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Conserved domains on  [gi|342880706|gb|EGU81730|]
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hypothetical protein FOXB_07737 [Fusarium oxysporum f. sp. conglutinans Fo5176]

Protein Classification

APC family permease( domain architecture ID 1903533)

APC (amino acid/polyamine/organocation) family permease is involved in the uptake of a specific amino acid and/or polyamine substrate with the concomitant import of a proton

Gene Ontology:  GO:0055085|GO:0022857
PubMed:  24038584|25043943|10931886
TCDB:  2.A.3

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
AA_permease_2 super family cl45918
Amino acid permease;
30-527 1.61e-115

Amino acid permease;


The actual alignment was detected with superfamily member TIGR00913:

Pssm-ID: 459263  Cd Length: 478  Bit Score: 351.59  E-value: 1.61e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706   30 RRGLSPRHVQLMTIAGGIGVGLFVGVGGVLSKAGPLPLVIGYLIYGLgFIWPTMLNVAEMVAWLP-IRGSIYELASRFVD 108
Cdd:TIGR00913   1 KKSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPAGLLIGYAIMGS-IIYCVMQSLGEMATFYPvVSGSFATYASRFVD 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  109 PALGFAMGWTYFYAGAMLVCTEYSAVATVMQYWNTDINPAVWIAIALSVCYFMNMVAVRWYGEAEFIMGSTKILLILGLI 188
Cdd:TIGR00913  80 PAFGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDKVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFI 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  189 MATFITMVGGNPHHDAYGFRNWKN-GDMAHEYYAegatGIFLSICICVRYAVFTIGGPDIISLSAGEIRNPRKTIPKVAK 267
Cdd:TIGR00913 160 ILSIILNCGGGPNHGYIGFRYWHDpGAFAGGTIG----GRFKGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAK 235

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  268 LIVGRILFFYVVGILAVGIICNSRDPRLLGAieTGEAGAAASPWVLGLLRLDIRGfLPGLINFLILLSGWSCGNAYLYSS 347
Cdd:TIGR00913 236 RTFWRILVFYILTLFLIGFLVPYNDPRLLSS--SSSSDSAASPFVIAIQNHGIKV-LPHIFNAVILISVLSAANSSLYAS 312

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  348 SRTLYSLAQDGQAPKIFLRCTRSGVPWVCVTAVTAISLLSFLVASNSASEVFSWFLDLTTVALVVNFTAMTWVFIGWRRA 427
Cdd:TIGR00913 313 SRTLYALAHQGLAPKIFAYVDRRGVPYVAVIVSSLFGLLAFLAVSKKEAEVFTWLLNISGLSGFFTWMCICLSHIRFRKA 392

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  428 LRAQGITRQGennfkkslfkrnsdkqpapgivFPFTAPCASWTPYLCLFIGGSTSIFIGFDIFQP--WSLKGFITSYFGL 505
Cdd:TIGR00913 393 MKAQGRSLDE----------------------LPYKSQTGPYGSYYALFFNILILIAQGYVAFAPvkFSAKSFFEAYLSL 450

                         490       500
                  ....*....|....*....|..
gi 342880706  506 AWFFFMFIFWKVFKRTKFVTPA 527
Cdd:TIGR00913 451 PIFIALYIGHKVYKRDKLIIKL 472
 
Name Accession Description Interval E-value
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
 30-527 1.61e-115

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 351.59  E-value: 1.61e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706   30 RRGLSPRHVQLMTIAGGIGVGLFVGVGGVLSKAGPLPLVIGYLIYGLgFIWPTMLNVAEMVAWLP-IRGSIYELASRFVD 108
Cdd:TIGR00913   1 KKSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPAGLLIGYAIMGS-IIYCVMQSLGEMATFYPvVSGSFATYASRFVD 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  109 PALGFAMGWTYFYAGAMLVCTEYSAVATVMQYWNTDINPAVWIAIALSVCYFMNMVAVRWYGEAEFIMGSTKILLILGLI 188
Cdd:TIGR00913  80 PAFGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDKVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFI 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  189 MATFITMVGGNPHHDAYGFRNWKN-GDMAHEYYAegatGIFLSICICVRYAVFTIGGPDIISLSAGEIRNPRKTIPKVAK 267
Cdd:TIGR00913 160 ILSIILNCGGGPNHGYIGFRYWHDpGAFAGGTIG----GRFKGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAK 235

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  268 LIVGRILFFYVVGILAVGIICNSRDPRLLGAieTGEAGAAASPWVLGLLRLDIRGfLPGLINFLILLSGWSCGNAYLYSS 347
Cdd:TIGR00913 236 RTFWRILVFYILTLFLIGFLVPYNDPRLLSS--SSSSDSAASPFVIAIQNHGIKV-LPHIFNAVILISVLSAANSSLYAS 312

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  348 SRTLYSLAQDGQAPKIFLRCTRSGVPWVCVTAVTAISLLSFLVASNSASEVFSWFLDLTTVALVVNFTAMTWVFIGWRRA 427
Cdd:TIGR00913 313 SRTLYALAHQGLAPKIFAYVDRRGVPYVAVIVSSLFGLLAFLAVSKKEAEVFTWLLNISGLSGFFTWMCICLSHIRFRKA 392

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  428 LRAQGITRQGennfkkslfkrnsdkqpapgivFPFTAPCASWTPYLCLFIGGSTSIFIGFDIFQP--WSLKGFITSYFGL 505
Cdd:TIGR00913 393 MKAQGRSLDE----------------------LPYKSQTGPYGSYYALFFNILILIAQGYVAFAPvkFSAKSFFEAYLSL 450

                         490       500
                  ....*....|....*....|..
gi 342880706  506 AWFFFMFIFWKVFKRTKFVTPA 527
Cdd:TIGR00913 451 PIFIALYIGHKVYKRDKLIIKL 472
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
27-531 3.38e-82

