP-----GGRVKTMILKG---EGVVAAADLG-GSVL 285
Cdd:cd05305 165 GVPPAKVVILGAGVVGENAARVALGLGAEVTVLDinlERLRYlddifGGRVTTLYSNPanlEEALKEADLViGAVL 240
|
|
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
228-262 |
2.70e-05 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 47.52 E-value: 2.70e-05
10 20 30
....*....|....*....|....*....|....*
gi 2277090391 228 VVVVGAGLAGLVAARQLMAMGFKVVVLEGRARPGG 262
Cdd:COG1053 6 VVVVGSGGAGLRAALEAAEAGLKVLVLEKVPPRGG 40
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
228-262 |
4.24e-05 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 46.62 E-value: 4.24e-05
10 20 30
....*....|....*....|....*....|....*
gi 2277090391 228 VVVVGAGLAGLVAARQLMAMGFKVVVLEGRARPGG 262
Cdd:pfam01266 2 VVVIGGGIVGLSTAYELARRGLSVTLLERGDDPGS 36
|
|
| FixC |
COG0644 |
Dehydrogenase (flavoprotein) [Energy production and conversion]; |
233-361 |
5.70e-05 |
|
Dehydrogenase (flavoprotein) [Energy production and conversion];
Pssm-ID: 440409 [Multi-domain] Cd Length: 281 Bit Score: 45.73 E-value: 5.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 233 AGLAGLVAARQLMAMGFKVVVLEGRARPGGRVktmilKGEGVVAAA--DLGgsvltgingnPLGVLArQMGLPLHKVRdi 310
Cdd:COG0644 1 AGPAGSAAARRLARAGLSVLLLEKGSFPGDKI-----CGGGLLPRAleELE----------PLGLDE-PLERPVRGAR-- 62
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 2277090391 311 cpLYLPDGKAVdsEIDSRIEASFnkLLDRVcKLRQAMIEEVKS--VDVNLGTA 361
Cdd:COG0644 63 --FYSPGGKSV--ELPPGRGGGY--VVDRA-RFDRWLAEQAEEagAEVRTGTR 108
|
|
| HdrA |
COG1148 |
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion]; |
227-267 |
5.91e-05 |
|
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];
Pssm-ID: 440762 [Multi-domain] Cd Length: 563 Bit Score: 46.39 E-value: 5.91e-05
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 2277090391 227 NVVVVGAGLAGLVAARQLMAMGFKVVVLEGRARPGGRVKTM 267
Cdd:COG1148 142 RALVIGGGIAGMTAALELAEQGYEVYLVEKEPELGGRAAQL 182
|
|
| PRK13984 |
PRK13984 |
putative oxidoreductase; Provisional |
219-262 |
6.33e-05 |
|
putative oxidoreductase; Provisional
Pssm-ID: 172486 [Multi-domain] Cd Length: 604 Bit Score: 46.30 E-value: 6.33e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 2277090391 219 LNEGVERAN--VVVVGAGLAGLVAARQLMAMGFKVVVLEGRARPGG 262
Cdd:PRK13984 275 LDDEPEKKNkkVAIVGSGPAGLSAAYFLATMGYEVTVYESLSKPGG 320
|
|
| AlaDh_PNT_C |
pfam01262 |
Alanine dehydrogenase/PNT, C-terminal domain; This family now also contains the lysine ... |
222-257 |
1.05e-04 |
|
Alanine dehydrogenase/PNT, C-terminal domain; This family now also contains the lysine 2-oxoglutarate reductases.
