|
Name |
Accession |
Description |
Interval |
E-value |
| PRK08581 |
PRK08581 |
amidase domain-containing protein; |
1-619 |
0e+00 |
|
amidase domain-containing protein;
Pssm-ID: 236304 [Multi-domain] Cd Length: 619 Bit Score: 834.82 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 1 MPKNKILIYLLSTTLVLPTLVSPTAYADTPQKDTTAKTTSHDSKKSNDDETSKDTTSKDIDKADKNNTSNQDNNDKKFKT 80
Cdd:PRK08581 1 MKKNKILIYLLSTTLVLPTLTSPTAYADDPQKDSTAKTTSHDSKKSNDDETSKDTSSKDTDKADNNNTSNQDNNDKKFST 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 81 IDDSTSDSNNIIDFIYKNLPQTNINQLLTKNKYDDNYSLTTLIQNLFNLNSDISDYEQPRNGEKSTNDSNKNSDNSIKND 160
Cdd:PRK08581 81 IDSSTSDSNNIIDFIYKNLPQTNINQLLTKNKYDDNYSLTTLIQNLFNLNSDISDYEQPRNSEKSTNDSNKNSDSSIKND 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 161 TDTQSSKQDKADNQKAPKSNNTKPSTSNKQPNSPKPTQPNQSNSQPASDDKANQKSSSKDNQSMSDSALDSILDQYSEDA 240
Cdd:PRK08581 161 TDTQSSKQDKADNQKAPSSNNTKPSTSNKQPNSPKPTQPNQSNSQPASDDTANQKSSSKDNQSMSDSALDSILDQYSEDA 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 241 KKAQKDYASQSKKDKNEKSNTKNPQLPTQDELKHKSKPAQSFNNDVNQKDTRATSLFETDPSISNNDDSGQFNVVDSKDT 320
Cdd:PRK08581 241 KKTQKDYASQSKKDKTETSNTKNPQLPTQDELKHKSKPAQSFENDVNQSNTRSTSLFETGPSLSNNDDSGSFNVVDSKDT 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 321 RQFVKSIAKDAHRIGQDNDIYASVMIAQAILESDSGRSALAKSPNHNLFGIKGAFEGNSVPFNTLEADGNQLYSINAGFR 400
Cdd:PRK08581 321 RQFIKSIAKDAHRIGQDNDIYASVMIAQAILESDSGQSALAKSPNHNLFGIKGAYEGNSVSFNTLEADGNQLYSINAGFR 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 401 KYPSTKESLKDYSDLIKNGIDGNRTIYKPTWKSEADSYKDATSHLSKTYATDPNYAKKLNSIIKHYQLTQFDDERMPDLD 480
Cdd:PRK08581 401 KYPSTKESLEDYADLIKNGIDGNSTIYKPTWKSEAKSYKDATSHLSKTYATDPNYAKKLNSIIKHYNLTQFDDEKMPDLD 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 481 KYERSIKDYDDSSDEFKPFREVSDSMPYPHGQCTWYVYNRMKQFGTSISGDLGDAHNWNNRAQYRDYQVSHTPKRHAAVV 560
Cdd:PRK08581 481 KYESSIKDYDDSSSEFKPFREYSGSSPYPHGQCTWYVYNRMKQFGTSISGDLGDAHNWNNRAQARGYQVSHTPKRHAAVV 560
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*....
gi 320144280 561 FEAGQFGADQHYGHVAFVEKVNSDGSIVISESNVKGLGIISHRTINAAAAEELSYITGK 619
Cdd:PRK08581 561 FEAGQAGADQHYGHVAFVEKVNSDGSIVISESNVKGLGIISYRTIDAAAAEELSYITGK 619
|
|
| FlgJ |
COG1705 |
Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell ... |
201-470 |
1.29e-50 |
|
Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility];
Pssm-ID: 441311 [Multi-domain] Cd Length: 276 Bit Score: 176.31 E-value: 1.29e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 201 QSNSQPASDDKANQKSSSKDNQSMSDSALDSILDQYSEDAKKAQKDYASQSKKDKNEKSNTKNPQLPTQDELKHKSKPAQ 280
Cdd:COG1705 13 AGAAAQAKAAAQAAASAMASLEAAASSALSSSTSSSSKGASSSQSLEGLASALGGGASALSSAAALALKSAAKSATEAGG 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 281 SFNNDVNQKDTRATSLFETDPSISNnddSGQFNVVDSKDTRQFVKSIAKDAHRIGQDNDIYASVMIAQAILESDSGRSAL 360
Cdd:COG1705 93 GLASANAAATSAAALAASLSGAAAL---AASATAAASASPEEFIAKIAPAAQKAAKKYGVPASVLIAQAALESGWGKSEL 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 361 AKSPNHNLFGIKGA--FEGNSVPFNTLEADGNQLYSINAGFRKYPSTKESLKDYSDLIKNgidGNRtiYKPTWKsEADSY 438
Cdd:COG1705 170 DGSPSNNLFGIKAGgsWQGKSVEVTTTEYVNGKAVKIKARFRAYDSYAESFRDYARLLKN---NPR--YAGALA-NAKDY 243
|
250 260 270
....*....|....*....|....*....|...
gi 320144280 439 KDATSHLSK-TYATDPNYAKKLNSIIKHYQLTQ 470
Cdd:COG1705 244 EAFAKALQKaGYATDPKYADKLISIIESYNLTQ 276
|
|
| LYZ2 |
smart00047 |
Lysozyme subfamily 2; Eubacterial enzymes distantly related to eukaryotic lysozymes. |
317-472 |
1.76e-32 |
|
Lysozyme subfamily 2; Eubacterial enzymes distantly related to eukaryotic lysozymes.
