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Conserved domains on  [gi|534534270|gb|EFE47328|]
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hypothetical protein HMPREF0863_01343 [Erysipelotrichaceae bacterium 5_2_54FAA]

Protein Classification

CollagenBindB domain-containing protein( domain architecture ID 10083069)

CollagenBindB domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CollagenBindB cd00222
Repeat unit of collagen-binding protein domain B; The collagen-binding protein mediates ...
 2703-2811 1.11e-17

Repeat unit of collagen-binding protein domain B; The collagen-binding protein mediates bacterial adherence to collagen; the primary sequence has a non-repetitive, collagen-binding A region, followed by instances of this B region repetitive unit. The B region has one to four 23 kDa repeat units (B1-B4), which have been suggested to serve as 'stalks' that project the A region from the bacterial surface and thus facilitate bacterial adherence to collagen. Each B repeat unit has two highly similar domains (D1 and D2) placed side-by-side; both D1 and D2 are included in this model. They exhibit a unique inverse IgG-like domain fold.


:

Pssm-ID: 212461 [Multi-domain]  Cd Length: 92  Bit Score: 80.42  E-value: 1.11e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270 2703 LTINKVWKDSDNRDQLRPDKINITLQRTWKEnkeekseivtEYESYVINGDatkATWQHVLTDLPAYKtaEDGSLcyYTY 2782
Cdd:cd00222     3 ITVTKTWDDDDNQDGKRPESITVQLLANGKE----------TGDTVTLTAS---NDWTYTFTNLPKYD--ENGKE--ITY 65

                          90       100
                  ....*....|....*....|....*....
gi 534534270 2783 TVSETAIPGYITKIDSSQDhtTFTITNSH 2811
Cdd:cd00222    66 TVKEVPVPGYTTTVTGDDG--GFTITNTH 92
FhaB super family cl27105
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
 601-1403 2.95e-03

Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];


The actual alignment was detected with superfamily member COG3210:

Pssm-ID: 442443 [Multi-domain]  Cd Length: 1698  Bit Score: 43.60  E-value: 2.95e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270  601 NCQVTNLKGITNANNYTGGLIGYVSGITKYEAITGLIGGTLKTLSellnalPVLGLGDLVTFLLDGGLLDVGSLIPIGYV 680
Cdd:COG3210   795 SIDITADGTITAAGTTAINVTGSGGTITINTATTGLTGTGDTTSG------AGGSNTTDTTTGTTSDGASGGGTAGANSG 868

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270  681 NAVITNCSVSFASGASIKGNDYTGGFIGDIRGSIIHNAKVITNGDSEIQGTNYVGGFAGRAANQVIAGALSSLGIELGNF 760
Cdd:COG3210   869 SLAATAASITVGSGGVATSTGTANAGTLTNLGTTTNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGT 948

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270  761 PVNTVFLNSQIQGSGKLNVTATSTEDNAGYAGGFVGSMSNSYAIDCSVKNLSKVSGKDYVGGFSGKVDMGDVADINESDD 840
Cdd:COG3210   949 QGNAGLSAASASDGAGDTGASSAAGSSAVGTSANSAGSTGGVIAATGILVAGNSGTTASTTGGSGAIVAGGNGVTGTTGT 1028

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270  841 NKHGLLKLVQGLLSSILSGDKNIQILNLVGMRPSVMTGIEVSGQQIAIIASGKHAGGLTGYAGAVQISNTEELKDDTKTT 920
Cdd:COG3210  1029 ASATGTGTAATAGGQNGVGVNASGISGGNAAALTASGTAGTTGGTAASNGGGGTAQASGAGTTHTLGGITNGGATGTSGG 1108

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270  921 SQEVQRILTKNNISYTYNKKGNEVSATTSLTVSAIEHAGGGIGKATMTSLSDVLGSTVKAADYMRFEVKDITIQGGTTGL 1000
Cdd:COG3210  1109 TTTSTGGVTASKVGGTTTVGATGTSTASTEAAGAGTLTGLVAVSAVAGGASSASAGDTTAVAAATTTTTGSAINGGADSA 1188

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270 1001 KVEATGANSNAGGVLGYGLGGEVRNVSLTNLASISAGKNAGGFAGYFGSGTLASVGGVDVLGLGLIQADGILSLADMVET 1080
Cdd:COG3210  1189 ATEGTAGTDLKGGDSTGGSTTTIGTTNVTTTTTLTASDTGNTTATGGSSAGQTGSFVAAGSASGTGDATTGATAGAVSNG 1268