Pssm-ID: 426165 [Multi-domain] Cd Length: 213 Bit Score: 44.41 E-value: 1.05e-04
10 20 30
....*....|....*....|....*....|....*.
gi 2277090391 222 GVERANVVVVGAGLAGLVAARQLMAMGFKVVVLEGR 257
Cdd:pfam01262 25 GVAPAKVLVIGGGVAGLNAAATAKGLGAIVTILDVR 60
|
|
| NirB |
COG1251 |
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion]; |
226-264 |
2.43e-04 |
|
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];
Pssm-ID: 440863 [Multi-domain] Cd Length: 402 Bit Score: 44.36 E-value: 2.43e-04
10 20 30
....*....|....*....|....*....|....*....
gi 2277090391 226 ANVVVVGAGLAGLVAARQLMAMGFKVVVLEGRARPGGRV 264
Cdd:COG1251 143 KRVVVIGGGLIGLEAAAALRKRGLEVTVVERAPRLLPRQ 181
|
|
| PRK07208 |
PRK07208 |
hypothetical protein; Provisional |
224-271 |
2.76e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 235967 [Multi-domain] Cd Length: 479 Bit Score: 44.11 E-value: 2.76e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 2277090391 224 ERANVVVVGAGLAGLVAARQLMAMGFKVVVLEGRARPGGRVKTMILKG 271
Cdd:PRK07208 3 NKKSVVIIGAGPAGLTAAYELLKRGYPVTVLEADPVVGGISRTVTYKG 50
|
|
| Thi4 |
pfam01946 |
Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme. |
226-262 |
4.21e-04 |
|
Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.
Pssm-ID: 460393 Cd Length: 232 Bit Score: 42.84 E-value: 4.21e-04
10 20 30
....*....|....*....|....*....|....*...
gi 2277090391 226 ANVVVVGAGLAGLVAARQLM-AMGFKVVVLEGRARPGG 262
Cdd:pfam01946 18 SDVVIVGAGSSGLTAAYYLAkNRGLKVAIIERSVSPGG 55
|
|
| GdhA |
COG0334 |
Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]; Glutamate ... |
206-252 |
4.55e-04 |
|
Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]; Glutamate dehydrogenase/leucine dehydrogenase is part of the Pathway/BioSystem: Glutamine biosynthesis
Pssm-ID: 440103 [Multi-domain] Cd Length: 411 Bit Score: 43.51 E-value: 4.55e-04
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 2277090391 206 FGVALSIKEAQLKLNEGVERANVVVVGAGLAGLVAARQLMAMGFKVV 252
Cdd:COG0334 189 RGVVYFAREALKKLGLSLEGKTVAVQGFGNVGSYAAELLHELGAKVV 235
|
|
| PRK12814 |
PRK12814 |
putative NADPH-dependent glutamate synthase small subunit; Provisional |
228-262 |
6.30e-04 |
|
putative NADPH-dependent glutamate synthase small subunit; Provisional
Pssm-ID: 139246 [Multi-domain] Cd Length: 652 Bit Score: 43.18 E-value: 6.30e-04
10 20 30
....*....|....*....|....*....|....*
gi 2277090391 228 VVVVGAGLAGLVAARQLMAMGFKVVVLEGRARPGG 262
Cdd:PRK12814 196 VAIIGAGPAGLTAAYYLLRKGHDVTIFDANEQAGG 230
|
|
| PLN02172 |
PLN02172 |
flavin-containing monooxygenase FMO GS-OX |
227-262 |
9.07e-04 |
|
flavin-containing monooxygenase FMO GS-OX
Pssm-ID: 215116 [Multi-domain] Cd Length: 461 Bit Score: 42.54 E-value: 9.07e-04
10 20 30
....*....|....*....|....*....|....*.
