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Conserved domains on  [gi|326478759|gb|EGE02769|]
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phosphotransferase enzyme family protein [Trichophyton equinum CBS 127.97]

Protein Classification

aminoglycoside phosphotransferase family protein( domain architecture ID 10007009)

aminoglycoside phosphotransferase family protein catalyzes the phosphorylation of small molecule substrates such as aminoglycoside antibiotics and N-acetylhexosamine

CATH:  1.10.510.10
Gene Ontology:  GO:0005524|GO:0016310|GO:0016301
PubMed:  16244704

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PKc_like super family cl21453
Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the ...
101-236 5.21e-12

Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the catalytic domains of serine/threonine-specific and tyrosine-specific protein kinases. It also includes RIO kinases, which are atypical serine protein kinases, aminoglycoside phosphotransferases, and choline kinases. These proteins catalyze the transfer of the gamma-phosphoryl group from ATP to hydroxyl groups in specific substrates such as serine, threonine, or tyrosine residues of proteins.


The actual alignment was detected with superfamily member cd05120:

Pssm-ID: 473864 [Multi-domain]  Cd Length: 158  Bit Score: 64.25  E-value: 5.21e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326478759 101 SITKLAEGGFNRVFLLtmNDGFEVIVKIPyllavPQ--KLTTESEVATLDFLRGK-SIPVPKVYA-WSSDkenevGTEYI 176
Cdd:cd05120    2 SVKLIKEGGDNKVYLL--GDPREYVLKIG-----PPrlKKDLEKEAAMLQLLAGKlSLPVPKVYGfGESD-----GWEYL 69
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 326478759 177 IMEKATGKPLTDRWFNITPKEMLKLVTSYVDIEKKLFLFPFAA--HGSLYyketlPQNLRVD 236
Cdd:cd05120   70 LMERIEGETLSEVWPRLSEEEKEKIADQLAEILAALHRIDSSVltHGDLH-----PGNILVK 126
YcbJ COG3173
Predicted kinase, aminoglycoside phosphotransferase (APT) family [General function prediction ...
80-376 1.05e-09

Predicted kinase, aminoglycoside phosphotransferase (APT) family [General function prediction only];


:

Pssm-ID: 442406 [Multi-domain]  Cd Length: 284  Bit Score: 59.74  E-value: 1.05e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326478759  80 EFNVEALKR-IAAKAVDRDSTASITKLAEGGFNRVFLLTmnDGFEVIVKI-PYLLAVPQKLTTESEVatLDFLRGKS-IP 156
Cdd:COG3173    2 ELDEAALRAlLAAQLPGLAGLPEVEPLSGGWSNLTYRLD--TGDRLVLRRpPRGLASAHDVRREARV--LRALAPRLgVP 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326478759 157 VPKVYAWSSDKEnEVGTEYIIMEKATGKPLTDRWFNITPKEMLKLVTSYVDIEKKLflfpfaaHgslyyketlpqnlRVD 236
Cdd:COG3173   78 VPRPLALGEDGE-VIGAPFYVMEWVEGETLEDALPDLSPAERRALARALGEFLAAL-------H-------------AVD 136
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326478759 237 LYSPGeLGDdrfcigpitdymfwrGRRANFDLNRGPWQDHCQYLQSIGERElewtkkfgkplmndfphnalenipreisq 316
Cdd:COG3173  137 PAAAG-LAD---------------GRPEGLERQLARWRAQLRRALARTDDL----------------------------- 171
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 326478759 317 DVYIDLLKKYLSLApyiLPQDPTdpmnkPTLRHPDLNPSNIFVS-EEGEITCLIDWQYATV 376
Cdd:COG3173  172 PALRERLAAWLAAN---LPEWGP-----PVLVHGDLRPGNLLVDpDDGRLTAVIDWELATL 224
PKc_like super family cl21453
Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the ...
349-432 7.47e-03

Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the catalytic domains of serine/threonine-specific and tyrosine-specific protein kinases. It also includes RIO kinases, which are atypical serine protein kinases, aminoglycoside phosphotransferases, and choline kinases. These proteins catalyze the transfer of the gamma-phosphoryl group from ATP to hydroxyl groups in specific substrates such as serine, threonine, or tyrosine residues of proteins.