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 264.73  E-value: 3.38e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  27 QQTRRGLSPRHVQLMTIAGGIGVGLFVGVGGVLSKAGPLPLVIGYLIYGLgFIWPTMLNVAEMVAWLPIRGSIYELASRF 106
Cdd:COG0833    8 NKLKRGLKSRHLSMIALGGVIGTGLFLASGYTISQAGPGGALLAYLLGGL-MVYFLMTSLGELAVAMPVSGSFQTYATRF 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 107 VDPALGFAMGWTYFYAGAMLVCTEYSAVATVMQYWNTDINPAVWIAIALSVCYFMNMVAVRWYGEAEFIMGSTKILLILG 186
Cdd:COG0833   87 IDPAFGFAVGWNYWLNWAITVAAELTAAGIIMQYWFPDVPVWIWSLLFLALIFLLNALSVKAFGESEFWFSLIKVITVIA 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 187 LIMATFITMVGGNPHHdAYGFRNWKNGDMAheyYAEGATGIFLSICIcvryAVFTIGGPDIISLSAGEIRNPRKTIPKVA 266
Cdd:COG0833  167 FIIVGLLMIFGIIGGH-APGFSNFTTGDGP---FPGGFLAILGVMMI----VGFSFQGTELIGIAAGESENPEKTIPKAI 238

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 267 KLIVGRILFFYVVGILAVGIIcnsrdprllgaIETGEAGAAASPWVLGLLRLDIrGFLPGLINFLILLSGWSCGNAYLYS 346
Cdd:COG0833  239 RQVFWRILLFYILAIFVIAAL-----------IPYTDAGVAESPFTLVFERAGI-PYAADIMNAVILTAVLSAGNSGLYA 306

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 347 SSRTLYSLAQDGQAPKIFLRCTRSGVPWVCVTAVTAISLLSFLVASNSASEVFSWFLDLTTVALVVnftamTWVFIGW-- 424
Cdd:COG0833  307 STRMLWSLAKEGMAPKIFAKLNKRGVPLNALLATMAVGLLALLSSFFGAGTVYLWLLSISGLTGFI-----AWLGIAIsh 381

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 425 ---RRALRAQGITrqgennfKKSLfkrnsdkqpapgivfPFTAPCASWTPYLCLFIGGSTSIFIGFDIFQpwslkgFITS 501
Cdd:COG0833  382 yrfRRAYVAQGGD-------LEDL---------------KYKAPLFPFGPIFAFILCLIVIIGQAFDPEQ------RIAL 433

                        490       500       510
                 ....*....|....*....|....*....|
gi 342880706 502 YFGLAWFFFMFIFWKVFKRTKFVTPATVDI 531
Cdd:COG0833  434 YIGIPFFLACYLGYKLKKKTKLVPLEEMDL 463
AA_permease pfam00324
Amino acid permease;
37-523 8.27e-82

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 263.80  E-value: 8.27e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706   37 HVQLMTIAGGIGVGLFVGVGGVLSKAGPLPLVIGYLIYGLgFIWPTMLNVAEMVAWLPIRGSIYELASRFVDPALGFAMG 116
Cdd:pfam00324   1 HVQMIALGGVIGTGLFVGSGSVLGQAGPAGALLGYLISGV-VIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATG 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  117 WTYFYAGAMLVCTEYSAVATVMQYWN--TDINPA-VWIAIALSVCYFMNMVAVRWYGEAEFIMGSTKILLILGLIMATFI 193
Cdd:pfam00324  80 WNYWLSWITVLALELTAASILIQFWElvPDIPYLwVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGII 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  194 TMVGGNPHHDAYGFRNWKNGDMAHEyyaegATGIFLSICICVRYAVFTIGGPDIISLSAGEIRNPRKTIPKVAKLIVGRI 273
Cdd:pfam00324 160 LLSGGNPNDGAIFRYLGDNGGKNNF-----PPGFGKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRI 234

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  274 LFFYVVGILAVGIICNSRDPRLLGAIETgeagaAASPWVLGLLRLDIRGFlPGLINFLILLSGWSCGNAYLYSSSRTLYS 353
Cdd:pfam00324 235 TIFYILSLLAIGLLVPWNDPGLLNDSAS-----AASPFVIFFKFLGISGL-APLINAVILTAALSAANSSLYSGSRMLYS 308

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  354 LAQDGQAPKIFLRCTRSGVPWVCVTAVTAISLLSFLVASNSASEVFSWFLDLTTVALVVNFTAMTWVFIGWRRALRAQGI 433
Cdd:pfam00324 309 LARDGLAPKFLKKVDKRGVPLRAILVSMVISLLALLLASLNPAIVFNFLLAISGLSGLIVWGLISLSHLRFRKAFKYQGR 388

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  434 TRQgennfkkslfkrnsdkqpapgiVFPFTAPCASWTPYLCLFIGGSTSIFIGFDIFQP-------WSLKGFITSYFGLA 506
Cdd:pfam00324 389 SID----------------------ELPFKAPLGPLGVILGLAAIIIILIIQFLYAFLPvpggpknWGAGSFAAAYLIVL 446

                         490
                  ....*....|....*..
gi 342880706  507 WFFFMFIFWKVFKRTKF 523
Cdd:pfam00324 447 LFLIILIGVKLHVKNWK 463
PRK10836 PRK10836
lysine transporter; Provisional
 17-524 1.91e-51

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 183.87  E-value: 1.91e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  17 TVADHAVVTIQQTRRGLSPRHVQLMTIAGGIGVGLFVGVGGVLSKAGPLPLVIGYLIYGLgFIWPTMLNVAEMVAWLPIR 96
Cdd:PRK10836   1 MVSETKTTEAPGLRRELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYMLIGL-MVYFLMTSLGELAAYMPVS 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  97 GSIYELASRFVDPALGFAMGWTYFYAGAMLVCTEYSAVATVMQYWNTDINPAVWIAIALSVCYFMNMVAVRWYGEAEF-- 174
Cdd:PRK10836  80 GSFATYGQNYVEEGFGFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYwf 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 175 --IMGSTKILLI-LGLIMATFItMVGGNPHhdayGFRNWKNGDmaheyyAEGATGifLSICICVRYAV-FTIGGPDIISL 250
Cdd:PRK10836 160 slIKVTTVIVFIiVGVLMIIGI-FKGAEPA----GWSNWTIGD------APFAGG--FAAMIGVAMIVgFSFQGTELIGI 226