gi 2277090391 227 NVVVVGAGLAGLVAARQLMAMGFKVVVLEGRARPGG 262
Cdd:PLN02172 12 HVAVIGAGAAGLVAARELRREGHTVVVFEREKQVGG 47
|
|
| PRK12771 |
PRK12771 |
putative glutamate synthase (NADPH) small subunit; Provisional |
228-262 |
9.60e-04 |
|
putative glutamate synthase (NADPH) small subunit; Provisional
Pssm-ID: 237198 [Multi-domain] Cd Length: 564 Bit Score: 42.55 E-value: 9.60e-04
10 20 30
....*....|....*....|....*....|....*
gi 2277090391 228 VVVVGAGLAGLVAARQLMAMGFKVVVLEGRARPGG 262
Cdd:PRK12771 140 VAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGG 174
|
|
| PLN02612 |
PLN02612 |
phytoene desaturase |
227-264 |
1.18e-03 |
|
phytoene desaturase
Pssm-ID: 215330 [Multi-domain] Cd Length: 567 Bit Score: 42.14 E-value: 1.18e-03
10 20 30
....*....|....*....|....*....|....*...
gi 2277090391 227 NVVVVGAGLAGLVAARQLMAMGFKVVVLEGRARPGGRV 264
Cdd:PLN02612 95 KVVIAGAGLAGLSTAKYLADAGHKPILLEARDVLGGKV 132
|
|
| Pyr_redox_2 |
pfam07992 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
227-263 |
1.26e-03 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 400379 [Multi-domain] Cd Length: 301 Bit Score: 41.53 E-value: 1.26e-03
10 20 30
....*....|....*....|....*....|....*...
gi 2277090391 227 NVVVVGAGLAGLVAARQLMAMGFKVVVLE-GRARPGGR 263
Cdd:pfam07992 2 DVVVIGGGPAGLAAALTLAQLGGKVTLIEdEGTCPYGG 39
|
|
| PRK07804 |
PRK07804 |
L-aspartate oxidase; Provisional |
223-254 |
1.54e-03 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236102 [Multi-domain] Cd Length: 541 Bit Score: 41.88 E-value: 1.54e-03
10 20 30
....*....|....*....|....*....|..
gi 2277090391 223 VERANVVVVGAGLAGLVAARQLMAMGFKVVVL 254
Cdd:PRK07804 14 RDAADVVVVGSGVAGLTAALAARRAGRRVLVV 45
|
|
| PRK12831 |
PRK12831 |
putative oxidoreductase; Provisional |
228-262 |
2.09e-03 |
|
putative oxidoreductase; Provisional
Pssm-ID: 183780 [Multi-domain] Cd Length: 464 Bit Score: 41.54 E-value: 2.09e-03
10 20 30
....*....|....*....|....*....|....*
gi 2277090391 228 VVVVGAGLAGLVAARQLMAMGFKVVVLEGRARPGG 262
Cdd:PRK12831 143 VAVIGSGPAGLTCAGDLAKMGYDVTIFEALHEPGG 177
|
|
| PTZ00306 |
PTZ00306 |
NADH-dependent fumarate reductase; Provisional |
226-262 |
2.14e-03 |
|
NADH-dependent fumarate reductase; Provisional
Pssm-ID: 140327 [Multi-domain] Cd Length: 1167 Bit Score: 41.69 E-value: 2.14e-03
10 20 30
....*....|....*....|....*....|....*..
gi 2277090391 226 ANVVVVGAGLAGLVAARQLMAMGFKVVVLEGRARPGG 262
Cdd:PTZ00306 410 ARVIVVGGGLAGCSAAIEAASCGAQVILLEKEAKLGG 446
|
|
| MurD |
COG0771 |
UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell wall/membrane/envelope biogenesis]; ... |
227-303 |
2.17e-03 |
|
UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell wall/membrane/envelope biogenesis]; UDP-N-acetylmuramoylalanine-D-glutamate ligase is part of the Pathway/BioSystem: Mureine biosynthesis
Pssm-ID: 440534 [Multi-domain] Cd Length: 445 Bit Score: 41.22 E-value: 2.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 227 NVVVVGAGLAGLVAARQLMAMGFKVVVLEGRARPGGRVKTmiLKGEGV-VAAADLGGSVLTGIN------G----NPLGV 295
Cdd:COG0771 6 KVLVLGLGKSGLAAARLLAKLGAEVTVSDDRPAPELAAAE--LEAPGVeVVLGEHPEELLDGADlvvkspGippdHPLLK 83
|
....*...