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270 1081 MVYDSSIAGTTTGFSVKTSETDSHSGGFIGNCISGKVKRASVTALQSVSAPMDAGNAGGFIGYAKAGDALATVGNSTNLD 1160
Cdd:COG3210  1269 ATSTVAGNAGATATGSTVDIGSTSATSAGGSLDTTGNTAGANGATVGTGIGGTTATGTAVAAVNSGGVNAGGGTINTTAA 1348

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270 1161 LAGIKLTNLLGVMSALTPEFQDITLTYVANGADPQVSAQIAGGVIGDGQAVDMNYRVNHPDAGDTSAEAKTTVSGLAYVK 1240
Cdd:COG3210  1349 NTGLNGGNGATDSAAGAGSGGAAGSLAATAGAGTVLTGAGNNTGAEGTNAGRDGGVTTSGTGVGNNGGVSGTTVAGTTGS 1428

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270 1241 GTAYAGGFAGRLLPGDVAQTGSIKVLNLLDATQLLSVMDVAYPKLSDISITGEQLIVRATGKQGDVALGDAGGFLGHGKA 1320
Cdd:COG3210  1429 SATTGTGGTGNTTGTSVAGAGGGNADASAINTGNASSLGAGGSTAGNAVGGAVIGGTTTGGNGAGVAGATASNGGTSTGA 1508

                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270 1321 VTIAHANITDVKEVIGAYHAGGYVGILRSGSVAEASDATGELLNSILGKLLNVKELTSVLQAASSTITDAKVSGHANDEG 1400
Cdd:COG3210  1509 GGTAGGTTAEVAKASLEGGEGTYGGSSVAEAGTGGGILGAVSGAGSEGGAAGGVTGSVGVGGTDGAGGDTGGADDTGAQA 1588


                  ...
gi 534534270 1401 NAG 1403
Cdd:COG3210  1589 PTA 1591
 
Name Accession Description Interval E-value
CollagenBindB cd00222
Repeat unit of collagen-binding protein domain B; The collagen-binding protein mediates ...
 2703-2811 1.11e-17

Repeat unit of collagen-binding protein domain B; The collagen-binding protein mediates bacterial adherence to collagen; the primary sequence has a non-repetitive, collagen-binding A region, followed by instances of this B region repetitive unit. The B region has one to four 23 kDa repeat units (B1-B4), which have been suggested to serve as 'stalks' that project the A region from the bacterial surface and thus facilitate bacterial adherence to collagen. Each B repeat unit has two highly similar domains (D1 and D2) placed side-by-side; both D1 and D2 are included in this model. They exhibit a unique inverse IgG-like domain fold.


Pssm-ID: 212461 [Multi-domain]  Cd Length: 92  Bit Score: 80.42  E-value: 1.11e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270 2703 LTINKVWKDSDNRDQLRPDKINITLQRTWKEnkeekseivtEYESYVINGDatkATWQHVLTDLPAYKtaEDGSLcyYTY 2782
Cdd:cd00222     3 ITVTKTWDDDDNQDGKRPESITVQLLANGKE----------TGDTVTLTAS---NDWTYTFTNLPKYD--ENGKE--ITY 65

                          90       100
                  ....*....|....*....|....*....
gi 534534270 2783 TVSETAIPGYITKIDSSQDhtTFTITNSH 2811
Cdd:cd00222    66 TVKEVPVPGYTTTVTGDDG--GFTITNTH 92
Cna_B pfam05738
Cna protein B-type domain; This domain is found in Staphylococcus aureus collagen-binding ...
 2703-2810 1.95e-17

Cna protein B-type domain; This domain is found in Staphylococcus aureus collagen-binding surface protein. The structure of the repetitive B-region has been solved and forms a beta sandwich structure.


