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Conserved domains on  [gi|149026244|gb|EDL82487|]
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DnaJ (Hsp40) homolog, subfamily B, member 4, isoform CRA_a [Rattus norvegicus]

Protein Classification

J domain-containing protein( domain architecture ID 1001220)

J domain-containing protein similar to molecular chaperone DnaJ, part of the DnaK-DnaJ-GrpE system, prevents the aggregation of unfolded substrate and acts primarily by stimulating the ATPase activity of Hsp70

CATH:  1.10.287.110
Gene Ontology:  GO:0006457
SCOP:  4000605

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DnaJ_bact super family cl37091
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
4-332 1.87e-67

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


The actual alignment was detected with superfamily member TIGR02349:

Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 215.54  E-value: 1.87e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244    4 DYYHILGIEKGATDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKggaggtdgqg 83
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFN---------- 70
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   84 gtfrytfhgdphatfAAFFGGANPFEIFFGRRMGGGrdseemeidGDPFSAFGfsmnGYPRDRNSVGPSRLKQDPPIIHE 163
Cdd:TIGR02349  71 ---------------GGGGGGGGGFNGFDIGFFGDF---------GDIFGDFF----GGGGGSGRRRRSGPRRGEDLRYD 122
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  164 LKVSLEEIYSGCTKRMKISRKRLNPD------------------------------------------------------ 189
Cdd:TIGR02349 123 LELTFEEAVFGVEKEIEIPRKESCETchgtgakpgtdpktcptcggtgqvrrqqgtpfgffqqqqtcptcggegkiikep 202
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  190 -----GRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPA-DIVFIIKDKEHPKFKRDGSNIVYTAKISLREALC 263
Cdd:TIGR02349 203 cstckGKGRVKERKTITVKIPAGVDTGQRLRVSGKGNAGENGGPNgDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAIL 282
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 149026244  264 GCSINVPTMDGR---NIPMSvtdiVKPGMRRRIIGYGLPFPKNPdQRGDLLIEFDVSFPDVISAASKEILRK 332
Cdd:TIGR02349 283 GGEIEVPTLDGDvklKIPAG----TQSGTVFRLKGKGVPRLRGN-GRGDLLVTVKVETPKNLSKEQKELLEE 349
 
Name Accession Description Interval E-value
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
4-332 1.87e-67

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 215.54  E-value: 1.87e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244    4 DYYHILGIEKGATDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKggaggtdgqg 83
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFN---------- 70
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   84 gtfrytfhgdphatfAAFFGGANPFEIFFGRRMGGGrdseemeidGDPFSAFGfsmnGYPRDRNSVGPSRLKQDPPIIHE 163
Cdd:TIGR02349  71 ---------------GGGGGGGGGFNGFDIGFFGDF---------GDIFGDFF----GGGGGSGRRRRSGPRRGEDLRYD 122
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  164 LKVSLEEIYSGCTKRMKISRKRLNPD------------------------------------------------------ 189
Cdd:TIGR02349 123 LELTFEEAVFGVEKEIEIPRKESCETchgtgakpgtdpktcptcggtgqvrrqqgtpfgffqqqqtcptcggegkiikep 202
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  190 -----GRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPA-DIVFIIKDKEHPKFKRDGSNIVYTAKISLREALC 263
Cdd:TIGR02349 203 cstckGKGRVKERKTITVKIPAGVDTGQRLRVSGKGNAGENGGPNgDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAIL 282
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 149026244  264 GCSINVPTMDGR---NIPMSvtdiVKPGMRRRIIGYGLPFPKNPdQRGDLLIEFDVSFPDVISAASKEILRK 332
Cdd:TIGR02349 283 GGEIEVPTLDGDvklKIPAG----TQSGTVFRLKGKGVPRLRGN-GRGDLLVTVKVETPKNLSKEQKELLEE 349
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
3-336 6.56e-63

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 205.82  E-value: 6.56e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   3 KDYYHILGIEKGATDEDIKKAYRKQALKFHPDKNKSPqaeEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKGGAGgtdgq 82
Cdd:PTZ00037  28 EKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGDP---EKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGEQ----- 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  83 ggtfrytfHGDPHATFAAFFGGanpfeiffGRRMGGGRDSEE-------------------MEIDGDPFSAFGFSMNGyP 143
Cdd:PTZ00037 100 --------PADASDLFDLIFGG--------GRKPGGKKRGEDivshlkvtleqiyngamrkLAINKDVICANCEGHGG-P 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 144 RDR-------NSVG-PSRLKQDPPIIHELKVSLeeiySGCTKRMKI---SRKRLNPDGRSYRSEDKILTIEIKKGWKEGT 212
Cdd:PTZ00037 163 KDAfvdcklcNGQGiRVQIRQMGSMIHQTQSTC----NSCNGQGKIipeSKKCKNCSGKGVKKTRKILEVNIDKGVPNQH 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 213 KITFPREGDETPNSIPADIVFIIKDKEHPKFKRDGSNIVYTAKISLREALCGCSINVPTMDGRNIPMSVT--DIVKPGMR 290
Cdd:PTZ00037 239 KITFHGEADEKPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPpgEVVKPGDI 318
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*...
gi 149026244 291 RRIIGYGLPFPKNPDQRGDLLIEFDVSFP--DVISAASKEILRKHLPA 336
Cdd:PTZ00037 319 KVINNEGMPTYKSPFKKGNLYVTFEVIFPvdRKFTNEEKEILKSLFPQ 366
DnaJ_C cd10747
C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 ...
158-320 1.61e-52

C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70.


Pssm-ID: 199909 [Multi-domain]  Cd Length: 158  Bit Score: 170.30  E-value: 1.61e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 158 PPIIHELKVSLEEIYSGCTKRMKISRKRLnpdgrsYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPA-DIVFIIK 236
Cdd:cd10747    1 ADLRYDLELTLEEAYFGKEKEIKIPRKVT------RVREKKTLTVKIPAGVDDGQRLRLRGEGDAGPNGGPPgDLYVVIR 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 237 DKEHPKFKRDGSNIVYTAKISLREALCGCSINVPTmDGRNIPMSVTDIVKPGMRRRIIGYGLPFPkNPDQRGDLLIEFDV 316
Cdd:cd10747   75 VKPHPVFRRDGNDLYCEVPISLTEALLGGEIEVPT-LGGKVKLKIPPGTQPGTVLRLKGKGMPRL-RGGGRGDLYVEVKV 152

                 ....
gi 149026244 317 SFPD 320
Cdd:cd10747  153 EFPK 156
DnaJ_C pfam01556
DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It ...
160-319 5.16e-46

DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. The two C-terminal domains CTDI and CTDII, both incorporated in this family are necessary for maintaining the J-domains in their specific relative positions. Structural analysis of PDB:1nlt shows that PF00684 is nested within this DnaJ C-terminal region.


Pssm-ID: 460251 [Multi-domain]  Cd Length: 213  Bit Score: 155.49  E-value: 5.16e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  160 IIHELKVSLEEIYSGCTKRMKISRKRLNPD-------------------------------------------------- 189
Cdd:pfam01556   1 LEYELELTLEEAYFGCTKKIKITRNVICDTcggsgakpgtspktcpccggggqvrrqfgffstctccpccggggkiidkc 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  190 ----GRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPNS-IPADIVFIIKDKEHPKFKRDGSNIVYTAKISLREALCG 264
Cdd:pfam01556  81 ckccGGGGVVEKKTLEVKIPAGVDDGQRIRLRGEGDAGENGgPPGDLYVVIRVKPHPVFRRDGDDLYCTVPISLTEALLG 160
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 149026244  265 CSINVPTMDGRnIPMSVTDIVKPGMRRRIIGYGLPFPKnPDQRGDLLIEFDVSFP 319
Cdd:pfam01556 161 GTIEVPTLDGK-VKLKIPAGTQPGTVLRLKGKGMPRLK-GGGRGDLYVTVKVEVP 213
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
4-72 5.13e-35

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 124.43  E-value: 5.13e-35
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   4 DYYHILGIEKGATDEDIKKAYRKQALKFHPDKNKS-PQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGL 72
Cdd:COG0484    1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGdPEAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAE 70
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
3-135 3.56e-31

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 121.85  E-value: 3.56e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   3 KDYYHILGIEKGATDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKGGAGgtdgq 82
Cdd:NF037946   5 RDYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRNKAPDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGVDGEGG----- 79
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 149026244  83 ggtfrytFHGDPHATFAAFFGGANPFEIFFGRRMGGgrdSEEMEIDGDPFSAF 135
Cdd:NF037946  80 -------FGFDAFDVFSSFFETINKSGAFLDDSVDE---SVSADDDLDRLFDD 122
DnaJ smart00271
DnaJ molecular chaperone homology domain;
3-60 2.17e-27

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 101.93  E-value: 2.17e-27
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244     3 KDYYHILGIEKGATDEDIKKAYRKQALKFHPDKNKS--PQAEEKFKEVAEAYEVLSDPKK 60
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGdkEEAEEKFKEINEAYEVLSDPEK 60
 
Name Accession Description Interval E-value
DnaJ_bact TIGR02349
chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the ...
4-332 1.87e-67

chaperone protein DnaJ; This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.