gi 2277090391 296 LARQMGLP 303
Cdd:COG0771 84 AARAAGIP 91
|
|
| PLN02487 |
PLN02487 |
zeta-carotene desaturase |
224-264 |
2.60e-03 |
|
zeta-carotene desaturase
Pssm-ID: 215268 [Multi-domain] Cd Length: 569 Bit Score: 41.32 E-value: 2.60e-03
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 2277090391 224 ERANVVVVGAGLAGLVAARQLMAMGFKVVVLEGRARPGGRV 264
Cdd:PLN02487 74 PKLKVAIIGAGLAGMSTAVELLDQGHEVDIYESRPFIGGKV 114
|
|
| Lpd |
COG1249 |
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ... |
228-262 |
3.17e-03 |
|
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation
Pssm-ID: 440861 [Multi-domain] Cd Length: 456 Bit Score: 40.84 E-value: 3.17e-03
10 20 30
....*....|....*....|....*....|....*
gi 2277090391 228 VVVVGAGLAGLVAARQLMAMGFKVVVLEgRARPGG 262
Cdd:COG1249 6 LVVIGAGPGGYVAAIRAAQLGLKVALVE-KGRLGG 39
|
|
| PRK06370 |
PRK06370 |
FAD-containing oxidoreductase; |
224-262 |
3.63e-03 |
|
FAD-containing oxidoreductase;
Pssm-ID: 235787 [Multi-domain] Cd Length: 463 Bit Score: 40.57 E-value: 3.63e-03
10 20 30
....*....|....*....|....*....|....*....
gi 2277090391 224 ERANVVVVGAGLAGLVAARQLMAMGFKVVVLEgRARPGG 262
Cdd:PRK06370 4 QRYDAIVIGAGQAGPPLAARAAGLGMKVALIE-RGLLGG 41
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
228-262 |
3.94e-03 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 40.35 E-value: 3.94e-03
10 20 30
....*....|....*....|....*....|....*
gi 2277090391 228 VVVVGAGLAGLVAARQLMAMGFKVVVLEGRARPGG 262
Cdd:pfam00890 2 VLVIGGGLAGLAAALAAAEAGLKVAVVEKGQPFGG 36
|
|
| mnmC |
PRK01747 |
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent ... |
228-261 |
3.97e-03 |
|
bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;
Pssm-ID: 234978 [Multi-domain] Cd Length: 662 Bit Score: 40.60 E-value: 3.97e-03
10 20 30
....*....|....*....|....*....|....
gi 2277090391 228 VVVVGAGLAGLVAARQLMAMGFKVVVLEGRARPG 261
Cdd:PRK01747 263 AAIIGGGIAGAALALALARRGWQVTLYEADEAPA 296
|
|
| PRK07843 |
PRK07843 |
3-oxosteroid 1-dehydrogenase; |
227-290 |
4.75e-03 |
|
3-oxosteroid 1-dehydrogenase;
Pssm-ID: 236111 [Multi-domain] Cd Length: 557 Bit Score: 40.40 E-value: 4.75e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2277090391 227 NVVVVGAGLAGLVAARQLMAMGFKVVVLE-------GRARPGGRV---KTMILKGEGVVAAADLGGSVLTGING 290
Cdd:PRK07843 9 DVVVVGSGAAGMVAALTAAHRGLSTVVVEkaphyggSTARSGGGVwipNNEVLKRAGVPDTPEAARTYLHSIVG 82
|
|
| PRK06292 |
PRK06292 |
dihydrolipoamide dehydrogenase; Validated |
228-262 |
5.15e-03 |
|
dihydrolipoamide dehydrogenase; Validated
Pssm-ID: 235774 [Multi-domain] Cd Length: 460 Bit Score: 40.16 E-value: 5.15e-03
10 20 30
....*....|....*....|....*....|....*
gi 2277090391 228 VVVVGAGLAGLVAARQLMAMGFKVVVLEGrARPGG 262
Cdd:PRK06292 6 VIVIGAGPAGYVAARRAAKLGKKVALIEK-GPLGG 39
|
|
| FadH2 |
COG0446 |
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ... |
205-264 |
5.45e-03 |
|
