NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|169293982|gb|EDS76115|]
View 

glycogen phosphorylase [[Clostridium] spiroforme DSM 1552]

Protein Classification

glycogen/starch/alpha-glucan phosphorylase( domain architecture ID 11092386)

glycogen/starch/alpha-glucan phosphorylase uses phosphate to catalyze the cleavage of alpha 1,4-linkages between pairs of glucose residues at the end of glucose polymers or oligomers, releasing alpha-D-glucose 1-phosphate

CATH:  3.40.50.2000
CAZY:  GT35
EC:  2.4.1.1
PubMed:  11340058|11949930
SCOP:  4000830

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
Phosphorylase pfam00343
Carbohydrate phosphorylase; The members of this family catalyze the formation of glucose ...
108-808 0e+00

Carbohydrate phosphorylase; The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin.


:

Pssm-ID: 459770  Cd Length: 713  Bit Score: 1219.10  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  108 LAEFGINIHDLEELESDAglgngglgrlAACFMDSLASLAYPGHGHTIRYEFGLFKQKIENGYQIELPDQWMQTGFNWEV 187
Cdd:pfam00343   1 LAELGLDLEELEEQEPDAglgngglgrlAACFLDSLATLGLPAYGYGIRYEYGLFKQKIVDGWQVELPDNWLRFGNPWEI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  188 RKPKHRVPVKFFGKIV--YNDATGKYEHIDTEEVYAVPYDVPIIGNDTTTTNTLRLWGAEASENIpanqDFR-----HYI 260
Cdd:pfam00343  81 RRPEVAVEVKFGGRVEeyTDGGRLRVRWVPGETVLAVPYDTPIPGYGTNTVNTLRLWSAEASEEF----DLDafnagDYI 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  261 QNVRD------ICQMLYPDDSTPAGKMLRLKQEYFFTCAGLSSIVKAHLRNYPNLDNFHEKNVIQLNDTHPVLAIPELMR 334
Cdd:pfam00343 157 RAVEEknraenISKVLYPNDSTEEGKELRLKQQYFFVSASLQDIIRRFKKGGGDLDELPDKVAIQLNDTHPALAIPELMR 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  335 ILIDEKGYEWDDAWDITTQTFAYTNHTILAEALETWPIDVMQTLLPRIYQIIEEIHRRFIGYVKMVSNRDEELLNRVMIL 414
Cdd:pfam00343 237 ILVDEEGLGWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFERLLPRHLEIIYEINRRFLEEVRAKFPGDEDRLRRMSII 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  415 ---RDGLVYMARLAIVGSFSVNGVAKLHSDILVERELRDFAVLYPNKFNNKTNGVTHRRWLAYCNPQLASLITEYIGDEW 491
Cdd:pfam00343 317 eegGDKQVRMAHLAIVGSHSVNGVAALHTELLKETVFKDFYELYPEKFNNKTNGITPRRWLLLANPELAALITETIGDGW 396
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  492 IKHPEKLEDLMNYVDDVNLQERFLEVKKERKQVLADYILKHNGIKVDVDSIFDIQVKRLHAYKRQLLNILHVIDLYFRMK 571
Cdd:pfam00343 397 ITDLDQLKKLEPFADDPAFLERWRAIKQANKQRLAAYIKKTTGIEVDPDSIFDVQVKRIHEYKRQLLNALHIITLYNRIK 476
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  572 ENPDYRIEPRTFIFGAKAASGYYFAKKVIKLINSVGDVVNNDPETNKYLKVIFLENYGVTLAEKIMPAADVSEQISTAGK 651
Cdd:pfam00343 477 ENPNADIVPRTFIFGGKAAPGYYMAKLIIKLINSVAEVVNNDPDVNDKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGK 556
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  652 EASGTGNMKFMMNGAITLGTLDGANVEISQLVGDENCVIFGLKDHEVKELQVNGsYHAWDVYNNNPRIRRVIDSLMDGTF 731
Cdd:pfam00343 557 EASGTGNMKFMLNGALTIGTLDGANVEIREEVGEENIFIFGLTAEEVEALRAKG-YNPRDYYESNPELKRVLDQIASGTF 635
                         650       660       670       680       690       700       710
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 169293982  732 I-ENREEFRVIFEELMNKNDEYFLLADYDSYCQAQMKVRDLYKNRHNWAKICLINIAKSGFFSSDRTIQEYVDDIWHL 808
Cdd:pfam00343 636 SpGDPGLFRPLVDSLLNGGDPYLVLADFESYVDAQERVDAAYRDREEWTRMSILNIARSGKFSSDRTIREYAEDIWKV 713
 
Name Accession Description Interval E-value
Phosphorylase pfam00343
Carbohydrate phosphorylase; The members of this family catalyze the formation of glucose ...
108-808 0e+00

Carbohydrate phosphorylase; The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin.


Pssm-ID: 459770  Cd Length: 713  Bit Score: 1219.10  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  108 LAEFGINIHDLEELESDAglgngglgrlAACFMDSLASLAYPGHGHTIRYEFGLFKQKIENGYQIELPDQWMQTGFNWEV 187
Cdd:pfam00343   1 LAELGLDLEELEEQEPDAglgngglgrlAACFLDSLATLGLPAYGYGIRYEYGLFKQKIVDGWQVELPDNWLRFGNPWEI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  188 RKPKHRVPVKFFGKIV--YNDATGKYEHIDTEEVYAVPYDVPIIGNDTTTTNTLRLWGAEASENIpanqDFR-----HYI 260
Cdd:pfam00343  81 RRPEVAVEVKFGGRVEeyTDGGRLRVRWVPGETVLAVPYDTPIPGYGTNTVNTLRLWSAEASEEF----DLDafnagDYI 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  261 QNVRD------ICQMLYPDDSTPAGKMLRLKQEYFFTCAGLSSIVKAHLRNYPNLDNFHEKNVIQLNDTHPVLAIPELMR 334
Cdd:pfam00343 157 RAVEEknraenISKVLYPNDSTEEGKELRLKQQYFFVSASLQDIIRRFKKGGGDLDELPDKVAIQLNDTHPALAIPELMR 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  335 ILIDEKGYEWDDAWDITTQTFAYTNHTILAEALETWPIDVMQTLLPRIYQIIEEIHRRFIGYVKMVSNRDEELLNRVMIL 414
Cdd:pfam00343 237 ILVDEEGLGWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFERLLPRHLEIIYEINRRFLEEVRAKFPGDEDRLRRMSII 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  415 ---RDGLVYMARLAIVGSFSVNGVAKLHSDILVERELRDFAVLYPNKFNNKTNGVTHRRWLAYCNPQLASLITEYIGDEW 491
Cdd:pfam00343 317 eegGDKQVRMAHLAIVGSHSVNGVAALHTELLKETVFKDFYELYPEKFNNKTNGITPRRWLLLANPELAALITETIGDGW 396
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  492 IKHPEKLEDLMNYVDDVNLQERFLEVKKERKQVLADYILKHNGIKVDVDSIFDIQVKRLHAYKRQLLNILHVIDLYFRMK 571
Cdd:pfam00343 397 ITDLDQLKKLEPFADDPAFLERWRAIKQANKQRLAAYIKKTTGIEVDPDSIFDVQVKRIHEYKRQLLNALHIITLYNRIK 476
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  572 ENPDYRIEPRTFIFGAKAASGYYFAKKVIKLINSVGDVVNNDPETNKYLKVIFLENYGVTLAEKIMPAADVSEQISTAGK 651
Cdd:pfam00343 477 ENPNADIVPRTFIFGGKAAPGYYMAKLIIKLINSVAEVVNNDPDVNDKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGK 556
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  652 EASGTGNMKFMMNGAITLGTLDGANVEISQLVGDENCVIFGLKDHEVKELQVNGsYHAWDVYNNNPRIRRVIDSLMDGTF 731
Cdd:pfam00343 557 EASGTGNMKFMLNGALTIGTLDGANVEIREEVGEENIFIFGLTAEEVEALRAKG-YNPRDYYESNPELKRVLDQIASGTF 635
                         650       660       670       680       690       700       710
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 169293982  732 I-ENREEFRVIFEELMNKNDEYFLLADYDSYCQAQMKVRDLYKNRHNWAKICLINIAKSGFFSSDRTIQEYVDDIWHL 808
Cdd:pfam00343 636 SpGDPGLFRPLVDSLLNGGDPYLVLADFESYVDAQERVDAAYRDREEWTRMSILNIARSGKFSSDRTIREYAEDIWKV 713
GT35_Glycogen_Phosphorylase cd04300
glycogen phosphorylase and similar proteins; This is a family of oligosaccharide ...
24-808 0e+00