Pssm-ID: 461726 [Multi-domain]  Cd Length: 88  Bit Score: 79.21  E-value: 1.95e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270  2703 LTINKVWKDSDNRDQLRPDKINITLQRTWKENKEEKseIVTEYEsyvingdatkaTWQHVLTDLPAYktAEDGSLcyYTY 2782
Cdd:pfam05738    1 VSVTKVWDDNNNQDGIRPESITVQLLANGQKVGVTK--ELTAAN-----------NWTYTFTDLPKY--DENGKE--ITY 63

                           90       100
                   ....*....|....*....|....*...
gi 534534270  2783 TVSETAIPGYITKIDSSqdhTTFTITNS 2810
Cdd:pfam05738   64 TVEEDAVPGYTTTVDAK---DGFTITNT 88
FhaB COG3210
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
 601-1403 2.95e-03

Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442443 [Multi-domain]  Cd Length: 1698  Bit Score: 43.60  E-value: 2.95e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270  601 NCQVTNLKGITNANNYTGGLIGYVSGITKYEAITGLIGGTLKTLSellnalPVLGLGDLVTFLLDGGLLDVGSLIPIGYV 680
Cdd:COG3210   795 SIDITADGTITAAGTTAINVTGSGGTITINTATTGLTGTGDTTSG------AGGSNTTDTTTGTTSDGASGGGTAGANSG 868

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270  681 NAVITNCSVSFASGASIKGNDYTGGFIGDIRGSIIHNAKVITNGDSEIQGTNYVGGFAGRAANQVIAGALSSLGIELGNF 760
Cdd:COG3210   869 SLAATAASITVGSGGVATSTGTANAGTLTNLGTTTNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGT 948

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270  761 PVNTVFLNSQIQGSGKLNVTATSTEDNAGYAGGFVGSMSNSYAIDCSVKNLSKVSGKDYVGGFSGKVDMGDVADINESDD 840
Cdd:COG3210   949 QGNAGLSAASASDGAGDTGASSAAGSSAVGTSANSAGSTGGVIAATGILVAGNSGTTASTTGGSGAIVAGGNGVTGTTGT 1028

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270  841 NKHGLLKLVQGLLSSILSGDKNIQILNLVGMRPSVMTGIEVSGQQIAIIASGKHAGGLTGYAGAVQISNTEELKDDTKTT 920
Cdd:COG3210  1029 ASATGTGTAATAGGQNGVGVNASGISGGNAAALTASGTAGTTGGTAASNGGGGTAQASGAGTTHTLGGITNGGATGTSGG 1108

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270  921 SQEVQRILTKNNISYTYNKKGNEVSATTSLTVSAIEHAGGGIGKATMTSLSDVLGSTVKAADYMRFEVKDITIQGGTTGL 1000
Cdd:COG3210  1109 TTTSTGGVTASKVGGTTTVGATGTSTASTEAAGAGTLTGLVAVSAVAGGASSASAGDTTAVAAATTTTTGSAINGGADSA 1188

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270 1001 KVEATGANSNAGGVLGYGLGGEVRNVSLTNLASISAGKNAGGFAGYFGSGTLASVGGVDVLGLGLIQADGILSLADMVET 1080
Cdd:COG3210  1189 ATEGTAGTDLKGGDSTGGSTTTIGTTNVTTTTTLTASDTGNTTATGGSSAGQTGSFVAAGSASGTGDATTGATAGAVSNG 1268

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270 1081 MVYDSSIAGTTTGFSVKTSETDSHSGGFIGNCISGKVKRASVTALQSVSAPMDAGNAGGFIGYAKAGDALATVGNSTNLD 1160
Cdd:COG3210  1269 ATSTVAGNAGATATGSTVDIGSTSATSAGGSLDTTGNTAGANGATVGTGIGGTTATGTAVAAVNSGGVNAGGGTINTTAA 1348

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270 1161 LAGIKLTNLLGVMSALTPEFQDITLTYVANGADPQVSAQIAGGVIGDGQAVDMNYRVNHPDAGDTSAEAKTTVSGLAYVK 1240
Cdd:COG3210  1349 NTGLNGGNGATDSAAGAGSGGAAGSLAATAGAGTVLTGAGNNTGAEGTNAGRDGGVTTSGTGVGNNGGVSGTTVAGTTGS 1428

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270 1241 GTAYAGGFAGRLLPGDVAQTGSIKVLNLLDATQLLSVMDVAYPKLSDISITGEQLIVRATGKQGDVALGDAGGFLGHGKA 1320
Cdd:COG3210  1429 SATTGTGGTGNTTGTSVAGAGGGNADASAINTGNASSLGAGGSTAGNAVGGAVIGGTTTGGNGAGVAGATASNGGTSTGA 1508