The actual alignment was detected with superfamily member cd05153:

Pssm-ID: 473864 [Multi-domain]  Cd Length: 300  Bit Score: 38.78  E-value: 7.47e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326478759 349 HPDLNPSNIFVsEEGEITCLIDWQYATVLPLLL---VAGNpPMFDNPDSEPPKDLEKpSLPPDYDT---LSTEEREHADE 422
Cdd:cd05153  183 HADLFRDNVLF-DGDRLSGIIDFYDACYDPLLYdlaIALN-DWCFDDDGKLDPERAK-ALLAGYQSvrpLTEEEKAALPL 259
                         90
                 ....*....|.
gi 326478759 423 LHRQRML-FWL 432
Cdd:cd05153  260 LLRAAALrFWL 270
 
Name Accession Description Interval E-value
APH_ChoK_like cd05120
Aminoglycoside 3'-phosphotransferase and Choline Kinase family; This family is composed of APH, ...
101-236 5.21e-12

Aminoglycoside 3'-phosphotransferase and Choline Kinase family; This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 270690 [Multi-domain]  Cd Length: 158  Bit Score: 64.25  E-value: 5.21e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326478759 101 SITKLAEGGFNRVFLLtmNDGFEVIVKIPyllavPQ--KLTTESEVATLDFLRGK-SIPVPKVYA-WSSDkenevGTEYI 176
Cdd:cd05120    2 SVKLIKEGGDNKVYLL--GDPREYVLKIG-----PPrlKKDLEKEAAMLQLLAGKlSLPVPKVYGfGESD-----GWEYL 69
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 326478759 177 IMEKATGKPLTDRWFNITPKEMLKLVTSYVDIEKKLFLFPFAA--HGSLYyketlPQNLRVD 236
Cdd:cd05120   70 LMERIEGETLSEVWPRLSEEEKEKIADQLAEILAALHRIDSSVltHGDLH-----PGNILVK 126
YcbJ COG3173
Predicted kinase, aminoglycoside phosphotransferase (APT) family [General function prediction ...
80-376 1.05e-09

Predicted kinase, aminoglycoside phosphotransferase (APT) family [General function prediction only];


Pssm-ID: 442406 [Multi-domain]  Cd Length: 284  Bit Score: 59.74  E-value: 1.05e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326478759  80 EFNVEALKR-IAAKAVDRDSTASITKLAEGGFNRVFLLTmnDGFEVIVKI-PYLLAVPQKLTTESEVatLDFLRGKS-IP 156
Cdd:COG3173    2 ELDEAALRAlLAAQLPGLAGLPEVEPLSGGWSNLTYRLD--TGDRLVLRRpPRGLASAHDVRREARV--LRALAPRLgVP 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326478759 157 VPKVYAWSSDKEnEVGTEYIIMEKATGKPLTDRWFNITPKEMLKLVTSYVDIEKKLflfpfaaHgslyyketlpqnlRVD 236
Cdd:COG3173   78 VPRPLALGEDGE-VIGAPFYVMEWVEGETLEDALPDLSPAERRALARALGEFLAAL-------H-------------AVD 136
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326478759 237 LYSPGeLGDdrfcigpitdymfwrGRRANFDLNRGPWQDHCQYLQSIGERElewtkkfgkplmndfphnalenipreisq 316
Cdd:COG3173  137 PAAAG-LAD---------------GRPEGLERQLARWRAQLRRALARTDDL----------------------------- 171
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 326478759 317 DVYIDLLKKYLSLApyiLPQDPTdpmnkPTLRHPDLNPSNIFVS-EEGEITCLIDWQYATV 376
Cdd:COG3173  172 PALRERLAAWLAAN---LPEWGP-----PVLVHGDLRPGNLLVDpDDGRLTAVIDWELATL 224
APH pfam01636
Phosphotransferase enzyme family; This family consists of bacterial antibiotic resistance ...
101-390 2.32e-04

Phosphotransferase enzyme family; This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881.