glycogen phosphorylase and similar proteins; This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.


Pssm-ID: 340853 [Multi-domain]  Cd Length: 795  Bit Score: 1199.27  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  24 KYEFSKRIIETYGRTVEESHITEKFLVLELMVRDYASVNWATSKALIRNNNQKQMHYFSMEFLMGRLLVNNMMNLGIYDI 103
Cdd:cd04300    1 KKSFVRHLEYTLGKDREEATPQDLYQALAYSVRDRLIERWNETQQYYYEKDPKRVYYLSLEFLMGRLLGNNLLNLGLYDE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 104 AKEGLAEFGINIHDLEELESDAGLGNGGLGRLAACFMDSLASLAYPGHGHTIRYEFGLFKQKIENGYQIELPDQWMQTGF 183
Cdd:cd04300   81 VREALAELGLDLEDLEEEEPDAALGNGGLGRLAACFLDSMATLGLPAWGYGIRYEYGLFKQKIVDGYQVELPDYWLRYGN 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 184 NWEVRKPKHRVPVKFFGKI--VYNDATGKYEHIDTEEVYAVPYDVPIIGNDTTTTNTLRLWGAEASENIPANQDFR-HYI 260
Cdd:cd04300  161 PWEIRRPEVSVPVRFGGRVeeVPDGGRLRVRWVDGETVLAVPYDTPIPGYGTNTVNTLRLWSAKASDEFDLEAFNEgDYI 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 261 QNVRD------ICQMLYPDDSTPAGKMLRLKQEYFFTCAGLSSIVKAHLRNYPNLDNFHEKNVIQLNDTHPVLAIPELMR 334
Cdd:cd04300  241 RAVEQknraenISRVLYPNDSTYEGKELRLKQQYFFVSASLQDIIRRFKKSHGPLSEFPDKVAIQLNDTHPALAIPELMR 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 335 ILIDEKGYEWDDAWDITTQTFAYTNHTILAEALETWPIDVMQTLLPRIYQIIEEIHRRFIGYVKMVSNRDEELLNRVMIL 414
Cdd:cd04300  321 ILVDEEGLSWDEAWDITTKTFAYTNHTVLPEALEKWPVELFEKLLPRHLQIIYEINRRFLDEVRAKYPGDVDRIRRMSII 400
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 415 RDG-LVYMARLAIVGSFSVNGVAKLHSDILVERELRDFAVLYPNKFNNKTNGVTHRRWLAYCNPQLASLITEYIGDEWIK 493
Cdd:cd04300  401 EEGkQVRMAHLAIVGSHSVNGVAALHTEILKTTVLKDFYELYPEKFNNKTNGITPRRWLLQANPGLAALITETIGDDWVT 480
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 494 HPEKLEDLMNYVDDVNLQERFLEVKKERKQVLADYILKHNGIKVDVDSIFDIQVKRLHAYKRQLLNILHVIDLYFRMKEN 573
Cdd:cd04300  481 DLDQLKKLEPFADDPEFLEEWAAIKQANKARLAAYIKETTGVEVNPNSIFDVQVKRIHEYKRQLLNILHIIYLYLRIKEG 560
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 574 PDYRIEPRTFIFGAKAASGYYFAKKVIKLINSVGDVVNNDPETNKYLKVIFLENYGVTLAEKIMPAADVSEQISTAGKEA 653
Cdd:cd04300  561 PPADFVPRTVIFGGKAAPGYYLAKLIIKLINAVADVVNNDPDVGDKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEA 640
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 654 SGTGNMKFMMNGAITLGTLDGANVEISQLVGDENCVIFGLKDHEVKELQVNGSYHaWDVYNNNPRIRRVIDSLMDGTF-I 732
Cdd:cd04300  641 SGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFIFGLTAEEVEALRKNGYYP-ADYYENDPRLKRVLDQIISGTFsP 719
                        730       740       750       760       770       780       790
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 169293982 733 ENREEFRVIFEELMNKNDEYFLLADYDSYCQAQMKVRDLYKNRHNWAKICLINIAKSGFFSSDRTIQEYVDDIWHL 808
Cdd:cd04300  720 GDPDEFRPLVDSLLNGNDEYLVLADFESYVDAQEKVDALYRDQEEWARKSILNIARSGKFSSDRTIREYAKDIWNV 795
GlgP COG0058
Glucan phosphorylase [Carbohydrate transport and metabolism];
16-808 0e+00

Glucan phosphorylase [Carbohydrate transport and metabolism];