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 251 SAGEIRNPRKTIPKVAKLIVGRILFFYVVGILAVGIICNSRDPRLLgaiETGEAGAAASPWVL-----GLLRldirgfLP 325
Cdd:PRK10836 227 AAGESEDPAKNIPRAVRQVFWRILLFYVFAILIISLIIPYTDPSLL---RNDVKDISVSPFTLvfqhaGLLS------AA 297

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 326 GLINFLILLSGWSCGNAYLYSSSRTLYSLAQDGQAPKIFLRCTRSGVPWVCVTAVTAISLLSFLVASNSASEVFSWFLdl 405
Cdd:PRK10836 298 AVMNAVILTAVLSAGNSGMYASTRMLYTLACDGKAPRIFAKLSRGGVPRNALYATTVIAGLCFLTSMFGNQTVYLWLL-- 375

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 406 ttvalvvNFTAMTWvFIGW----------RRALRAQGitrqgennfkkslfkRNSDKQPAPGIVFPFtAPCASWTpyLCL 475
Cdd:PRK10836 376 -------NTSGMTG-FIAWlgiaishyrfRRGYVLQG---------------HDLNDLPYRSGFFPL-GPIFAFV--LCL 429

                        490       500       510       520       530
                 ....*....|....*....|....*....|....*....|....*....|.
gi 342880706 476 FI--GGSTSIFIGFDIfqPWSlkGFITSYFGLAWFFFMFIFWKVFKRTKFV 524
Cdd:PRK10836 430 IItlGQNYEAFLKDTI--DWG--GVAATYIGIPLFLIIWFGYKLIKGTHFV 476
 
Name Accession Description Interval E-value
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
 30-527 1.61e-115

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 351.59  E-value: 1.61e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706   30 RRGLSPRHVQLMTIAGGIGVGLFVGVGGVLSKAGPLPLVIGYLIYGLgFIWPTMLNVAEMVAWLP-IRGSIYELASRFVD 108
Cdd:TIGR00913   1 KKSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPAGLLIGYAIMGS-IIYCVMQSLGEMATFYPvVSGSFATYASRFVD 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  109 PALGFAMGWTYFYAGAMLVCTEYSAVATVMQYWNTDINPAVWIAIALSVCYFMNMVAVRWYGEAEFIMGSTKILLILGLI 188
Cdd:TIGR00913  80 PAFGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDKVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFI 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  189 MATFITMVGGNPHHDAYGFRNWKN-GDMAHEYYAegatGIFLSICICVRYAVFTIGGPDIISLSAGEIRNPRKTIPKVAK 267
Cdd:TIGR00913 160 ILSIILNCGGGPNHGYIGFRYWHDpGAFAGGTIG----GRFKGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAK 235

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  268 LIVGRILFFYVVGILAVGIICNSRDPRLLGAieTGEAGAAASPWVLGLLRLDIRGfLPGLINFLILLSGWSCGNAYLYSS 347
Cdd:TIGR00913 236 RTFWRILVFYILTLFLIGFLVPYNDPRLLSS--SSSSDSAASPFVIAIQNHGIKV-LPHIFNAVILISVLSAANSSLYAS 312

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  348 SRTLYSLAQDGQAPKIFLRCTRSGVPWVCVTAVTAISLLSFLVASNSASEVFSWFLDLTTVALVVNFTAMTWVFIGWRRA 427
Cdd:TIGR00913 313 SRTLYALAHQGLAPKIFAYVDRRGVPYVAVIVSSLFGLLAFLAVSKKEAEVFTWLLNISGLSGFFTWMCICLSHIRFRKA 392

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  428 LRAQGITRQGennfkkslfkrnsdkqpapgivFPFTAPCASWTPYLCLFIGGSTSIFIGFDIFQP--WSLKGFITSYFGL 505
Cdd:TIGR00913 393 MKAQGRSLDE----------------------LPYKSQTGPYGSYYALFFNILILIAQGYVAFAPvkFSAKSFFEAYLSL 450

                         490       500
                  ....*....|....*....|..
gi 342880706  506 AWFFFMFIFWKVFKRTKFVTPA 527
Cdd:TIGR00913 451 PIFIALYIGHKVYKRDKLIIKL 472
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
27-531 3.38e-82

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 264.73  E-value: 3.38e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  27 QQTRRGLSPRHVQLMTIAGGIGVGLFVGVGGVLSKAGPLPLVIGYLIYGLgFIWPTMLNVAEMVAWLPIRGSIYELASRF 106
Cdd:COG0833    8 NKLKRGLKSRHLSMIALGGVIGTGLFLASGYTISQAGPGGALLAYLLGGL-MVYFLMTSLGELAVAMPVSGSFQTYATRF 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 107 VDPALGFAMGWTYFYAGAMLVCTEYSAVATVMQYWNTDINPAVWIAIALSVCYFMNMVAVRWYGEAEFIMGSTKILLILG 186
Cdd:COG0833   87 IDPAFGFAVGWNYWLNWAITVAAELTAAGIIMQYWFPDVPVWIWSLLFLALIFLLNALSVKAFGESEFWFSLIKVITVIA 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 187 LIMATFITMVGGNPHHdAYGFRNWKNGDMAheyYAEGATGIFLSICIcvryAVFTIGGPDIISLSAGEIRNPRKTIPKVA 266
Cdd:COG0833  167 FIIVGLLMIFGIIGGH-APGFSNFTTGDGP---FPGGFLAILGVMMI----VGFSFQGTELIGIAAGESENPEKTIPKAI 238

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 267 KLIVGRILFFYVVGILAVGIIcnsrdprllgaIETGEAGAAASPWVLGLLRLDIrGFLPGLINFLILLSGWSCGNAYLYS 346
Cdd:COG0833  239 RQVFWRILLFYILAIFVIAAL-----------IPYTDAGVAESPFTLVFERAGI-PYAADIMNAVILTAVLSAGNSGLYA 306