Pssm-ID: 274090 [Multi-domain]  Cd Length: 354  Bit Score: 215.54  E-value: 1.87e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244    4 DYYHILGIEKGATDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKggaggtdgqg 83
Cdd:TIGR02349   1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFN---------- 70
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   84 gtfrytfhgdphatfAAFFGGANPFEIFFGRRMGGGrdseemeidGDPFSAFGfsmnGYPRDRNSVGPSRLKQDPPIIHE 163
Cdd:TIGR02349  71 ---------------GGGGGGGGGFNGFDIGFFGDF---------GDIFGDFF----GGGGGSGRRRRSGPRRGEDLRYD 122
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  164 LKVSLEEIYSGCTKRMKISRKRLNPD------------------------------------------------------ 189
Cdd:TIGR02349 123 LELTFEEAVFGVEKEIEIPRKESCETchgtgakpgtdpktcptcggtgqvrrqqgtpfgffqqqqtcptcggegkiikep 202
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  190 -----GRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPA-DIVFIIKDKEHPKFKRDGSNIVYTAKISLREALC 263
Cdd:TIGR02349 203 cstckGKGRVKERKTITVKIPAGVDTGQRLRVSGKGNAGENGGPNgDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAIL 282
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 149026244  264 GCSINVPTMDGR---NIPMSvtdiVKPGMRRRIIGYGLPFPKNPdQRGDLLIEFDVSFPDVISAASKEILRK 332
Cdd:TIGR02349 283 GGEIEVPTLDGDvklKIPAG----TQSGTVFRLKGKGVPRLRGN-GRGDLLVTVKVETPKNLSKEQKELLEE 349
PTZ00037 PTZ00037
DnaJ_C chaperone protein; Provisional
3-336 6.56e-63

DnaJ_C chaperone protein; Provisional


Pssm-ID: 240236 [Multi-domain]  Cd Length: 421  Bit Score: 205.82  E-value: 6.56e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   3 KDYYHILGIEKGATDEDIKKAYRKQALKFHPDKNKSPqaeEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKGGAGgtdgq 82
Cdd:PTZ00037  28 EKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGDP---EKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGEQ----- 99
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  83 ggtfrytfHGDPHATFAAFFGGanpfeiffGRRMGGGRDSEE-------------------MEIDGDPFSAFGFSMNGyP 143
Cdd:PTZ00037 100 --------PADASDLFDLIFGG--------GRKPGGKKRGEDivshlkvtleqiyngamrkLAINKDVICANCEGHGG-P 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 144 RDR-------NSVG-PSRLKQDPPIIHELKVSLeeiySGCTKRMKI---SRKRLNPDGRSYRSEDKILTIEIKKGWKEGT 212
Cdd:PTZ00037 163 KDAfvdcklcNGQGiRVQIRQMGSMIHQTQSTC----NSCNGQGKIipeSKKCKNCSGKGVKKTRKILEVNIDKGVPNQH 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 213 KITFPREGDETPNSIPADIVFIIKDKEHPKFKRDGSNIVYTAKISLREALCGCSINVPTMDGRNIPMSVT--DIVKPGMR 290
Cdd:PTZ00037 239 KITFHGEADEKPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRKLLVNTPpgEVVKPGDI 318
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*...
gi 149026244 291 RRIIGYGLPFPKNPDQRGDLLIEFDVSFP--DVISAASKEILRKHLPA 336
Cdd:PTZ00037 319 KVINNEGMPTYKSPFKKGNLYVTFEVIFPvdRKFTNEEKEILKSLFPQ 366
DnaJ_C cd10747
C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 ...
158-320 1.61e-52

C-terminal substrate binding domain of DnaJ and HSP40; The C-terminal region of the DnaJ/Hsp40 protein mediates oligomerization and binding to denatured polypeptide substrate. DnaJ/Hsp40 is a widely conserved heat-shock protein. It prevents the aggregation of unfolded substrate and forms a ternary complex with both substrate and DnaK/Hsp70; the N-terminal J-domain of DnaJ/Hsp40 stimulates the ATPase activity of DnaK/Hsp70.


Pssm-ID: 199909 [Multi-domain]  Cd Length: 158  Bit Score: 170.30  E-value: 1.61e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 158 PPIIHELKVSLEEIYSGCTKRMKISRKRLnpdgrsYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPA-DIVFIIK 236
Cdd:cd10747    1 ADLRYDLELTLEEAYFGKEKEIKIPRKVT------RVREKKTLTVKIPAGVDDGQRLRLRGEGDAGPNGGPPgDLYVVIR 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 237 DKEHPKFKRDGSNIVYTAKISLREALCGCSINVPTmDGRNIPMSVTDIVKPGMRRRIIGYGLPFPkNPDQRGDLLIEFDV 316
Cdd:cd10747   75 VKPHPVFRRDGNDLYCEVPISLTEALLGGEIEVPT-LGGKVKLKIPPGTQPGTVLRLKGKGMPRL-RGGGRGDLYVEVKV 152

                 ....
gi 149026244 317 SFPD 320
Cdd:cd10747  153 EFPK 156
PRK10767 PRK10767
chaperone protein DnaJ; Provisional
1-332 5.42e-52

chaperone protein DnaJ; Provisional


Pssm-ID: 236757 [Multi-domain]  Cd Length: 371  Bit Score: 175.72  E-value: 5.42e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   1 MGKDYYHILGIEKGATDEDIKKAYRKQALKFHPDKNK-SPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKggaggt 79
Cdd:PRK10767   2 AKRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPgDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFE------ 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  80 dgqggtfrytfHGDPHATFAAFFGGANPFEIFFGRRMGGGRdseemeidgdpfsafgfsmnGYPRDRNSVGpSRLKQDpp 159
Cdd:PRK10767  76 -----------QGGGGGGFGGGGGFGDIFGDIFGDIFGGGR--------------------GGGRQRARRG-ADLRYN-- 121
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 160 iiheLKVSLEEIYSGCTKRMKISRK-----------------------------RL----------------------NP 188
Cdd:PRK10767 122 ----MEITLEEAVRGVTKEIRIPTLvtcdtchgsgakpgtspktcptchgagqvRMqqgfftvqqtcptchgrgkiikDP 197
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 189 ----DGRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPA-DIVFIIKDKEHPKFKRDGSNIVYTAKISLREALC 263
Cdd:PRK10767 198 ckkcHGQGRVEKEKTLSVKIPAGVDTGDRIRLSGEGEAGERGGPAgDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAAL 277
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 149026244 264 GCSINVPTMDGRnIPMSVTDIVKPGMRRRIIGYGLPfPKNPDQRGDLLIEFDVSFPDVISAASKEILRK 332
Cdd:PRK10767 278 GGEIEVPTLDGR-VKLKIPEGTQTGKLFRLRGKGVK-SVRSGARGDLYCQVVVETPVNLTKRQKELLEE 344
PRK14291 PRK14291
chaperone protein DnaJ; Provisional
1-321 3.83e-50