                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270 1321 VTIAHANITDVKEVIGAYHAGGYVGILRSGSVAEASDATGELLNSILGKLLNVKELTSVLQAASSTITDAKVSGHANDEG 1400
Cdd:COG3210  1509 GGTAGGTTAEVAKASLEGGEGTYGGSSVAEAGTGGGILGAVSGAGSEGGAAGGVTGSVGVGGTDGAGGDTGGADDTGAQA 1588


                  ...
gi 534534270 1401 NAG 1403
Cdd:COG3210  1589 PTA 1591
 
Name Accession Description Interval E-value
CollagenBindB cd00222
Repeat unit of collagen-binding protein domain B; The collagen-binding protein mediates ...
 2703-2811 1.11e-17

Repeat unit of collagen-binding protein domain B; The collagen-binding protein mediates bacterial adherence to collagen; the primary sequence has a non-repetitive, collagen-binding A region, followed by instances of this B region repetitive unit. The B region has one to four 23 kDa repeat units (B1-B4), which have been suggested to serve as 'stalks' that project the A region from the bacterial surface and thus facilitate bacterial adherence to collagen. Each B repeat unit has two highly similar domains (D1 and D2) placed side-by-side; both D1 and D2 are included in this model. They exhibit a unique inverse IgG-like domain fold.


Pssm-ID: 212461 [Multi-domain]  Cd Length: 92  Bit Score: 80.42  E-value: 1.11e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270 2703 LTINKVWKDSDNRDQLRPDKINITLQRTWKEnkeekseivtEYESYVINGDatkATWQHVLTDLPAYKtaEDGSLcyYTY 2782
Cdd:cd00222     3 ITVTKTWDDDDNQDGKRPESITVQLLANGKE----------TGDTVTLTAS---NDWTYTFTNLPKYD--ENGKE--ITY 65

                          90       100
                  ....*....|....*....|....*....
gi 534534270 2783 TVSETAIPGYITKIDSSQDhtTFTITNSH 2811
Cdd:cd00222    66 TVKEVPVPGYTTTVTGDDG--GFTITNTH 92
Cna_B pfam05738
Cna protein B-type domain; This domain is found in Staphylococcus aureus collagen-binding ...
 2703-2810 1.95e-17

Cna protein B-type domain; This domain is found in Staphylococcus aureus collagen-binding surface protein. The structure of the repetitive B-region has been solved and forms a beta sandwich structure.


Pssm-ID: 461726 [Multi-domain]  Cd Length: 88  Bit Score: 79.21  E-value: 1.95e-17
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270  2703 LTINKVWKDSDNRDQLRPDKINITLQRTWKENKEEKseIVTEYEsyvingdatkaTWQHVLTDLPAYktAEDGSLcyYTY 2782
Cdd:pfam05738    1 VSVTKVWDDNNNQDGIRPESITVQLLANGQKVGVTK--ELTAAN-----------NWTYTFTDLPKY--DENGKE--ITY 63

                           90       100
                   ....*....|....*....|....*...
gi 534534270  2783 TVSETAIPGYITKIDSSqdhTTFTITNS 2810
Cdd:pfam05738   64 TVEEDAVPGYTTTVDAK---DGFTITNT 88
FhaB COG3210
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
 601-1403 2.95e-03

Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442443 [Multi-domain]  Cd Length: 1698  Bit Score: 43.60  E-value: 2.95e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270  601 NCQVTNLKGITNANNYTGGLIGYVSGITKYEAITGLIGGTLKTLSellnalPVLGLGDLVTFLLDGGLLDVGSLIPIGYV 680
Cdd:COG3210   795 SIDITADGTITAAGTTAINVTGSGGTITINTATTGLTGTGDTTSG------AGGSNTTDTTTGTTSDGASGGGTAGANSG 868

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270  681 NAVITNCSVSFASGASIKGNDYTGGFIGDIRGSIIHNAKVITNGDSEIQGTNYVGGFAGRAANQVIAGALSSLGIELGNF 760
Cdd:COG3210   869 SLAATAASITVGSGGVATSTGTANAGTLTNLGTTTNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGT 948