Pssm-ID: 214488 [Multi-domain] Cd Length: 147 Bit Score: 122.16 E-value: 1.76e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 317 SKDTRQFVKSIAKDAHRIGQDNDIYASVMIAQAILESDSGRSALAKsPNHNLFGIKGAFEGNSVPFNTLEADGNQLYSIN 396
Cdd:smart00047 5 GGSTLEFVGKIFNEAQKAYQINGVYPSILIAQAALESGWGTSKLAK-KYNNLFGIKGAYDGRPVRMGTLEYLNGGWVTVK 83
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 320144280 397 AGFRKYPSTKESLKDYSDLikngidGNRTIYKPTWKSEADsykdatshLSKTYATDPNYAKKLNSIIKHY--QLTQFD 472
Cdd:smart00047 84 AAFRGYFGEKFIDYAYVLR------GQNPLYKKRWGSNAL--------QTAGYATDPDYAKKLIRIIALYdeKLKGYD 147
|
|
| CHAP |
pfam05257 |
CHAP domain; This domain corresponds to an amidase function. Many of these proteins are ... |
504-593 |
3.15e-26 |
|
CHAP domain; This domain corresponds to an amidase function. Many of these proteins are involved in cell wall metabolism of bacteria. This domain is found at the N-terminus of Swiss:P43675, where it functions as a glutathionylspermidine amidase EC:3.5.1.78. This domain is found to be the catalytic domain of PlyCA. CHAP is the amidase domain of bifunctional Escherichia coli glutathionylspermidine synthetase/amidase, and it catalyzes the hydrolysis of Gsp (glutathionylspermidine) into glutathione and spermidine.
Pssm-ID: 461605 [Multi-domain] Cd Length: 83 Bit Score: 102.11 E-value: 3.15e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 504 DSMPYPHGQCTWYVYNRMKQFGtsisGDLGDAHNWNNRAQyRDYQVSH-TPKRHAAVVFEAGQFGADqhYGHVAFVEKVN 582
Cdd:pfam05257 1 YGNGYPWGQCTWFVYWRVAQLG----IYLGNAGDWADAAA-GAYKVGStTPKVGDIVVFDPGGGGAS--YGHVAIVEKVN 73
|
90
....*....|.
gi 320144280 583 sDGSIVISESN 593
Cdd:pfam05257 74 -DGSITVSEQN 83
|
|
| sporang_Gsm |
NF038016 |
sporangiospore maturation cell wall hydrolase GsmA; The peptidoglycan-hydrolyzing enzyme GsmA ... |
320-472 |
8.40e-22 |
|
sporangiospore maturation cell wall hydrolase GsmA; The peptidoglycan-hydrolyzing enzyme GsmA occurs in some sporangia-forming members of the Actinobacteria, such as Actinoplanes missouriensis, and is required for proper separation of spores. GsmA proteins have one or two SH3 domains N-terminal to the hydrolase domain.
Pssm-ID: 411609 [Multi-domain] Cd Length: 312 Bit Score: 96.35 E-value: 8.40e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 320 TRQFVKSIAKDAHRIGQDNDIYASVMIAQAILESDSGRSALAKSpNHNLFGIK-----GAFEGNSVPFNTLEADGNQ-LY 393
Cdd:NF038016 160 PAQFIAAVAPPAQQSQRATGVPASVTIAQAILESGWGRSGLTRE-DHNYFGIKcfgspGPIAVGCRSYATFECSPTGgCF 238
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 320144280 394 SINAGFRKYPSTKESLKDYSDLIKNgidGNRtiYKPTWKSEADSYKDATSHLSKTYATDPNYAKKLNSIIKHYQLTQFD 472
Cdd:NF038016 239 DTTATFRAYASAADSFRDHGRFLSV---NSR--YAPAFAYTDDPDQFAREIHKAGYATDPTYADKLIGLMKQYNLYQYD 312
|
|
| flagell_FlgJ |
TIGR02541 |
flagellar rod assembly protein/muramidase FlgJ; The N-terminal region of this protein acts ... |
319-463 |
2.35e-17 |
|
flagellar rod assembly protein/muramidase FlgJ; The N-terminal region of this protein acts directly in flagellar rod assembly. The C-terminal region is a flagellum-specific muramidase (peptidoglycan hydrolase) required for formation of the outer membrane L ring.