chaperone protein DnaJ; Provisional


Pssm-ID: 237661 [Multi-domain]  Cd Length: 382  Bit Score: 171.49  E-value: 3.83e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   1 MGKDYYHILGIEKGATDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKggaggtd 80
Cdd:PRK14291   1 AKKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFS------- 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  81 gqggtfrytfhgdphATFAAFFGGANpfeifFGRRMGGGRDseemEIDGDPFSAFGFSmNGYPRDRNSVGPSRLKQDPP- 159
Cdd:PRK14291  74 ---------------GSGQQQQGQEG-----FSDFGGGNIE----DILEDVFDIFGFG-DIFGRRRATRERRKTYQRPVk 128
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 160 ---IIHELKVSLEEIYSGCTKRMKISR-----------------KRLNP------------------------------- 188
Cdd:PRK14291 129 gedIYQTVEISLEEAYTGTTVSLEVPRyvpceacggtgydpgsgEKVCPtcggsgeiyqrggffrisqtcptcggegvlr 208
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 189 ------DGRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPN-SIPADIVFIIKDKEHPKFKRDGSNIVYTAKISLREA 261
Cdd:PRK14291 209 epcskcNGRGLVIKKETIKVRIPPGVDNGSKLRVPGKGHAGRFgGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEA 288
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 262 LCGCSINVPTMDGRNIPMSVTDIVKPGMRRRIIGYGLPFPKNpDQRGDLLIEFDVSFPDV 321
Cdd:PRK14291 289 VLGTELEVPLLDGKKEKVKIPPGTKEGDKIRVPGKGMPRLKG-SGYGDLVVRVHIDVPKI 347
PRK14286 PRK14286
chaperone protein DnaJ; Provisional
3-332 4.28e-50

chaperone protein DnaJ; Provisional


Pssm-ID: 172774 [Multi-domain]  Cd Length: 372  Bit Score: 170.94  E-value: 4.28e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   3 KDYYHILGIEKGATDEDIKKAYRKQALKFHPDKNK-SPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKGGAGGTDG 81
Cdd:PRK14286   4 RSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKgNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAGGFGQ 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  82 QGGTFRYTFHGDPHATFAAFFGGANPFEIFFGRRMGGGRDSE---EMEIDGDPfSAFGFSMN-GYPR-----DRNSVGPS 152
Cdd:PRK14286  84 GAYTDFSDIFGDFGDIFGDFFGGGRGGGSGGGRRSGPQRGSDlryNLEVSLED-AALGREYKiEIPRlescvDCNGSGAS 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 153 RlKQDPPIIHELKVS-----LEEIYSGCT-------KRMKISRKRLNPDGRSYRSEDKILTIEIKKGWKEGTKITFPREG 220
Cdd:PRK14286 163 K-GSSPTTCPDCGGSgqirrTQGFFSVATtcptcrgKGTVISNPCKTCGGQGLQEKRRTINIKIPPGVETGSRLKVSGEG 241
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 221 DETPNSIP-ADIVFIIKDKEHPKFKRDGSNIVYTAKISLREALCGCSINVPTMDGRNIPMSVTDIVKPGMRRRIIGYGLP 299
Cdd:PRK14286 242 EAGPNGGPhGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDGKKAKMKIPEGTESGQVFRLKGHGMP 321
                        330       340       350
                 ....*....|....*....|....*....|...
gi 149026244 300 FpKNPDQRGDLLIEFDVSFPDVISAASKEILRK 332
Cdd:PRK14286 322 Y-LGAYGKGDQHVIVKIEIPKKITRRQRELIEE 353
PRK14289 PRK14289
molecular chaperone DnaJ;
3-332 1.82e-49

molecular chaperone DnaJ;


Pssm-ID: 237660 [Multi-domain]  Cd Length: 386  Bit Score: 169.63  E-value: 1.82e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   3 KDYYHILGIEKGATDEDIKKAYRKQALKFHPDKNK-SPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKGgaggtdg 81
Cdd:PRK14289   5 RDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPgDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGG------- 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  82 qggtfrytfhgdphATFAAFFGGA-----NPFEIF---FGRRMGGgrdseemeidgdpFSAF-GFSMNGYPRDRNSVGPS 152
Cdd:PRK14289  78 --------------AAGGGGFSGEgmsmeDIFSMFgdiFGGHGGG-------------FGGFgGFGGGGSQQRVFRGSDL 130
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 153 RLKqdppiiheLKVSLEEIYSGCTKRMKISR------------------------------------------------- 183
Cdd:PRK14289 131 RVK--------VKLNLKEISTGVEKKFKVKKyvpcshchgtgaegnngsetcptckgsgsvtrvqntilgtmqtqstcpt 202
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 184 ------------KRLNPDGRSYrsEDKILTIEIKKGWKEGTKITFPREGDETP-NSIPADIVFIIKDKEHPKFKRDGSNI 250
Cdd:PRK14289 203 cngegkiikkkcKKCGGEGIVY--GEEVITVKIPAGVAEGMQLSMNGKGNAGKhGGVNGDLLVVIEEEPHPELIRDENDL 280
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 251 VYTAKISLREALCGCSINVPTMDGRnIPMSVTDIVKPGMRRRIIGYGLPfPKNPDQRGDLLIEFDVSFPDVISAASKEIL 330
Cdd:PRK14289 281 IYNLLLSVPTAALGGAVEVPTIDGK-AKVKIEAGTQPGKVLRLRNKGLP-SVNGYGTGDLLVNVSVYIPETLSKEEKQTL 358

                 ..
gi 149026244 331 RK 332
Cdd:PRK14289 359 EK 360
PRK14293 PRK14293
molecular chaperone DnaJ;
1-332 5.40e-49

molecular chaperone DnaJ;


Pssm-ID: 237663 [Multi-domain]  Cd Length: 374  Bit Score: 168.24  E-value: 5.40e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   1 MGKDYYHILGIEKGATDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLkggaggtd 80
Cdd:PRK14293   1 MAADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRARYDQFGEAGV-------- 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  81 gqggtfrytfhgdphatfaaffGGANPFEIFFGrrMGGGRDSEEMEidgdpFSAFGFSMNGYPRDRNSvGPSR---LKQD 157
Cdd:PRK14293  73 ----------------------SGAAGFPDMGD--MGGFADIFETF-----FSGFGGAGGQGGRRRRR-GPQRgddLRYD 122
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 158 ppiiheLKVSLEEIYSGCTKRMKIS--------------------------------RKRLNP----------------- 188
Cdd:PRK14293 123 ------LKLDFREAIFGGEKEIRIPhletcetcrgsgakpgtgpttcstcggagqvrRATRTPfgsftqvsecptcngtg 196
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 189 ----------DGRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPA-DIVFIIKDKEHPKFKRDGSNIVYTAKIS 257
Cdd:PRK14293 197 qviedpcdacGGQGVKQVTKKLKINIPAGVDTGTRLRVSGEGDAGLRGGPPgDLYVYLFVKNDPEFRRDGINILSEIKIS 276
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 149026244 258 LREALCGCSINVPTMDGR---NIPMSvtdiVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFDVSFPDVISAASKEILRK 332
Cdd:PRK14293 277 YLQAILGDTLEVDTVDGPvelTIPAG----TQPNTVLTLENKGVPRLGNPVARGDHLITVKVKIPTRISDEERELLEK 350
PRK14283 PRK14283
chaperone protein DnaJ; Provisional
3-332 2.70e-47

chaperone protein DnaJ; Provisional


Pssm-ID: 184604 [Multi-domain]  Cd Length: 378  Bit Score: 163.84  E-value: 2.70e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   3 KDYYHILGIEKGATDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKGgaggtdgq 82
Cdd:PRK14283   5 RDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDG-------- 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  83 ggtfrytfhgdphatFAA--FFGGANPFEIFFGrrMGGGRdseemeidGDPFSAFGFSmngyprdRNSVGPSRLKQDppI 160
Cdd:PRK14283  77 ---------------FSQedIFNNINFEDIFQG--FGFGI--------GNIFDMFGFG-------GGSRHGPQRGAD--I 122
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 161 IHELKVSLEEIYSGCTKRMKISRKRLNP---------------------------------------------------- 188
Cdd:PRK14283 123 YTEVEITLEEAASGVEKDIKVRHTKKCPvcngsraepgsevktcptcggtgqvkqvrntilgqmmnvttcpdcqgegkiv 202
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 189 -------DGRSYRSEDKILTIEIKKGWKEGTKITFPREGDE-TPNSIPADIVFIIKDKEHPKFKRDGSNIVYTAKISLRE 260
Cdd:PRK14283 203 ekpcsncHGKGVVRETKTISVKIPAGVETGSRLRVSGEGEMgDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQ 282
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 149026244 261 ALCGCSINVPTMDGrNIPMSVTDIVKPGMRRRIIGYGLPfPKNPDQRGDLLIEFDVSFPDVISAASKEILRK 332
Cdd:PRK14283 283 AALGDTVDVPTIDG-PVELKIPAGTQSGTTFRLKGHGMP-SLRWSGKGNLYVKVKVVVPKKLSPKQKELLRE 352
PRK14277 PRK14277
chaperone protein DnaJ; Provisional
1-332 7.07e-47