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];
Pssm-ID: 440215 [Multi-domain] Cd Length: 322 Bit Score: 39.79 E-value: 5.45e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2277090391 205 NFGVALSIKEAqLKLNEGverANVVVVGAGLAGLVAARQLMAMGFKVVVLEGRARPGGRV 264
Cdd:COG0446 108 TLDDADALREA-LKEFKG---KRAVVIGGGPIGLELAEALRKRGLKVTLVERAPRLLGVL 163
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| TrxB |
COG0492 |
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]; |
228-267 |
5.98e-03 |
|
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440258 [Multi-domain] Cd Length: 305 Bit Score: 39.72 E-value: 5.98e-03
10 20 30 40
....*....|....*....|....*....|....*....|
gi 2277090391 228 VVVVGAGLAGLVAARQLMAMGFKVVVLEGRArPGGRVKTM 267
Cdd:COG0492 3 VVIIGAGPAGLTAAIYAARAGLKTLVIEGGE-PGGQLATT 41
|
|
| PRK11883 |
PRK11883 |
protoporphyrinogen oxidase; Reviewed |
228-271 |
6.41e-03 |
|
protoporphyrinogen oxidase; Reviewed
Pssm-ID: 237009 [Multi-domain] Cd Length: 451 Bit Score: 39.83 E-value: 6.41e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 2277090391 228 VVVVGAGLAGLVAARQL--MAMGFKVVVLEGRARPGGRVKTMILKG 271
Cdd:PRK11883 3 VAIIGGGITGLSAAYRLhkKGPDADITLLEASDRLGGKIQTVRKDG 48
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| NAD_bind_1_Glu_DH |
cd01076 |
NAD(P) binding domain of glutamate dehydrogenase, subgroup 1; Amino acid dehydrogenase (DH) is ... |
206-252 |
7.77e-03 |
|
NAD(P) binding domain of glutamate dehydrogenase, subgroup 1; Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha -beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts.
Pssm-ID: 133445 [Multi-domain] Cd Length: 227 Bit Score: 38.67 E-value: 7.77e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 2277090391 206 FGVALSIKEAQLKLNEGVERANVVVVGAGLAGLVAARQLMAMGFKVV 252
Cdd:cd01076 12 RGVAYATREALKKLGIGLAGARVAIQGFGNVGSHAARFLHEAGAKVV 58
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|
| mhpA |
PRK06183 |
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase; |
220-260 |
8.63e-03 |
|
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
Pssm-ID: 235727 [Multi-domain] Cd Length: 500 Bit Score: 39.50 E-value: 8.63e-03
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 2277090391 220 NEGVERANVVVVGAGLAGLVAARQLMAMGFKVVVLEGRARP 260
Cdd:PRK06183 5 HPDAHDTDVVIVGAGPVGLTLANLLGQYGVRVLVLERWPTL 45
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|
| YhiN |
COG2081 |
Predicted flavoprotein YhiN [General function prediction only]; |
229-261 |
8.65e-03 |
|
Predicted flavoprotein YhiN [General function prediction only];
Pssm-ID: 441684 [Multi-domain] Cd Length: 402 Bit Score: 39.26 E-value: 8.65e-03
10 20 30
....*....|....*....|....*....|...
gi 2277090391 229 VVVGAGLAGLVAARQLMAMGFKVVVLEGRARPG 261
Cdd:COG2081 1 IVIGAGAAGLMAAITAAERGARVLLLEKNPKVG 33
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