glycosyl hydrolase 108 family protein [Acinetobacter sp. 1592897]
glycoside hydrolase family 108 protein( domain architecture ID 11467621)
glycoside hydrolase family 108 protein may function as a lysozyme (N-acetylmuramidase), catalyzing the hydrolysis of (1->4)-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins
List of domain hits
Name | Accession | Description | Interval | E-value | ||||
ZliS | COG3926 | Lysozyme family protein [General function prediction only]; |
3-181 | 5.45e-57 | ||||
Lysozyme family protein [General function prediction only]; : Pssm-ID: 443130 [Multi-domain] Cd Length: 167 Bit Score: 176.59 E-value: 5.45e-57
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Name | Accession | Description | Interval | E-value | ||||
ZliS | COG3926 | Lysozyme family protein [General function prediction only]; |
3-181 | 5.45e-57 | ||||
Lysozyme family protein [General function prediction only]; Pssm-ID: 443130 [Multi-domain] Cd Length: 167 Bit Score: 176.59 E-value: 5.45e-57
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N-acetylmuramidase_GH108 | cd13926 | N-acetylmuramidase domain of the glycosyl hydrolase 108 family; This domain acts as a lysozyme ... |
1-90 | 9.39e-34 | ||||
N-acetylmuramidase domain of the glycosyl hydrolase 108 family; This domain acts as a lysozyme (N-acetylmuramidase), EC:3.2.1.17. It contains a conserved EGGY motif near the N-terminus, the glutamic acid within this motif is essential for catalytic activity. In bacteria, it may activate the secretion of large proteins via the breaking and rearrangement of the peptidoglycan layer during secretion. It is frequently found at the N-terminus of proteins containing a peptidoglycan binding domain. Pssm-ID: 381608 Cd Length: 91 Bit Score: 114.95 E-value: 9.39e-34
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Glyco_hydro_108 | pfam05838 | Glycosyl hydrolase 108; This family acts as a lysozyme (N-acetylmuramidase), EC:3.2.1.17. It ... |
7-90 | 3.73e-30 | ||||
Glycosyl hydrolase 108; This family acts as a lysozyme (N-acetylmuramidase), EC:3.2.1.17. It contains a conserved EGGY motif near the N-terminus, the glutamic acid within this motif is essential for catalytic activity. In bacteria, it may activate the secretion of large proteins via the breaking and rearrangement of the peptidoglycan layer during secretion. It is frequently found at the N-terminus of proteins containing a C-terminal pfam09374 domain. Pssm-ID: 428646 Cd Length: 86 Bit Score: 105.73 E-value: 3.73e-30
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Name | Accession | Description | Interval | E-value | ||||
ZliS | COG3926 | Lysozyme family protein [General function prediction only]; |
3-181 | 5.45e-57 | ||||
Lysozyme family protein [General function prediction only]; Pssm-ID: 443130 [Multi-domain] Cd Length: 167 Bit Score: 176.59 E-value: 5.45e-57
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N-acetylmuramidase_GH108 | cd13926 | N-acetylmuramidase domain of the glycosyl hydrolase 108 family; This domain acts as a lysozyme ... |
1-90 | 9.39e-34 | ||||
N-acetylmuramidase domain of the glycosyl hydrolase 108 family; This domain acts as a lysozyme (N-acetylmuramidase), EC:3.2.1.17. It contains a conserved EGGY motif near the N-terminus, the glutamic acid within this motif is essential for catalytic activity. In bacteria, it may activate the secretion of large proteins via the breaking and rearrangement of the peptidoglycan layer during secretion. It is frequently found at the N-terminus of proteins containing a peptidoglycan binding domain. Pssm-ID: 381608 Cd Length: 91 Bit Score: 114.95 E-value: 9.39e-34
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Glyco_hydro_108 | pfam05838 | Glycosyl hydrolase 108; This family acts as a lysozyme (N-acetylmuramidase), EC:3.2.1.17. It ... |
7-90 | 3.73e-30 | ||||
Glycosyl hydrolase 108; This family acts as a lysozyme (N-acetylmuramidase), EC:3.2.1.17. It contains a conserved EGGY motif near the N-terminus, the glutamic acid within this motif is essential for catalytic activity. In bacteria, it may activate the secretion of large proteins via the breaking and rearrangement of the peptidoglycan layer during secretion. It is frequently found at the N-terminus of proteins containing a C-terminal pfam09374 domain. Pssm-ID: 428646 Cd Length: 86 Bit Score: 105.73 E-value: 3.73e-30
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PG_binding_3 | pfam09374 | Predicted Peptidoglycan domain; This family contains a potential peptidoglycan binding domain. |
98-179 | 5.51e-12 | ||||
Predicted Peptidoglycan domain; This family contains a potential peptidoglycan binding domain. Pssm-ID: 401356 Cd Length: 76 Bit Score: 58.67 E-value: 5.51e-12
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Blast search parameters | ||||
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