chaperone protein DnaJ; Provisional


Pssm-ID: 184599 [Multi-domain]  Cd Length: 386  Bit Score: 163.05  E-value: 7.07e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   1 MGKDYYHILGIEKGATDEDIKKAYRKQALKFHPDKNK-SPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLkggaggt 79
Cdd:PRK14277   3 AKKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPgDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAF------- 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  80 dgqggtfrytfhgDPHATFAAFFGGANPFEIFFGRRMGGGrdseemeidGDPFSAFGFSMNGYPRDRNSVGPsrlKQDPP 159
Cdd:PRK14277  76 -------------DPGGFGQGGFGQGGFGGGGFDFDFGGF---------GDIFEDIFGDFFGTGRRRAETGP---QKGAD 130
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 160 IIHELKVSLEEIYSGCTKRMKISR--------------------------------KRLNPDGR--------SYRSEDKI 199
Cdd:PRK14277 131 IRYDLELTFEEAAFGTEKEIEVERfekcdvckgsgakpgskpvtcpvchgtgqvrtRQNTPFGRivnirtcdRCHGEGKI 210
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 200 LT-------------------IEIKKGWKEGTKITFPREGDETPNSIP-ADIVFIIKDKEHPKFKRDGSNIVYTAKISLR 259
Cdd:PRK14277 211 ITdpcnkcggtgrirrrrkikVNIPAGIDDGQMITLRGEGEPGIKGGPnGDLYIVIKVKPHPLFKREGYNVYLEMPITFT 290
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 149026244 260 EALCGCSINVPTMDGRNIpMSVTDIVKPGMRRRIIGYGLPFpKNPDQRGDLLIEFDVSFPDVISAASKEILRK 332
Cdd:PRK14277 291 DAALGGEIEIPTLDGKVK-FTIPEGTQTGTKFRLRGKGIPH-LRGRGRGDQIVKVYIEVPKKLTEKQKELLRE 361
PRK14299 PRK14299
chaperone protein DnaJ; Provisional
3-332 3.83e-46

chaperone protein DnaJ; Provisional


Pssm-ID: 237667 [Multi-domain]  Cd Length: 291  Bit Score: 158.56  E-value: 3.83e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   3 KDYYHILGIEKGATDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKGGAGGTDGQ 82
Cdd:PRK14299   4 KDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPPPG 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  83 GGTFrYTFHGDPHATFAAFFGganpfEIFFGRRMGGGRdseemeidGDPFSAFGFSmngyprdrnsvgpSRLKQDppIIH 162
Cdd:PRK14299  84 PPGG-GDFSGFNVGDFSDFFQ-----QLFGGRGGFGGF--------GDLFGSVGRR-------------ARKGRD--LEA 134
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 163 ELKVSLEEIYSGCTKRMKISRKRlnpdgrsyrsedkiLTIEIKKGWKEGTKITFPREGDETpnsipADIVFIIKDKEHPK 242
Cdd:PRK14299 135 ELPLTLEEAYRGGEKVVEVAGER--------------LSVRIPPGVREGQVIRLAGKGRQG-----GDLYLVVRLLPHPV 195
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 243 FKRDGSNIVYTAKISLREALCGCSINVPTMDGrniPMSVT--DIVKPGMRRRIIGYGlpFPKNPDQRGDLLIEFDVSFPD 320
Cdd:PRK14299 196 FRLEGDDLYATVDVPAPIAVVGGKVRVMTLDG---PVEVTipPRTQAGRKLRLKGKG--WPRGPAGRGDQYAEVRITIPT 270
                        330
                 ....*....|..
gi 149026244 321 VISAASKEILRK 332
Cdd:PRK14299 271 RPTPEEERLYKQ 282
DnaJ_C pfam01556
DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It ...
160-319 5.16e-46

DnaJ C terminal domain; This family consists of the C terminal region of the DnaJ protein. It is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. The two C-terminal domains CTDI and CTDII, both incorporated in this family are necessary for maintaining the J-domains in their specific relative positions. Structural analysis of PDB:1nlt shows that PF00684 is nested within this DnaJ C-terminal region.


Pssm-ID: 460251 [Multi-domain]  Cd Length: 213  Bit Score: 155.49  E-value: 5.16e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  160 IIHELKVSLEEIYSGCTKRMKISRKRLNPD-------------------------------------------------- 189
Cdd:pfam01556   1 LEYELELTLEEAYFGCTKKIKITRNVICDTcggsgakpgtspktcpccggggqvrrqfgffstctccpccggggkiidkc 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  190 ----GRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPNS-IPADIVFIIKDKEHPKFKRDGSNIVYTAKISLREALCG 264
Cdd:pfam01556  81 ckccGGGGVVEKKTLEVKIPAGVDDGQRIRLRGEGDAGENGgPPGDLYVVIRVKPHPVFRRDGDDLYCTVPISLTEALLG 160
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 149026244  265 CSINVPTMDGRnIPMSVTDIVKPGMRRRIIGYGLPFPKnPDQRGDLLIEFDVSFP 319
Cdd:pfam01556 161 GTIEVPTLDGK-VKLKIPAGTQPGTVLRLKGKGMPRLK-GGGRGDLYVTVKVEVP 213
PRK14281 PRK14281
chaperone protein DnaJ; Provisional
1-331 1.79e-45

chaperone protein DnaJ; Provisional


Pssm-ID: 237657 [Multi-domain]  Cd Length: 397  Bit Score: 159.59  E-value: 1.79e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   1 MGKDYYHILGIEKGATDEDIKKAYRKQALKFHPDKN-KSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKGGAGGT 79
Cdd:PRK14281   1 MKRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNpDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  80 DGQGGTFRYTFHGDPHATFAAFFGGanpfeiffGRRMGGGRDSeemeidgdPFS-AFGfsmNGYPRDRNSVGPSrlKQDP 158
Cdd:PRK14281  81 GGPGYGGGGGDFNDIFSAFNDMFGG--------GARRGGGSPF--------GFEdVFG---GGGRRRRASAGIP--GTDL 139
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 159 PIihELKVSLEEIYSGCTKRMKISRK----------------------------------------------------RL 186
Cdd:PRK14281 140 KI--RLKLTLEEIAKGVEKTLKIKKQvpckecngtgsktgatetcptchgsgevrqasktmfgqfvnitacptcggegRV 217
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 187 NPD------GRSYRSEDKILTIEIKKGWKEGTKITFPREGDETP-NSIPADIVFIIKDKEHPKFKRDGSNIVYTAKISLR 259
Cdd:PRK14281 218 VKDrcpacyGEGIKQGEVTVKVTVPAGVQDGNYLTLRGQGNAGPrGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYP 297
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 149026244 260 EALCGCSINVPTMDGRnIPMSVTDIVKPGMRRRIIGYGLPFPKNPDqRGDLLIEFDVSFPDVISAASKEILR 331
Cdd:PRK14281 298 DLVLGTKVEVPTLDGA-VKLTIPAGTQPETMLRIPGKGIGHLRGSG-RGDQYVRVNVFVPKEVSHQDKELLK 367
PRK14298 PRK14298
chaperone protein DnaJ; Provisional
3-332 2.14e-45

chaperone protein DnaJ; Provisional


Pssm-ID: 184612 [Multi-domain]  Cd Length: 377  Bit Score: 158.86  E-value: 2.14e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   3 KDYYHILGIEKGATDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKggagGTDGQ 82
Cdd:PRK14298   5 RDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGID----NQYSA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  83 GGTFRYTFHGDPHATFAAFFGGANPfeiffGRRMGGGRDSE---EMEIDGDPfSAFGFSMN-GYPRDRN----------- 147
Cdd:PRK14298  81 EDIFRGADFGGFGDIFEMFFGGGGR-----RGRMGPRRGSDlryDLYITLEE-AAFGVRKDiDVPRAERcstcsgtgakp 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 148 -----------SVGPSRLKQDPPIIHELKVSleeIYSGCTKRMKISRK---RLNPDGRSYRSedKILTIEIKKGWKEGTK 213
Cdd:PRK14298 155 gtspkrcptcgGTGQVTTTRSTPLGQFVTTT---TCSTCHGRGQVIESpcpVCSGTGKVRKT--RKITVNVPAGADSGLR 229
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 214 ITFPREGDE-TPNSIPADIVFIIKDKEHPKFKRDGSNIVYTAKISLREALCGCSINVPTMDGrNIPMSvtdiVKPGMRR- 291
Cdd:PRK14298 230 LKLSGEGEAgSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYG-KVKMN----IPPGTQTh 304
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....
gi 149026244 292 ---RIIGYGLPFpKNPDQRGDLLIEFDVSFPDVISAASKEILRK 332
Cdd:PRK14298 305 svfRLKDKGMPR-LHGHGKGDQLVKVIVKTPTKLTQEQKELLRE 347
PRK14297 PRK14297
molecular chaperone DnaJ;
3-337 6.17e-43

molecular chaperone DnaJ;