Pssm-ID: 426359 [Multi-domain]  Cd Length: 239  Bit Score: 42.87  E-value: 2.32e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326478759  101 SITKLAEGGFNRVFLLTMNDGfEVIVKIPYLLAVPQKLttESEVATLDFLRGKSI-PVPKVYAWSSDKENEvGTEYIIME 179
Cdd:pfam01636   1 TLRPISSGASNRTYLVTTGDG-RYVLRLPPPGRAAEEL--RRELALLRHLAAAGVpPVPRVLAGCTDAELL-GLPFLLME 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326478759  180 KATGKPLTDRWFNITPKEMLKlvtsyvdiekklflfpfAAHGSLyyketlpqnLRVDLYSPGELGDDRFcigpitdymfw 259
Cdd:pfam01636  77 YLPGEVLARPLLPEERGALLE-----------------ALGRAL---------ARLHAVDPAALPLAGR----------- 119
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326478759  260 rgRRANFDLNRGPWQDHCQYLQSIGERELEWTKKFgkplmndfphnalenipreisqdvyidLLKKYLSLAPYILPqdpt 339
Cdd:pfam01636 120 --LARLLELLRQLEAALARLLAAELLDRLEELEER---------------------------LLAALLALLPAELP---- 166
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 326478759  340 dpmnkPTLRHPDLNPSNIFVSEEGEITCLIDWQYATVlplllvagNPPMFD 390
Cdd:pfam01636 167 -----PVLVHGDLHPGNLLVDPGGRVSGVIDFEDAGL--------GDPAYD 204
HomoserineK_II cd05153
Type II Homoserine Kinase; This subfamily is composed of unusual homoserine kinases, from a ...
349-432 7.47e-03

Type II Homoserine Kinase; This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a Protein Kinase fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine. The Type II homoserine kinase subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 270702 [Multi-domain]  Cd Length: 300  Bit Score: 38.78  E-value: 7.47e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326478759 349 HPDLNPSNIFVsEEGEITCLIDWQYATVLPLLL---VAGNpPMFDNPDSEPPKDLEKpSLPPDYDT---LSTEEREHADE 422
Cdd:cd05153  183 HADLFRDNVLF-DGDRLSGIIDFYDACYDPLLYdlaIALN-DWCFDDDGKLDPERAK-ALLAGYQSvrpLTEEEKAALPL 259
                         90
                 ....*....|.
gi 326478759 423 LHRQRML-FWL 432
Cdd:cd05153  260 LLRAAALrFWL 270
 
Name Accession Description Interval E-value
APH_ChoK_like cd05120
Aminoglycoside 3'-phosphotransferase and Choline Kinase family; This family is composed of APH, ...
101-236 5.21e-12

Aminoglycoside 3'-phosphotransferase and Choline Kinase family; This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 270690 [Multi-domain]  Cd Length: 158  Bit Score: 64.25  E-value: 5.21e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326478759 101 SITKLAEGGFNRVFLLtmNDGFEVIVKIPyllavPQ--KLTTESEVATLDFLRGK-SIPVPKVYA-WSSDkenevGTEYI 176
Cdd:cd05120    2 SVKLIKEGGDNKVYLL--GDPREYVLKIG-----PPrlKKDLEKEAAMLQLLAGKlSLPVPKVYGfGESD-----GWEYL 69
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 326478759 177 IMEKATGKPLTDRWFNITPKEMLKLVTSYVDIEKKLFLFPFAA--HGSLYyketlPQNLRVD 236
Cdd:cd05120   70 LMERIEGETLSEVWPRLSEEEKEKIADQLAEILAALHRIDSSVltHGDLH-----PGNILVK 126
YcbJ COG3173
Predicted kinase, aminoglycoside phosphotransferase (APT) family [General function prediction ...
80-376 1.05e-09

Predicted kinase, aminoglycoside phosphotransferase (APT) family [General function prediction only];


Pssm-ID: 442406 [Multi-domain]  Cd Length: 284  Bit Score: 59.74  E-value: 1.05e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326478759  80 EFNVEALKR-IAAKAVDRDSTASITKLAEGGFNRVFLLTmnDGFEVIVKI-PYLLAVPQKLTTESEVatLDFLRGKS-IP 156
Cdd:COG3173    2 ELDEAALRAlLAAQLPGLAGLPEVEPLSGGWSNLTYRLD--TGDRLVLRRpPRGLASAHDVRREARV--LRALAPRLgVP 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326478759 157 VPKVYAWSSDKEnEVGTEYIIMEKATGKPLTDRWFNITPKEMLKLVTSYVDIEKKLflfpfaaHgslyyketlpqnlRVD 236
Cdd:COG3173   78 VPRPLALGEDGE-VIGAPFYVMEWVEGETLEDALPDLSPAERRALARALGEFLAAL-------H-------------AVD 136
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326478759 237 LYSPGeLGDdrfcigpitdymfwrGRRANFDLNRGPWQDHCQYLQSIGERElewtkkfgkplmndfphnalenipreisq 316
Cdd:COG3173  137 PAAAG-LAD---------------GRPEGLERQLARWRAQLRRALARTDDL----------------------------- 171
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 326478759 317 DVYIDLLKKYLSLApyiLPQDPTdpmnkPTLRHPDLNPSNIFVS-EEGEITCLIDWQYATV 376
Cdd:COG3173  172 PALRERLAAWLAAN---LPEWGP-----PVLVHGDLRPGNLLVDpDDGRLTAVIDWELATL 224
APH pfam01636
Phosphotransferase enzyme family; This family consists of bacterial antibiotic resistance ...
101-390 2.32e-04

Phosphotransferase enzyme family; This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881.


Pssm-ID: 426359 [Multi-domain]  Cd Length: 239  Bit Score: 42.87  E-value: 2.32e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326478759  101 SITKLAEGGFNRVFLLTMNDGfEVIVKIPYLLAVPQKLttESEVATLDFLRGKSI-PVPKVYAWSSDKENEvGTEYIIME 179
Cdd:pfam01636   1 TLRPISSGASNRTYLVTTGDG-RYVLRLPPPGRAAEEL--RRELALLRHLAAAGVpPVPRVLAGCTDAELL-GLPFLLME 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326478759  180 KATGKPLTDRWFNITPKEMLKlvtsyvdiekklflfpfAAHGSLyyketlpqnLRVDLYSPGELGDDRFcigpitdymfw 259
Cdd:pfam01636  77 YLPGEVLARPLLPEERGALLE-----------------ALGRAL---------ARLHAVDPAALPLAGR----------- 119
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326478759  260 rgRRANFDLNRGPWQDHCQYLQSIGERELEWTKKFgkplmndfphnalenipreisqdvyidLLKKYLSLAPYILPqdpt 339
Cdd:pfam01636 120 --LARLLELLRQLEAALARLLAAELLDRLEELEER---------------------------LLAALLALLPAELP---- 166
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 326478759  340 dpmnkPTLRHPDLNPSNIFVSEEGEITCLIDWQYATVlplllvagNPPMFD 390
Cdd:pfam01636 167 -----PVLVHGDLHPGNLLVDPGGRVSGVIDFEDAGL--------GDPAYD 204
CotS COG0510
Thiamine kinase or a related kinase [Coenzyme transport and metabolism];
312-390 2.33e-04

Thiamine kinase or a related kinase [Coenzyme transport and metabolism];


Pssm-ID: 440276 [Multi-domain]  Cd Length: 156  Bit Score: 41.69  E-value: 2.33e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 326478759 312 REISQDVYIDLLKKYLSLAPYiLPQDPTDPmnkpTLRHPDLNPSNIFVSEEGEItCLIDWQYATVlplllvagNPPMFD 390
Cdd:COG0510   21 LALGPRDLPELLRRLEELERA-LAARPLPL----VLCHGDLHPGNFLVTDDGRL-YLIDWEYAGL--------GDPAFD 85
ACAD10_11_N-like cd05154
N-terminal domain of Acyl-CoA dehydrogenase (ACAD) 10 and 11, and similar proteins; This ...
143-376 1.77e-03

