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Conserved domains on  [gi|459495030|gb|EMG88304|]
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glycosyltransferase, group 2 family protein [Helicobacter pylori GAM114Ai]

Protein Classification

glycosyltransferase family 2 protein( domain architecture ID 10157685)

glycosyltransferase family 2 protein catalyzes the transfer of saccharide moieties from a donor to an acceptor to form glycosidic bonds

CAZY:  GT2
EC:  2.4.-.-
Gene Ontology:  GO:0016757
SCOP:  3000077

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
GT_2_WfgS_like cd06433
WfgS and WfeV are involved in O-antigen biosynthesis; Escherichia coli WfgS and Shigella ...
2-203 3.65e-93

WfgS and WfeV are involved in O-antigen biosynthesis; Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


:

Pssm-ID: 133055 [Multi-domain]  Cd Length: 202  Bit Score: 272.50  E-value: 3.65e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030   2 ITACFNSEKTIEDTILSVLHQTYKNIEYIIIDGASADSTLGIIQKYKDQIACVVSEKDKGIYDAMNKGIKRASGDIIALL 81
Cdd:cd06433    3 ITPTYNQAETLEETIDSVLSQTYPNIEYIVIDGGSTDGTVDIIKKYEDKITYWISEPDKGIYDAMNKGIALATGDIIGFL 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030  82 NSDDFYIDEFVIEKVVHEFEKKHCDSVYADLVFVKPNRLEKVVRYYESgeFSPKTLLYGVVPAHPTLFVKKAIHERYGLY 161
Cdd:cd06433   83 NSDDTLLPGALLAVVAAFAEHPEVDVVYGDVLLVDENGRVIGRRRPPP--FLDKFLLYGMPICHQATFFRRSLFEKYGGF 160
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 459495030 162 KTDYKISADFEMIIRLFVVQKIsFSYLKEVLVVMRTGGVSAS 203
Cdd:cd06433  161 DESYRIAADYDLLLRLLLAGKI-FKYLPEVLAAFRLGGVSST 201
 
Name Accession Description Interval E-value
GT_2_WfgS_like cd06433
WfgS and WfeV are involved in O-antigen biosynthesis; Escherichia coli WfgS and Shigella ...
2-203 3.65e-93

WfgS and WfeV are involved in O-antigen biosynthesis; Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133055 [Multi-domain]  Cd Length: 202  Bit Score: 272.50  E-value: 3.65e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030   2 ITACFNSEKTIEDTILSVLHQTYKNIEYIIIDGASADSTLGIIQKYKDQIACVVSEKDKGIYDAMNKGIKRASGDIIALL 81
Cdd:cd06433    3 ITPTYNQAETLEETIDSVLSQTYPNIEYIVIDGGSTDGTVDIIKKYEDKITYWISEPDKGIYDAMNKGIALATGDIIGFL 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030  82 NSDDFYIDEFVIEKVVHEFEKKHCDSVYADLVFVKPNRLEKVVRYYESgeFSPKTLLYGVVPAHPTLFVKKAIHERYGLY 161
Cdd:cd06433   83 NSDDTLLPGALLAVVAAFAEHPEVDVVYGDVLLVDENGRVIGRRRPPP--FLDKFLLYGMPICHQATFFRRSLFEKYGGF 160
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 459495030 162 KTDYKISADFEMIIRLFVVQKIsFSYLKEVLVVMRTGGVSAS 203
Cdd:cd06433  161 DESYRIAADYDLLLRLLLAGKI-FKYLPEVLAAFRLGGVSST 201
WcaA COG0463
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; ...
2-210 3.13e-28

Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440231 [Multi-domain]  Cd Length: 208  Bit Score: 106.71  E-value: 3.13e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030   2 ITACFNSEKTIEDTILSVLHQTYKNIEYIIIDGASADSTLGIIQKYKDQ---IACVVSEKDKGIYDAMNKGIKRASGDII 78
Cdd:COG0463    7 VIPTYNEEEYLEEALESLLAQTYPDFEIIVVDDGSTDGTAEILRELAAKdprIRVIRLERNRGKGAARNAGLAAARGDYI 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030  79 ALLNSDDFYIDEFvIEKVVHEFEKKHCDSVYADLVFvkpNRLEKVVRYYESGEFSPKTLLYGVVPAHPTL-FVKKAIHER 157
Cdd:COG0463   87 AFLDADDQLDPEK-LEELVAALEEGPADLVYGSRLI---REGESDLRRLGSRLFNLVRLLTNLPDSTSGFrLFRREVLEE 162
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 459495030 158 YGLyktDYKISADFEMIIRLFVVQKIsfsylKEVLVVMRTGGVSASGFKSLLL 210
Cdd:COG0463  163 LGF---DEGFLEDTELLRALRHGFRI-----AEVPVRYRAGESKLNLRDLLRL 207
Glycos_transf_2 pfam00535
Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, ...
2-143 5.53e-26

Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.


Pssm-ID: 425738 [Multi-domain]  Cd Length: 166  Bit Score: 99.78  E-value: 5.53e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030    2 ITACFNSEKTIEDTILSVLHQTYKNIEYIIIDGASADSTLGIIQKYKDQ---IACVVSEKDKGIYDAMNKGIKRASGDII 78
Cdd:pfam00535   3 IIPTYNEEKYLLETLESLLNQTYPNFEIIVVDDGSTDGTVEIAEEYAKKdprVRVIRLPENRGKAGARNAGLRAATGDYI 82
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 459495030   79 ALLNSDDFYIDEFvIEKVVHEFEKKHCDSVYADLVFVKPNRLEKVVRYYESGEFSPKTLLYGVVP 143
Cdd:pfam00535  83 AFLDADDEVPPDW-LEKLVEALEEDGADVVVGSRYVIFGETGEYRRASRITLSRLPFFLGLRLLG 146
PRK10073 PRK10073
putative glycosyl transferase; Provisional
2-85 7.37e-08

putative glycosyl transferase; Provisional


Pssm-ID: 182223 [Multi-domain]  Cd Length: 328  Bit Score: 52.36  E-value: 7.37e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030   2 ITACFNSEKTIEDTILSVLHQTYKNIEYIIIDGASADSTLGIIQKYKDQIA--CVVSEKDKGIYDAMNKGIKRASGDIIA 79
Cdd:PRK10073  11 IIPLYNAGKDFRAFMESLIAQTWTALEIIIVNDGSTDNSVEIAKHYAENYPhvRLLHQANAGVSVARNTGLAVATGKYVA 90

                 ....*.
gi 459495030  80 LLNSDD 85
Cdd:PRK10073  91 FPDADD 96
 
Name Accession Description Interval E-value
GT_2_WfgS_like cd06433
WfgS and WfeV are involved in O-antigen biosynthesis; Escherichia coli WfgS and Shigella ...
2-203 3.65e-93

WfgS and WfeV are involved in O-antigen biosynthesis; Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133055 [Multi-domain]  Cd Length: 202  Bit Score: 272.50  E-value: 3.65e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030   2 ITACFNSEKTIEDTILSVLHQTYKNIEYIIIDGASADSTLGIIQKYKDQIACVVSEKDKGIYDAMNKGIKRASGDIIALL 81
Cdd:cd06433    3 ITPTYNQAETLEETIDSVLSQTYPNIEYIVIDGGSTDGTVDIIKKYEDKITYWISEPDKGIYDAMNKGIALATGDIIGFL 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030  82 NSDDFYIDEFVIEKVVHEFEKKHCDSVYADLVFVKPNRLEKVVRYYESgeFSPKTLLYGVVPAHPTLFVKKAIHERYGLY 161
Cdd:cd06433   83 NSDDTLLPGALLAVVAAFAEHPEVDVVYGDVLLVDENGRVIGRRRPPP--FLDKFLLYGMPICHQATFFRRSLFEKYGGF 160
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 459495030 162 KTDYKISADFEMIIRLFVVQKIsFSYLKEVLVVMRTGGVSAS 203
Cdd:cd06433  161 DESYRIAADYDLLLRLLLAGKI-FKYLPEVLAAFRLGGVSST 201
WcaA COG0463
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; ...
2-210 3.13e-28

Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440231 [Multi-domain]  Cd Length: 208  Bit Score: 106.71  E-value: 3.13e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030   2 ITACFNSEKTIEDTILSVLHQTYKNIEYIIIDGASADSTLGIIQKYKDQ---IACVVSEKDKGIYDAMNKGIKRASGDII 78
Cdd:COG0463    7 VIPTYNEEEYLEEALESLLAQTYPDFEIIVVDDGSTDGTAEILRELAAKdprIRVIRLERNRGKGAARNAGLAAARGDYI 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030  79 ALLNSDDFYIDEFvIEKVVHEFEKKHCDSVYADLVFvkpNRLEKVVRYYESGEFSPKTLLYGVVPAHPTL-FVKKAIHER 157
Cdd:COG0463   87 AFLDADDQLDPEK-LEELVAALEEGPADLVYGSRLI---REGESDLRRLGSRLFNLVRLLTNLPDSTSGFrLFRREVLEE 162
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 459495030 158 YGLyktDYKISADFEMIIRLFVVQKIsfsylKEVLVVMRTGGVSASGFKSLLL 210
Cdd:COG0463  163 LGF---DEGFLEDTELLRALRHGFRI-----AEVPVRYRAGESKLNLRDLLRL 207
Glyco_tranf_GTA_type cd00761
Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a ...
2-132 7.50e-27

Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold; Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.


Pssm-ID: 132997 [Multi-domain]  Cd Length: 156  Bit Score: 101.81  E-value: 7.50e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030   2 ITACFNSEKTIEDTILSVLHQTYKNIEYIIIDGASADSTLGIIQKYKDQ---IACVVSEKDKGIYDAMNKGIKRASGDII 78
Cdd:cd00761    2 IIPAYNEEPYLERCLESLLAQTYPNFEVIVVDDGSTDGTLEILEEYAKKdprVIRVINEENQGLAAARNAGLKAARGEYI 81
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 459495030  79 ALLNSDDFYIDEFVIEKVVHEFEKKHCDSVYAD-LVFVKPNRLEKVVRYYESGEF 132
Cdd:cd00761   82 LFLDADDLLLPDWLERLVAELLADPEADAVGGPgNLLFRRELLEEIGGFDEALLS 136
Glycos_transf_2 pfam00535
Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, ...
2-143 5.53e-26

Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.


Pssm-ID: 425738 [Multi-domain]  Cd Length: 166  Bit Score: 99.78  E-value: 5.53e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030    2 ITACFNSEKTIEDTILSVLHQTYKNIEYIIIDGASADSTLGIIQKYKDQ---IACVVSEKDKGIYDAMNKGIKRASGDII 78
Cdd:pfam00535   3 IIPTYNEEKYLLETLESLLNQTYPNFEIIVVDDGSTDGTVEIAEEYAKKdprVRVIRLPENRGKAGARNAGLRAATGDYI 82
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 459495030   79 ALLNSDDFYIDEFvIEKVVHEFEKKHCDSVYADLVFVKPNRLEKVVRYYESGEFSPKTLLYGVVP 143
Cdd:pfam00535  83 AFLDADDEVPPDW-LEKLVEALEEDGADVVVGSRYVIFGETGEYRRASRITLSRLPFFLGLRLLG 146
Succinoglycan_BP_ExoA cd02525
ExoA is involved in the biosynthesis of succinoglycan; Succinoglycan Biosynthesis Protein ExoA ...
2-177 2.03e-19

ExoA is involved in the biosynthesis of succinoglycan; Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.


Pssm-ID: 133016 [Multi-domain]  Cd Length: 249  Bit Score: 84.21  E-value: 2.03e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030   2 ITACFNSEKTIEDTILSVLHQTY--KNIEYIIIDGASADSTLGIIQKY--KDQIACVVSEKDKGIYDAMNKGIKRASGDI 77
Cdd:cd02525    5 IIPVRNEEKYIEELLESLLNQSYpkDLIEIIVVDGGSTDGTREIVQEYaaKDPRIRLIDNPKRIQSAGLNIGIRNSRGDI 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030  78 IALLNSDDFYIDEFvIEKVVHEFEKKHCDSVYADLVFVKPNRLEKVVRYYESGEFSPKTLLY-------GVVPAHPTLFV 150
Cdd:cd02525   85 IIRVDAHAVYPKDY-ILELVEALKRTGADNVGGPMETIGESKFQKAIAVAQSSPLGSGGSAYrggavkiGYVDTVHHGAY 163
                        170       180
                 ....*....|....*....|....*..
gi 459495030 151 KKAIHERYGLYKTDYKISADFEMIIRL 177
Cdd:cd02525  164 RREVFEKVGGFDESLVRNEDAELNYRL 190
BcsA COG1215
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1, ...
2-106 3.55e-17

Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility];


Pssm-ID: 440828 [Multi-domain]  Cd Length: 303  Bit Score: 79.02  E-value: 3.55e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030   2 ITACFNSEKTIEDTILSVLHQTY--KNIEYIIIDGASADSTLGIIQKYKDQ---IACVVSEKDKGIYDAMNKGIKRASGD 76
Cdd:COG1215   34 IIPAYNEEAVIEETLRSLLAQDYpkEKLEVIVVDDGSTDETAEIARELAAEyprVRVIERPENGGKAAALNAGLKAARGD 113
                         90       100       110
                 ....*....|....*....|....*....|
gi 459495030  77 IIALLNSDDfYIDEFVIEKVVHEFEKKHCD 106
Cdd:COG1215  114 IVVFLDADT-VLDPDWLRRLVAAFADPGVG 142
WcaE COG1216
Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism];
2-92 2.56e-16

Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism];


Pssm-ID: 440829 [Multi-domain]  Cd Length: 202  Bit Score: 75.03  E-value: 2.56e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030   2 ITACFNSEKTIEDTILSVLHQTYKNIEYIIIDGASADSTLGIIQKYK-DQIACVVSEKDKGIYDAMNKGIKRASGDIIAL 80
Cdd:COG1216    8 VIPTYNRPELLRRCLESLLAQTYPPFEVIVVDNGSTDGTAELLAALAfPRVRVIRNPENLGFAAARNLGLRAAGGDYLLF 87
                         90
                 ....*....|..
gi 459495030  81 LNSDDFYIDEFV 92
Cdd:COG1216   88 LDDDTVVEPDWL 99
GT2_RfbC_Mx_like cd04184
Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis; The rfbC gene ...
2-177 4.16e-16

Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis; The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.


Pssm-ID: 133027 [Multi-domain]  Cd Length: 202  Bit Score: 74.55  E-value: 4.16e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030   2 ITACFNS-EKTIEDTILSVLHQTYKNIEYIIIDGAS-ADSTLGIIQKYKDQ---IACVVSEKDKGIYDAMNKGIKRASGD 76
Cdd:cd04184    6 VMPVYNTpEKYLREAIESVRAQTYPNWELCIADDAStDPEVKRVLKKYAAQdprIKVVFREENGGISAATNSALELATGE 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030  77 IIALLNSDDfYIDEFVIEKVVHEF-EKKHCDSVYAD-----------LVFVKPnrlekvvryyesgEFSPKTLLYGVVPA 144
Cdd:cd04184   86 FVALLDHDD-ELAPHALYEVVKALnEHPDADLIYSDedkideggkrsEPFFKP-------------DWSPDLLLSQNYIG 151
                        170       180       190
                 ....*....|....*....|....*....|...
gi 459495030 145 HPTLFvKKAIHERYGLYKTDYKISADFEMIIRL 177
Cdd:cd04184  152 HLLVY-RRSLVRQVGGFREGFEGAQDYDLVLRV 183
CESA_like cd06423
CESA_like is the cellulose synthase superfamily; The cellulose synthase (CESA) superfamily ...
2-103 2.86e-12

CESA_like is the cellulose synthase superfamily; The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the elongation of beta-1,2 polyglucose chains of Glucan.


Pssm-ID: 133045 [Multi-domain]  Cd Length: 180  Bit Score: 63.40  E-value: 2.86e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030   2 ITACFNSEKTIEDTILSVLHQTYKNIEYIIIDGASADSTLGIIQKYKDQIAC----VVSEKDKGIYDAMNKGIKRASGDI 77
Cdd:cd06423    2 IVPAYNEEAVIERTIESLLALDYPKLEVIVVDDGSTDDTLEILEELAALYIRrvlvVRDKENGGKAGALNAGLRHAKGDI 81
                         90       100
                 ....*....|....*....|....*.
gi 459495030  78 IALLNSdDFYIDEFVIEKVVHEFEKK 103
Cdd:cd06423   82 VVVLDA-DTILEPDALKRLVVPFFAD 106
GT_2_like_d cd04196
Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse ...
4-154 1.29e-11

Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133039 [Multi-domain]  Cd Length: 214  Bit Score: 62.26  E-value: 1.29e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030   4 ACFNSEKTIEDTILSVLHQTYKNIEYIIIDGASADSTLGIIQKYKDQ----IACVVSEKDKGIYDAMNKGIKRASGDIIA 79
Cdd:cd04196    5 ATYNGEKYLREQLDSILAQTYKNDELIISDDGSTDGTVEIIKEYIDKdpfiIILIRNGKNLGVARNFESLLQAADGDYVF 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030  80 LLNSDDFYIDEfVIEKVVHEFEKKH-CDSVYADLVFVKPNRLEKVVRYYESGEFSPKT-----LLYGVVPAHPTLFVKKA 153
Cdd:cd04196   85 FCDQDDIWLPD-KLERLLKAFLKDDkPLLVYSDLELVDENGNPIGESFFEYQKIKPGTsfnnlLFQNVVTGCTMAFNREL 163

                 .
gi 459495030 154 I 154
Cdd:cd04196  164 L 164
DPM_DPG-synthase_like cd04179
DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily; DPM1 is the ...
2-110 4.07e-11

DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily.


Pssm-ID: 133022 [Multi-domain]  Cd Length: 185  Bit Score: 60.28  E-value: 4.07e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030   2 ITACFNSEKTIEDT---ILSVLHQTYkNIEYIIIDGASADSTLGIIQKYKDQ---IACVVSEKDKGIYDAMNKGIKRASG 75
Cdd:cd04179    2 VIPAYNEEENIPELverLLAVLEEGY-DYEIIVVDDGSTDGTAEIARELAARvprVRVIRLSRNFGKGAAVRAGFKAARG 80
                         90       100       110
                 ....*....|....*....|....*....|....*
gi 459495030  76 DIIALLNSDDFYiDEFVIEKVVHEFEKKHCDSVYA 110
Cdd:cd04179   81 DIVVTMDADLQH-PPEDIPKLLEKLLEGGADVVIG 114
GT_2_like_c cd04186
Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse ...
6-84 6.99e-11

Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133029 [Multi-domain]  Cd Length: 166  Bit Score: 59.11  E-value: 6.99e-11
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 459495030   6 FNSEKTIEDTILSVLHQTYKNIEYIIIDGASADSTLGIIQKYKDQIACVVSEKDKGIYDAMNKGIKRASGDIIALLNSD 84
Cdd:cd04186    6 YNSLEYLKACLDSLLAQTYPDFEVIVVDNASTDGSVELLRELFPEVRLIRNGENLGFGAGNNQGIREAKGDYVLLLNPD 84
CESA_like_1 cd06439
CESA_like_1 is a member of the cellulose synthase (CESA) superfamily; This is a subfamily of ...
1-156 4.14e-10

CESA_like_1 is a member of the cellulose synthase (CESA) superfamily; This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.


Pssm-ID: 133061 [Multi-domain]  Cd Length: 251  Bit Score: 58.36  E-value: 4.14e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030   1 MITACFNSEKTIEDTILSVLHQTYKN--IEYIIIDGASADSTLGIIQKYKDQIACVVSEKD-KGIYDAMNKGIKRASGDI 77
Cdd:cd06439   33 IIIPAYNEEAVIEAKLENLLALDYPRdrLEIIVVSDGSTDGTAEIAREYADKGVKLLRFPErRGKAAALNRALALATGEI 112
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030  78 IALlnSD-DFYIDEFVIEKVVHEFEKKHCDSVYADLVFVKPN----------RLEKVVRYYESgefspktLLYGVVPAHP 146
Cdd:cd06439  113 VVF--TDaNALLDPDALRLLVRHFADPSVGAVSGELVIVDGGgsgsgeglywKYENWLKRAES-------RLGSTVGANG 183
                        170
                 ....*....|.
gi 459495030 147 TLF-VKKAIHE 156
Cdd:cd06439  184 AIYaIRRELFR 194
GT_2_like_a cd02522
GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function; ...
6-177 9.84e-09

GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function; Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133013 [Multi-domain]  Cd Length: 221  Bit Score: 54.11  E-value: 9.84e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030   6 FNSEKTIEDTILSVLHQTYKNIEYIIIDGASADSTLGIIQKYKDQIacVVSEKDKGIydAMNKGIKRASGDIIALLNSDD 85
Cdd:cd02522    8 LNEAENLPRLLASLRRLNPLPLEIIVVDGGSTDGTVAIARSAGVVV--ISSPKGRAR--QMNAGAAAARGDWLLFLHADT 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030  86 FYIDEFvIEKVVHEFEKKHCDSVYADLVFVKPNRLEKVVryyesgEFSPKT------LLYGvvpaHPTLFVKKAIHERYG 159
Cdd:cd02522   84 RLPPDW-DAAIIETLRADGAVAGAFRLRFDDPGPRLRLL------ELGANLrsrlfgLPYG----DQGLFIRRELFEELG 152
                        170
                 ....*....|....*...
gi 459495030 160 LYKTDYkISADFEMIIRL 177
Cdd:cd02522  153 GFPELP-LMEDVELVRRL 169
PRK10073 PRK10073
putative glycosyl transferase; Provisional
2-85 7.37e-08

putative glycosyl transferase; Provisional


Pssm-ID: 182223 [Multi-domain]  Cd Length: 328  Bit Score: 52.36  E-value: 7.37e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030   2 ITACFNSEKTIEDTILSVLHQTYKNIEYIIIDGASADSTLGIIQKYKDQIA--CVVSEKDKGIYDAMNKGIKRASGDIIA 79
Cdd:PRK10073  11 IIPLYNAGKDFRAFMESLIAQTWTALEIIIVNDGSTDNSVEIAKHYAENYPhvRLLHQANAGVSVARNTGLAVATGKYVA 90

                 ....*.
gi 459495030  80 LLNSDD 85
Cdd:PRK10073  91 FPDADD 96
DPM1_like_bac cd04187
Bacterial DPM1_like enzymes are related to eukaryotic DPM1; A family of bacterial enzymes ...
2-125 1.57e-07

Bacterial DPM1_like enzymes are related to eukaryotic DPM1; A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.


Pssm-ID: 133030 [Multi-domain]  Cd Length: 181  Bit Score: 50.17  E-value: 1.57e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030   2 ITACFNSEKTIEDT---ILSVLHQTYKNIEYIIIDGASADSTLGIIQKYKDQIACVvsekdKGI--------YDAMNKGI 70
Cdd:cd04187    2 VVPVYNEEENLPELyerLKAVLESLGYDYEIIFVDDGSTDRTLEILRELAARDPRV-----KVIrlsrnfgqQAALLAGL 76
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 459495030  71 KRASGDIIALLNSD--DfyiDEFVIEKVVHEFEKKhCDSVYAdlvfVKPNRLEKVVR 125
Cdd:cd04187   77 DHARGDAVITMDADlqD---PPELIPEMLAKWEEG-YDVVYG----VRKNRKESWLK 125
beta3GnTL1_like cd06913
Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of ...
1-161 9.25e-06

Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine ; This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.


Pssm-ID: 133063 [Multi-domain]  Cd Length: 219  Bit Score: 45.53  E-value: 9.25e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030   1 MITACFNSEKTIEDTILSVLHQTYKN-IEYIIIDGASADSTLGIIQKYKDQ-----IACVVSEKD----KGIYDAMNKGI 70
Cdd:cd06913    1 IILPVHNGEQWLDECLESVLQQDFEGtLELSVFNDASTDKSAEIIEKWRKKledsgVIVLVGSHNspspKGVGYAKNQAI 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030  71 KRASGDIIALLNSDDFYIDEFVieKVVHEFEKKHCDSVYADLVF-VKPNRLEKVVRYYESgeFSPKTLLYGVVPAH---- 145
Cdd:cd06913   81 AQSSGRYLCFLDSDDVMMPQRI--RLQYEAALQHPNSIIGCQVRrIPEDSTERYTRWINT--LTREQLLTQVYTSHgptv 156
                        170
                 ....*....|....*...
gi 459495030 146 --PTLFVKKAIHERYGLY 161
Cdd:cd06913  157 imPTWFCSREWFSHVGPF 174
GT_2_like_e cd04192
Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse ...
2-84 1.47e-05

Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133035 [Multi-domain]  Cd Length: 229  Bit Score: 44.97  E-value: 1.47e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030   2 ITACFNSEKTIEDTILSVLHQTY--KNIEYIIIDGASADSTLGIIQKYKD------QIACVVSEKDKGIYDAMNKGIKRA 73
Cdd:cd04192    2 VIAARNEAENLPRLLQSLSALDYpkEKFEVILVDDHSTDGTVQILEFAAAkpnfqlKILNNSRVSISGKKNALTTAIKAA 81
                         90
                 ....*....|.
gi 459495030  74 SGDIIALLNSD 84
Cdd:cd04192   82 KGDWIVTTDAD 92
Glyco_tranf_2_3 pfam13641
Glycosyltransferase like family 2; Members of this family of prokaryotic proteins include ...
2-150 1.69e-05

Glycosyltransferase like family 2; Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis.


Pssm-ID: 433372 [Multi-domain]  Cd Length: 230  Bit Score: 44.67  E-value: 1.69e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030    2 ITACFNSEKTIEDTILSVLHQTYKNIEYIIIDGASADSTL----GIIQKYKDQ-IACVVSEKDKGIY---DAMNKGIKRA 73
Cdd:pfam13641   7 VVPAFNEDSVLGRVLEAILAQPYPPVEVVVVVNPSDAETLdvaeEIAARFPDVrLRVIRNARLLGPTgksRGLNHGFRAV 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030   74 SGDIIALLNSDDFyIDEFVIEKVVHEFEKKHCDSVYADlVFVK--------PNRLEKVVRYyesGEFSPKTLLYGVVPAH 145
Cdd:pfam13641  87 KSDLVVLHDDDSV-LHPGTLKKYVQYFDSPKVGAVGTP-VFSLnrstmlsaLGALEFALRH---LRMMSLRLALGVLPLS 161

                  ....*
gi 459495030  146 PTLFV 150
Cdd:pfam13641 162 GAGSA 166
Glyco_tranf_2_2 pfam10111
Glycosyltransferase like family 2; Members of this family of prokaryotic proteins include ...
1-86 9.48e-05

Glycosyltransferase like family 2; Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis.


Pssm-ID: 313356 [Multi-domain]  Cd Length: 276  Bit Score: 42.65  E-value: 9.48e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030    1 MITACFNSEKT--IEDTILSVLHQTYKNIEYIIIDGASADSTLGIIQKYKDQIACV----VSEKDKGIYDAMNKGIKRAS 74
Cdd:pfam10111   2 VVIPVYNGEKThwIQERILNQTFQYDPEFELIIINDGSTDKTLEEVSSIKDHNLQVyypnAPDTTYSLAASRNRGTSHAI 81
                          90
                  ....*....|..
gi 459495030   75 GDIIALLNSDDF 86
Cdd:pfam10111  82 GEYISFIDGDCL 93
GT2_Chondriotin_Pol_N cd06420
N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase; Chondroitin ...
2-84 1.14e-04

N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase; Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm to undergo cytokinesis and cell division. Chondroitin is synthesized as proteoglycans, sulfated and secreted to the cell surface or extracellular matrix.


Pssm-ID: 133042 [Multi-domain]  Cd Length: 182  Bit Score: 41.79  E-value: 1.14e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030   2 ITACFNSEKTIEDTILSVLHQTYKNIEYIIIDGASADSTLGIIQKYKDQIACVVS---EKDKGIYDA--MNKGIKRASGD 76
Cdd:cd06420    2 IITTYNRPEALELVLKSVLNQSILPFEVIIADDGSTEETKELIEEFKSQFPIPIKhvwQEDEGFRKAkiRNKAIAAAKGD 81

                 ....*...
gi 459495030  77 IIALLNSD 84
Cdd:cd06420   82 YLIFIDGD 89
GT2_AmsE_like cd04195
GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis; AmsE is a ...
16-102 4.49e-04

GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis; AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.