Pssm-ID: 184611 [Multi-domain]  Cd Length: 380  Bit Score: 152.24  E-value: 6.17e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   3 KDYYHILGIEKGATDEDIKKAYRKQALKFHPDKNK-SPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEeglkggaggtdg 81
Cdd:PRK14297   4 KDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKgNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGT------------ 71
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  82 qggtfrytfhgdphatfAAFFGGANpfeifFGRRMGGGRDSEEMEIDGDPF-SAFGFSMNGYPRDRNsvGPSRlkqDPPI 160
Cdd:PRK14297  72 -----------------ADFNGAGG-----FGSGGFGGFDFSDMGGFGDIFdSFFGGGFGSSSRRRN--GPQR---GADI 124
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 161 IHELKVSLEEIYSGCTKRMKISR--------------------------------KRLNPDGR----------------- 191
Cdd:PRK14297 125 EYTINLTFEEAVFGVEKEISVTRnencetcngtgakpgtspktcdkcggtgqirvQRNTPLGSfvstttcdkcggsgkvi 204
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 192 -----------SYRSEDKIlTIEIKKGWKEGTKITFPREGDETPNSIPADIVFI-IKDKEHPKFKRDGSNIVYTAKISLR 259
Cdd:PRK14297 205 edpcnkchgkgKVRKNRKI-KVNVPAGVDTGNVIPLRGQGEHGKNGGPTGDLYInIRVAPHKTFKRKGFDIYIDKHISFA 283
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 149026244 260 EALCGCSINVPTMDGrNIPMSVTDIVKPGMRRRIIGYGLPFpKNPDQRGDLLIEFDVSFPDVISAASKEILRKHLPAS 337
Cdd:PRK14297 284 KAALGTEIKVPTVDG-EVKYEVPAGTQPGTVFRLKGKGVPR-VNSTGRGNQYVTVIVDIPKKLNSKQKEALTMFMEAS 359
PRK14301 PRK14301
chaperone protein DnaJ; Provisional
1-332 8.23e-43

chaperone protein DnaJ; Provisional


Pssm-ID: 237668 [Multi-domain]  Cd Length: 373  Bit Score: 151.82  E-value: 8.23e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   1 MGKDYYHILGIEKGATDEDIKKAYRKQALKFHPDKN-KSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKGGAGgt 79
Cdd:PRK14301   2 SQRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNpDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNGG-- 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  80 dgqggtfrytFHG--DPHATFAAFfggANPFEIFFGRRMGGGRDSEEMEIDGD-------PF------------------ 132
Cdd:PRK14301  80 ----------FGGfsSAEDIFSHF---SDIFGDLFGFSGGGSRRGPRPQAGSDlrynltvSFrqaakgdevtlripknvt 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 133 --------SAFGFS------MNGYPRDRNSVGPSRLKQDPPIIH-ELKVsleeIYSGCTKrmkisrkrlnPDGRSYRSED 197
Cdd:PRK14301 147 cddcggsgAAPGTSpetcrhCGGSGQVRQSQGFFQIAVPCPVCRgEGRV----ITHPCPK----------CKGSGIVQQT 212
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 198 KILTIEIKKGWKEGTKITFPREGDETPNSIPA-DIVFIIKDKEHPKFKRDGSNIVYTAKISLREALCGCSINVPTMDGrN 276
Cdd:PRK14301 213 RELKVRIPAGVDTGSRLRLRGEGEPGVHGGPPgDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDD-P 291
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 149026244 277 IPMSVTDIVKPGMRRRIIGYGLPFPKNpDQRGDLLIEFDVSFPDVISAASKEILRK 332
Cdd:PRK14301 292 VTLDIPKGTQSGEVFRLRGKGLPYLGS-SQKGDLLVEVSVVTPTKLTKRQEELLRE 346
PRK14292 PRK14292
chaperone protein DnaJ; Provisional
4-330 3.19e-41

chaperone protein DnaJ; Provisional


Pssm-ID: 237662 [Multi-domain]  Cd Length: 371  Bit Score: 147.73  E-value: 3.19e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   4 DYYHILGIEKGATDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKGGAGGTDGQG 83
Cdd:PRK14292   3 DYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGMPGGDPFGG 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  84 GTFrytfhgDPHATFAAFFGGANPFEIFFGRRMGGGRDSE----------------EMEID-----------------GD 130
Cdd:PRK14292  83 MGF------DPMDIFEQLFGGAGFGGGRGRRGPARGDDLEtearitleqarageevEVEVDrltecehchgsrtepggKP 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 131 PFSAFGFSMNGYPR--DRNSVGPSRLKQDPPIIHELKVSLEEIYSGCTKRmkisrkrlnpdGRSYRSEDkiLTIEIKKGW 208
Cdd:PRK14292 157 PKTCPTCRGAGAVRaqARTIFGVVETQQPCPTCRGEGQIITDPCTVCRGR-----------GRTLKAET--VKVKLPRGI 223
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 209 KEGTKITFPREGDETPNSiPADIVFIIKDKEHPKFKRDGSNIVYTAKISLREALCGCSINVPTMDGRNIpMSVTDIVKPG 288
Cdd:PRK14292 224 DEGYRIRVAGMGNEGPGG-NGDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDGPQV-IEVKPGTQHG 301
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|..
gi 149026244 289 MRRRIIGYGLPFPKNPDQrGDLLIEFDVSFPDVISAASKEIL 330
Cdd:PRK14292 302 DLHRLRGQGMPRLQGAGT-GDLIVEYEIAVPKQLSPEAREAL 342
PRK14295 PRK14295
molecular chaperone DnaJ;
3-337 6.20e-41

molecular chaperone DnaJ;


Pssm-ID: 237665 [Multi-domain]  Cd Length: 389  Bit Score: 147.30  E-value: 6.20e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   3 KDYYHILGIEKGATDEDIKKAYRKQALKFHPDKNK-SPQAEEKFKEVAEAYEVLSDPKKREIYDQ----FGEEGlkggag 77
Cdd:PRK14295   9 KDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKgDAKAEERFKEISEAYDVLSDEKKRKEYDEarslFGNGG------ 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  78 gtdgqggtFRYTFHGDPhatfaaffGGANPFEI--FFGRRMGGGRDSEEMEIDGDpfsAFGFSMNGyprdRNSVGPSRLK 155
Cdd:PRK14295  83 --------FRPGPGGGG--------GGGFNFDLgdLFGGGAQGGGGAGGGGGLGD---VFGGLFNR----GGRRTQPRRG 139
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 156 QDppIIHELKVSLEEIYSGCTKRMKISRK-----------------RLNPD------------------------GRSYR 194
Cdd:PRK14295 140 AD--VESEVTLSFTEAIDGATVPLRLTSQapcpacsgtgakngttpRVCPTcsgtgqvsrnsggfslsepcpdckGRGLI 217
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 195 SEDKILT--------------IEIKKGWKEGTKITFPREGDETPNSIPA-DIVFIIKDKEHPKFKRDGSNIVYTAKISLR 259
Cdd:PRK14295 218 ADDPCLVckgsgrakssrtmqVRIPAGVSDGQRIRLRGKGAPGERGGPAgDLYVVVHVDPHPVFGRSGDNLTVTVPVTFP 297
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 260 EALCGCSINVPTMDGrnipMSVTDIVKPGMRR----RIIGYGLpfPKNPDQRGDLLIEFDVSFPDVISAASKEILRKHLP 335
Cdd:PRK14295 298 EAALGAEVRVPTLGG----PPVTVKLPPGTPNgrvlRVRGKGA--VRKDGTRGDLLVTVEVAVPKDLSGKAREALEAFRE 371