Pssm-ID: 439828 [Multi-domain]  Cd Length: 795  Bit Score: 1126.39  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  16 MFKTKEEFKYEFSKRIIETYGRTVEESHITEKFLVLELMVRDYASVNWATSKALIRNNNQKQMHYFSMEFLMGRLLVNNM 95
Cdd:COG0058    1 LALNAEELFRAIDPELWETLGKRLEEAAADDWFLALAAAVRDYLSPRWFQTNRAYPDQKAKRVAYFSAEFLLGRSLGNNL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  96 MNLGIYDIAKEGLAEFGINIHDLEELESDAglgngglgrlAACFMDSLASLAYPGHGHTIRYEFGLFKQKIENGYQIELP 175
Cdd:COG0058   81 LNLGLYDEVREALAELGLDLEDLLEQEPDLplgngglgrlAADFLKSASDLGLPAVGYGLRYEYGYFRQRIDDGWQVERP 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 176 DQWMQTGFNWEVRKPKHRVPVKFFgkivynDATGKYEHidteeVYAVPYDVPIIGNDTTTTNTLRLWGAEASE------- 248
Cdd:COG0058  161 DNWLRYGDPWELPRPEPAVEVKFG------DEDGRTED-----VLAVPYDVPIPGYRNNTVNTLRLWKAEASEevglylf 229
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 249 ------NIPANQDFrhyiqnVRDICQMLYPDDSTPAGKMLRLKQEYFFTCAGLSSIVKAHLRNYPNLDNFHEKNVIQLND 322
Cdd:COG0058  230 dagdytDAVENKPE------DRNITKVLYPGDSEEAGKELRLRQEYFLGSGGVRDLRRLHLKTGGDLDGLPEPVVIHLND 303
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 323 THPVLAIPELMRILIDEKGYEWDDAWDITTQTFAYTNHTILAEALETWPIDVMQTLLPRIYQIIEEIHRRFIGYVKMVSN 402
Cdd:COG0058  304 THPAFAILELMRLLVDEHGLSWDEAWEITRATFVFTNHTPVPEALERWPVDLFERLLPRHLEIIGEINRRFLEEVRARPG 383
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 403 rDEELLNRVMILRDGLVYMARLAIVGSFSVNGVAKLHSDILVERELRDFAVLYPNKFNNKTNGVTHRRWLAYCNPQLASL 482
Cdd:COG0058  384 -DRERLLRLGIIDEGQFRMAHLALRGSHSVNGVSALHGEVLRETMFADFYPLWPVPFTNVTNGVHPRRWLLLANPELAEL 462
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 483 ITEYIGDEWIKHPEKLEDLMNYVDDVNLQERFLEVKKERKQVLADYILKHNGIKVDVDSIFDIQVKRLHAYKRQLLNILH 562
Cdd:COG0058  463 ITEYIGDGWITDLELLEKLEPIADDPAFQEELWEVKQANKERLAAYIRERTGIVLDPDALFDGFAKRFHEYKRQLLNLLH 542
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 563 VIDLYFRMKENPDYRIEPRTFIFGAKAASGYYFAKKVIKLINSVGDVVNNDPETNKYLKVIFLENYGVTLAEKIMPAADV 642
Cdd:COG0058  543 DIERYNRILNNPNLDERPRQFIFAGKAAPGDEMGKLIIKLINAVARVPNNDPRVEFRLKVVFLENYDVSLAEKLVPGADV 622
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 643 SEQISTAGKEASGTGNMKFMMNGAITLGTLDGANVEISQLVGDENCVIFGLKDHEVKELQvnGSYHAWDVYNNNPRIRRV 722
Cdd:COG0058  623 WEQIPTAGKEASGTSGMKFALNGALTLGTLDGANVEIYEEVGDENGFAFGLTAEEVEALR--AKYNPRDYYEADPELRRV 700
                        730       740       750       760       770       780       790       800
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 723 IDSLMDGTFIENREEFRVIFEELMNkNDEYFLLADYDSYCQAQMKVRDLYKNRHNWAKICLINIAKSGFFSSDRTIQEYV 802
Cdd:COG0058  701 LDQLASGYFSPDPEEFRALYDLLLG-GDPYLVLADFASYVDAEEEVDPLYRRPERWVRMMILNIARLGKFSSDRMIREYA 779

                 ....*.
gi 169293982 803 DDIWHL 808
Cdd:COG0058  780 ERIWKL 785
P_ylase TIGR02093
glycogen/starch/alpha-glucan phosphorylases; This family consists of phosphorylases. Members ...
27-808 0e+00

glycogen/starch/alpha-glucan phosphorylases; This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. [Energy metabolism, Biosynthesis and degradation of polysaccharides]


Pssm-ID: 273967  Cd Length: 794  Bit Score: 1104.64  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982   27 FSKRIIETYGRTVEESHITEKFLVLELMVRDYASVNWATSKALIRNNNQKQMHYFSMEFLMGRLLVNNMMNLGIYDIAKE 106
Cdd:TIGR02093   1 ILYHLEYTYGKTIDDATPRDLYTALAKAVRDRLVDRWLETQEKYRDNNQKQVYYLSAEFLMGRLLGNNLLNLGLYDEVKE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  107 GLAEFGINIHDLEELESDAGLGNGGLGRLAACFMDSLASLAYPGHGHTIRYEFGLFKQKIENGYQIELPDQWMQTGFNWE 186
Cdd:TIGR02093  81 ALRELGLDLEEILEIENDAGLGNGGLGRLAACFLDSLATLGLPATGYGIRYEYGLFKQKIVDGWQVELPDDWLRYGNPWE 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  187 VRKPKHRVPVKFFGKI--VYNDATGKYEHIDTEEVYAVPYDVPIIGNDTTTTNTLRLWGAEASE-------NIPANQDFR 257
Cdd:TIGR02093 161 IRRPDRSYEVRFGGRVelQPDSDRLRPRWVPAETVLAIPYDVPVPGYRTDTVNTLRLWSAEAPEefdldafNAGDYYEAV 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  258 HYIQNVRDICQMLYPDDSTPAGKMLRLKQEYFFTCAGLSSIVKAHLRNYPNLDNFHEKNVIQLNDTHPVLAIPELMRILI 337
Cdd:TIGR02093 241 EEKNRAENISRVLYPNDSTYEGKELRLKQQYFFVSASLQDIIRRHLETHPDLSDFPKKVAIQLNDTHPALAIPELMRLLI 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  338 DEKGYEWDDAWDITTQTFAYTNHTILAEALETWPIDVMQTLLPRIYQIIEEIHRRFIGYVKMVSNRDEELLNRVMILRDG 417
Cdd:TIGR02093 321 DEEGMDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFQKLLPRHLEIIYEINRRFLAELAAKGPGDEAKIRRMSIIEEG 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  418 ---LVYMARLAIVGSFSVNGVAKLHSDILVERELRDFAVLYPNKFNNKTNGVTHRRWLAYCNPQLASLITEYIGDEWIKH 494
Cdd:TIGR02093 401 qskRVRMANLAIVGSHSVNGVAALHTELLKEDLLKDFYELYPEKFNNKTNGITPRRWLRLANPGLSALLTETIGDDWLTD 480
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  495 PEKLEDLMNYVDDVNLQERFLEVKKERKQVLADYILKHNGIKVDVDSIFDIQVKRLHAYKRQLLNILHVIDLYFRMKENP 574
Cdd:TIGR02093 481 LDLLKKLEPYADDSEFLEEFRQVKQANKQRLAAYIKEHTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDP 560
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  575 DYRIEPRTFIFGAKAASGYYFAKKVIKLINSVGDVVNNDPETNKYLKVIFLENYGVTLAEKIMPAADVSEQISTAGKEAS 654
Cdd:TIGR02093 561 PKDIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVGDKLKVVFVPNYNVSLAELIIPAADLSEQISTAGKEAS 640
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  655 GTGNMKFMMNGAITLGTLDGANVEISQLVGDENCVIFGLKDHEVKELQVNGSYHAwDVYNNNPRIRRVIDSLMDGTF-IE 733
Cdd:TIGR02093 641 GTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFIFGLTVEEVEALREKGYNPR-EYYEADPELKRVLDLISSGTFsPG 719
                         730       740       750       760       770       780       790
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 169293982  734 NREEFRVIFEELMNKNDEYFLLADYDSYCQAQMKVRDLYKNRHNWAKICLINIAKSGFFSSDRTIQEYVDDIWHL 808
Cdd:TIGR02093 720 DPGLFRPLYDSLLNHGDPFFVLADFAAYVDAQERVDALYRDQLEWTKKSILNIANSGKFSSDRTIREYAKEIWHV 794
PRK14986 PRK14986
glycogen phosphorylase; Provisional
53-812 0e+00

