View
Concise Results
Standard Results
Full Results
C4-dicarboxylate anaerobic carrier [Pyramidobacter piscolens W5455]
Protein Classification
YfcC family protein ( domain architecture ID 10787488 )
YfcC family protein similar to Escherichia coli YfcC, which upregulates the expression of aceA and aceB, the key genes in glyoxylate shunt
List of domain hits
Name
Accession
Description
Interval
E-value
YfcC
COG1288 Predicted membrane transporter YfcC, affects glyoxylate shunt [General function prediction ...
29-491
3.22e-165
Predicted membrane transporter YfcC, affects glyoxylate shunt [General function prediction only];
Pssm-ID: 440899 [Multi-domain]
Cd Length: 464
Bit Score: 475.01
E-value: 3.22e-165
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 29 M TETVQ K RWYE K L PH P Y IL LF L I V V AV AILT YFL P P G V YDRV V v DGR K VV D P AT YH A V DPT P VT L MQFL TA IPR G I V N A G 108
Cdd:COG1288 1 M ETKKK K KKKF K F PH A Y VI LF I I I V LA AILT WII P A G E YDRV E - DGR T VV V P GS YH Y V EQN P QG L FDIF TA PIK G L V E A A 79
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 109 IVVVITF I S G AM F N V LQS TGAI EH G V G YA V KRIG v G NY K K LI WIV ML I F GFL G A T V G - F E NN IA VT PI A V FV A L ALG G D V 187
Cdd:COG1288 80 DIIFFIL I I G GA F G V INK TGAI DA G I G AL V RKLK - G KE K L LI PVL ML L F ALG G T T F G m A E ET IA FY PI L V PL A I ALG Y D A 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 188 MV G AGMAIA G I GIGFA T S P INP Y TVG T A HA IA Q LP IY SGI AF R SLYCLCAIILTGFH V TS Y MDRIRR DP S KSLV P -- D AD 265
Cdd:COG1288 159 IT G VAIIFL G A GIGFA A S T INP F TVG I A QG IA G LP LF SGI GL R LVIFVVFTLIAIIY V MR Y AKKVKK DP E KSLV Y dd D EE 238
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 266 TSGLT L TKPI ED Y E L TGR D K A VL S VF VA G MAFT I F GVL RY GWY LN EMA G LFL LI GIV GAFV GG IRP N RMV E LMIE GAK SV 345
Cdd:COG1288 239 FRKRF L KDDD ED P E F TGR H K L VL L VF AL G FVIM I Y GVL KL GWY FP EMA A LFL VM GIV AGII GG LSE N KIA E AFVK GAK DL 318
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 346 A GGAL A IG V A LA I Q V V M K DG N I T D AVIH GL VAP L Q GL GVYAS A VL M SVGHC L I NF LI PSGSGQA MA TMP V M I PL S DLVG M 425
Cdd:COG1288 319 L GGAL I IG L A RG I L V I M E DG K I L D TILY GL SNL L S GL PPVLF A IG M FIVQS L L NF FV PSGSGQA AL TMP I M A PL A DLVG V 398
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 282586567 426 TRQ VS V M AFQ I GDG V TNL CY PT V G GML A M LA LTR VP F D R W FR FV F PL VVKVV LL GW VF MCVGIA IG 491
Cdd:COG1288 399 TRQ TA V L AFQ F GDG L TNL IT PT S G VLM A T LA IAG VP Y D K W LK FV W PL FLILF LL AI VF LIIAVL IG 464
Name
Accession
Description
Interval
E-value
YfcC
COG1288 Predicted membrane transporter YfcC, affects glyoxylate shunt [General function prediction ...