                 ..
gi 149026244 336 AS 337
Cdd:PRK14295 372 AT 373
PRK14294 PRK14294
chaperone protein DnaJ; Provisional
3-330 1.37e-40

chaperone protein DnaJ; Provisional


Pssm-ID: 237664 [Multi-domain]  Cd Length: 366  Bit Score: 145.68  E-value: 1.37e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   3 KDYYHILGIEKGATDEDIKKAYRKQALKFHPDKNK-SPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKGGAGGTDG 81
Cdd:PRK14294   4 RDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPgDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTGFSGFS 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  82 QGGTFRYTFhGDPHATFAAFFGGANpfeiffGRRMGGGRDSEEMEIDGD-PFSAFGFSMNGYPRDRNSV-----GPSRLK 155
Cdd:PRK14294  84 GFDDIFSSF-GDIFEDFFGFGGGRR------GRSRTAVRAGADLRYDLTlPFLEAAFGTEKEIRIQKLEtceecHGSGCE 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 156 Q--DPPIIHELKVSLE--------EIYSGCTK-----RMKISR-KRLNPDGRSYRSedKILTIEIKKGWKEGTKITFPRE 219
Cdd:PRK14294 157 PgtSPTTCPQCGGSGQvtqsqgffSIRTTCPRcrgmgKVIVSPcKTCHGQGRVRVS--KTVQVKIPAGVDTGSRLRLRGE 234
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 220 GDETPNSIPA-DIVFIIKDKEHPKFKRDGSNIVYTAKISLREALCGCSINVPTMDGRNiPMSVTDIVKPGMRRRIIGYGL 298
Cdd:PRK14294 235 GEAGVRGGPPgDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGER-ELKIPKGTQPGDIFRFKGKGI 313
                        330       340       350
                 ....*....|....*....|....*....|..
gi 149026244 299 PFPKNpDQRGDLLIEFDVSFPDVISAASKEIL 330
Cdd:PRK14294 314 PSLRG-GGRGDQIIEVEVKVPTRLTKKQEELL 344
PRK14280 PRK14280
molecular chaperone DnaJ;
1-332 2.13e-39

molecular chaperone DnaJ;


Pssm-ID: 237656 [Multi-domain]  Cd Length: 376  Bit Score: 142.94  E-value: 2.13e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   1 MGK-DYYHILGIEKGATDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGeeglkggaggt 79
Cdd:PRK14280   1 MAKrDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQYDQFG----------- 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  80 dgqggtfrytfHGDPHATFAAFFGGANPFEIFFGRrmgggrdseemeidGDPFSAFgFSMNGYPRDrnsvgPSRLKQDPP 159
Cdd:PRK14280  70 -----------HAGPNQGFGGGGFGGGDFGGGFGF--------------EDIFSSF-FGGGGRRRD-----PNAPRQGAD 118
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 160 IIHELKVSLEEIYSGCTKRMKISRK---------------------------RLN------------------------- 187
Cdd:PRK14280 119 LQYTMTLTFEEAVFGKEKEIEIPKEetcdtchgsgakpgtsketcshcggsgQVSveqntpfgrvvnrqtcphcngtgqe 198
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 188 -----PDGRSYRSEDKILTIEIK--KGWKEGTKITFPREGDETPNSIPA-DIVFIIKDKEHPKFKRDGSNIVYTAKISLR 259
Cdd:PRK14280 199 ikekcPTCHGKGKVRKRKKINVKipAGVDNGQQIRVSGEGEPGVNGGPAgDLYVVFRVRPHEFFERDGDDIYCEMPLTFA 278
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 149026244 260 EALCGCSINVPTMDGrNIPMSVTDIVKPGMRRRIIGYGLPFPKNPDQrGDLLIEFDVSFPDVISAASKEILRK 332
Cdd:PRK14280 279 QAALGDEIEVPTLHG-KVKLKIPAGTQTGTQFRLKGKGVPNVRGYGQ-GDQYVVVRVVTPTKLTDRQKELLRE 349
PRK14278 PRK14278
chaperone protein DnaJ; Provisional
1-332 4.68e-39

chaperone protein DnaJ; Provisional


Pssm-ID: 237654 [Multi-domain]  Cd Length: 378  Bit Score: 142.11  E-value: 4.68e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   1 MGKDYYHILGIEKGATDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREIYDqfgeeglkggaggtd 80
Cdd:PRK14278   1 MARDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRRIVD--------------- 65
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  81 gqggtfrytFHGDPHATFAAFFGGanpfeifFGRRMGGGrdseemeidGDPFSAFgFSMNGYPRdrnsvGP-SRLKQDPP 159
Cdd:PRK14278  66 ---------LGGDPLESAGGGGGG-------FGGGFGGL---------GDVFEAF-FGGGAASR-----GPrGRVRPGSD 114
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 160 IIHELKVSLEEIYSGCTKRMKI-----------------------------------SRKRL------------------ 186
Cdd:PRK14278 115 SLLRMRLDLEECATGVTKQVTVdtavlcdrchgkgtagdskpvtcdtcggrgevqtvQRSFLgqvmtsrpcptcrgvgev 194
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 187 --NP------DGRsYRSEDKIlTIEIKKGWKEGTKITFPREGDETPNSIPADIVFI-IKDKEHPKFKRDGSNIVYTAKIS 257
Cdd:PRK14278 195 ipDPchecagDGR-VRARREI-TVKIPAGVGDGMRIRLAAQGEVGPGGGPAGDLYVeVHEQPHDVFVRDGDDLHCTVSVP 272
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 149026244 258 LREALCGCSINVPTMDGRNIPMSVTDIVKPGMRRRIIGYGLPFPKNpDQRGDLLIEFDVSFPDVISAASKEILRK 332
Cdd:PRK14278 273 MVDAALGTTVTVEAILDGPSEITIPPGTQPGSVITLRGRGMPHLRS-GGRGDLHAHVEVVVPTRLDHEDIELLRE 346
PRK14282 PRK14282
chaperone protein DnaJ; Provisional
3-331 1.01e-37

chaperone protein DnaJ; Provisional


Pssm-ID: 184603 [Multi-domain]  Cd Length: 369  Bit Score: 138.39  E-value: 1.01e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   3 KDYYHILGIEKGATDEDIKKAYRKQALKFHPDKN--KSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKGGAGGTD 80
Cdd:PRK14282   4 KDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHpeNRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQETE 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  81 GQGGTFRYTFHgdphaTFAAFFGGaNPFEIFFGRRMGGGRDSE----------EMEIDgdpfsaFGFSMNG------YPR 144
Cdd:PRK14282  84 SGGGFFEDIFK-----DFENIFNR-DIFDIFFGERRTQEEQREyarrgediryEIEVT------LSDLINGaeipveYDR 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 145 -------DRNSVGPSRLKQDPPIIHELKVSLEEIYS------------GCTKRMKISRKRLNPDGRSYRSEDKI-LTIEI 204
Cdd:PRK14282 152 yetcphcGGTGVEPGSGYVTCPKCHGTGRIREERRSffgvfvsertceRCGGTGKIPGEYCHECGGSGRIRRRVrTTVKI 231
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 205 KKGWKEGTKITFPREGDETPNSIP-ADIVFIIKDKEHPKFKRDGSNIVYTAKISLREALCGCSINVPTMDGRNIPMSVTD 283
Cdd:PRK14282 232 PAGVEDGTVLRITGGGNAGYYGGPyGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVPLPEGGTTMLKIPP 311
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*...
gi 149026244 284 IVKPGMRRRIIGYGLPFPKNpDQRGDLLIEFDVSFPDVISAASKEILR 331
Cdd:PRK14282 312 GTQPETVFRLKGKGLPNMRY-GRRGDLIVNVHVEIPKRLSREERKLLK 358
PRK14276 PRK14276
chaperone protein DnaJ; Provisional
3-337 1.60e-37