glycogen phosphorylase; Provisional


Pssm-ID: 184948 [Multi-domain]  Cd Length: 815  Bit Score: 775.16  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  53 LMVRDYASVNWATSKALIRNNNQKQMHYFSMEFLMGRLLVNNMMNLGIYDIAKEGLAEFGINIHDLEELESDAGLGNGGL 132
Cdd:PRK14986  47 FAVRDRLVERWLRSNRAQLSQETRQVYYLSMEFLIGRTLSNALLSLGIYDDVQGALEAMGLDLEELIDEENDPGLGNGGL 126
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 133 GRLAACFMDSLASLAYPGHGHTIRYEFGLFKQKIENGYQIELPDQWMQTGFNWEVRKPKHRVPVKFFGKIVYNDATGKYe 212
Cdd:PRK14986 127 GRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNIVNGRQKESPDYWLEYGNPWEFKRHNTRYKVRFGGRIQQEGKKTRW- 205
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 213 hIDTEEVYAVPYDVPIIGNDTTTTNTLRLWGAEASENI---PANQDfrHYIQNVRD------ICQMLYPDDSTPAGKMLR 283
Cdd:PRK14986 206 -IETEEILAVAYDQIIPGYDTDATNTLRLWSAQASSEInlgKFNQG--DYFAAVEDknhsenVSRVLYPDDSTYSGRELR 282
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 284 LKQEYFFTCAGLSSIVKAHLRNYPNLDNFHEKNVIQLNDTHPVLAIPELMRILIDEKGYEWDDAWDITTQTFAYTNHTIL 363
Cdd:PRK14986 283 LRQEYFLVSATVQDILSRHYQLHKTYDNLADKIAIHLNDTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLM 362
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 364 AEALETWPIDVMQTLLPRIYQIIEEIHRRFIGYVKMVSNRDEELLNRVMILRDG---LVYMARLAIVGSFSVNGVAKLHS 440
Cdd:PRK14986 363 SEALETWPVDMLGKILPRHLQIIFEINDYFLKTLQEQYPNDTDLLGRASIIDESngrRVRMAWLAVVVSHKVNGVSELHS 442
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 441 DILVERELRDFAVLYPNKFNNKTNGVTHRRWLAYCNPQLASLITEYIGDEWIKHPEKLEDLMNYVDDVNLQERFLEVKKE 520
Cdd:PRK14986 443 NLMVQSLFADFAKIFPGRFCNVTNGVTPRRWLALANPSLSAVLDEHIGRTWRTDLSQLSELKQHCDYPMVNHAVRQAKLE 522
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 521 RKQVLADYILKHNGIKVDVDSIFDIQVKRLHAYKRQLLNILHVIDLYFRMKENPDYRIEPRTFIFGAKAASGYYFAKKVI 600
Cdd:PRK14986 523 NKKRLAEYIAQQLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYMAKHII 602
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 601 KLINSVGDVVNNDPETNKYLKVIFLENYGVTLAEKIMPAADVSEQISTAGKEASGTGNMKFMMNGAITLGTLDGANVEIS 680
Cdd:PRK14986 603 HLINDVAKVINNDPQIGDKLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEML 682
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 681 QLVGDENCVIFGLKDHEVKELQVNGsYHAWDVYNNNPRIRRVIDSLMDGTFI-ENREEFRVIFEELMNKNDEYFLLADYD 759
Cdd:PRK14986 683 EHVGEENIFIFGNTAEEVEALRRQG-YKPREYYEKDEELHQVLTQIGSGVFSpEEPGRYRDLVDSLINFGDHYQVLADYR 761
                        730       740       750       760       770
                 ....*....|....*....|....*....|....*....|....*....|...
gi 169293982 760 SYCQAQMKVRDLYKNRHNWAKICLINIAKSGFFSSDRTIQEYVDDIWHLEKLK 812
Cdd:PRK14986 762 SYVDCQDKVDELYRNQEEWTRKAMLNIANMGYFSSDRTIKEYADEIWHIDPVR 814
 
Name Accession Description Interval E-value
Phosphorylase pfam00343
Carbohydrate phosphorylase; The members of this family catalyze the formation of glucose ...
108-808 0e+00

Carbohydrate phosphorylase; The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin.


Pssm-ID: 459770  Cd Length: 713  Bit Score: 1219.10  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  108 LAEFGINIHDLEELESDAglgngglgrlAACFMDSLASLAYPGHGHTIRYEFGLFKQKIENGYQIELPDQWMQTGFNWEV 187
Cdd:pfam00343   1 LAELGLDLEELEEQEPDAglgngglgrlAACFLDSLATLGLPAYGYGIRYEYGLFKQKIVDGWQVELPDNWLRFGNPWEI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  188 RKPKHRVPVKFFGKIV--YNDATGKYEHIDTEEVYAVPYDVPIIGNDTTTTNTLRLWGAEASENIpanqDFR-----HYI 260
Cdd:pfam00343  81 RRPEVAVEVKFGGRVEeyTDGGRLRVRWVPGETVLAVPYDTPIPGYGTNTVNTLRLWSAEASEEF----DLDafnagDYI 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  261 QNVRD------ICQMLYPDDSTPAGKMLRLKQEYFFTCAGLSSIVKAHLRNYPNLDNFHEKNVIQLNDTHPVLAIPELMR 334
Cdd:pfam00343 157 RAVEEknraenISKVLYPNDSTEEGKELRLKQQYFFVSASLQDIIRRFKKGGGDLDELPDKVAIQLNDTHPALAIPELMR 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  335 ILIDEKGYEWDDAWDITTQTFAYTNHTILAEALETWPIDVMQTLLPRIYQIIEEIHRRFIGYVKMVSNRDEELLNRVMIL 414
Cdd:pfam00343 237 ILVDEEGLGWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFERLLPRHLEIIYEINRRFLEEVRAKFPGDEDRLRRMSII 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  415 ---RDGLVYMARLAIVGSFSVNGVAKLHSDILVERELRDFAVLYPNKFNNKTNGVTHRRWLAYCNPQLASLITEYIGDEW 491
Cdd:pfam00343 317 eegGDKQVRMAHLAIVGSHSVNGVAALHTELLKETVFKDFYELYPEKFNNKTNGITPRRWLLLANPELAALITETIGDGW 396
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  492 IKHPEKLEDLMNYVDDVNLQERFLEVKKERKQVLADYILKHNGIKVDVDSIFDIQVKRLHAYKRQLLNILHVIDLYFRMK 571
Cdd:pfam00343 397 ITDLDQLKKLEPFADDPAFLERWRAIKQANKQRLAAYIKKTTGIEVDPDSIFDVQVKRIHEYKRQLLNALHIITLYNRIK 476
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  572 ENPDYRIEPRTFIFGAKAASGYYFAKKVIKLINSVGDVVNNDPETNKYLKVIFLENYGVTLAEKIMPAADVSEQISTAGK 651
Cdd:pfam00343 477 ENPNADIVPRTFIFGGKAAPGYYMAKLIIKLINSVAEVVNNDPDVNDKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGK 556
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  652 EASGTGNMKFMMNGAITLGTLDGANVEISQLVGDENCVIFGLKDHEVKELQVNGsYHAWDVYNNNPRIRRVIDSLMDGTF 731
Cdd:pfam00343 557 EASGTGNMKFMLNGALTIGTLDGANVEIREEVGEENIFIFGLTAEEVEALRAKG-YNPRDYYESNPELKRVLDQIASGTF 635
                         650       660       670       680       690       700       710
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 169293982  732 I-ENREEFRVIFEELMNKNDEYFLLADYDSYCQAQMKVRDLYKNRHNWAKICLINIAKSGFFSSDRTIQEYVDDIWHL 808
Cdd:pfam00343 636 SpGDPGLFRPLVDSLLNGGDPYLVLADFESYVDAQERVDAAYRDREEWTRMSILNIARSGKFSSDRTIREYAEDIWKV 713
GT35_Glycogen_Phosphorylase cd04300
glycogen phosphorylase and similar proteins; This is a family of oligosaccharide ...
24-808 0e+00