Pssm-ID: 274188 [Multi-domain] Cd Length: 294 Bit Score: 82.98 E-value: 2.35e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 319 DTRQFVKSIAKDAHRIGQDNDIYASVMIAQAILESDSGRSALAK---SPNHNLFGIK--GAFEGNSVPFNTLEADGNQLY 393
Cdd:TIGR02541 147 HPKSFVNSMLPHARKAAQQLGVPPHLILAQAALESGWGQRQIRNadgSPSYNLFGIKasGSWQGKVVTTMTTEYVDGVAQ 226
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 394 SINAGFRKYPSTKESLKDYSDLIKNGidgnrTIYKPTWKSeADSYKDATSHLSKTYATDPNYAKKLNSII 463
Cdd:TIGR02541 227 KLTAKFRSYSSYEEAFSDYARLLNNN-----PRYEAVLQQ-RSAESFARGLQRAGYATDPRYARKLLQVI 290
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
22-322 |
1.50e-05 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 48.37 E-value: 1.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 22 SPTAYADTPQKDTTAKTTSHDSKKSNDDETSKDTTSKDIDKADKNNTSNQDNNDKKFKTIDDSTSDSNNIIDFIYKNLPQ 101
Cdd:NF033609 596 SDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 675
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 102 TNINQLLTKNKYDDNYSLTTLIQNLFNLNSDISDYEQPRNGEkSTNDSNKNSDNSIKNDTDTQSSKQDKADNQKAPKSNN 181
Cdd:NF033609 676 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD-SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 754
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 182 TKPSTSNKQPNSPKPTQPNQSNSQPASDDKANQKSSSKDNQSMSDSALDSILDQYSEDAKKAQKDYASQSKKDKNEKSNT 261
Cdd:NF033609 755 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 834
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 320144280 262 KNPQLPTQDELKHKSKPAQSFNNDVNQKDTRATSLFETDPSISNNDDSGQFNVVDSKDTRQ 322
Cdd:NF033609 835 DSDSDSDSDSDSDSDSDSDSDSESDSNSDSESGSNNNVVPPNSPKNGTNASNKNEAKDSKE 895
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
27-365 |
7.06e-05 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 46.06 E-value: 7.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 27 ADTPQKDTTAKTTSHDSKKSNDDETSKDTTSKDIDKADKNNTSNQDNNDKKFKTIDDSTSDSNNIIDFiyknlpqtninq 106
Cdd:NF033609 571 SDSSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSAS------------ 638
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 107 lltknkyddnyslttliqnlfNLNSDISDYEQPRNGEKSTNDSNKNSDNSIKNDTDTQSSKQDKADNQKAPKSNNTKPST 186
Cdd:NF033609 639 ---------------------DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 697
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 187 SNKQPNSPKPTQPNQSNSQPASDDKANQKSSSKDNQSMSDSALDSILDQYSEDAKKAQKDYASQSKKDKNEKSNTKNPQL 266
Cdd:NF033609 698 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 777
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 267 PTQDELKHKSKPAQSFNNDVNQKDTRATSLFETDPSISNNDDSGQFNVVDSKDTRQFVKSIAKDAHRIGQDNDIYASVMI 346
Cdd:NF033609 778 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSE 857
|
330
....*....|....*....
gi 320144280 347 AQAILESDSGRSALAKSPN 365
Cdd:NF033609 858 SDSNSDSESGSNNNVVPPN 876
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK08581 |
PRK08581 |
amidase domain-containing protein; |
1-619 |
0e+00 |
|
amidase domain-containing protein;
Pssm-ID: 236304 [Multi-domain] Cd Length: 619 Bit Score: 834.82 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 1 MPKNKILIYLLSTTLVLPTLVSPTAYADTPQKDTTAKTTSHDSKKSNDDETSKDTTSKDIDKADKNNTSNQDNNDKKFKT 80
Cdd:PRK08581 1 MKKNKILIYLLSTTLVLPTLTSPTAYADDPQKDSTAKTTSHDSKKSNDDETSKDTSSKDTDKADNNNTSNQDNNDKKFST 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 81 IDDSTSDSNNIIDFIYKNLPQTNINQLLTKNKYDDNYSLTTLIQNLFNLNSDISDYEQPRNGEKSTNDSNKNSDNSIKND 160
Cdd:PRK08581 81 IDSSTSDSNNIIDFIYKNLPQTNINQLLTKNKYDDNYSLTTLIQNLFNLNSDISDYEQPRNSEKSTNDSNKNSDSSIKND 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 161 TDTQSSKQDKADNQKAPKSNNTKPSTSNKQPNSPKPTQPNQSNSQPASDDKANQKSSSKDNQSMSDSALDSILDQYSEDA 240
Cdd:PRK08581 161 TDTQSSKQDKADNQKAPSSNNTKPSTSNKQPNSPKPTQPNQSNSQPASDDTANQKSSSKDNQSMSDSALDSILDQYSEDA 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 241 KKAQKDYASQSKKDKNEKSNTKNPQLPTQDELKHKSKPAQSFNNDVNQKDTRATSLFETDPSISNNDDSGQFNVVDSKDT 320
Cdd:PRK08581 241 KKTQKDYASQSKKDKTETSNTKNPQLPTQDELKHKSKPAQSFENDVNQSNTRSTSLFETGPSLSNNDDSGSFNVVDSKDT 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 321 RQFVKSIAKDAHRIGQDNDIYASVMIAQAILESDSGRSALAKSPNHNLFGIKGAFEGNSVPFNTLEADGNQLYSINAGFR 400
Cdd:PRK08581 321 RQFIKSIAKDAHRIGQDNDIYASVMIAQAILESDSGQSALAKSPNHNLFGIKGAYEGNSVSFNTLEADGNQLYSINAGFR 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 401 KYPSTKESLKDYSDLIKNGIDGNRTIYKPTWKSEADSYKDATSHLSKTYATDPNYAKKLNSIIKHYQLTQFDDERMPDLD 480
Cdd:PRK08581 401 KYPSTKESLEDYADLIKNGIDGNSTIYKPTWKSEAKSYKDATSHLSKTYATDPNYAKKLNSIIKHYNLTQFDDEKMPDLD 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 481 KYERSIKDYDDSSDEFKPFREVSDSMPYPHGQCTWYVYNRMKQFGTSISGDLGDAHNWNNRAQYRDYQVSHTPKRHAAVV 560
Cdd:PRK08581 481 KYESSIKDYDDSSSEFKPFREYSGSSPYPHGQCTWYVYNRMKQFGTSISGDLGDAHNWNNRAQARGYQVSHTPKRHAAVV 560
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*....
