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Conserved domains on  [gi|321467420|gb|EFX78410|]
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hypothetical protein DAPPUDRAFT_305151 [Daphnia pulex]

Protein Classification

glycosyltransferase family protein( domain architecture ID 581341)

glycosyltransferase family protein may synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Glyco_transf_90 super family cl23835
Glycosyl transferase family 90; This family of glycosyl transferases are specifically ...
 85-407 3.18e-115

Glycosyl transferase family 90; This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-.


The actual alignment was detected with superfamily member pfam05686:

Pssm-ID: 329112  Cd Length: 396  Bit Score: 342.15  E-value: 3.18e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 321467420   85 NCSCFTNLVIEDLKAFKDVGITKSMLDKAKDR-GTKYQIIGQKLYRESF-CLFPSR----CAGIEHFILKVIKDLPDMEL 158
Cdd:pfam05686   5 TCPDYFRWIHEDLEPWRETGITREMVERAKRKaHFRYVIINGRVYVETYgESFQTRdvftIWGILQLLRKYPGRLPDLEL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 321467420  159 IINNRDWPQVSRHFGEVL-----PILSFSKTKEYLDITYPAWTFWeGGPAIslyprGLGRWDQHRISIDKVAATYPWNEK 233
Cdd:pfam05686  85 MFNCGDWPVVKKRDYRGPnanppPLFSYCGDDDTLDIVFPDWSFW-GWPEV-----NIGRWDLLRKDLKEGNTRVKWEDR 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 321467420  234 QSKAFFRGSRTSSE-RDPLILLSRGNLNLVDAQYTKNqawksDSDTLGAPPAEEVSLESHCSYKYLFNYRGVAASFRFKH 312
Cdd:pfam05686 159 EPYAYWRGNPSVAEtRLELVKCNRSNPEDWDARLTNQ-----DWDTEYRPGFKHSSLVDQCTHKYKIYIEGVAWSVSLKY 233

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 321467420  313 LFLCKSLVFHVGDEWIEFFYPALKPWVHYIPVSSAATQRDLARLIRFAKENDSLVSKIATRGHQLVWNHLKLSDVECYWK 392
Cdd:pfam05686 234 ILACDSLVLHVGPEYYDFFYRGLKPWVHYWPIKSDDDCRDLKEAVDWGNAHDDEAQKIAERGSEFIRENLKMDDVYDYMF 313

                         330
                  ....*....|....*
gi 321467420  393 FLLTEYAKLLRFKPQ 407
Cdd:pfam05686 314 HLLTEYAKLLKYKPT 328
 
Name Accession Description Interval E-value
Glyco_transf_90 pfam05686
Glycosyl transferase family 90; This family of glycosyl transferases are specifically ...
 85-407 3.18e-115

Glycosyl transferase family 90; This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-.


Pssm-ID: 310354  Cd Length: 396  Bit Score: 342.15  E-value: 3.18e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 321467420   85 NCSCFTNLVIEDLKAFKDVGITKSMLDKAKDR-GTKYQIIGQKLYRESF-CLFPSR----CAGIEHFILKVIKDLPDMEL 158
Cdd:pfam05686   5 TCPDYFRWIHEDLEPWRETGITREMVERAKRKaHFRYVIINGRVYVETYgESFQTRdvftIWGILQLLRKYPGRLPDLEL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 321467420  159 IINNRDWPQVSRHFGEVL-----PILSFSKTKEYLDITYPAWTFWeGGPAIslyprGLGRWDQHRISIDKVAATYPWNEK 233
Cdd:pfam05686  85 MFNCGDWPVVKKRDYRGPnanppPLFSYCGDDDTLDIVFPDWSFW-GWPEV-----NIGRWDLLRKDLKEGNTRVKWEDR 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 321467420  234 QSKAFFRGSRTSSE-RDPLILLSRGNLNLVDAQYTKNqawksDSDTLGAPPAEEVSLESHCSYKYLFNYRGVAASFRFKH 312
Cdd:pfam05686 159 EPYAYWRGNPSVAEtRLELVKCNRSNPEDWDARLTNQ-----DWDTEYRPGFKHSSLVDQCTHKYKIYIEGVAWSVSLKY 233

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 321467420  313 LFLCKSLVFHVGDEWIEFFYPALKPWVHYIPVSSAATQRDLARLIRFAKENDSLVSKIATRGHQLVWNHLKLSDVECYWK 392
Cdd:pfam05686 234 ILACDSLVLHVGPEYYDFFYRGLKPWVHYWPIKSDDDCRDLKEAVDWGNAHDDEAQKIAERGSEFIRENLKMDDVYDYMF 313

                         330
                  ....*....|....*
gi 321467420  393 FLLTEYAKLLRFKPQ 407
Cdd:pfam05686 314 HLLTEYAKLLKYKPT 328
CAP10 smart00672
Putative lipopolysaccharide-modifying enzyme;
153-405 1.68e-91

Putative lipopolysaccharide-modifying enzyme;


Pssm-ID: 214773  Cd Length: 256  Bit Score: 276.61  E-value: 1.68e-91
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 321467420   153 LPDMELIINNRDWPQVSRHFGEVL------PILSFSKTKEYLDITYPAWTFWEGgpaislYPRGLGR-WDQHRISIDKVA 225
Cdd:smart00672   2 VPDLELMFNCRDWPLINKKSFASYnqhappPLFSYCGSDEYLDIVFPDWSFWAG------WPEVNGRpWDKDLMELEEGN 75