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 347 SSRTLYSLAQDGQAPKIFLRCTRSGVPWVCVTAVTAISLLSFLVASNSASEVFSWFLDLTTVALVVnftamTWVFIGW-- 424
Cdd:COG0833  307 STRMLWSLAKEGMAPKIFAKLNKRGVPLNALLATMAVGLLALLSSFFGAGTVYLWLLSISGLTGFI-----AWLGIAIsh 381

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 425 ---RRALRAQGITrqgennfKKSLfkrnsdkqpapgivfPFTAPCASWTPYLCLFIGGSTSIFIGFDIFQpwslkgFITS 501
Cdd:COG0833  382 yrfRRAYVAQGGD-------LEDL---------------KYKAPLFPFGPIFAFILCLIVIIGQAFDPEQ------RIAL 433

                        490       500       510
                 ....*....|....*....|....*....|
gi 342880706 502 YFGLAWFFFMFIFWKVFKRTKFVTPATVDI 531
Cdd:COG0833  434 YIGIPFFLACYLGYKLKKKTKLVPLEEMDL 463
AA_permease pfam00324
Amino acid permease;
37-523 8.27e-82

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 263.80  E-value: 8.27e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706   37 HVQLMTIAGGIGVGLFVGVGGVLSKAGPLPLVIGYLIYGLgFIWPTMLNVAEMVAWLPIRGSIYELASRFVDPALGFAMG 116
Cdd:pfam00324   1 HVQMIALGGVIGTGLFVGSGSVLGQAGPAGALLGYLISGV-VIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATG 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  117 WTYFYAGAMLVCTEYSAVATVMQYWN--TDINPA-VWIAIALSVCYFMNMVAVRWYGEAEFIMGSTKILLILGLIMATFI 193
Cdd:pfam00324  80 WNYWLSWITVLALELTAASILIQFWElvPDIPYLwVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGII 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  194 TMVGGNPHHDAYGFRNWKNGDMAHEyyaegATGIFLSICICVRYAVFTIGGPDIISLSAGEIRNPRKTIPKVAKLIVGRI 273
Cdd:pfam00324 160 LLSGGNPNDGAIFRYLGDNGGKNNF-----PPGFGKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRI 234

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  274 LFFYVVGILAVGIICNSRDPRLLGAIETgeagaAASPWVLGLLRLDIRGFlPGLINFLILLSGWSCGNAYLYSSSRTLYS 353
Cdd:pfam00324 235 TIFYILSLLAIGLLVPWNDPGLLNDSAS-----AASPFVIFFKFLGISGL-APLINAVILTAALSAANSSLYSGSRMLYS 308

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  354 LAQDGQAPKIFLRCTRSGVPWVCVTAVTAISLLSFLVASNSASEVFSWFLDLTTVALVVNFTAMTWVFIGWRRALRAQGI 433
Cdd:pfam00324 309 LARDGLAPKFLKKVDKRGVPLRAILVSMVISLLALLLASLNPAIVFNFLLAISGLSGLIVWGLISLSHLRFRKAFKYQGR 388

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  434 TRQgennfkkslfkrnsdkqpapgiVFPFTAPCASWTPYLCLFIGGSTSIFIGFDIFQP-------WSLKGFITSYFGLA 506
Cdd:pfam00324 389 SID----------------------ELPFKAPLGPLGVILGLAAIIIILIIQFLYAFLPvpggpknWGAGSFAAAYLIVL 446

                         490
                  ....*....|....*..
gi 342880706  507 WFFFMFIFWKVFKRTKF 523
Cdd:pfam00324 447 LFLIILIGVKLHVKNWK 463
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
27-522 1.73e-71

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 236.56  E-value: 1.73e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  27 QQTRRGLSPRHVQLMTIAGGIGVGLFVGVGGVLSKAGPLpLVIGYLIYGLgFIWPTMLNVAEMVAWLPIRGSIYELASRF 106
Cdd:COG1113   11 EGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGPA-VLLSYLIAGL-IVFLVMRALGEMAVANPVSGSFSDYAREY 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 107 VDPALGFAMGWTYFYAGAMLVCTEYSAVATVMQYWNTDINPAVWIAIALSVCYFMNMVAVRWYGEAEFIMGSTKILLILG 186
Cdd:COG1113   89 LGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFPDVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFALIKVVAIVA 168

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 187 LIM--ATFITMVGGNPHHDAYGFRN-WKNGDMAheyyAEGATGIFLSICIcvryAVFTIGGPDIISLSAGEIRNPRKTIP 263
Cdd:COG1113  169 FIVvgLLLIFFGFGLPGGPPAGLSNlWDHGGFF----PNGIGGVLAALQI----VVFAFGGIELVGIAAAEAKDPEKTIP 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 264 KVAKLIVGRILFFYVvgiLAVGIIcnsrdprlLGAIETGEAGAAASPWVLGLLRLDIrGFLPGLINFLILLSGWSCGNAY 343
Cdd:COG1113  241 KAINSVIWRILLFYV---GSLFVI--------LALVPWNQIGAGGSPFVTVFSLLGI-PAAAGIMNFVVLTAALSSLNSG 308

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 344 LYSSSRTLYSLAQDGQAPKIFLRCTRSGVPWVCVTAVTAISLLSFLVASNSASEVFSWFLDLTTVALVVNFTAMTWVFIG 423
Cdd:COG1113  309 LYSTSRMLYSLAERGDAPKFFGKLSKRGVPVRAILLSAVVLLIGVVLNYLLPEKAFTFLLSISGFGALFVWLMILVSQLK 388

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 424 WRRALRAQGITRqgennfkkslfkrnsdkqpapgivFPFTAPCASWTPYLCL-FIGGstsIFIGFdIFQPwslKGFITSY 502
Cdd:COG1113  389 FRRRLPREGAAA------------------------LKFKMPGFPYTSYLTLaFLAA---VLVLM-AFDP---DTRIALI 437

                        490       500
                 ....*....|....*....|
gi 342880706 503 FGLAWFFFMFIFWKVFKRTK 522
Cdd:COG1113  438 VGPVWLALLVVGYFLVRRRR 457
PRK10836 PRK10836
lysine transporter; Provisional
 17-524 1.91e-51