gi 320144280 561 FEAGQFGADQHYGHVAFVEKVNSDGSIVISESNVKGLGIISHRTINAAAAEELSYITGK 619
Cdd:PRK08581 561 FEAGQAGADQHYGHVAFVEKVNSDGSIVISESNVKGLGIISYRTIDAAAAEELSYITGK 619
|
|
| FlgJ |
COG1705 |
Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell ... |
201-470 |
1.29e-50 |
|
Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility];
Pssm-ID: 441311 [Multi-domain] Cd Length: 276 Bit Score: 176.31 E-value: 1.29e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 201 QSNSQPASDDKANQKSSSKDNQSMSDSALDSILDQYSEDAKKAQKDYASQSKKDKNEKSNTKNPQLPTQDELKHKSKPAQ 280
Cdd:COG1705 13 AGAAAQAKAAAQAAASAMASLEAAASSALSSSTSSSSKGASSSQSLEGLASALGGGASALSSAAALALKSAAKSATEAGG 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 281 SFNNDVNQKDTRATSLFETDPSISNnddSGQFNVVDSKDTRQFVKSIAKDAHRIGQDNDIYASVMIAQAILESDSGRSAL 360
Cdd:COG1705 93 GLASANAAATSAAALAASLSGAAAL---AASATAAASASPEEFIAKIAPAAQKAAKKYGVPASVLIAQAALESGWGKSEL 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 361 AKSPNHNLFGIKGA--FEGNSVPFNTLEADGNQLYSINAGFRKYPSTKESLKDYSDLIKNgidGNRtiYKPTWKsEADSY 438
Cdd:COG1705 170 DGSPSNNLFGIKAGgsWQGKSVEVTTTEYVNGKAVKIKARFRAYDSYAESFRDYARLLKN---NPR--YAGALA-NAKDY 243
|
250 260 270
....*....|....*....|....*....|...
gi 320144280 439 KDATSHLSK-TYATDPNYAKKLNSIIKHYQLTQ 470
Cdd:COG1705 244 EAFAKALQKaGYATDPKYADKLISIIESYNLTQ 276
|
|
| COG3942 |
COG3942 |
Surface antigen [Cell wall/membrane/envelope biogenesis]; |
498-619 |
2.35e-49 |
|
Surface antigen [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443142 [Multi-domain] Cd Length: 129 Bit Score: 167.86 E-value: 2.35e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 498 PFREVSDSMPYPHGQCTWYVYNRMKQFGTSISGDLGDAHNWNNRAQYRDYQVSHTPKRHAAVVFEAGQFGAdqhYGHVAF 577
Cdd:COG3942 11 PPNVVDPWNGYPYGQCTWYAAWRRAQLGGPIGSGWGNANNWADNARAAGYTVGSTPKVGAVAVFTPGVAGP---YGHVAV 87
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 320144280 578 VEKVNSDGSIVISESNVKGLGIISHRTINAAAAEELSYITGK 619
Cdd:COG3942 88 VESVNSDGSILVSEMNWGGPGIYSTRTISAGNASSYGFIHPK 129
|
|
| PRK06347 |
PRK06347 |
1,4-beta-N-acetylmuramoylhydrolase; |
234-472 |
6.23e-42 |
|
1,4-beta-N-acetylmuramoylhydrolase;
Pssm-ID: 180536 [Multi-domain] Cd Length: 592 Bit Score: 160.25 E-value: 6.23e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 234 DQYSEDAKKAQKDYASQSKKDKNEKSNTKNPQlptQDELKHKSKPAQSFNNDVNQKDTRATSlfetDPSISNNDDS---- 309
Cdd:PRK06347 59 DEASKSAEANTTKEAPATATPENTTEPTVEPK---QTETKEQTKTPEEKQPAAKQVEKAPAE----PATVSNPDNAtsss 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 310 --GQFNVVDSKDTRQ------FVKSIAKDAHRIGQDNDIYASVMIAQAILESDSGRSALAKSPNHNLFGIKGAFEGNSVP 381
Cdd:PRK06347 132 tpATYNLLQKSALRSgatvqsFIQTIQASSSQIAAENDLYASVMIAQAILESAYGTSELGSAPNYNLFGIKGAYNGQSYT 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 382 FNTLEADGN-QLYSINAGFRKYPSTKESLKDYSDLIKNGIDGNRTIYKPTWKSEADSYKDATSHLSKTYATDPNYAKKLN 460
Cdd:PRK06347 212 KQTLEDDGKgNYYTITAKFRKYPSYHQSLEDYAQVIRKGPSWNPNYYSKVWKSNTTSYKDATKALTGTYATDTAYATKLN 291
|
250
....*....|..