29-491
3.22e-165
Predicted membrane transporter YfcC, affects glyoxylate shunt [General function prediction only];
Pssm-ID: 440899 [Multi-domain]
Cd Length: 464
Bit Score: 475.01
E-value: 3.22e-165
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 29 M TETVQ K RWYE K L PH P Y IL LF L I V V AV AILT YFL P P G V YDRV V v DGR K VV D P AT YH A V DPT P VT L MQFL TA IPR G I V N A G 108
Cdd:COG1288 1 M ETKKK K KKKF K F PH A Y VI LF I I I V LA AILT WII P A G E YDRV E - DGR T VV V P GS YH Y V EQN P QG L FDIF TA PIK G L V E A A 79
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 109 IVVVITF I S G AM F N V LQS TGAI EH G V G YA V KRIG v G NY K K LI WIV ML I F GFL G A T V G - F E NN IA VT PI A V FV A L ALG G D V 187
Cdd:COG1288 80 DIIFFIL I I G GA F G V INK TGAI DA G I G AL V RKLK - G KE K L LI PVL ML L F ALG G T T F G m A E ET IA FY PI L V PL A I ALG Y D A 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 188 MV G AGMAIA G I GIGFA T S P INP Y TVG T A HA IA Q LP IY SGI AF R SLYCLCAIILTGFH V TS Y MDRIRR DP S KSLV P -- D AD 265
Cdd:COG1288 159 IT G VAIIFL G A GIGFA A S T INP F TVG I A QG IA G LP LF SGI GL R LVIFVVFTLIAIIY V MR Y AKKVKK DP E KSLV Y dd D EE 238
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 266 TSGLT L TKPI ED Y E L TGR D K A VL S VF VA G MAFT I F GVL RY GWY LN EMA G LFL LI GIV GAFV GG IRP N RMV E LMIE GAK SV 345
Cdd:COG1288 239 FRKRF L KDDD ED P E F TGR H K L VL L VF AL G FVIM I Y GVL KL GWY FP EMA A LFL VM GIV AGII GG LSE N KIA E AFVK GAK DL 318
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 346 A GGAL A IG V A LA I Q V V M K DG N I T D AVIH GL VAP L Q GL GVYAS A VL M SVGHC L I NF LI PSGSGQA MA TMP V M I PL S DLVG M 425
Cdd:COG1288 319 L GGAL I IG L A RG I L V I M E DG K I L D TILY GL SNL L S GL PPVLF A IG M FIVQS L L NF FV PSGSGQA AL TMP I M A PL A DLVG V 398
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 282586567 426 TRQ VS V M AFQ I GDG V TNL CY PT V G GML A M LA LTR VP F D R W FR FV F PL VVKVV LL GW VF MCVGIA IG 491
Cdd:COG1288 399 TRQ TA V L AFQ F GDG L TNL IT PT S G VLM A T LA IAG VP Y D K W LK FV W PL FLILF LL AI VF LIIAVL IG 464
PRK11588
PRK11588 putative basic amino acid antiporter YfcC;
32-493
1.22e-65
putative basic amino acid antiporter YfcC;
Pssm-ID: 236934 [Multi-domain]
Cd Length: 506
Bit Score: 220.26
E-value: 1.22e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 32 TVQK RW ye KL P HPYILL F LIVVAV A IL TY FL P P G VY D ---- RVV VDG ---- RKVVDP ATY - HAV D PT ------ P V T L MQ - 95
Cdd:PRK11588 8 KPTR RW -- AM P DTLVII F FVAILA A LA TY VV P V G MF D sqev QYQ VDG qtkt RKVVDP HSF r ILT D EA gepeyh R V Q L FT t 85
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 96 ------ FLTAIPR G IVNA ------- GI VVVITF I S GA m F NVLQS TG A I EH G V g Y A VK R IGV GN YKKL I WIVMLI F GFL GA 162
Cdd:PRK11588 86 gderpg LMNFPFE G LTSG skwgtav GI IMFMLV I G GA - F GIVMR TG T I DN G I - L A LI R KTR GN EILF I PVLFIL F SLG GA 163
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 163 TV G F - E NN IA VTP I AVFVALA LG G D VMVGAGMAIAGIG IGFATS PI NP YT V GT A HA IA QL P IY SG IAF R ---- SLYC L CA 237
Cdd:PRK11588 164 VF G M g E EA IA FAI I IAPLMVR LG Y D SITTVLVTYVATQ IGFATS WM NP FS V AI A QG IA GV P VL SG SGL R ivmw VIFT L IG 243
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 238 I I L T GF hvts Y MD R IRRD P SK S L V PDA D TSGLTLTKPI E DYEL T GR D KA VL S V FV A G M AFT I F GV LRYG W YLN E M A GL F - 316
Cdd:PRK11588 244 L I F T MV ---- Y AS R VKKN P LL S R V HES D RFFREKQADV E QRPF T FG D WL VL L V LT A V M VWV I W GV VVNA W FIP E I A SQ F f 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 317 --- L L IG IV G AF -- VG G IRP N R M VELMI EGA KSVAGG AL AI G V A LA I QVVMKD G NIT D A ----- VIHGLVAPLQ GL GVYA 386
Cdd:PRK11588 320 tmg L V IG LI G VV fr LN G MTV N T M ASSFT EGA RMMLAP AL LV G F A KG I LLLLGG G EPG D P svlnt ILNSAGGAIS GL PDAV 399
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 387 SA VL M SVGHCLI NF LIP SGSGQA MA TMP V M I PL S DLVG MT RQV S V M AFQ I GDG V TN LC YPT VGGML A M L ALT RV P F DR W F 466
Cdd:PRK11588 400 SA WF M LLFQSVF NF FVT SGSGQA AL TMP L M A PL A DLVG VN RQV A V L AFQ L GDG F TN II YPT SASLM A T L GVC RV D F GN W L 479
490 500
....*....|....*....|....*..