glycogen phosphorylase and similar proteins; This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.


Pssm-ID: 340853 [Multi-domain]  Cd Length: 795  Bit Score: 1199.27  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  24 KYEFSKRIIETYGRTVEESHITEKFLVLELMVRDYASVNWATSKALIRNNNQKQMHYFSMEFLMGRLLVNNMMNLGIYDI 103
Cdd:cd04300    1 KKSFVRHLEYTLGKDREEATPQDLYQALAYSVRDRLIERWNETQQYYYEKDPKRVYYLSLEFLMGRLLGNNLLNLGLYDE 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 104 AKEGLAEFGINIHDLEELESDAGLGNGGLGRLAACFMDSLASLAYPGHGHTIRYEFGLFKQKIENGYQIELPDQWMQTGF 183
Cdd:cd04300   81 VREALAELGLDLEDLEEEEPDAALGNGGLGRLAACFLDSMATLGLPAWGYGIRYEYGLFKQKIVDGYQVELPDYWLRYGN 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 184 NWEVRKPKHRVPVKFFGKI--VYNDATGKYEHIDTEEVYAVPYDVPIIGNDTTTTNTLRLWGAEASENIPANQDFR-HYI 260
Cdd:cd04300  161 PWEIRRPEVSVPVRFGGRVeeVPDGGRLRVRWVDGETVLAVPYDTPIPGYGTNTVNTLRLWSAKASDEFDLEAFNEgDYI 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 261 QNVRD------ICQMLYPDDSTPAGKMLRLKQEYFFTCAGLSSIVKAHLRNYPNLDNFHEKNVIQLNDTHPVLAIPELMR 334
Cdd:cd04300  241 RAVEQknraenISRVLYPNDSTYEGKELRLKQQYFFVSASLQDIIRRFKKSHGPLSEFPDKVAIQLNDTHPALAIPELMR 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 335 ILIDEKGYEWDDAWDITTQTFAYTNHTILAEALETWPIDVMQTLLPRIYQIIEEIHRRFIGYVKMVSNRDEELLNRVMIL 414
Cdd:cd04300  321 ILVDEEGLSWDEAWDITTKTFAYTNHTVLPEALEKWPVELFEKLLPRHLQIIYEINRRFLDEVRAKYPGDVDRIRRMSII 400
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 415 RDG-LVYMARLAIVGSFSVNGVAKLHSDILVERELRDFAVLYPNKFNNKTNGVTHRRWLAYCNPQLASLITEYIGDEWIK 493
Cdd:cd04300  401 EEGkQVRMAHLAIVGSHSVNGVAALHTEILKTTVLKDFYELYPEKFNNKTNGITPRRWLLQANPGLAALITETIGDDWVT 480
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 494 HPEKLEDLMNYVDDVNLQERFLEVKKERKQVLADYILKHNGIKVDVDSIFDIQVKRLHAYKRQLLNILHVIDLYFRMKEN 573
Cdd:cd04300  481 DLDQLKKLEPFADDPEFLEEWAAIKQANKARLAAYIKETTGVEVNPNSIFDVQVKRIHEYKRQLLNILHIIYLYLRIKEG 560
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 574 PDYRIEPRTFIFGAKAASGYYFAKKVIKLINSVGDVVNNDPETNKYLKVIFLENYGVTLAEKIMPAADVSEQISTAGKEA 653
Cdd:cd04300  561 PPADFVPRTVIFGGKAAPGYYLAKLIIKLINAVADVVNNDPDVGDKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEA 640
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 654 SGTGNMKFMMNGAITLGTLDGANVEISQLVGDENCVIFGLKDHEVKELQVNGSYHaWDVYNNNPRIRRVIDSLMDGTF-I 732
Cdd:cd04300  641 SGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFIFGLTAEEVEALRKNGYYP-ADYYENDPRLKRVLDQIISGTFsP 719
                        730       740       750       760       770       780       790
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 169293982 733 ENREEFRVIFEELMNKNDEYFLLADYDSYCQAQMKVRDLYKNRHNWAKICLINIAKSGFFSSDRTIQEYVDDIWHL 808
Cdd:cd04300  720 GDPDEFRPLVDSLLNGNDEYLVLADFESYVDAQEKVDALYRDQEEWARKSILNIARSGKFSSDRTIREYAKDIWNV 795
GlgP COG0058
Glucan phosphorylase [Carbohydrate transport and metabolism];
16-808 0e+00

Glucan phosphorylase [Carbohydrate transport and metabolism];