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 183.87  E-value: 1.91e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  17 TVADHAVVTIQQTRRGLSPRHVQLMTIAGGIGVGLFVGVGGVLSKAGPLPLVIGYLIYGLgFIWPTMLNVAEMVAWLPIR 96
Cdd:PRK10836   1 MVSETKTTEAPGLRRELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYMLIGL-MVYFLMTSLGELAAYMPVS 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  97 GSIYELASRFVDPALGFAMGWTYFYAGAMLVCTEYSAVATVMQYWNTDINPAVWIAIALSVCYFMNMVAVRWYGEAEF-- 174
Cdd:PRK10836  80 GSFATYGQNYVEEGFGFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYwf 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 175 --IMGSTKILLI-LGLIMATFItMVGGNPHhdayGFRNWKNGDmaheyyAEGATGifLSICICVRYAV-FTIGGPDIISL 250
Cdd:PRK10836 160 slIKVTTVIVFIiVGVLMIIGI-FKGAEPA----GWSNWTIGD------APFAGG--FAAMIGVAMIVgFSFQGTELIGI 226

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 251 SAGEIRNPRKTIPKVAKLIVGRILFFYVVGILAVGIICNSRDPRLLgaiETGEAGAAASPWVL-----GLLRldirgfLP 325
Cdd:PRK10836 227 AAGESEDPAKNIPRAVRQVFWRILLFYVFAILIISLIIPYTDPSLL---RNDVKDISVSPFTLvfqhaGLLS------AA 297

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 326 GLINFLILLSGWSCGNAYLYSSSRTLYSLAQDGQAPKIFLRCTRSGVPWVCVTAVTAISLLSFLVASNSASEVFSWFLdl 405
Cdd:PRK10836 298 AVMNAVILTAVLSAGNSGMYASTRMLYTLACDGKAPRIFAKLSRGGVPRNALYATTVIAGLCFLTSMFGNQTVYLWLL-- 375

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 406 ttvalvvNFTAMTWvFIGW----------RRALRAQGitrqgennfkkslfkRNSDKQPAPGIVFPFtAPCASWTpyLCL 475
Cdd:PRK10836 376 -------NTSGMTG-FIAWlgiaishyrfRRGYVLQG---------------HDLNDLPYRSGFFPL-GPIFAFV--LCL 429

                        490       500       510       520       530
                 ....*....|....*....|....*....|....*....|....*....|.
gi 342880706 476 FI--GGSTSIFIGFDIfqPWSlkGFITSYFGLAWFFFMFIFWKVFKRTKFV 524
Cdd:PRK10836 430 IItlGQNYEAFLKDTI--DWG--GVAATYIGIPLFLIIWFGYKLIKGTHFV 476
PRK10249 PRK10249
phenylalanine transporter; Provisional
 12-520 4.01e-48

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 174.02  E-value: 4.01e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  12 ENISTTVADHAVVTIQQTRRGLSPRHVQLMTIAGGIGVGLFVGVGGVLSKAGPlPLVIGYLIYGLgFIWPTMLNVAEMVA 91
Cdd:PRK10249   2 KNASTVSEDTASNQEPTLHRGLHNRHIQLIALGGAIGTGLFLGIGPAIQMAGP-AVLLGYGVAGI-IAFLIMRQLGEMVV 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  92 WLPIRGSIYELASRFVDPALGFAMGWTYFYAGAMLVCTEYSAVATVMQYWNTDINPAVWIAIALSVCYFMNMVAVRWYGE 171
Cdd:PRK10249  80 EEPVSGSFAHFAYKYWGPFAGFLSGWNYWVMFVLVGMAELTAAGIYMQYWFPDVPTWIWAAAFFIIINAVNLVNVRLYGE 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 172 AEFIMGSTKILLILGLIMATFITMVGGNPHHDAyGFRN-WKNGDmaheYYAEGATGIFLSICICvryaVFTIGGPDIISL 250
Cdd:PRK10249 160 TEFWFALIKVLAIIGMIGFGLWLLFSGHGGEKA-SIDNlWRYGG----FFATGWNGLILSLAVI----MFSFGGLELIGI 230

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 251 SAGEIRNPRKTIPKVAKLIVGRILFFYvVGILAVgiicnsrdprLLGAIETGEAGAAASPWVLGLLRLDiRGFLPGLINF 330
Cdd:PRK10249 231 TAAEARDPEKSIPKAVNQVVYRILLFY-IGSLVV----------LLALYPWVEVKSNSSPFVMIFHNLD-SNVVASALNF 298

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 331 LILLSGWSCGNAYLYSSSRTLYSLAQDGQAPKIFLRCTRSGVPWVCVTAVTAISLLSFLVASNSASEVFSWFLDLTTVAL 410
Cdd:PRK10249 299 VILVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLTRVSRRGVPINSLMLSGAITSLVVLINYLLPQKAFGLLMALVVATL 378

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 411 VVNFTAMTWVFIGWRRALRAQGitrqgennfKKSLFKrnsdkqpapGIVFPFTApcaswtpYLCLfiggstsIFIGFDIF 490
Cdd:PRK10249 379 LLNWIMICLAHLRFRAAMRRQG---------RETQFK---------ALLYPFGN-------YLCI-------AFLGMILL 426

                        490       500       510
                 ....*....|....*....|....*....|.
gi 342880706 491 QPWSLKGFITSYFGL-AWFFFMFIFWKVFKR 520
Cdd:PRK10249 427 LMCTMDDMRLSAILLpVWIVFLFVAFKTLRR 457
PRK10238 PRK10238
aromatic amino acid transporter AroP;
27-434 5.14e-42

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 157.04  E-value: 5.14e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  27 QQTRRGLSPRHVQLMTIAGGIGVGLFVGVGGVLSKAGPlPLVIGYLIYG-LGFIwpTMLNVAEMVAWLPIRGSIYELASR 105
Cdd:PRK10238   8 EQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGP-GIILGYAIAGfIAFL--IMRQLGEMVVEEPVAGSFSHFAYK 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 106 FVDPALGFAMGWTYFYAGAMLVCTEYSAVATVMQYWNTDINPAVWIAIALSVCYFMNMVAVRWYGEAEFIMGSTKILLIL 185
Cdd:PRK10238  85 YWGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVV 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 186 GLIMATFITMVGGNPHHDAYGFRNWKNGDmaheYYAEGATGIFLSICICVryavFTIGGPDIISLSAGEIRNPRKTIPKV 265
Cdd:PRK10238 165 AMIIFGGWLLFSGNGGPQATVSNLWDQGG----FLPHGFTGLVMMMAIIM----FSFGGLELVGITAAEADNPEQSIPKA 236

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 266 AKLIVGRILFFYVvGILAVgiicnsrdprLLGAIETGEAGAAASPWVLGLLRLDiRGFLPGLINFLILLSGWSCGNAYLY 345
Cdd:PRK10238 237 TNQVIYRILIFYI-GSLAV----------LLSLMPWTRVTADTSPFVLIFHELG-DTFVANALNIVVLTAALSVYNSCVY 304

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 346 SSSRTLYSLAQDGQAPKIFLRCTRSGVPWVCVTAVTAISLLSFLVASNSASEVFSWFLDLTTVALVVNFTAMTWVFIGWR 425
Cdd:PRK10238 305 CNSRMLFGLAQQGNAPKALASVDKRGVPVNTILVSALVTALCVLINYLAPESAFGLLMALVVSALVINWAMISLAHMKFR 384


                 ....*....
gi 342880706 426 RALRAQGIT 434
Cdd:PRK10238 385 RAKQEQGVV 393
PRK11387 PRK11387
S-methylmethionine permease;
21-433 6.24e-34

S-methylmethionine permease;


Pssm-ID: 236904  Cd Length: 471  Bit Score: 134.59  E-value: 6.24e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  21 HAVVTIQQTRRGLSPRHVQLMTIAGGIGVGLFVGVGGVLSKAGPLPLVIGYLIYGLgFIWPTMLNVAEMVAWLPIRGSIY 100
Cdd:PRK11387   4 PTSQQAGQFKRTMKVRHLVMLSLGGVIGTGLFFNTGYIISTTGAAGTLLAYLIGAL-VVYLVMQCLGELSVAMPETGAFH 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 101 ELASRFVDPALGFAMGWTYFYAGAMLVCTEYSAVATVMQYWNTDINPAVWIAIALSVCYFMNMVAVRWYGEAEFIMGSTK 180
Cdd:PRK11387  83 VYAARYLGPATGYTVAWLYWLTWTVALGSSLTAAGFCMQYWFPQVPVWPWCLLFCALIFGLNVVSTRFFAEGEFWFSLIK 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 181 ILLILGLI------MATFITMVGGNPhhdAYGFRNWKngdmAHEYYAEGATGIFLSICicvryAV-FTIGGPDIISLSAG 253
Cdd:PRK11387 163 VVTILAFIvlggaaIFGFIPMQDGSP---APGLRNLT----AEGWFPHGGLPILMTMV-----AVnFAFSGTELIGIAAG 230

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 254 EIRNPRKTIPKVAKLIVGRILFFYVVGILAvgiicnsrdprLLGAIETGEAGAAASPWVLGLLRLDIRgFLPGLINFLIL 333
Cdd:PRK11387 231 ETENPAKVIPVAIRTTIARLVIFFVGTVLV-----------LAALIPMQQAGVEKSPFVLVFEKVGIP-YAADIFNFVIL 298

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 334 LSGWSCGNAYLYSSSRTLYSLAQDGQAPKIFLRCTRSGVPWVCVTAVTAISLLSFLVASNSASEVFSWFLDLTTVALVVN 413
Cdd:PRK11387 299 TAILSAANSGLYASGRMLWSLSNEGTLPACFARLTKRGIPLTALSVSMLGGLLALFSSVVAPDTVFVALSAISGFAVVAV 378

                        410       420
                 ....*....|....*....|
gi 342880706 414 FTAMTWVFIGWRRALRAQGI 433
Cdd:PRK11387 379 WLSICASHFMFRRRHLRDGK 398
PRK10746 PRK10746
putative transport protein YifK; Provisional
 27-392 8.71e-33

putative transport protein YifK; Provisional


Pssm-ID: 182694  Cd Length: 461  Bit Score: 131.09  E-value: 8.71e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  27 QQTRRGLSPRHVQLMTIAGGIGVGLFVGVGGVLSKAGPlPLVIGYLIYGLgFIWPTMLNVAEMVAWLPIRGSIYELASRF 106
Cdd:PRK10746   6 PELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGP-SVLLAYIIAGL-FVFFIMRSMGEMLFLEPVTGSFAVYAHRY 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 107 VDPALGFAMGWTYFYAGAMLVCTEYSAVATVMQYWNTDINPAVWIAIALSVCYFMNMVAVRWYGEAEFIMGSTKILLILG 186
Cdd:PRK10746  84 MSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPEMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTTIIV 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 187 LIMATF-ITMVGGNPHHDAYGFRNWkngdMAH-EYYAEGATGIFLSICICVRyavfTIGGPDIISLSAGEIRNPRKTIPK 264
Cdd:PRK10746 164 MIVIGLgVIFFGFGNGGQSIGFSNL----TEHgGFFAGGWKGFLTALCIVVA----SYQGVELIGITAGEAKNPQVTLRS 235

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 265 VAKLIVGRILFFYVVGILAVGIIcnsrdprllgaIETGEAGAAASPWVLGLLRLDIRGfLPGLINFLILLSGWSCGNAYL 344
Cdd:PRK10746 236 AVGKVLWRILIFYVGAIFVIVTI-----------FPWNEIGSNGSPFVLTFAKIGITA-AAGIINFVVLTAALSGCNSGM 303

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*...
gi 342880706 345 YSSSRTLYSLAQDGQAPKIFLRCTRSGVPWVCVtavtAISLLSFLVAS 392
Cdd:PRK10746 304 YSCGRMLYALAKNRQLPAAMAKVSRHGVPVAGV----AVSILILLVGS 347
proY PRK10580
putative proline-specific permease; Provisional
 30-428 1.57e-30

putative proline-specific permease; Provisional


Pssm-ID: 182566 [Multi-domain]  Cd Length: 457  Bit Score: 124.55  E-value: 1.57e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  30 RRGLSPRHVQLMTIAGGIGVGLFVGVGGVLSKAGPlPLVIGYLIYGLgFIWPTMLNVAEMVAWLPIRGSIYELASRFVDP 109
Cdd:PRK10580   8 KRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGP-SVLLAYIIGGV-AAYIIMRALGEMSVHNPAASSFSRYAQENLGP 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 110 ALGFAMGWTYFYAGAMLVCTEYSAVATVMQYWNTDINPAVWIAIALSVCYFMNMVAVRWYGEAEFIMGSTKILLILGLIM 189
Cdd:PRK10580  86 LAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIV 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 190 ATFITMV-----GGNPhhdaYGFRN-WKNGDmaheYYAEGATGIFLSIcicvRYAVFTIGGPDIISLSAGEIRNPRKTIP 263
Cdd:PRK10580 166 AGIGIIIwgignGGQP----TGIHNlWSNGG----FFSNGWLGMVMSL----QMVMFAYGGIEIIGITAGEAKDPEKSIP 233

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 264 KVAKLIVGRILFFYVvGILAVgiicnsrdprLLGAIETGEAGAAASPWVLGLLRLDIrGFLPGLINFLILLSGWSCGNAY 343
Cdd:PRK10580 234 RAINSVPMRILVFYV-GTLFV----------IMSIYPWNQVGTNGSPFVLTFQHMGI-TFAASILNFVVLTASLSAINSD 301

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 344 LYSSSRTLYSLAQDGQAPKIFLRCTRSGVPWVCVTAVTAISLLSFLVASNSASEVFSWFLDLTTVALVVNFTAMTWVFIG 423
Cdd:PRK10580 302 VFGVGRMLHGMAEQGSAPKIFSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIA 381


                 ....*
gi 342880706 424 WRRAL 428
Cdd:PRK10580 382 FRRRL 386
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
27-426 1.08e-27

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 115.76  E-value: 1.08e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  27 QQTRRGLSPRHVQLMTIAGGIGVGLFVGVGGVLSKAGPLpLVIGYLIYGLGFIwPTMLNVAEMVAWLPIRGSIYELASRF 106
Cdd:COG0531    7 SELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPA-AILAWLIAGLLAL-LVALSYAELASAFPRAGGAYTYARRA 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 107 VDPALGFAMGWTYFYAGAMLVCTEYSAVATVMQYWNTDINPAVWIAIALSVCYFMNMVAVRWYGEAEFIMGSTKILLILG 186
Cdd:COG0531   85 LGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLLVLLL 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 187 LIMATFITMVGGNPHHDAYGFRNWkngdmaheyyaeGATGIFLSIcicvryAVFTIGGPDIISLSAGEIRNPRKTIPKVA 266
Cdd:COG0531  165 FIVVGLFAFDPANFTPFLPAGGGL------------SGVLAALAL------AFFAFTGFEAIANLAEEAKNPKRNIPRAI 226

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 267 KLIVGRILFFYVVGILAVgiicnsrdprlLGAIETGEAGAAASPWVLGLLRLdIRGFLPGLINFLILLSGWSCGNAYLYS 346
Cdd:COG0531  227 ILSLLIVGVLYILVSLAL-----------TGVVPYDELAASGAPLADAAEAV-FGPWGAILIALGALLSLLGALNASILG 294

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 347 SSRTLYSLAQDGQAPKIFLRC-TRSGVPWVCVTAVTAISLLSFLVASNSasevFSWFLDLTTVALVVNFTAMTWVFIGWR 425
Cdd:COG0531  295 ASRLLYAMARDGLLPKVFAKVhPRFGTPVNAILLTGVIALLLLLLGAAS----FTALASLASVGVLLAYLLVALAVIVLR 370


                 .
gi 342880706 426 R 426
Cdd:COG0531  371 R 371
PRK11049 PRK11049
D-alanine/D-serine/glycine permease; Provisional
 15-373 1.75e-27

D-alanine/D-serine/glycine permease; Provisional


Pssm-ID: 236830  Cd Length: 469  Bit Score: 115.60  E-value: 1.75e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  15 STTVADHAVVTIQQTRRGLSPRHVQLMTIAGGIGVGLFVGVGGVLSKAGPlPLVIGYLIYG--LGFIwptMLNVAEMVAW 92
Cdd:PRK11049   4 VKVVADDQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGP-SIIFVYMIIGfmLFFV---MRAMGELLLS 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  93 LPIRGSIYELASRFVDPALGFAMGWTYFYAGAMLVCTEYSAVATVMQYWNTDINPavWIAIALSVCYFM--NMVAVRWYG 170
Cdd:PRK11049  80 NLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGIADVVAITAYAQFWFPDLSD--WVASLAVVLLLLslNLATVKMFG 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 171 EAEFIMGSTKILLILGLImATFITMVGGN---PHHDAYGFRN-WKNGDMaheyYAEGATGIFLSICIcvryAVFTIGGPD 246
Cdd:PRK11049 158 EMEFWFAMIKIVAIVALI-VVGLVMVAMHfqsPTGVEASFAHlWNDGGM----FPKGLSGFFAGFQI----AVFAFVGIE 228

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 247 IISLSAGEIRNPRKTIPKVAKLIVGRILFFYVVGILAVGIICNSRDprllgaietgeAGAAASPWVlgllRLDIRGFLP- 325
Cdd:PRK11049 229 LVGTTAAETKDPEKSLPRAINSIPIRIIMFYVFALIVIMSVTPWSS-----------VVPDKSPFV----ELFVLVGLPa 293

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|
gi 342880706 326 --GLINFLILLSGWSCGNAYLYSSSRTLYSLAQDGQAPKIFLRCTRSGVP 373
Cdd:PRK11049 294 aaSVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKAFAKLSKRAVP 343
PRK10197 PRK10197
GABA permease;
40-432 3.93e-25

GABA permease;


Pssm-ID: 182297  Cd Length: 446  Bit Score: 108.56  E-value: 3.93e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  40 LMTIAGGIGVGLFVGVGGVLSKAGPlPLVIGYLIYGLgFIWPTMLNVAEMVAWLPIRGSIYELASRFVDPALGFAMGWTY 119
Cdd:PRK10197   1 MLSIAGVIGASLFVGSSVAIAEAGP-AVLLAYLFAGL-LVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLY 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 120 FYAGAMLVCTEYSAVATVMQYWNTDINPAVWIAIALSVCYFMNMVAVRWYGEAEFIMGSTKILLILGLIMATFITMVGGN 199
Cdd:PRK10197  79 WWFWVLVIPLEANIAAMILHSWVPGIPIWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKVIAILAFIFLGAVAISGFY 158

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 200 PHHDAYGF-RNWKNGDMAHEYYAEGATGIFLSIcicvryavFTIGGPDIISLSAGEIRNPRKTIPKVAKLIVGRILFFYV 278
Cdd:PRK10197 159 PYAEVSGIsRLWDSGGFMPNGFGAVLSAMLITM--------FSFMGAEIVTIAAAESDTPEKHIVRATNSVIWRISIFYL 230

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 279 VGILAVGIICNSRDPrllgaietGEAGAAASPWVLGLLRLDIRGFLpglINFLILLSGWSCGNAYLYSSSRTLYSLAQDG 358
Cdd:PRK10197 231 CSIFVVVALIPWNMP--------GLKAVGSYRSVLELLNIPHAKLI---MDCVILLSVTSCLNSALYTASRMLYSLSRRG 299

                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 342880706 359 QAPKIFLRCTRSGVPWVCVTAVTAISLLSFLVASNSASEVFSWFLDLTTVALVVNFTAMTWVFIGWRRALRAQG 432
Cdd:PRK10197 300 DAPAVMGKINRSKTPYVAVLLSTGAAFLTVVVNYYAPAKVFKFLIDSSGAIALLVYLVIAVSQLRMRKILRAEG 373
PRK15049 PRK15049
L-asparagine permease;
31-422 3.96e-25

L-asparagine permease;


Pssm-ID: 185009  Cd Length: 499  Bit Score: 108.94  E-value: 3.96e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  31 RGLSPRHVQLMTIAGGIGVGLFVGVGGVLSKAGPlPLVIGYLIYGLgFIWPTMLNVAEMVAWLPIRGSIYELASRFVDPA 110
Cdd:PRK15049  28 KAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGP-ALALVYLICGL-FSFFILRALGELVLHRPSSGSFVSYAREFLGEK 105

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 111 LGFAMGWTYFYAGAMLVCTEYSAVATVMQYWNT--DINPAVWIAIALSVCYFMNMVAVRWYGEAEFIMGSTKILLILGLI 188
Cdd:PRK15049 106 AAYVAGWMYFINWAMTGIVDITAVALYMHYWGAfgGVPQWVFALAALTIVGTMNMIGVKWFAEMEFWFALIKVLAIVTFL 185

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 189 MATFITMVGGNP-HHDAYGFRNWKNGDmahEYYAEGatgiFLSICICVRYAVFTIGGPDIISLSAGEIRNPRKTIPKVAK 267
Cdd:PRK15049 186 VVGTVFLGSGQPlDGNTTGFHLITDNG---GFFPHG----LLPALVLIQGVVFAFASIEMVGTAAGECKDPQTMVPKAIN 258

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706 268 LIVGRILFFYVVGILAVGIIcnsrdprllgaIETGEAGAAASPWVLGLLRLDIRgFLPGLINFLILLSGWSCGNAYLYSS 347
Cdd:PRK15049 259 SVIWRIGLFYVGSVVLLVML-----------LPWSAYQAGQSPFVTFFSKLGVP-YIGSIMNIVVLTAALSSLNSGLYCT 326

                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 342880706 348 SRTLYSLAQDGQAPKIFLRCTRSGVPWVCVTAVTAISLLSFLVASNSASEVFSWFLDLTTVALVVnftamTWVFI 422
Cdd:PRK15049 327 GRILRSMAMGGSAPSFMAKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIA-----SWAFI 396
AA_permease_2 pfam13520
Amino acid permease;
65-417 6.08e-17

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 83.13  E-value: 6.08e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706   65 LPLVIGYLIYGLGFIWPTMLNVAEMVAWLPIRGSIYELASRFVDPALGFAMGWTYFYAGAMLVCTEYSAVATVMQY-WNT 143
Cdd:pfam13520  30 PALIVWGWIAAIIFSLAVGLVYAELSSALPRSGGIYVYLENAFGKFVAFLAGWSNWFAYVLGLASSASVAASYLLSaLGP 109

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  144 DINPAVW----IAIA-LSVCYFMNMVAVRWYGEAEFIMGSTKILLILGLIMATFITMVGGNPHHDaygfrnwkNGDMAHE 218
Cdd:pfam13520 110 DLVPTTWltygIAIAiLIIFAIINIRGVRESAKIQNILGILKLLLPLILIIILGLVTADGGGFNL--------LSGEWHT 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  219 YYAEGATGIFLSICIcvryAVFTIGGPDIISLSAGEirNPRKTIPKVAKLIVGRILFFYVVGILAVGIIcnsrdprlLGA 298
Cdd:pfam13520 182 FFPDGWPGVFAGFLG----VLWSFTGFESAANVSEE--VKKRNVPKAIFIGVIIVGVLYILVNIAFFGV--------VPD 247

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 342880706  299 IETGEAGAAASPWVLgLLRLDIRGFLPGLINFLILLSGWSCGNAYLYSSSRTLYSLAQDGQAP--KIFLRCTRSGVPWVC 376
Cdd:pfam13520 248 DEIALSSGLGQVAAL-LFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPfsRFFAKVNKFGSPIRA 326

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 342880706  377 VtAVTAISLLSFLVASNSASEVFSWFLDLTTVALVVNFTAM 417
Cdd:pfam13520 327 I-ILTAILSLILLLLFLLSPAAYNALLSLSAYGYLLSYLLP 366
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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