chaperone protein DnaJ; Provisional


Pssm-ID: 237653 [Multi-domain]  Cd Length: 380  Bit Score: 137.91  E-value: 1.60e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   3 KDYYHILGIEKGATDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKggaggtdgq 82
Cdd:PRK14276   4 TEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGAN--------- 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  83 ggtfrytfhgdphatfAAFFGGANPFEIFFGRRMGGGRDseemeidgDPFSAFgFSMNGYPRDrnsvgPSRLKQDPPIIH 162
Cdd:PRK14276  75 ----------------GGFGGGAGGFGGFDGSGGFGGFE--------DIFSSF-FGGGGARRN-----PNAPRQGDDLQY 124
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 163 ELKVSLEEIYSGCTKRMKISRK--------------------------------RLNPDGRSYRS--------------- 195
Cdd:PRK14276 125 RVNLDFEEAIFGKEKEVSYNREatchtcngsgakpgtspvtcgkchgsgvitvdTQTPLGMMRRQvtcdvchgtgkeike 204
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 196 ----------EDKILTIEIK--KGWKEGTKITFPREGDETPNSIP-ADIVFIIKDKEHPKFKRDGSNIVYTAKISLREAL 262
Cdd:PRK14276 205 pcqtchgtghEKQAHTVSVKipAGVETGQQIRLQGQGEAGFNGGPyGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAA 284
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 149026244 263 CGCSINVPTMDGrNIPMSVTDIVKPGMRRRIIGYGLPFPKNPDQrGDLLIEFDVSFPDVISAASKEILRKHLPAS 337
Cdd:PRK14276 285 LGDTVEVPTVHG-DVELKIPAGTQTGKKFRLRGKGAPKLRGGGN-GDQHVTVNIVTPTKLNDAQKEALKAFAKAS 357
PRK14279 PRK14279
molecular chaperone DnaJ;
3-336 3.61e-36

molecular chaperone DnaJ;


Pssm-ID: 237655 [Multi-domain]  Cd Length: 392  Bit Score: 134.47  E-value: 3.61e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   3 KDYYHILGIEKGATDEDIKKAYRKQALKFHPDKNK-SPQAEEKFKEVAEAYEVLSDPKKREIYDQ----FGEEGLKGGAG 77
Cdd:PRK14279   9 KDFYKELGVSSDASAEEIKKAYRKLARELHPDANPgDPAAEERFKAVSEAHDVLSDPAKRKEYDEtrrlFAGGGFGGRRF 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  78 GTDGQGGTFRYTfHGDPHATFAAFFGGANP---------FEIFFGRRMGGGRDSE-------EMEIDGDpF--SAFGFSM 139
Cdd:PRK14279  89 DGGGGFGGFGTG-GDGAEFNLNDLFDAAGRgggggigdlFGGLFNRGGGSARPSRprrgndlETETTLD-FveAAKGVTM 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 140 ngyprdrnsvgPSRLKQDPPII--H--------ELKVSLEEIYSGCTKRMK------------------ISRKRLNPDGR 191
Cdd:PRK14279 167 -----------PLRLTSPAPCTtcHgsgarpgtSPKVCPTCNGSGVISRNQgafgfsepctdcrgtgsiIEDPCEECKGT 235
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 192 SYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPA-DIVFIIKDKEHPKFKRDGSNIVYTAKISLREALCGCSINVP 270
Cdd:PRK14279 236 GVTTRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSgDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGSTLSVP 315
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 149026244 271 TMDGR---NIPMSVTDivkpGMRRRIIGYGLpfPKNPDQRGDLLIEFDVSFPDVISAASKEILRKHLPA 336
Cdd:PRK14279 316 TLDGPvgvKVPAGTAD----GRILRVRGRGV--PKRSGGAGDLLVTVKVAVPPNLDGAAAEALEAYAEA 378
DnaJ COG0484
DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational ...
4-72 5.13e-35

DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440252 [Multi-domain]  Cd Length: 139  Bit Score: 124.43  E-value: 5.13e-35
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   4 DYYHILGIEKGATDEDIKKAYRKQALKFHPDKNKS-PQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGL 72
Cdd:COG0484    1 DYYEILGVSRDASAEEIKKAYRKLAKKYHPDRNPGdPEAEEKFKEINEAYEVLSDPEKRAAYDRFGHAAE 70
DnaJ pfam00226
DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is ...
4-65 5.21e-35

DnaJ domain; DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature.


Pssm-ID: 395170 [Multi-domain]  Cd Length: 63  Bit Score: 121.81  E-value: 5.21e-35
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 149026244    4 DYYHILGIEKGATDEDIKKAYRKQALKFHPDKN-KSPQAEEKFKEVAEAYEVLSDPKKREIYD 65
Cdd:pfam00226   1 DYYEILGVSPDASDEEIKKAYRKLALKYHPDKNpGDPEAEEKFKEINEAYEVLSDPEKRAIYD 63
PRK14284 PRK14284
chaperone protein DnaJ; Provisional
4-332 5.57e-35

chaperone protein DnaJ; Provisional


Pssm-ID: 237658 [Multi-domain]  Cd Length: 391  Bit Score: 131.50  E-value: 5.57e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   4 DYYHILGIEKGATDEDIKKAYRKQALKFHPDKNK-SPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKGGA------ 76
Cdd:PRK14284   2 DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPgDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAggfgga 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  77 --GGTDGQGGTFRYTFHGDphatfaaFFGGANPFEIFFGrrmGGGRdseemeidgdpfsafGFSMNGYPRDRNSVGPSRL 154
Cdd:PRK14284  82 gmGNMEDALRTFMGAFGGE-------FGGGGSFFEGLFG---GLGE---------------AFGMRGGPAGARQGASKKV 136
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 155 kqdppiihELKVSLEEIYSGCTKRMKIS----------RKRLNPDG----------------RSYRS----------EDK 198
Cdd:PRK14284 137 --------HITLSFEEAAKGVEKELLVSgykscdacsgSGANSSQGikvcdrckgsgqvvqsRGFFSmastcpecggEGR 208
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 199 ILT-------------------IEIKKGWKEGTKITFPREGDETPNSIPA-DIVFIIKDKEHPKFKRDGSNIVYTAKISL 258
Cdd:PRK14284 209 VITdpcsvcrgqgrikdkrsvhVHIPAGVDSGMRLKMEGYGDAGQNGAPAgDLYVFIDVEPHPVFERRGDDLILELPIGF 288
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 149026244 259 REALCGCSINVPTM-DGRNIPMSVTDIVKPGMRRRIIGYGLPfPKNPDQRGDLLIEFDVSFPDVISAASKEILRK 332
Cdd:PRK14284 289 VDAALGMKKEIPTLlKEGTCRLTIPEGIQSGTILKVRGQGFP-NVHGKGRGDLLVRISVETPQNLSEEQKELLRQ 362
PRK14290 PRK14290
chaperone protein DnaJ; Provisional
1-332 8.04e-34

chaperone protein DnaJ; Provisional


Pssm-ID: 172778 [Multi-domain]  Cd Length: 365  Bit Score: 127.74  E-value: 8.04e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   1 MGKDYYHILGIEKGATDEDIKKAYRKQALKFHPDKN--KSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKGGAGG 78
Cdd:PRK14290   1 MAKDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHpgNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGGSN 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  79 TDGQGgtfrYTFHGDPHATFAAFFGGaNPFEIFFGrrmGGGRDSEEMEIDGDPFSAFGFSM---------------NGYP 143
Cdd:PRK14290  81 FNWDN----FTHFSDINDIFNQIFGG-NFGSDFFS---GFGNQQSTRNIDLDIYTNLDISLedayygtekrikyrrNAMC 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 144 RDRNSVGPSRLKQ-DPPIIHelKVSLEEIYSG--------------CTKRMKISRK---RLNPDGRSYRSEDkiLTIEIK 205
Cdd:PRK14290 153 PDCSGTGAKNGKLiTCPTCH--GTGQQRIVRGqgffrmvtvttcrtCGGRGRIPEEkcpRCNGTGTVVVNED--ISVKIP 228
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 206 KGWKEGTKITFPREGdETPNSIPADIVFIIKDKEHPKFKRDGSNIVYTAKISLREALCGCSINVPTMDgRNIPMSVTDIV 285
Cdd:PRK14290 229 KGATDNLRLRVKGKG-QSYGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFR-EKYNLKIPEGT 306
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*..
gi 149026244 286 KPGMRRRIIGYGLPFpKNPDQRGDLLIEFDVSFPDVISAASKEILRK 332
Cdd:PRK14290 307 QPGEVLKIKGAGMPH-LNGHGSGDLLVRINVEVPKRLTSKQKELIRE 352
PRK14287 PRK14287
chaperone protein DnaJ; Provisional
3-332 3.03e-33