gi 282586567 467 R F VFPLVVKVVLLGW V FMCVGIAI G WN 493
Cdd:PRK11588 480 K F IWRFLLLLFIMSS V VVIGAQYM G YH 506
DcuC
pfam03606 C4-dicarboxylate anaerobic carrier;
47-488
1.67e-60
C4-dicarboxylate anaerobic carrier;
Pssm-ID: 427395 [Multi-domain]
Cd Length: 454
Bit Score: 205.24
E-value: 1.67e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 47 L LF L I V V AV AILT YFL P P GV YDRV -------- VVD G RKV V D P A TY HAVDPTPVT L MQFLTAIPR G IVN A GIVVVITFIS G 118
Cdd:pfam03606 2 I LF I I A V GY AILT WYI P A GV LAKA giilgiys GAL G KPE V L P F TY KSTGYLMLD L PIEEYVKGL G MSR A VDLGMFILVL G 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 119 AMFNVLQS TGAI EH GV GYAV K RIG v G NYKKL I WIVMLI F GFL G ATV G F - E NNI A VT PI AVFVAL ALG G D VMV GA GMAI A G 197
Cdd:pfam03606 82 GFAGYMMR TGAI DA GV KALS K PLK - G IESPY I LLLAAY F SLG G TVL G M s E ETV A FM PI LFPIMV ALG Y D SRT GA AAIC A A 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 198 IGI GF AT S PI NP YT V GT A HA IA Q LP IYS G IAF R S L YCLCAI I LTGFHVTS Y MDR I RR DP SK S LVPDA D T sg LTLTKPI E D 277
Cdd:pfam03606 161 TAV GF LA S TS NP FD V VI A AQ IA G LP LLD G FGL R L L PWVIIT I ISIAYLHF Y AQK I KD DP VY S EKDES D Q -- HEMDEQS E V 238
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 278 YELTG R D K AV L SVF V AGMAFTIF G -- V LRY GW YLN E M A G LFL LI GI VGA F V --- G G IRP N RM VE LMI EGA KSVA G G AL AI 352
Cdd:pfam03606 239 TTIFS R P K VY L ILP V LPFILMLW G fg V IVN GW WFP E I A V LFL AM GI IIG F I rkf N G LGE N EI VE AFY EGA ADLL G F AL VV 318
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 353 G V A LAIQVVMKD G N I T D AVIHGLVAPLQ GL GVYASAVL M SVGHC L IN F LI PSGSG Q A MA TMP V M I PL S DLVG MT R Q V S V M 432
Cdd:pfam03606 319 G L A RGVGLFAQG G M I I D TILNLISGAIS GL PGILFILV M LLIQA L AA F VV PSGSG P A YL TMP L M A PL A DLVG IP R A V L V L 398
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 282586567 433 A F Q IGD G VTNLCY PT V G GML A M L ALT R VPFDR W FR FV F P L V VKVVLLGWVFMCVGI 488
Cdd:pfam03606 399 A M Q FAS G LGRIIS PT S G VVV A T L GMA R ISPFT W VK FV A P P V AVGLIIVIIVTIIAV 454
Name
Accession
Description
Interval
E-value
YfcC
COG1288 Predicted membrane transporter YfcC, affects glyoxylate shunt [General function prediction ...