Pssm-ID: 133038 [Multi-domain]  Cd Length: 201  Bit Score: 40.38  E-value: 4.49e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030  16 ILSVLHQTYKNIEYIII-DGASADSTLGIIQKYKDQ--IACVVSEKDKGIYDAMNKGIKRASGDIIALLNSDDFYI-DEF 91
Cdd:cd04195   19 LESILKQTLPPDEVVLVkDGPVTQSLNEVLEEFKRKlpLKVVPLEKNRGLGKALNEGLKHCTYDWVARMDTDDISLpDRF 98
                         90
                 ....*....|.
gi 459495030  92 viEKVVHEFEK 102
Cdd:cd04195   99 --EKQLDFIEK 107
DPM1_like cd06442
DPM1_like represents putative enzymes similar to eukaryotic DPM1; Proteins similar to ...
16-84 1.29e-03

DPM1_like represents putative enzymes similar to eukaryotic DPM1; Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. This protein family belongs to Glycosyltransferase 2 superfamily.


Pssm-ID: 133062 [Multi-domain]  Cd Length: 224  Bit Score: 39.05  E-value: 1.29e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 459495030  16 ILSVLHQTYKNIEY--IIIDGASADSTLGIIQKYKDQ---IACVVSEKDKGIYDAMNKGIKRASGDIIALLNSD 84
Cdd:cd06442   15 LIERLDAALKGIDYeiIVVDDNSPDGTAEIVRELAKEyprVRLIVRPGKRGLGSAYIEGFKAARGDVIVVMDAD 88
GT_2_like_b cd04185
Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse ...
6-196 2.04e-03

Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133028 [Multi-domain]  Cd Length: 202  Bit Score: 38.39  E-value: 2.04e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030   6 FNSEKTIEDTILSVLHQTYKNIEYIIIDGASADSTLGII--QKYKDQIACVVSEKDKGIYDAMNKGIKRA--SG-DIIAL 80
Cdd:cd04185    6 YNRLDLLKECLDALLAQTRPPDHIIVIDNASTDGTAEWLtsLGDLDNIVYLRLPENLGGAGGFYEGVRRAyeLGyDWIWL 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030  81 LNsDDFYIDEFVIEKVVHEFEKKHCDsvyadlvFVKPNrlekvvRYYESGEFSpktllyGVvpahptlFVKKAIHERYGL 160
Cdd:cd04185   86 MD-DDAIPDPDALEKLLAYADKDNPQ-------FLAPL------VLDPDGSFV------GV-------LISRRVVEKIGL 138
                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 459495030 161 YKTDYKISA-DFEMIIRLfvvQKISFSYLKEVLVVMR 196
Cdd:cd04185  139 PDKEFFIWGdDTEYTLRA---SKAGPGIYVPDAVVVH 172
pp-GalNAc-T cd02510
pp-GalNAc-T initiates the formation of mucin-type O-linked glycans; UDP-GalNAc: polypeptide ...
15-83 5.20e-03

pp-GalNAc-T initiates the formation of mucin-type O-linked glycans; UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.


Pssm-ID: 133004 [Multi-domain]  Cd Length: 299  Bit Score: 37.57  E-value: 5.20e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 459495030  15 TILSVLHQTYKN--IEYIIIDGASADSTLGI-----IQKYKDQIACVVSEKDKGIYDAMNKGIKRASGDIIALLNS 83
Cdd:cd02510   17 TVHSVINRTPPEllKEIILVDDFSDKPELKLlleeyYKKYLPKVKVLRLKKREGLIRARIAGARAATGDVLVFLDS 92
Beta4Glucosyltransferase cd02511
UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of ...
1-95 6.67e-03

UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide; UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.


Pssm-ID: 133005 [Multi-domain]  Cd Length: 229  Bit Score: 36.88  E-value: 6.67e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 459495030   1 MITacFNSEKTIEDTILSVLHQTyknIEYIIIDGASADSTLGIIQKYKDQiacVVSEKDKGIYDAMNKGIKRASGDIIAL 80
Cdd:cd02511    6 IIT--KNEERNIERCLESVKWAV---DEIIVVDSGSTDRTVEIAKEYGAK---VYQRWWDGFGAQRNFALELATNDWVLS 77
                         90
                 ....*....|....*
gi 459495030  81 LNSDDfYIDEFVIEK 95
Cdd:cd02511   78 LDADE-RLTPELADE 91
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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