gi 320144280 461 SIIKHYQLTQFD 472
Cdd:PRK06347 292 DLISRYNLTQYD 303
|
|
| LYZ2 |
smart00047 |
Lysozyme subfamily 2; Eubacterial enzymes distantly related to eukaryotic lysozymes. |
317-472 |
1.76e-32 |
|
Lysozyme subfamily 2; Eubacterial enzymes distantly related to eukaryotic lysozymes.
Pssm-ID: 214488 [Multi-domain] Cd Length: 147 Bit Score: 122.16 E-value: 1.76e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 317 SKDTRQFVKSIAKDAHRIGQDNDIYASVMIAQAILESDSGRSALAKsPNHNLFGIKGAFEGNSVPFNTLEADGNQLYSIN 396
Cdd:smart00047 5 GGSTLEFVGKIFNEAQKAYQINGVYPSILIAQAALESGWGTSKLAK-KYNNLFGIKGAYDGRPVRMGTLEYLNGGWVTVK 83
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 320144280 397 AGFRKYPSTKESLKDYSDLikngidGNRTIYKPTWKSEADsykdatshLSKTYATDPNYAKKLNSIIKHY--QLTQFD 472
Cdd:smart00047 84 AAFRGYFGEKFIDYAYVLR------GQNPLYKKRWGSNAL--------QTAGYATDPDYAKKLIRIIALYdeKLKGYD 147
|
|
| CHAP |
pfam05257 |
CHAP domain; This domain corresponds to an amidase function. Many of these proteins are ... |
504-593 |
3.15e-26 |
|
CHAP domain; This domain corresponds to an amidase function. Many of these proteins are involved in cell wall metabolism of bacteria. This domain is found at the N-terminus of Swiss:P43675, where it functions as a glutathionylspermidine amidase EC:3.5.1.78. This domain is found to be the catalytic domain of PlyCA. CHAP is the amidase domain of bifunctional Escherichia coli glutathionylspermidine synthetase/amidase, and it catalyzes the hydrolysis of Gsp (glutathionylspermidine) into glutathione and spermidine.
Pssm-ID: 461605 [Multi-domain] Cd Length: 83 Bit Score: 102.11 E-value: 3.15e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 504 DSMPYPHGQCTWYVYNRMKQFGtsisGDLGDAHNWNNRAQyRDYQVSH-TPKRHAAVVFEAGQFGADqhYGHVAFVEKVN 582
Cdd:pfam05257 1 YGNGYPWGQCTWFVYWRVAQLG----IYLGNAGDWADAAA-GAYKVGStTPKVGDIVVFDPGGGGAS--YGHVAIVEKVN 73
|
90
....*....|.
gi 320144280 583 sDGSIVISESN 593
Cdd:pfam05257 74 -DGSITVSEQN 83
|
|
| sporang_Gsm |
NF038016 |
sporangiospore maturation cell wall hydrolase GsmA; The peptidoglycan-hydrolyzing enzyme GsmA ... |
320-472 |
8.40e-22 |
|
sporangiospore maturation cell wall hydrolase GsmA; The peptidoglycan-hydrolyzing enzyme GsmA occurs in some sporangia-forming members of the Actinobacteria, such as Actinoplanes missouriensis, and is required for proper separation of spores. GsmA proteins have one or two SH3 domains N-terminal to the hydrolase domain.
Pssm-ID: 411609 [Multi-domain] Cd Length: 312 Bit Score: 96.35 E-value: 8.40e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 320 TRQFVKSIAKDAHRIGQDNDIYASVMIAQAILESDSGRSALAKSpNHNLFGIK-----GAFEGNSVPFNTLEADGNQ-LY 393
Cdd:NF038016 160 PAQFIAAVAPPAQQSQRATGVPASVTIAQAILESGWGRSGLTRE-DHNYFGIKcfgspGPIAVGCRSYATFECSPTGgCF 238
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 320144280 394 SINAGFRKYPSTKESLKDYSDLIKNgidGNRtiYKPTWKSEADSYKDATSHLSKTYATDPNYAKKLNSIIKHYQLTQFD 472
Cdd:NF038016 239 DTTATFRAYASAADSFRDHGRFLSV---NSR--YAPAFAYTDDPDQFAREIHKAGYATDPTYADKLIGLMKQYNLYQYD 312
|
|
| Glucosaminidase |
pfam01832 |
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; This family includes ... |
328-468 |
4.76e-21 |
|
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyse peptidoglycan.
Pssm-ID: 460354 [Multi-domain] Cd Length: 91 Bit Score: 87.63 E-value: 4.76e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 328 AKDAHRIGQDNDIYASVMIAQAILESDSGRSALAKSpNHNLFGIKGAFEGNsVPFNTLEadgnqlYSINAGFRKYPSTKE 407
Cdd:pfam01832 1 APAAIEAAKKYGIPASVLLAQAALESGWGTSRLAKE-SNNLFGIKASWKGK-VAYDTDE------VTVAARFRKYDSVEE 72
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 320144280 408 SLKDYsdlikngidgnrtiykptwkseadsykdatshlsktyatdpnYAKKLNSIIKHYQL 468
Cdd:pfam01832 73 SIRDY------------------------------------------YAEKLIAIIERYNL 91
|
|
| flagell_FlgJ |
TIGR02541 |
flagellar rod assembly protein/muramidase FlgJ; The N-terminal region of this protein acts ... |
319-463 |
2.35e-17 |
|
flagellar rod assembly protein/muramidase FlgJ; The N-terminal region of this protein acts directly in flagellar rod assembly. The C-terminal region is a flagellum-specific muramidase (peptidoglycan hydrolase) required for formation of the outer membrane L ring.
Pssm-ID: 274188 [Multi-domain] Cd Length: 294 Bit Score: 82.98 E-value: 2.35e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 319 DTRQFVKSIAKDAHRIGQDNDIYASVMIAQAILESDSGRSALAK---SPNHNLFGIK--GAFEGNSVPFNTLEADGNQLY 393
Cdd:TIGR02541 147 HPKSFVNSMLPHARKAAQQLGVPPHLILAQAALESGWGQRQIRNadgSPSYNLFGIKasGSWQGKVVTTMTTEYVDGVAQ 226
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 394 SINAGFRKYPSTKESLKDYSDLIKNGidgnrTIYKPTWKSeADSYKDATSHLSKTYATDPNYAKKLNSII 463
Cdd:TIGR02541 227 KLTAKFRSYSSYEEAFSDYARLLNNN-----PRYEAVLQQ-RSAESFARGLQRAGYATDPRYARKLLQVI 290
|
|
| flgJ |
PRK05684 |
flagellar assembly peptidoglycan hydrolase FlgJ; |
331-464 |
9.61e-15 |
|
flagellar assembly peptidoglycan hydrolase FlgJ;
Pssm-ID: 235559 [Multi-domain] Cd Length: 312 Bit Score: 75.30 E-value: 9.61e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 331 AHRIGqdndIYASVMIAQAILESDSGRSALAK---SPNHNLFGIK--GAFEGNSVPFNTLEADGNQLYSINAGFRKYPST 405
Cdd:PRK05684 167 AQQSG----VPHHLLLAQAALESGWGQREIRTadgSPSHNLFGIKadGSWKGPVTEITTTEYENGVAVKVKAAFRVYDSY 242
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 406 KESLKDYSDLIKNgidGNRtiYKPtwKSEADSYKDATSHLSKT-YATDPNYAKKLNSIIK 464
Cdd:PRK05684 243 LESFNDYVSLLTN---NPR--YAA--VTQAASPEQFARALQDAgYATDPNYARKLVSVIQ 295
|
|
| flgJ |
PRK12713 |
flagellar rod assembly protein/muramidase FlgJ; Provisional |
287-463 |
1.68e-13 |
|
flagellar rod assembly protein/muramidase FlgJ; Provisional
Pssm-ID: 139173 [Multi-domain] Cd Length: 339 Bit Score: 72.08 E-value: 1.68e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 287 NQKDTRATSLFETDPSisnnddsgqfNVVDskdtrqFVKSIAKDAHRIGQDNDIYASVMIAQAILESDSGRSALAK---S 363
Cdd:PRK12713 164 NRARDRAMAAAEGAPS----------HVVD------FVSRMSRAANVAAQQSGVPARLILGQAALESGWGRRELRHedgS 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 364 PNHNLFGIK-GA-FEGNSVPFNTLEADGNQLYSINAGFRKYPSTKESLKDYSDLIkngidGNRTIYKPTwkSEADSYKDA 441
Cdd:PRK12713 228 TSYNLFGIKaGAsWKGKVVNVMTTEYVDGVAQKLVQPFRAYSSYEESFSDYARLI-----GNSPRYEAV--TQAGNEIEA 300
|
170 180
....*....|....*....|...
gi 320144280 442 TSHLSKT-YATDPNYAKKLNSII 463
Cdd:PRK12713 301 ARRIQEAgYATDPRYAEKLISIM 323
|
|
| flgJ |
PRK12709 |
flagellar rod assembly protein/muramidase FlgJ; Provisional |
317-464 |
8.35e-13 |
|
flagellar rod assembly protein/muramidase FlgJ; Provisional
Pssm-ID: 237179 [Multi-domain] Cd Length: 320 Bit Score: 69.57 E-value: 8.35e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 317 SKDTRQFVKSIAKDAHRIGQDNDIYASVMIAQAILESDSGRSALAK---SPNHNLFGIKGA--FEGNSVPFNTLEADGNQ 391
Cdd:PRK12709 170 SPDADAFVDKLAAPAQAASAATGIPARFIVGQAALESGWGKREIRGadgSTSYNVFGIKATkgWTGRTVSAVTTEYVNGK 249
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 320144280 392 LYSINAGFRKYPSTKESLKDYSDLIKNgidgnrtiyKPTWKSEADSYKDATSHLSKT----YATDPNYAKKLNSIIK 464
Cdd:PRK12709 250 PRRVVAKFRAYDSYEHAMTDYANLLKN---------NPRYAGVLNASRSVEGFAHGMqkagYATDPHYAKKLISIMQ 317
|
|
| flgJ |
PRK12711 |
flagellar assembly peptidoglycan hydrolase FlgJ; |
323-462 |
1.36e-12 |
|
flagellar assembly peptidoglycan hydrolase FlgJ;
Pssm-ID: 237180 [Multi-domain] Cd Length: 392 Bit Score: 69.61 E-value: 1.36e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 323 FVKSIAKDAHRIGQDNDIYASVMIAQAILESDSGRSALAKSPN-HNLFGIKG-AFEGNSVPFNTLEADGNQLYSINAGFR 400
Cdd:PRK12711 218 FVAKIWTHAQKAARELGVDPRALVAQAALETGWGRRGIGNGGDsNNLFGIKAtGWNGDKVTTGTHEYVNGVKTTETADFR 297
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 320144280 401 KYPSTKESLKDYSDLIKNGidgnrTIYKPTWKSEADSYKDATSHLSKTYATDPNYAKKLNSI 462
Cdd:PRK12711 298 AYGSAEESFADYVRLLKNN-----SRYQQALQAGTDIKGFARGLQQAGYATDPGYAAKIAAI 354
|
|
| flgJ |
PRK12712 |
flagellar rod assembly protein/muramidase FlgJ; Provisional |
323-464 |
4.21e-10 |
|
flagellar rod assembly protein/muramidase FlgJ; Provisional
Pssm-ID: 139172 [Multi-domain] Cd Length: 344 Bit Score: 61.56 E-value: 4.21e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 323 FVKSIAKDAHRIGQDNDIYASVMIAQAILESDSGRSALAK---SPNHNLFGIK-GA-FEGNSVPFNTLEADGNQLYSINA 397
Cdd:PRK12712 200 FVARMAGPAEAASRASGVPARLIVGQAALESGWGRREITHadgSTTFNVFGIKaGAnWKGRVAEVTTTEYVDGQPQKVRA 279
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 398 GFRKYPSTKESLKDYSDLIKNgidgnrtiyKPTWKS--EADSYKDATSHLSKT-YATDPNYAKKLNSIIK 464
Cdd:PRK12712 280 RFRAYGSYDEACADYARLLTS---------NPRYAGvvSAASADEAAHGLQRAgYATDPAYGHKLVKIMK 340
|
|
| flgJ |
PRK12710 |
flagellar rod assembly protein/muramidase FlgJ; Provisional |
281-470 |
6.05e-08 |
|
flagellar rod assembly protein/muramidase FlgJ; Provisional
Pssm-ID: 139170 [Multi-domain] Cd Length: 291 Bit Score: 54.41 E-value: 6.05e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 281 SFNNDVNQKDTRATSLFETdpSISNNDDSgqFNVVDSkdtrqFVKSIAKDAHRIGQDNDIYASVMIAQAILESDSG---- 356
Cdd:PRK12710 100 SVGDKANNPVNSSTEVSNT--KVTNSEES--LSVVDD-----FVKSVWPTAKQAASLIGLDPKLLVAQAALETGWGkfvt 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 357 RSALAKSPNhNLFGIKGAF--EGNSVPFNTLEADGNQLYSINAGFRKYPSTKESLKDYSDLIKNGIDGNRTIykptwkSE 434
Cdd:PRK12710 171 RDADGSSSN-NLFNIKTGShsEVESIQVKTTEYIADTPIKINASFRKYPSIEHSFHDYVSLIKGSERYQMAL------AN 243
|
170 180 190
....*....|....*....|....*....|....*..
gi 320144280 435 ADSYKDATSHLSKT-YATDPNYAKKLNSIIKHYQLTQ 470
Cdd:PRK12710 244 AENPEIYVSELNKAgYATDPNYSNKILSIYHGDELNQ 280
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
22-322 |
1.50e-05 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 48.37 E-value: 1.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 22 SPTAYADTPQKDTTAKTTSHDSKKSNDDETSKDTTSKDIDKADKNNTSNQDNNDKKFKTIDDSTSDSNNIIDFIYKNLPQ 101
Cdd:NF033609 596 SDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 675
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 102 TNINQLLTKNKYDDNYSLTTLIQNLFNLNSDISDYEQPRNGEkSTNDSNKNSDNSIKNDTDTQSSKQDKADNQKAPKSNN 181
Cdd:NF033609 676 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD-SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 754
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 182 TKPSTSNKQPNSPKPTQPNQSNSQPASDDKANQKSSSKDNQSMSDSALDSILDQYSEDAKKAQKDYASQSKKDKNEKSNT 261
Cdd:NF033609 755 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 834
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 320144280 262 KNPQLPTQDELKHKSKPAQSFNNDVNQKDTRATSLFETDPSISNNDDSGQFNVVDSKDTRQ 322
Cdd:NF033609 835 DSDSDSDSDSDSDSDSDSDSDSESDSNSDSESGSNNNVVPPNSPKNGTNASNKNEAKDSKE 895
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
27-365 |
7.06e-05 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 46.06 E-value: 7.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 27 ADTPQKDTTAKTTSHDSKKSNDDETSKDTTSKDIDKADKNNTSNQDNNDKKFKTIDDSTSDSNNIIDFiyknlpqtninq 106
Cdd:NF033609 571 SDSSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSAS------------ 638
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 107 lltknkyddnyslttliqnlfNLNSDISDYEQPRNGEKSTNDSNKNSDNSIKNDTDTQSSKQDKADNQKAPKSNNTKPST 186
Cdd:NF033609 639 ---------------------DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 697
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 187 SNKQPNSPKPTQPNQSNSQPASDDKANQKSSSKDNQSMSDSALDSILDQYSEDAKKAQKDYASQSKKDKNEKSNTKNPQL 266
Cdd:NF033609 698 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 777
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 267 PTQDELKHKSKPAQSFNNDVNQKDTRATSLFETDPSISNNDDSGQFNVVDSKDTRQFVKSIAKDAHRIGQDNDIYASVMI 346
Cdd:NF033609 778 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSE 857
|
330
....*....|....*....
gi 320144280 347 AQAILESDSGRSALAKSPN 365
Cdd:NF033609 858 SDSNSDSESGSNNNVVPPN 876
|
|
| PTZ00112 |
PTZ00112 |
origin recognition complex 1 protein; Provisional |
29-218 |
1.37e-03 |
|
origin recognition complex 1 protein; Provisional
Pssm-ID: 240274 [Multi-domain] Cd Length: 1164 Bit Score: 41.90 E-value: 1.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 29 TPQKDTTAKTTSHD---SKKSNDDETSKDTTSKDIDKADKNNTSNQDNNDKKFKTIDDSTSDSNNIidfiYKNLPQTNIN 105
Cdd:PTZ00112 207 SPRNTSTIKNNTNDknkEKNKEKDKNIKKDRDGDKQTKRNSEKSKVQNSHFDVRILRSYTKENKKD----EKNVVSGIRS 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 106 QLLTKNKYDDNYSLTTLIQNLFNLnsdiSDYEQPRNGEKSTNDSNKNSDNSIKNDTDTQSSKQDKADNQKAPKSNNTKPS 185
Cdd:PTZ00112 283 SVLLKRKSQCLRKDSYVYSNHQKK----AKTGDPKNIIHRNNGSSNSNNDDTSSSNHLGSNRISNRNPSSPYKKQTTTKH 358
|
170 180 190
....*....|....*....|....*....|...
gi 320144280 186 TSNKQPNSPKPTQPNQSNSQPASDDKANQKSSS 218
Cdd:PTZ00112 359 TNNTKNNKYNKTKTTQKFNHPLRHHATINKRSS 391
|
|
| MSS4 |
COG5253 |
Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms]; |
56-237 |
8.97e-03 |
|
Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms];
Pssm-ID: 227578 [Multi-domain] Cd Length: 612 Bit Score: 39.16 E-value: 8.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 56 TSKDIDKADKNNTSNQDNNDKKFKTIDDSTSDSNNIIDFIYKNLPQTNINQLLTKNKYDDNYSLTTLIQNLFNLNSDISD 135
Cdd:COG5253 96 TSTPIVEIFKNNKDAVDPPNHTRSSGNNLSNANVKTLSAPVGEHSRSNNPPNLDQNLDTEPESSISQWGELQLNPSGKTL 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 320144280 136 YEQPRNGEKSTNDSNKnSDNSiKNDTDTQSSKQDKADNQKAPKSNNTKPSTSNKQPNSpKPTQPNQSNSQPAsddkanQK 215
Cdd:COG5253 176 SSQPSRKPTSENPKSE-SDNS-KLPTSVNSPLPDKSLLKRTLSNFWAERNSYNWKPLV-YPSCPSEHIFSDS------DV 246
|
170 180
....*....|....*....|..
gi 320144280 216 SSSKDNQSMSDSALDSILDQYS 237
Cdd:COG5253 247 IIREDEPSSLIAFCLSTSDYRN 268
|
|
| |