Pssm-ID: 439828 [Multi-domain]  Cd Length: 795  Bit Score: 1126.39  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  16 MFKTKEEFKYEFSKRIIETYGRTVEESHITEKFLVLELMVRDYASVNWATSKALIRNNNQKQMHYFSMEFLMGRLLVNNM 95
Cdd:COG0058    1 LALNAEELFRAIDPELWETLGKRLEEAAADDWFLALAAAVRDYLSPRWFQTNRAYPDQKAKRVAYFSAEFLLGRSLGNNL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  96 MNLGIYDIAKEGLAEFGINIHDLEELESDAglgngglgrlAACFMDSLASLAYPGHGHTIRYEFGLFKQKIENGYQIELP 175
Cdd:COG0058   81 LNLGLYDEVREALAELGLDLEDLLEQEPDLplgngglgrlAADFLKSASDLGLPAVGYGLRYEYGYFRQRIDDGWQVERP 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 176 DQWMQTGFNWEVRKPKHRVPVKFFgkivynDATGKYEHidteeVYAVPYDVPIIGNDTTTTNTLRLWGAEASE------- 248
Cdd:COG0058  161 DNWLRYGDPWELPRPEPAVEVKFG------DEDGRTED-----VLAVPYDVPIPGYRNNTVNTLRLWKAEASEevglylf 229
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 249 ------NIPANQDFrhyiqnVRDICQMLYPDDSTPAGKMLRLKQEYFFTCAGLSSIVKAHLRNYPNLDNFHEKNVIQLND 322
Cdd:COG0058  230 dagdytDAVENKPE------DRNITKVLYPGDSEEAGKELRLRQEYFLGSGGVRDLRRLHLKTGGDLDGLPEPVVIHLND 303
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 323 THPVLAIPELMRILIDEKGYEWDDAWDITTQTFAYTNHTILAEALETWPIDVMQTLLPRIYQIIEEIHRRFIGYVKMVSN 402
Cdd:COG0058  304 THPAFAILELMRLLVDEHGLSWDEAWEITRATFVFTNHTPVPEALERWPVDLFERLLPRHLEIIGEINRRFLEEVRARPG 383
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 403 rDEELLNRVMILRDGLVYMARLAIVGSFSVNGVAKLHSDILVERELRDFAVLYPNKFNNKTNGVTHRRWLAYCNPQLASL 482
Cdd:COG0058  384 -DRERLLRLGIIDEGQFRMAHLALRGSHSVNGVSALHGEVLRETMFADFYPLWPVPFTNVTNGVHPRRWLLLANPELAEL 462
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 483 ITEYIGDEWIKHPEKLEDLMNYVDDVNLQERFLEVKKERKQVLADYILKHNGIKVDVDSIFDIQVKRLHAYKRQLLNILH 562
Cdd:COG0058  463 ITEYIGDGWITDLELLEKLEPIADDPAFQEELWEVKQANKERLAAYIRERTGIVLDPDALFDGFAKRFHEYKRQLLNLLH 542
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 563 VIDLYFRMKENPDYRIEPRTFIFGAKAASGYYFAKKVIKLINSVGDVVNNDPETNKYLKVIFLENYGVTLAEKIMPAADV 642
Cdd:COG0058  543 DIERYNRILNNPNLDERPRQFIFAGKAAPGDEMGKLIIKLINAVARVPNNDPRVEFRLKVVFLENYDVSLAEKLVPGADV 622
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 643 SEQISTAGKEASGTGNMKFMMNGAITLGTLDGANVEISQLVGDENCVIFGLKDHEVKELQvnGSYHAWDVYNNNPRIRRV 722
Cdd:COG0058  623 WEQIPTAGKEASGTSGMKFALNGALTLGTLDGANVEIYEEVGDENGFAFGLTAEEVEALR--AKYNPRDYYEADPELRRV 700
                        730       740       750       760       770       780       790       800
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 723 IDSLMDGTFIENREEFRVIFEELMNkNDEYFLLADYDSYCQAQMKVRDLYKNRHNWAKICLINIAKSGFFSSDRTIQEYV 802
Cdd:COG0058  701 LDQLASGYFSPDPEEFRALYDLLLG-GDPYLVLADFASYVDAEEEVDPLYRRPERWVRMMILNIARLGKFSSDRMIREYA 779

                 ....*.
gi 169293982 803 DDIWHL 808
Cdd:COG0058  780 ERIWKL 785
P_ylase TIGR02093
glycogen/starch/alpha-glucan phosphorylases; This family consists of phosphorylases. Members ...
27-808 0e+00

glycogen/starch/alpha-glucan phosphorylases; This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. [Energy metabolism, Biosynthesis and degradation of polysaccharides]


Pssm-ID: 273967  Cd Length: 794  Bit Score: 1104.64  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982   27 FSKRIIETYGRTVEESHITEKFLVLELMVRDYASVNWATSKALIRNNNQKQMHYFSMEFLMGRLLVNNMMNLGIYDIAKE 106
Cdd:TIGR02093   1 ILYHLEYTYGKTIDDATPRDLYTALAKAVRDRLVDRWLETQEKYRDNNQKQVYYLSAEFLMGRLLGNNLLNLGLYDEVKE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  107 GLAEFGINIHDLEELESDAGLGNGGLGRLAACFMDSLASLAYPGHGHTIRYEFGLFKQKIENGYQIELPDQWMQTGFNWE 186
Cdd:TIGR02093  81 ALRELGLDLEEILEIENDAGLGNGGLGRLAACFLDSLATLGLPATGYGIRYEYGLFKQKIVDGWQVELPDDWLRYGNPWE 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  187 VRKPKHRVPVKFFGKI--VYNDATGKYEHIDTEEVYAVPYDVPIIGNDTTTTNTLRLWGAEASE-------NIPANQDFR 257
Cdd:TIGR02093 161 IRRPDRSYEVRFGGRVelQPDSDRLRPRWVPAETVLAIPYDVPVPGYRTDTVNTLRLWSAEAPEefdldafNAGDYYEAV 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  258 HYIQNVRDICQMLYPDDSTPAGKMLRLKQEYFFTCAGLSSIVKAHLRNYPNLDNFHEKNVIQLNDTHPVLAIPELMRILI 337
Cdd:TIGR02093 241 EEKNRAENISRVLYPNDSTYEGKELRLKQQYFFVSASLQDIIRRHLETHPDLSDFPKKVAIQLNDTHPALAIPELMRLLI 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  338 DEKGYEWDDAWDITTQTFAYTNHTILAEALETWPIDVMQTLLPRIYQIIEEIHRRFIGYVKMVSNRDEELLNRVMILRDG 417
Cdd:TIGR02093 321 DEEGMDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFQKLLPRHLEIIYEINRRFLAELAAKGPGDEAKIRRMSIIEEG 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  418 ---LVYMARLAIVGSFSVNGVAKLHSDILVERELRDFAVLYPNKFNNKTNGVTHRRWLAYCNPQLASLITEYIGDEWIKH 494
Cdd:TIGR02093 401 qskRVRMANLAIVGSHSVNGVAALHTELLKEDLLKDFYELYPEKFNNKTNGITPRRWLRLANPGLSALLTETIGDDWLTD 480
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  495 PEKLEDLMNYVDDVNLQERFLEVKKERKQVLADYILKHNGIKVDVDSIFDIQVKRLHAYKRQLLNILHVIDLYFRMKENP 574
Cdd:TIGR02093 481 LDLLKKLEPYADDSEFLEEFRQVKQANKQRLAAYIKEHTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDP 560
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  575 DYRIEPRTFIFGAKAASGYYFAKKVIKLINSVGDVVNNDPETNKYLKVIFLENYGVTLAEKIMPAADVSEQISTAGKEAS 654
Cdd:TIGR02093 561 PKDIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVGDKLKVVFVPNYNVSLAELIIPAADLSEQISTAGKEAS 640
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  655 GTGNMKFMMNGAITLGTLDGANVEISQLVGDENCVIFGLKDHEVKELQVNGSYHAwDVYNNNPRIRRVIDSLMDGTF-IE 733
Cdd:TIGR02093 641 GTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFIFGLTVEEVEALREKGYNPR-EYYEADPELKRVLDLISSGTFsPG 719
                         730       740       750       760       770       780       790
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 169293982  734 NREEFRVIFEELMNKNDEYFLLADYDSYCQAQMKVRDLYKNRHNWAKICLINIAKSGFFSSDRTIQEYVDDIWHL 808
Cdd:TIGR02093 720 DPGLFRPLYDSLLNHGDPFFVLADFAAYVDAQERVDALYRDQLEWTKKSILNIANSGKFSSDRTIREYAKEIWHV 794
PRK14986 PRK14986
glycogen phosphorylase; Provisional
53-812 0e+00