29-491
3.22e-165
Predicted membrane transporter YfcC, affects glyoxylate shunt [General function prediction only];
Pssm-ID: 440899 [Multi-domain]
Cd Length: 464
Bit Score: 475.01
E-value: 3.22e-165
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 29 M TETVQ K RWYE K L PH P Y IL LF L I V V AV AILT YFL P P G V YDRV V v DGR K VV D P AT YH A V DPT P VT L MQFL TA IPR G I V N A G 108
Cdd:COG1288 1 M ETKKK K KKKF K F PH A Y VI LF I I I V LA AILT WII P A G E YDRV E - DGR T VV V P GS YH Y V EQN P QG L FDIF TA PIK G L V E A A 79
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 109 IVVVITF I S G AM F N V LQS TGAI EH G V G YA V KRIG v G NY K K LI WIV ML I F GFL G A T V G - F E NN IA VT PI A V FV A L ALG G D V 187
Cdd:COG1288 80 DIIFFIL I I G GA F G V INK TGAI DA G I G AL V RKLK - G KE K L LI PVL ML L F ALG G T T F G m A E ET IA FY PI L V PL A I ALG Y D A 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 188 MV G AGMAIA G I GIGFA T S P INP Y TVG T A HA IA Q LP IY SGI AF R SLYCLCAIILTGFH V TS Y MDRIRR DP S KSLV P -- D AD 265
Cdd:COG1288 159 IT G VAIIFL G A GIGFA A S T INP F TVG I A QG IA G LP LF SGI GL R LVIFVVFTLIAIIY V MR Y AKKVKK DP E KSLV Y dd D EE 238
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 266 TSGLT L TKPI ED Y E L TGR D K A VL S VF VA G MAFT I F GVL RY GWY LN EMA G LFL LI GIV GAFV GG IRP N RMV E LMIE GAK SV 345
Cdd:COG1288 239 FRKRF L KDDD ED P E F TGR H K L VL L VF AL G FVIM I Y GVL KL GWY FP EMA A LFL VM GIV AGII GG LSE N KIA E AFVK GAK DL 318
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 346 A GGAL A IG V A LA I Q V V M K DG N I T D AVIH GL VAP L Q GL GVYAS A VL M SVGHC L I NF LI PSGSGQA MA TMP V M I PL S DLVG M 425
Cdd:COG1288 319 L GGAL I IG L A RG I L V I M E DG K I L D TILY GL SNL L S GL PPVLF A IG M FIVQS L L NF FV PSGSGQA AL TMP I M A PL A DLVG V 398
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 282586567 426 TRQ VS V M AFQ I GDG V TNL CY PT V G GML A M LA LTR VP F D R W FR FV F PL VVKVV LL GW VF MCVGIA IG 491
Cdd:COG1288 399 TRQ TA V L AFQ F GDG L TNL IT PT S G VLM A T LA IAG VP Y D K W LK FV W PL FLILF LL AI VF LIIAVL IG 464
PRK11588
PRK11588 putative basic amino acid antiporter YfcC;
32-493
1.22e-65
putative basic amino acid antiporter YfcC;
Pssm-ID: 236934 [Multi-domain]
Cd Length: 506
Bit Score: 220.26
E-value: 1.22e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 32 TVQK RW ye KL P HPYILL F LIVVAV A IL TY FL P P G VY D ---- RVV VDG ---- RKVVDP ATY - HAV D PT ------ P V T L MQ - 95
Cdd:PRK11588 8 KPTR RW -- AM P DTLVII F FVAILA A LA TY VV P V G MF D sqev QYQ VDG qtkt RKVVDP HSF r ILT D EA gepeyh R V Q L FT t 85
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 96 ------ FLTAIPR G IVNA ------- GI VVVITF I S GA m F NVLQS TG A I EH G V g Y A VK R IGV GN YKKL I WIVMLI F GFL GA 162
Cdd:PRK11588 86 gderpg LMNFPFE G LTSG skwgtav GI IMFMLV I G GA - F GIVMR TG T I DN G I - L A LI R KTR GN EILF I PVLFIL F SLG GA 163
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 163 TV G F - E NN IA VTP I AVFVALA LG G D VMVGAGMAIAGIG IGFATS PI NP YT V GT A HA IA QL P IY SG IAF R ---- SLYC L CA 237
Cdd:PRK11588 164 VF G M g E EA IA FAI I IAPLMVR LG Y D SITTVLVTYVATQ IGFATS WM NP FS V AI A QG IA GV P VL SG SGL R ivmw VIFT L IG 243
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 238 I I L T GF hvts Y MD R IRRD P SK S L V PDA D TSGLTLTKPI E DYEL T GR D KA VL S V FV A G M AFT I F GV LRYG W YLN E M A GL F - 316
Cdd:PRK11588 244 L I F T MV ---- Y AS R VKKN P LL S R V HES D RFFREKQADV E QRPF T FG D WL VL L V LT A V M VWV I W GV VVNA W FIP E I A SQ F f 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 317 --- L L IG IV G AF -- VG G IRP N R M VELMI EGA KSVAGG AL AI G V A LA I QVVMKD G NIT D A ----- VIHGLVAPLQ GL GVYA 386
Cdd:PRK11588 320 tmg L V IG LI G VV fr LN G MTV N T M ASSFT EGA RMMLAP AL LV G F A KG I LLLLGG G EPG D P svlnt ILNSAGGAIS GL PDAV 399
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 387 SA VL M SVGHCLI NF LIP SGSGQA MA TMP V M I PL S DLVG MT RQV S V M AFQ I GDG V TN LC YPT VGGML A M L ALT RV P F DR W F 466
Cdd:PRK11588 400 SA WF M LLFQSVF NF FVT SGSGQA AL TMP L M A PL A DLVG VN RQV A V L AFQ L GDG F TN II YPT SASLM A T L GVC RV D F GN W L 479
490 500
....*....|....*....|....*..
gi 282586567 467 R F VFPLVVKVVLLGW V FMCVGIAI G WN 493
Cdd:PRK11588 480 K F IWRFLLLLFIMSS V VVIGAQYM G YH 506
DcuC
pfam03606 C4-dicarboxylate anaerobic carrier;
47-488
1.67e-60
C4-dicarboxylate anaerobic carrier;
Pssm-ID: 427395 [Multi-domain]
Cd Length: 454
Bit Score: 205.24
E-value: 1.67e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 47 L LF L I V V AV AILT YFL P P GV YDRV -------- VVD G RKV V D P A TY HAVDPTPVT L MQFLTAIPR G IVN A GIVVVITFIS G 118
Cdd:pfam03606 2 I LF I I A V GY AILT WYI P A GV LAKA giilgiys GAL G KPE V L P F TY KSTGYLMLD L PIEEYVKGL G MSR A VDLGMFILVL G 81
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 119 AMFNVLQS TGAI EH GV GYAV K RIG v G NYKKL I WIVMLI F GFL G ATV G F - E NNI A VT PI AVFVAL ALG G D VMV GA GMAI A G 197
Cdd:pfam03606 82 GFAGYMMR TGAI DA GV KALS K PLK - G IESPY I LLLAAY F SLG G TVL G M s E ETV A FM PI LFPIMV ALG Y D SRT GA AAIC A A 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 198 IGI GF AT S PI NP YT V GT A HA IA Q LP IYS G IAF R S L YCLCAI I LTGFHVTS Y MDR I RR DP SK S LVPDA D T sg LTLTKPI E D 277
Cdd:pfam03606 161 TAV GF LA S TS NP FD V VI A AQ IA G LP LLD G FGL R L L PWVIIT I ISIAYLHF Y AQK I KD DP VY S EKDES D Q -- HEMDEQS E V 238
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 278 YELTG R D K AV L SVF V AGMAFTIF G -- V LRY GW YLN E M A G LFL LI GI VGA F V --- G G IRP N RM VE LMI EGA KSVA G G AL AI 352
Cdd:pfam03606 239 TTIFS R P K VY L ILP V LPFILMLW G fg V IVN GW WFP E I A V LFL AM GI IIG F I rkf N G LGE N EI VE AFY EGA ADLL G F AL VV 318
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 353 G V A LAIQVVMKD G N I T D AVIHGLVAPLQ GL GVYASAVL M SVGHC L IN F LI PSGSG Q A MA TMP V M I PL S DLVG MT R Q V S V M 432
Cdd:pfam03606 319 G L A RGVGLFAQG G M I I D TILNLISGAIS GL PGILFILV M LLIQA L AA F VV PSGSG P A YL TMP L M A PL A DLVG IP R A V L V L 398
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 282586567 433 A F Q IGD G VTNLCY PT V G GML A M L ALT R VPFDR W FR FV F P L V VKVVLLGWVFMCVGI 488
Cdd:pfam03606 399 A M Q FAS G LGRIIS PT S G VVV A T L GMA R ISPFT W VK FV A P P V AVGLIIVIIVTIIAV 454
ABG_transport
pfam03806 AbgT putative transporter family;
40-446
4.19e-07
AbgT putative transporter family;
Pssm-ID: 397742
Cd Length: 502
Bit Score: 52.36
E-value: 4.19e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 40 KLP H P YI L LFLIV V AVAILTYF L pp GVYDRVV V DG R KVVDPA T YHAVDPTPV - T L MQF LT AIPRGIVN --- A G I V V V ITF 115
Cdd:pfam03806 12 KLP D P VT L FIILI V LLMVASAI L -- SAFGVSA V NP R TGGTKG T IEVKNLLSA e G L AKI LT NMVKNFTG fap L G L V L V VML 89
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 116 IS G amfn V LQST G A I EHGVGYAVKRIG vgny KKL IWIVMLIF G F L GA T VGFENNIAVT P I A VFVAL ALG GDVMV G AGM A I 195
Cdd:pfam03806 90 GV G ---- V AERS G L I SALMRKLLNKAP ---- KKL LTPTVVFI G I L SH T ASDAAYVVLI P L A AMIFH ALG RHPLA G LAA A F 161
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 196 AG IGI GF AT ---- SP I N P YTV G TAHAI AQ L -- P I Y SGIAFRSL Y CLC A ---- IILT G FH VT SYMDRI R RD P SK sl VPDAD 265
Cdd:pfam03806 162 AG VSG GF SA nllp GT I D P LLA G ITQTA AQ I id P S Y VVNPLMNW Y FMA A svvv LTPI G WF VT DKIVEP R LG P YQ -- GSLDA 239
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 266 TSGLT L TKP I EDY E LT G RDK A VLS -- VFV A GM A F T I --- F G V LR ------------ YGWYLNEMAG LFL LI G I V - G AFV G 327
Cdd:pfam03806 240 DEKDE L ASN I TAL E KK G LRW A GVA fv ALI A LL A L T V ipe N G P LR dpetgsvagspf MKSIVPLIFL LFL VP G L V y G RVT G 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 328 G I RPN R - M V EL M I E GAK S VAGGALAIGV A LAIQVVMKDG N ITDAVIHGLVAP L QGL G VYASAVLMS -- VGHCL IN F LI P S 404
Cdd:pfam03806 320 T I KNE R d V V NM M A E SMS S MGTYIVIAFF A AQFVAMFNWS N MGPILAVKGAEF L KAI G LPGIPLFLG fi LLSAF IN L LI G S 399
410 420 430 440
....*....|....*....|....*....|....*....|..
gi 282586567 405 G S GQAMATM P VMI P LSD L V G MTRQVSVM A FQ IGD G VTN LCY P 446
Cdd:pfam03806 400 A S AKWAILA P IFV P MLM L L G YSPEFTQA A YR IGD S VTN IIT P 441
SCFA_trans
pfam02667 Short chain fatty acid transporter; This family consists of two sequences annotated as short ...
397-446
5.11e-04
Short chain fatty acid transporter; This family consists of two sequences annotated as short chain fatty acid transporters, however, there are no references giving details of experimental characterization of this function.
Pssm-ID: 280776
Cd Length: 453
Bit Score: 42.49
E-value: 5.11e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 282586567 397 LIN FL IPSG S G QAMATM P VM IP LSDLV G MTRQV SVMA FQI GD GV TN LCY P 446
Cdd:pfam02667 365 LIN IF IPSG G G HWAIQG P IV IP AAQAL G VDLGK SVMA IAY GD AW TN MAQ P 414
AtoE
COG2031 Short chain fatty acids transporter [Lipid transport and metabolism];
287-459
4.65e-03
Short chain fatty acids transporter [Lipid transport and metabolism];
Pssm-ID: 441634
Cd Length: 442
Bit Score: 39.37
E-value: 4.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 287 V LS VFVAGMAFTIFGVLRY ---- GWY LN EMAG LFL LI G IV ga FV G gi R P NRMVELMI E GA KS V AG GALAIGVALA I QVV M 362
Cdd:COG2031 245 L LS LLIGLLGLAYLVYYFA tkgf ALN LN IVNF LFL FL G LL -- LH G -- T P RSYLRAVA E AV KS A AG ILIQFPFYAG I MGI M 320
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282586567 363 KDGNITDAVIHGL V A plqglgv Y A SA ---- VLMSVGHC L I NF LI PSG S GQ AMATM P VMI P LSDLV G MTRQVSV MA FQI GD 438
Cdd:COG2031 321 TASGLAAVISEWF V S ------- I A TP ttfp LFTFLSAG L V NF FV PSG G GQ WAVQG P IVM P AAQEL G VDLGKAA MA VAW GD 393
170 180
....*....|....*....|.
gi 282586567 439 GV TN LCY P TV gg M L AM L ALTR 459
Cdd:COG2031 394 AW TN MIQ P FW -- A L PL L GIAG 412
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