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 321467420   226 ATYPWNEKQSKAFFRGSRTS-SERDPLILLSRGNLNLVDAQYTKNQAWKSDSDTLGAPPAEEVSLESHCSYKYLFNYRGV 304
Cdd:smart00672  76 KRTKWSDKNAYAYWRGNPTVaSERLDLIKCNQSSPELVNARITIQDWPGKCDGEEDAPGFKKSPLEEQCKHKYKINIEGV 155

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 321467420   305 AASFRFKHLFLCKSLVFHVGDEWIEFFYPALKPWVHYIPVSSAATQRDLARLIRFAKENDSLVSKIATRGHQLVWNHLKL 384
Cdd:smart00672 156 AWSVRLKYILACDSVVLKVKPEYYEFFSRGLQPWVHYWPIKSDLSCRELKEAVDWGNEHDKKAQEIGKRGSEFIQQNLSM 235

                          250       260
                   ....*....|....*....|.
gi 321467420   385 SDVECYWKFLLTEYAKLLRFK 405
Cdd:smart00672 236 EDVYDYMFHLLQEYAKLLKYK 256
 
Name Accession Description Interval E-value
Glyco_transf_90 pfam05686
Glycosyl transferase family 90; This family of glycosyl transferases are specifically ...
 85-407 3.18e-115

Glycosyl transferase family 90; This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-.


Pssm-ID: 310354  Cd Length: 396  Bit Score: 342.15  E-value: 3.18e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 321467420   85 NCSCFTNLVIEDLKAFKDVGITKSMLDKAKDR-GTKYQIIGQKLYRESF-CLFPSR----CAGIEHFILKVIKDLPDMEL 158
Cdd:pfam05686   5 TCPDYFRWIHEDLEPWRETGITREMVERAKRKaHFRYVIINGRVYVETYgESFQTRdvftIWGILQLLRKYPGRLPDLEL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 321467420  159 IINNRDWPQVSRHFGEVL-----PILSFSKTKEYLDITYPAWTFWeGGPAIslyprGLGRWDQHRISIDKVAATYPWNEK 233
Cdd:pfam05686  85 MFNCGDWPVVKKRDYRGPnanppPLFSYCGDDDTLDIVFPDWSFW-GWPEV-----NIGRWDLLRKDLKEGNTRVKWEDR 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 321467420  234 QSKAFFRGSRTSSE-RDPLILLSRGNLNLVDAQYTKNqawksDSDTLGAPPAEEVSLESHCSYKYLFNYRGVAASFRFKH 312
Cdd:pfam05686 159 EPYAYWRGNPSVAEtRLELVKCNRSNPEDWDARLTNQ-----DWDTEYRPGFKHSSLVDQCTHKYKIYIEGVAWSVSLKY 233

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 321467420  313 LFLCKSLVFHVGDEWIEFFYPALKPWVHYIPVSSAATQRDLARLIRFAKENDSLVSKIATRGHQLVWNHLKLSDVECYWK 392
Cdd:pfam05686 234 ILACDSLVLHVGPEYYDFFYRGLKPWVHYWPIKSDDDCRDLKEAVDWGNAHDDEAQKIAERGSEFIRENLKMDDVYDYMF 313

                         330
                  ....*....|....*
gi 321467420  393 FLLTEYAKLLRFKPQ 407
Cdd:pfam05686 314 HLLTEYAKLLKYKPT 328
CAP10 smart00672
Putative lipopolysaccharide-modifying enzyme;
153-405 1.68e-91

Putative lipopolysaccharide-modifying enzyme;


Pssm-ID: 214773  Cd Length: 256  Bit Score: 276.61  E-value: 1.68e-91
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 321467420   153 LPDMELIINNRDWPQVSRHFGEVL------PILSFSKTKEYLDITYPAWTFWEGgpaislYPRGLGR-WDQHRISIDKVA 225
Cdd:smart00672   2 VPDLELMFNCRDWPLINKKSFASYnqhappPLFSYCGSDEYLDIVFPDWSFWAG------WPEVNGRpWDKDLMELEEGN 75

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 321467420   226 ATYPWNEKQSKAFFRGSRTS-SERDPLILLSRGNLNLVDAQYTKNQAWKSDSDTLGAPPAEEVSLESHCSYKYLFNYRGV 304
Cdd:smart00672  76 KRTKWSDKNAYAYWRGNPTVaSERLDLIKCNQSSPELVNARITIQDWPGKCDGEEDAPGFKKSPLEEQCKHKYKINIEGV 155

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 321467420   305 AASFRFKHLFLCKSLVFHVGDEWIEFFYPALKPWVHYIPVSSAATQRDLARLIRFAKENDSLVSKIATRGHQLVWNHLKL 384
Cdd:smart00672 156 AWSVRLKYILACDSVVLKVKPEYYEFFSRGLQPWVHYWPIKSDLSCRELKEAVDWGNEHDKKAQEIGKRGSEFIQQNLSM 235

                          250       260
                   ....*....|....*....|.
gi 321467420   385 SDVECYWKFLLTEYAKLLRFK 405
Cdd:smart00672 236 EDVYDYMFHLLQEYAKLLKYK 256
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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