glycogen phosphorylase; Provisional


Pssm-ID: 184948 [Multi-domain]  Cd Length: 815  Bit Score: 775.16  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  53 LMVRDYASVNWATSKALIRNNNQKQMHYFSMEFLMGRLLVNNMMNLGIYDIAKEGLAEFGINIHDLEELESDAGLGNGGL 132
Cdd:PRK14986  47 FAVRDRLVERWLRSNRAQLSQETRQVYYLSMEFLIGRTLSNALLSLGIYDDVQGALEAMGLDLEELIDEENDPGLGNGGL 126
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 133 GRLAACFMDSLASLAYPGHGHTIRYEFGLFKQKIENGYQIELPDQWMQTGFNWEVRKPKHRVPVKFFGKIVYNDATGKYe 212
Cdd:PRK14986 127 GRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNIVNGRQKESPDYWLEYGNPWEFKRHNTRYKVRFGGRIQQEGKKTRW- 205
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 213 hIDTEEVYAVPYDVPIIGNDTTTTNTLRLWGAEASENI---PANQDfrHYIQNVRD------ICQMLYPDDSTPAGKMLR 283
Cdd:PRK14986 206 -IETEEILAVAYDQIIPGYDTDATNTLRLWSAQASSEInlgKFNQG--DYFAAVEDknhsenVSRVLYPDDSTYSGRELR 282
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 284 LKQEYFFTCAGLSSIVKAHLRNYPNLDNFHEKNVIQLNDTHPVLAIPELMRILIDEKGYEWDDAWDITTQTFAYTNHTIL 363
Cdd:PRK14986 283 LRQEYFLVSATVQDILSRHYQLHKTYDNLADKIAIHLNDTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLM 362
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 364 AEALETWPIDVMQTLLPRIYQIIEEIHRRFIGYVKMVSNRDEELLNRVMILRDG---LVYMARLAIVGSFSVNGVAKLHS 440
Cdd:PRK14986 363 SEALETWPVDMLGKILPRHLQIIFEINDYFLKTLQEQYPNDTDLLGRASIIDESngrRVRMAWLAVVVSHKVNGVSELHS 442
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 441 DILVERELRDFAVLYPNKFNNKTNGVTHRRWLAYCNPQLASLITEYIGDEWIKHPEKLEDLMNYVDDVNLQERFLEVKKE 520
Cdd:PRK14986 443 NLMVQSLFADFAKIFPGRFCNVTNGVTPRRWLALANPSLSAVLDEHIGRTWRTDLSQLSELKQHCDYPMVNHAVRQAKLE 522
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 521 RKQVLADYILKHNGIKVDVDSIFDIQVKRLHAYKRQLLNILHVIDLYFRMKENPDYRIEPRTFIFGAKAASGYYFAKKVI 600
Cdd:PRK14986 523 NKKRLAEYIAQQLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYMAKHII 602
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 601 KLINSVGDVVNNDPETNKYLKVIFLENYGVTLAEKIMPAADVSEQISTAGKEASGTGNMKFMMNGAITLGTLDGANVEIS 680
Cdd:PRK14986 603 HLINDVAKVINNDPQIGDKLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEML 682
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 681 QLVGDENCVIFGLKDHEVKELQVNGsYHAWDVYNNNPRIRRVIDSLMDGTFI-ENREEFRVIFEELMNKNDEYFLLADYD 759
Cdd:PRK14986 683 EHVGEENIFIFGNTAEEVEALRRQG-YKPREYYEKDEELHQVLTQIGSGVFSpEEPGRYRDLVDSLINFGDHYQVLADYR 761
                        730       740       750       760       770
                 ....*....|....*....|....*....|....*....|....*....|...
gi 169293982 760 SYCQAQMKVRDLYKNRHNWAKICLINIAKSGFFSSDRTIQEYVDDIWHLEKLK 812
Cdd:PRK14986 762 SYVDCQDKVDELYRNQEEWTRKAMLNIANMGYFSSDRTIKEYADEIWHIDPVR 814
PRK14985 PRK14985
maltodextrin phosphorylase; Provisional
72-806 0e+00

maltodextrin phosphorylase; Provisional


Pssm-ID: 237881 [Multi-domain]  Cd Length: 798  Bit Score: 771.91  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  72 NNNQKQMHYFSMEFLMGRLLVNNMMNLGIYDIAKEGLAEFGINIHDLEELESDAGLGNGGLGRLAACFMDSLASLAYPGH 151
Cdd:PRK14985  55 VANQRHVNYISMEFLIGRLTGNNLLNLGWYDDVQDVLKAYDINLTDLLEEETDPALGNGGLGRLAACFLDSMATVGQPAT 134
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 152 GHTIRYEFGLFKQKIENGYQIELPDQWMQTGFNWEVRKPKHRVPVKFFGKIVYNDatGKYEHIDTEEVYAVPYDVPIIGN 231
Cdd:PRK14985 135 GYGLNYQYGLFRQSFVDGKQVEAPDDWHRDSYPWFRHNEALDVQVGIGGKVTKQD--GRERWEPAFTITGEAWDLPVVGY 212
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 232 DTTTTNTLRLWGAEASEniPAN-QDFR--HYIQ------NVRDICQMLYPDDSTPAGKMLRLKQEYFfTCA-GLSSIVKA 301
Cdd:PRK14985 213 RNGVAQPLRLWQATHAH--PFDlTKFNdgDFLRaeqqgiDAEKLTKVLYPNDNHTAGKKLRLMQQYF-QCAcSVADILRR 289
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 302 HLRNYPNLDNFHEKNVIQLNDTHPVLAIPELMRILIDEKGYEWDDAWDITTQTFAYTNHTILAEALETWPIDVMQTLLPR 381
Cdd:PRK14985 290 HHLAGRKLHELPDYEVIQLNDTHPTIAIPELLRVLLDEHQLSWDDAWAITSKTFAYTNHTLMPEALECWDEKLVKSLLPR 369
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 382 IYQIIEEIHRRFIGYVKMVSNRDEELLNRVMILRDGLVYMARLAIVGSFSVNGVAKLHSDILVERELRDFAVLYPNKFNN 461
Cdd:PRK14985 370 HMQIIKEINTRFKTLVEKTWPGDKKVWAKLAVVHDKQVRMANLCVVSGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHN 449
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 462 KTNGVTHRRWLAYCNPQLASLITEYIGDEWIKHPEKLEDLMNYVDDVNLQERFLEVKKERKQVLADYILKHNGIKVDVDS 541
Cdd:PRK14985 450 VTNGITPRRWIKQCNPALAALLDKTLKKEWANDLDQLINLEKYADDAAFRQQYREIKQANKVRLAEFVKQRTGIEINPQA 529
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 542 IFDIQVKRLHAYKRQLLNILHVIDLYFRMKENPDYRIEPRTFIFGAKAASGYYFAKKVIKLINSVGDVVNNDPETNKYLK 621
Cdd:PRK14985 530 IFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVINNDPLVGDKLK 609
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 622 VIFLENYGVTLAEKIMPAADVSEQISTAGKEASGTGNMKFMMNGAITLGTLDGANVEISQLVGDENCVIFGLKDHEVKEL 701
Cdd:PRK14985 610 VVFLPDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFIFGHTVEQVKAL 689
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 702 QVNGsYHAWDVYNNNPRIRRVIDSLMDGTFIE-NREEFRVIFEELMNKNDEYFLLADYDSYCQAQMKVRDLYKNRHNWAK 780
Cdd:PRK14985 690 LAKG-YDPVKWRKKDKVLDAVLKELESGKYSDgDKHAFDQMLHSLKQGGDPYLVLADFAAYVEAQKQVDALYRDQEAWTR 768
                        730       740
                 ....*....|....*....|....*.
gi 169293982 781 ICLINIAKSGFFSSDRTIQEYVDDIW 806
Cdd:PRK14985 769 AAILNTARCGMFSSDRSIRDYQARIW 794
more_P_ylases TIGR02094
alpha-glucan phosphorylases; This family consists of known phosphorylases, and homologs ...
157-674 3.39e-33