N-terminal domain of Acyl-CoA dehydrogenase (ACAD) 10 and 11, and similar proteins; This subfamily is composed of the N-terminal domains of vertebrate ACAD10 and ACAD11, and similar uncharacterized bacterial and eukaryotic proteins. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 are both significantly expressed in human brain tissues. They contain a long N-terminal domain with similarity to phosphotransferases with a Protein Kinase fold, which is absent in other ACADs. They may exhibit multiple functions in acyl-CoA oxidation pathways. ACAD11 utilizes substrates with carbon chain lengths of 20 to 26, with optimal activity towards C22CoA. ACAD10 may be associated with an increased risk in type II diabetes. The ACAD10/11-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 270703 [Multi-domain]  Cd Length: 254  Bit Score: 40.29  E-value: 1.77e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326478759 143 EVATLDFLRGKSIPVPKVYAWSSDkENEVGTEYIIMEKATGKPLTDR--WFNITPKEMLKLVTSYVDIekklflfpFAA- 219
Cdd:cd05154   48 EYRVLRALAGTGVPVPRVLALCED-PSVLGAPFYVMERVDGRVLPDPlpRPDLSPEERRALARSLVDA--------LAAl 118
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326478759 220 HgslyyketlpqnlRVDlysPGELGDDRFCIGPitdymfwrgrranfdlnrGPWQDHCQYLqsigERELEWTKKFGKPLM 299
Cdd:cd05154  119 H-------------SVD---PAALGLADLGRPE------------------GYLERQVDRW----RRQLEAAATDPPPAL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326478759 300 NDfphnAL----ENIPREisqdvyidllkkylslapyilpqdptdpmNKPTLRHPDLNPSNIFVSEEGEITCLIDWQYAT 375
Cdd:cd05154  161 EE----ALrwlrANLPAD-----------------------------GRPVLVHGDFRLGNLLFDPDGRVTAVLDWELAT 207

                 .
gi 326478759 376 V 376
Cdd:cd05154  208 L 208
HomoserineK_II cd05153
Type II Homoserine Kinase; This subfamily is composed of unusual homoserine kinases, from a ...
349-432 7.47e-03

Type II Homoserine Kinase; This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a Protein Kinase fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine. The Type II homoserine kinase subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 270702 [Multi-domain]  Cd Length: 300  Bit Score: 38.78  E-value: 7.47e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 326478759 349 HPDLNPSNIFVsEEGEITCLIDWQYATVLPLLL---VAGNpPMFDNPDSEPPKDLEKpSLPPDYDT---LSTEEREHADE 422
Cdd:cd05153  183 HADLFRDNVLF-DGDRLSGIIDFYDACYDPLLYdlaIALN-DWCFDDDGKLDPERAK-ALLAGYQSvrpLTEEEKAALPL 259
                         90
                 ....*....|.
gi 326478759 423 LHRQRML-FWL 432
Cdd:cd05153  260 LLRAAALrFWL 270
APH cd05150
Aminoglycoside 3'-phosphotransferase; APH catalyzes the transfer of the gamma-phosphoryl group ...
143-202 8.53e-03

Aminoglycoside 3'-phosphotransferase; APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibiotics. The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).


Pssm-ID: 270699 [Multi-domain]  Cd Length: 244  Bit Score: 38.33  E-value: 8.53e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 326478759 143 EVATLDFLRGKsIPVPKVYAWSSDKenevGTEYIIMEKATGKPLTDRWFNITPKEMLKLV 202
Cdd:cd05150   41 EAERLRWLAGK-LPVPEVLDYGSDD----GGDWLLTTALPGRDAASLEPLLDPERLVDLL 95
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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