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270  761 PVNTVFLNSQIQGSGKLNVTATSTEDNAGYAGGFVGSMSNSYAIDCSVKNLSKVSGKDYVGGFSGKVDMGDVADINESDD 840
Cdd:COG3210   949 QGNAGLSAASASDGAGDTGASSAAGSSAVGTSANSAGSTGGVIAATGILVAGNSGTTASTTGGSGAIVAGGNGVTGTTGT 1028

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270  841 NKHGLLKLVQGLLSSILSGDKNIQILNLVGMRPSVMTGIEVSGQQIAIIASGKHAGGLTGYAGAVQISNTEELKDDTKTT 920
Cdd:COG3210  1029 ASATGTGTAATAGGQNGVGVNASGISGGNAAALTASGTAGTTGGTAASNGGGGTAQASGAGTTHTLGGITNGGATGTSGG 1108

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270  921 SQEVQRILTKNNISYTYNKKGNEVSATTSLTVSAIEHAGGGIGKATMTSLSDVLGSTVKAADYMRFEVKDITIQGGTTGL 1000
Cdd:COG3210  1109 TTTSTGGVTASKVGGTTTVGATGTSTASTEAAGAGTLTGLVAVSAVAGGASSASAGDTTAVAAATTTTTGSAINGGADSA 1188

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270 1001 KVEATGANSNAGGVLGYGLGGEVRNVSLTNLASISAGKNAGGFAGYFGSGTLASVGGVDVLGLGLIQADGILSLADMVET 1080
Cdd:COG3210  1189 ATEGTAGTDLKGGDSTGGSTTTIGTTNVTTTTTLTASDTGNTTATGGSSAGQTGSFVAAGSASGTGDATTGATAGAVSNG 1268

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270 1081 MVYDSSIAGTTTGFSVKTSETDSHSGGFIGNCISGKVKRASVTALQSVSAPMDAGNAGGFIGYAKAGDALATVGNSTNLD 1160
Cdd:COG3210  1269 ATSTVAGNAGATATGSTVDIGSTSATSAGGSLDTTGNTAGANGATVGTGIGGTTATGTAVAAVNSGGVNAGGGTINTTAA 1348

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270 1161 LAGIKLTNLLGVMSALTPEFQDITLTYVANGADPQVSAQIAGGVIGDGQAVDMNYRVNHPDAGDTSAEAKTTVSGLAYVK 1240
Cdd:COG3210  1349 NTGLNGGNGATDSAAGAGSGGAAGSLAATAGAGTVLTGAGNNTGAEGTNAGRDGGVTTSGTGVGNNGGVSGTTVAGTTGS 1428

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270 1241 GTAYAGGFAGRLLPGDVAQTGSIKVLNLLDATQLLSVMDVAYPKLSDISITGEQLIVRATGKQGDVALGDAGGFLGHGKA 1320
Cdd:COG3210  1429 SATTGTGGTGNTTGTSVAGAGGGNADASAINTGNASSLGAGGSTAGNAVGGAVIGGTTTGGNGAGVAGATASNGGTSTGA 1508

                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270 1321 VTIAHANITDVKEVIGAYHAGGYVGILRSGSVAEASDATGELLNSILGKLLNVKELTSVLQAASSTITDAKVSGHANDEG 1400
Cdd:COG3210  1509 GGTAGGTTAEVAKASLEGGEGTYGGSSVAEAGTGGGILGAVSGAGSEGGAAGGVTGSVGVGGTDGAGGDTGGADDTGAQA 1588


                  ...
gi 534534270 1401 NAG 1403
Cdd:COG3210  1589 PTA 1591
FhaB COG3210
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ...
 544-2144 3.52e-03

Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 442443 [Multi-domain]  Cd Length: 1698  Bit Score: 43.22  E-value: 3.52e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270  544 TLDTVQVKTTTKSIDKNVSLIAGVLKVLGLGESLKDDPKSFATGALAGVVKGNVQIDNCQVTNLKGITNANNYTGGLIGY 623
Cdd:COG3210    87 NTAGTLETGLTSNIGGGSVNGSNSTGNGTLTTTAASATTGNNTGGTTTSSTNTVTTLGGTTTGNTVLSTSGAGNNTNTNN 166

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270  624 VSGITKYEAITGLIGGTLKTLSELLNALPVLGLGDLVTFLLDGGLLDVGSLIPIGYVNAVITNCSVSFASGASIKGNDYT 703
Cdd:COG3210   167 SSSGTNIGNSIPTTGGSLNVVAANPTGVTGVGGALINATAGVLANAGGGTAGGVASANSTLTGGVVAAGTGAGVISTGGT 246