alpha-glucan phosphorylases; This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/pfam00343.


Pssm-ID: 273968 [Multi-domain]  Cd Length: 601  Bit Score: 135.92  E-value: 3.39e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  157 YEFGLFKQKI-ENGYQIELPDQwmQTGFNWEVRKPKH------RVPVKFFGKIVYndatgkyehidtEEVYAVPYD-VPI 228
Cdd:TIGR02094  46 YKQGYFRQRLdEDGWQQEAYPN--NDFESLPIEKVLDtdgkwlKISVRIRGRDVY------------AKVWRVQVGrVPL 111
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  229 IGNDTtttntlrlwgaeaseNIPANQDFRhyiqnvRDICQMLYPDDSTpagkmLRLKQEYFFTCAGlssiVKAhLRNYPn 308
Cdd:TIGR02094 112 YLLDT---------------NIPENSEDD------RWITGRLYGGDKE-----MRIAQEIVLGIGG----VRA-LRALG- 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  309 ldnfHEKNVIQLNDTHPVLAIPELMRILIdEKGYEWDDAWDITTQTFAYTNHTILAEALETWPIDVMqtllpriyqiiee 388
Cdd:TIGR02094 160 ----IDPDVYHLNEGHAAFVTLERIRELI-AQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLM------------- 221
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  389 ihRRFIGYVKMVSN--RDEEL-LNRVMILRDGLVYMARLAIVGSFSVNGVAKLHSDilVERELrdFAVLYPNKFNNK--- 462
Cdd:TIGR02094 222 --RKYFGDYAANLGlpREQLLaLGRENPDDPEPFNMTVLALRLSRIANGVSKLHGE--VSRKM--WQFLYPGYEEEEvpi 295
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  463 ---TNGVTHRRWlayCNPQLASLITEYIGDEWIKHP--EKLEDLMNYVDDVNLQERFLEVKKERKQVLADYILKHNG--- 534
Cdd:TIGR02094 296 gyvTNGVHNPTW---VAPELRDLYERYLGENWRELLadEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLrrg 372
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  535 ----IKVDVDSIFDIQV------KRLHAYKRQLLnILHVIDLYFRMKENPDYRIEprtFIFGAKAASGYYFAKKVIKLIN 604
Cdd:TIGR02094 373 adaaILMATDRFLDPDVltigfaRRFATYKRADL-IFRDLERLARILNNPERPVQ---IVFAGKAHPADGEGKEIIQRIV 448
                         490       500       510       520       530       540       550
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982  605 SVGDvvnnDPETNKylKVIFLENYGVTLAEKIMPAADVSEQISTAGKEASGTGNMKFMMNGAITLGTLDG 674
Cdd:TIGR02094 449 EFSK----RPEFRG--RIVFLENYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDG 512
GT35_Glycogen_Phosphorylase-like cd04299
proteins similar to glycogen phosphorylase; This family is most closely related to the ...
249-674 1.60e-30

proteins similar to glycogen phosphorylase; This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism.


Pssm-ID: 340852 [Multi-domain]  Cd Length: 776  Bit Score: 129.01  E-value: 1.60e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 249 NIPANQDFRhyiqnvRDICQMLYPDDSTpagkmLRLKQEYFFTCAGlssiVKAhlrnypnLDNFHEK-NVIQLNDTHPVL 327
Cdd:cd04299  203 DVEENSEDD------RKITDRLYGGDQE-----LRIQQEILLGIGG----IRA-------LRALGIKpDVFHLNEGHAAF 260
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 328 AIPELMRILIDEkGYEWDDAWDITTQTFAYTNHTILAEALETWPIDVMQTLLPRIYQIIEEIHRRFIGYVKMVSNRDEEL 407
Cdd:cd04299  261 LGLERIRELVAE-GLDFDEALELVRASTLFTTHTPVPAGIDRFPPDLVDRYLGGYPELLGLSRDEFLALGREDPPDPGEP 339
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 408 LNrvmilrdglvyMARLAIVGSFSVNGVAKLHSDilVERELrdFAVLYPNKFNNK------TNGVTHRRWLAycnPQLAS 481
Cdd:cd04299  340 FN-----------MAVLALRLSQRANGVSKLHGE--VSREM--FSNLWPGYPPEEvpighvTNGVHTPTWVS---PEMRE 401
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 482 LITEYIGDEWIKHPEkLEDLMNYVDDV----------NLQERFLEVKKERkqvLADYILKHNGIKVDV---DSIFDIQV- 547
Cdd:cd04299  402 LYDRYLGREWRERPT-LEDIWEAVDQIpdeelwevrnTLRKRLVEFVRER---LREQWLRNGAGPAEIaelDNALDPNVl 477
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 169293982 548 -----KRLHAYKRQLLnILHVIDLYFRMKENPDYriePRTFIFGAKAASGYYFAKKVIKLINSVGDvvnnDPETNKylKV 622
Cdd:cd04299  478 tigfaRRFATYKRATL-LLRDPERLARILNNPER---PVQFVFAGKAHPHDEGGKALIREIVRFSR----EPDFRG--RI 547
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|..
gi 169293982 623 IFLENYGVTLAEKIMPAADVSEQISTAGKEASGTGNMKFMMNGAITLGTLDG 674
Cdd:cd04299  548 IFLEDYDMQLARHLVQGVDVWLNNPRRPLEASGTSGMKAALNGGLNLSVLDG 599
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH