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Conserved domains on  [gi|328867300|gb|EGG15683|]
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cytochrome b5 domain-containing protein [Cavenderia fasciculata]

Protein Classification

cytochrome b5-like heme/steroid binding domain-containing protein( domain architecture ID 10445738)

cytochrome b5-like heme/steroid binding domain-containing protein such as cytochrome b5, a membrane-bound hemoprotein that functions as an electron carrier for several membrane-bound oxygenases and Arabidopsis thaliana steroid-binding proteins

CATH:  3.10.120.10
Gene Ontology:  GO:0097159|GO:0016020
PubMed:  12537557|7893819

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Cyt-b5 pfam00173
Cytochrome b5-like Heme/Steroid binding domain; This family includes heme binding domains from ...
 135-206 1.52e-23

Cytochrome b5-like Heme/Steroid binding domain; This family includes heme binding domains from a diverse range of proteins. This family also includes proteins that bind to steroids. The family includes progesterone receptors. Many members of this subfamily are membrane anchored by an N-terminal transmembrane alpha helix. This family also includes a domain in some chitin synthases. There is no known ligand for this domain in the chitin synthases.


:

Pssm-ID: 459698 [Multi-domain]  Cd Length: 74  Bit Score: 89.60  E-value: 1.52e-23
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 328867300  135 TLEVIAKHNKRDDCWLLINGKVYNVSSFIEEHPGG-DIILAGAGKDCTTMFELSGMGSDVYLQM-KDYHIGYCD 206
Cdd:pfam00173   1 TLEELSKHNGDGDCWVAINGKVYDVTKFLKEHPGGeDVILSAAGKDATDAFEAIGHSEDAAEKLlKKYRIGELA 74
 
Name Accession Description Interval E-value
Cyt-b5 pfam00173
Cytochrome b5-like Heme/Steroid binding domain; This family includes heme binding domains from ...
 135-206 1.52e-23

Cytochrome b5-like Heme/Steroid binding domain; This family includes heme binding domains from a diverse range of proteins. This family also includes proteins that bind to steroids. The family includes progesterone receptors. Many members of this subfamily are membrane anchored by an N-terminal transmembrane alpha helix. This family also includes a domain in some chitin synthases. There is no known ligand for this domain in the chitin synthases.


Pssm-ID: 459698 [Multi-domain]  Cd Length: 74  Bit Score: 89.60  E-value: 1.52e-23
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 328867300  135 TLEVIAKHNKRDDCWLLINGKVYNVSSFIEEHPGG-DIILAGAGKDCTTMFELSGMGSDVYLQM-KDYHIGYCD 206
Cdd:pfam00173   1 TLEELSKHNGDGDCWVAINGKVYDVTKFLKEHPGGeDVILSAAGKDATDAFEAIGHSEDAAEKLlKKYRIGELA 74
CYB5 COG5274
Cytochrome b involved in lipid metabolism [Energy production and conversion, Lipid transport ...
 128-203 4.46e-21

Cytochrome b involved in lipid metabolism [Energy production and conversion, Lipid transport and metabolism];


Pssm-ID: 444085 [Multi-domain]  Cd Length: 93  Bit Score: 83.93  E-value: 4.46e-21
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 328867300 128 DETLPVFTLEVIAKHNKRDDCWLLINGKVYNVSSFIEEHPGG-DIILAGAGKDCTTMFELSGMGSD-VYLQMKDYHIG 203
Cdd:COG5274   12 AAPEKTYTLAEVATHNTLSDCWMAIDGNVYDLTEYIPKHPGGeAVILRWCGKDATEAFNTKHPHSPkAERLLESYRIG 89
PLN02252 PLN02252
nitrate reductase [NADPH]
 134-206 2.23e-16

nitrate reductase [NADPH]


Pssm-ID: 215141 [Multi-domain]  Cd Length: 888  Bit Score: 77.41  E-value: 2.23e-16
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 328867300 134 FTLEVIAKHNKRDDCWLLINGKVYNVSSFIEEHPGG-DIILAGAGKDCTTMFElsGMGSD-VYLQMKDYHIGYCD 206
Cdd:PLN02252 520 YTMSEVRKHNSEDSCWIVVHGHVYDCTRFLKDHPGGaDSILINAGTDCTEEFD--AIHSDkAKKMLEDYRIGELV 592
 
Name Accession Description Interval E-value
Cyt-b5 pfam00173
Cytochrome b5-like Heme/Steroid binding domain; This family includes heme binding domains from ...
 135-206 1.52e-23

Cytochrome b5-like Heme/Steroid binding domain; This family includes heme binding domains from a diverse range of proteins. This family also includes proteins that bind to steroids. The family includes progesterone receptors. Many members of this subfamily are membrane anchored by an N-terminal transmembrane alpha helix. This family also includes a domain in some chitin synthases. There is no known ligand for this domain in the chitin synthases.


Pssm-ID: 459698 [Multi-domain]  Cd Length: 74  Bit Score: 89.60  E-value: 1.52e-23
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 328867300  135 TLEVIAKHNKRDDCWLLINGKVYNVSSFIEEHPGG-DIILAGAGKDCTTMFELSGMGSDVYLQM-KDYHIGYCD 206
Cdd:pfam00173   1 TLEELSKHNGDGDCWVAINGKVYDVTKFLKEHPGGeDVILSAAGKDATDAFEAIGHSEDAAEKLlKKYRIGELA 74
CYB5 COG5274
Cytochrome b involved in lipid metabolism [Energy production and conversion, Lipid transport ...
 128-203 4.46e-21

Cytochrome b involved in lipid metabolism [Energy production and conversion, Lipid transport and metabolism];


Pssm-ID: 444085 [Multi-domain]  Cd Length: 93  Bit Score: 83.93  E-value: 4.46e-21
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 328867300 128 DETLPVFTLEVIAKHNKRDDCWLLINGKVYNVSSFIEEHPGG-DIILAGAGKDCTTMFELSGMGSD-VYLQMKDYHIG 203
Cdd:COG5274   12 AAPEKTYTLAEVATHNTLSDCWMAIDGNVYDLTEYIPKHPGGeAVILRWCGKDATEAFNTKHPHSPkAERLLESYRIG 89
PLN02252 PLN02252
nitrate reductase [NADPH]
 134-206 2.23e-16

nitrate reductase [NADPH]


Pssm-ID: 215141 [Multi-domain]  Cd Length: 888  Bit Score: 77.41  E-value: 2.23e-16
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 328867300 134 FTLEVIAKHNKRDDCWLLINGKVYNVSSFIEEHPGG-DIILAGAGKDCTTMFElsGMGSD-VYLQMKDYHIGYCD 206
Cdd:PLN02252 520 YTMSEVRKHNSEDSCWIVVHGHVYDCTRFLKDHPGGaDSILINAGTDCTEEFD--AIHSDkAKKMLEDYRIGELV 592
PLN03198 PLN03198
delta6-acyl-lipid desaturase; Provisional
 134-208 8.07e-12

delta6-acyl-lipid desaturase; Provisional


Pssm-ID: 178739 [Multi-domain]  Cd Length: 526  Bit Score: 63.94  E-value: 8.07e-12
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 328867300 134 FTLEVIAKHNKRDDCWLLINGKVYNVSSFIEEHPGGDIILAGAGKDCTTMFElSGMGSDVYLQMKDYHIGYCDHI 208
Cdd:PLN03198 106 HLLSEVAAHNKPNDCWIVIKNKVYDVSDFAAEHPGGSVISTYFGRDGTDAFS-SFHAASTWKILQDFYIGDVDNV 179
PLN03199 PLN03199
delta6-acyl-lipid desaturase-like protein; Provisional
 134-203 2.21e-07

delta6-acyl-lipid desaturase-like protein; Provisional


Pssm-ID: 178740 [Multi-domain]  Cd Length: 485  Bit Score: 50.81  E-value: 2.21e-07
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 328867300 134 FTLEVIAKHNKRDDCWLLINGKVYNVSSFiEEHPGGDIILAGAGKDCTTMF-ELSGMGSDVYlqMKDYHIG 203
Cdd:PLN03199  26 ISWQEVKKHASPDDAWIIHQNKVYDVSNW-HDHPGGAVIFTHAGDDMTDIFaAFHAPGSQAL--MKKFYIG 93
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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