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270  704 GGFIGDIRGSIIHNA----KVITNGDSEIQGTNYVGGFAGRAANQVIAGALSSLGIELGNFPVNTVFLNSQIQGSGKLNV 779
Cdd:COG3210   247 DISSLSVAAGAGTGGaggtGNAGNTTIGTTVTGTNATGSNTAGASSGDTTTNGTSSVTGAGGTGVLGGGTAAGITTTNTV 326

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270  780 TATSTEDNAGYAGGFVGSMSNSYAIDCSVKNLSKVSGKDYVGGFSGKVDMGDVADINESDDNKHGLLKLVQGLLSSILSG 859
Cdd:COG3210   327 GGNGDGNNTTANSGAGLVSGGTGGNNGTTGTGAGSGLTGTGNGGGLTTAGAGTVASTVGTATASTGNASSTTVLGSGSLA 406

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270  860 DKNIQILNLVGMRPSVMTGIEVSGQQIAIIASGKHAGGLTGYAGAVQISNTEELKDDTKTTSQEVQRILTKNNISYTYNK 939
Cdd:COG3210   407 TGNTGTTIAGNGGSANAGGFTTTGGVLGITGNGTVTGGTIGGLTGSGTTNGAGLSGNTDVSGTGTVTNSAGNTTSATTLA 486

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270  940 KGNEVSATTSLTVSAIEHAGGGIGKATMTSLSDVLGSTVKAADYMRFEVKDITIQGGTTGLKVEATGANSNAGGVLGYGL 1019
Cdd:COG3210   487 GGGIGTVTTNATISNNAGGDANGIATGLTGITAGGGGGGNATSGGTGGDGTTLSGSGLTTTVSGGASGTTAASGSNTANT 566

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270 1020 GGEVRNVSLTNLASISAGKNAGGFAGYFGSGTLASVGGVDVLGLGLIQADGILSLADMVETMVYDSSIAGTTTGFSVKTS 1099
Cdd:COG3210   567 LGVLAATGGTSNATTAGNSTSATGGTGTNSGGTVLSIGTGSAGATGTITLGAGTSGAGANATGGGAGLTGSAVGAALSGT 646

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270 1100 ETDSHSGGFIGNCISGKVKRASVTALQSVSAPMDAGNAGGFIGYAKAGDALATVGNSTNLDLAGIKLTNLLGVMSALTPE 1179
Cdd:COG3210   647 GSGTTGTASANGSNTTGVNTAGGTGGGTTGTVTSGATGGTTGTTLNAATGGTLNNAGNTLTISTGSITVTGQIGALANAN 726

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270 1180 FQDITLTYVANGADPQVSaqiAGGVIGDGQAVDMNYRVNHPDAGDTSAEAKTTVSGLAYVKGTAYAGG--FAGRLLPGDV 1257
Cdd:COG3210   727 GDTVTFGNLGTGATLTLN---AGVTITSGNAGTLSIGLTANTTASGTTLTLANANGNTSAGATLDNAGaeISIDITADGT 803

                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270 1258 AQTGSIKVLNLLDATQLLSVMDVAYPKLSDISITGEQLIVRATGKQGDVALGDAGGFLGHGKAVTIAHANITDVKEVIGA 1337
Cdd:COG3210   804 ITAAGTTAINVTGSGGTITINTATTGLTGTGDTTSGAGGSNTTDTTTGTTSDGASGGGTAGANSGSLAATAASITVGSGG 883

                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270 1338 YHAGGYVGILRSGSVAEASDATGELLNSILGKLLNVKELTSVLQAASSTITDAKVSGHANDEGNAGLYVHTEVFEGNDIS 1417
Cdd:COG3210   884 VATSTGTANAGTLTNLGTTTNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGTQGNAGLSAASASDGA 963

                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270 1418 QAQGYAGGYVGEMQSGYIDNQANAVDGQKGTAVEhLWKVEGLRYAGGFGGLVQAGSVAEVGQDSSLLNQLTQFNDTLSVI 1497
Cdd:COG3210   964 GDTGASSAAGSSAVGTSANSAGSTGGVIAATGIL-VAGNSGTTASTTGGSGAIVAGGNGVTGTTGTASATGTGTAATAGG 1042

                         970       980       990      1000      1010      1020      1030      1040
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270 1498 QAFVPVIQHASIRSIASGMRVHVSGSDTQDNTNDVNTGSAGGYIGYASGVQISNCDVQKLQNTKVVEPKDLQTREANSYF 1577
Cdd:COG3210  1043 QNGVGVNASGISGGNAAALTASGTAGTTGGTAASNGGGGTAQASGAGTTHTLGGITNGGATGTSGGTTTSTGGVTASKVG 1122

                        1050      1060      1070      1080      1090      1100      1110      1120
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270 1578 DGTSDYAIKGYRYAGGYFGKVVIGSTAAIGGVKVLDKVLQLANAASALNVVVSIVEHSDVYGVASGFNVIASDTTGKIGK 1657
Cdd:COG3210  1123 GTTTVGATGTSTASTEAAGAGTLTGLVAVSAVAGGASSASAGDTTAVAAATTTTTGSAINGGADSAATEGTAGTDLKGGD 1202

                        1130      1140      1150      1160      1170      1180      1190      1200
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270 1658 AGGFAGDMQGTQVQDANVYRFAHIIARESAGGYAGTIQPGDVADVVTGTSVLGGLIQADNLVSVLRTFVPTIKNSETTCI 1737
Cdd:COG3210  1203 STGGSTTTIGTTNVTTTTTLTASDTGNTTATGGSSAGQTGSFVAAGSASGTGDATTGATAGAVSNGATSTVAGNAGATAT 1282

                        1210      1220      1230      1240      1250      1260      1270      1280
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270 1738 PCGGVVRADAQSSDGVLRGLAGGYVGHNFGGQIWGNDGSDWKSSAYTGPQRKASIKRIRSVYGVEYAGGYTGLMQCANVA 1817
Cdd:COG3210  1283 GSTVDIGSTSATSAGGSLDTTGNTAGANGATVGTGIGGTTATGTAVAAVNSGGVNAGGGTINTTAANTGLNGGNGATDSA 1362

                        1290      1300      1310      1320      1330      1340      1350      1360
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270 1818 DTGSLHLLFDLITLDNPLTVMQAVYPSEKQTAVSGPLRNLDMAEWNAWVKAVGVYGAYGQQLKELGEVNTAEEFTSIIQK 1897
Cdd:COG3210  1363 AGAGSGGAAGSLAATAGAGTVLTGAGNNTGAEGTNAGRDGGVTTSGTGVGNNGGVSGTTVAGTTGSSATTGTGGTGNTTG 1442

                        1370      1380      1390      1400      1410      1420      1430      1440
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270 1898 YAYGYAVSAGRNQDAATSIQGSAAGGYVGRMEGGTITDAIAQDLKTSNAYRSAGGFAGEMITGTVAHTGDIDLANVKLAG 1977
Cdd:COG3210  1443 TSVAGAGGGNADASAINTGNASSLGAGGSTAGNAVGGAVIGGTTTGGNGAGVAGATASNGGTSTGAGGTAGGTTAEVAKA 1522

                        1450      1460      1470      1480      1490      1500      1510      1520
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270 1978 TIPAIESFVP----VIHTSSVEGYRGGASIAATGVNQTQTTGYAGGYVGYMVGGQIWGNATTACNIEKLRRVDGTSYVGG 2053
Cdd:COG3210  1523 SLEGGEGTYGgssvAEAGTGGGILGAVSGAGSEGGAAGGVTGSVGVGGTDGAGGDTGGADDTGAQAPTAGNTATLTLSLA 1602

                        1530      1540      1550      1560      1570      1580      1590      1600
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 534534270 2054 YAGKVDPGSVTRVDTATKQGLLNQVLNLMIASPADLVQVLNATISTIRYAKVSSWDDWGIVVNGAYQEGVNTAYAKAAGG 2133
Cdd:COG3210  1603 EGTNAEYGGTTNVTSGTAGNAGATGANSNTVVTTNGGEGVLALVAGGNTTNGTTLSGAVNGAGNGWAVDLTDATLAGLGG 1682

                        1610
                  ....*....|.
gi 534534270 2134 FAGSLSGAVLG 2144
Cdd:COG3210  1683 ATTAAAGNVAT 1693
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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