chaperone protein DnaJ; Provisional


Pssm-ID: 237659 [Multi-domain]  Cd Length: 371  Bit Score: 126.28  E-value: 3.03e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   3 KDYYHILGIEKGATDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGeeglkggaggtdgq 82
Cdd:PRK14287   4 RDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFG-------------- 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  83 ggtfrytfHGDPHATF----AAFFGG-ANPFEIFFGRrmGGGRDSEEMEIDGDPF----------SAFGFSMN-GYPRDR 146
Cdd:PRK14287  70 --------HTDPNQGFggggAGDFGGfSDIFDMFFGG--GGGRRNPNAPRQGADLqytmtlefkeAVFGKETEiEIPREE 139
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 147 N----------------------SVGPSRLKQDPPIIHELKVSLEEIYSGCTKRMKisRKRLNPDGRSYRSEDKILTIEI 204
Cdd:PRK14287 140 TcgtchgsgakpgtkpetcshcgGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKIIK--QKCATCGGKGKVRKRKKINVKV 217
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 205 KKGWKEGTKITFPREGDETPNSIPA-DIVFIIKDKEHPKFKRDGSNIVYTAKISLREALCGCSINVPTMDGRnIPMSVTD 283
Cdd:PRK14287 218 PAGIDHGQQLRVSGQGEAGVNGGPPgDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNGK-VKLKIPA 296
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*....
gi 149026244 284 IVKPGMRRRIIGYGLPFPKNPDQrGDLLIEFDVSFPDVISAASKEILRK 332
Cdd:PRK14287 297 GTQTGTSFRLRGKGVPNVHGRGQ-GDQHVQVRVVTPKNLTEKEKELMRE 344
PRK10266 PRK10266
curved DNA-binding protein;
3-319 1.29e-31

curved DNA-binding protein;


Pssm-ID: 182347 [Multi-domain]  Cd Length: 306  Bit Score: 120.31  E-value: 1.29e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   3 KDYYHILGIEKGATDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEglkggaggtdgq 82
Cdd:PRK10266   4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQH------------ 71
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  83 ggtfrytfHGDPHatfaaffgganpfeifFGRRM--GGGRDSEEMEIDgDPFSAFGFSMNGYPRDRnsvgPSRLKQDPPI 160
Cdd:PRK10266  72 --------RNDPQ----------------FNRQFqhGDGQSFNAEDFD-DIFSSIFGQHARQSRQR----PAARGHDIEI 122
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 161 ihELKVSLEEIYSGCTKRMKISRKRLNPDGRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIP-ADIVFIIKDKE 239
Cdd:PRK10266 123 --EVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPnGDLWLVIHIAP 200
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 240 HPKFKRDGSNIVYTAKISLREALCGCSINVPTMDGRnIPMSVTDIVKPGMRRRIIGYGLPFPKnpdQRGDLLIEFDVSFP 319
Cdd:PRK10266 201 HPLFDIVGQDLEIVVPLAPWEAALGAKVTVPTLKES-ILLTIPPGSQAGQRLRVKGKGLVSKK---QTGDLYAVLKIVMP 276
PRK14296 PRK14296
chaperone protein DnaJ; Provisional
3-332 3.06e-31

chaperone protein DnaJ; Provisional


Pssm-ID: 237666 [Multi-domain]  Cd Length: 372  Bit Score: 120.82  E-value: 3.06e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   3 KDYYHILGIEKGATDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLkggaggtdgq 82
Cdd:PRK14296   4 KDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAF---------- 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  83 ggtfrytfhgDPHATFAAFFGGanpFEIFFGrRMG--GGRDSeemeidGDPFSAFgFSMNGYPRDRNSVGPSRLKQDPPI 160
Cdd:PRK14296  74 ----------DGSSGFSSNFGD---FEDLFS-NMGssGFSSF------TNIFSDF-FGSNKSDYQRSTKGQSVSLDIYLT 132
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 161 IHEL-----KVSLEEIYSGCT----------------------------KRM-------------------KISRKRLNP 188
Cdd:PRK14296 133 FKELlfgvdKIIELDLLTNCSkcfgsgaesnsdihicnnchgtgevlvqKNMgffqfqqsakcnvcngagkIIKNKCKNC 212
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 189 DGRSYRSEDKILTIEIKKGWKEGTKITFPREGDET-PNSIPADIVFIIKDKEHPKFKRDGSN-IVYTAKISLREALCGCS 266
Cdd:PRK14296 213 KGKGKYLERKKIEVNIPKGIRPNQQIKLSQKGHASlNNGVNGDLIIDIYLKESKVFEIINNNdILMTYNISYLDAILGNE 292
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 149026244 267 INVPTMDGrNIPMSVTDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFDVSFPDVISAASKEILRK 332
Cdd:PRK14296 293 IIIKTLDG-DIKYKLPKSINSNELIIINNKGLYKSINKDKRGDLIIKVNIVVPKNLSKKEKELIEQ 357
terminal_TopJ NF037946
terminal organelle assembly protein TopJ;
3-135 3.56e-31

terminal organelle assembly protein TopJ;


Pssm-ID: 468284 [Multi-domain]  Cd Length: 440  Bit Score: 121.85  E-value: 3.56e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   3 KDYYHILGIEKGATDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKGGAGgtdgq 82
Cdd:NF037946   5 RDYYEVLGVDRDADDQEIKKAFRKLAKKYHPDRNKAPDAAEIFAEINEAYEVLSNPEKRANYDKYGHDGVDGEGG----- 79
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 149026244  83 ggtfrytFHGDPHATFAAFFGGANPFEIFFGRRMGGgrdSEEMEIDGDPFSAF 135
Cdd:NF037946  80 -------FGFDAFDVFSSFFETINKSGAFLDDSVDE---SVSADDDLDRLFDD 122
PRK14300 PRK14300
chaperone protein DnaJ; Provisional
1-332 7.49e-30

chaperone protein DnaJ; Provisional


Pssm-ID: 172788 [Multi-domain]  Cd Length: 372  Bit Score: 117.04  E-value: 7.49e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   1 MGKDYYHILGIEKGATDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKGGAGGTD 80
Cdd:PRK14300   1 MSQDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSRGG 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  81 GQGgtfrytfHGDPHATFAAFFGGanpfeiFFGRRMGGGRDSEEM--EIDGDPF---------SAF-------GFSM--- 139
Cdd:PRK14300  81 GGN-------HGGFHPDINDIFGD------FFSDFMGGSRRSRPTssKVRGSDLkynltinleEAFhgiekniSFSSevk 147
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 140 ------NGYPRDR--------NSVGPSRLKQDppiihelKVSLEEIYSGCTKRMKISR---KRLNPDGRSYRSEDkiLTI 202
Cdd:PRK14300 148 cdtchgSGSEKGEtvttcdacSGVGATRMQQG-------FFTIEQACHKCQGNGQIIKnpcKKCHGMGRYHKQRN--LSV 218
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 203 EIKKGWKEGTKITFPREGD---ETPNSipADIVFIIKDKEHPKFKRDGSNIVYTAKISLREALCGCSINVPTMDGRNIPM 279
Cdd:PRK14300 219 NIPAGVENGTRIRHTGEGEagiRGGNS--GDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGKVNL 296
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|...
gi 149026244 280 SVTDIVKPGMRRRIIGYGLPFPKNpDQRGDLLIEFDVSFPDVISAASKEILRK 332
Cdd:PRK14300 297 TIPAGTQNGDQLRLRSKGMSKMRS-TIRGDMLTHIHVEVPKNLSKRQRELLEE 348
DnaJ smart00271
DnaJ molecular chaperone homology domain;
3-60 2.17e-27

DnaJ molecular chaperone homology domain;


Pssm-ID: 197617 [Multi-domain]  Cd Length: 60  Bit Score: 101.93  E-value: 2.17e-27
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244     3 KDYYHILGIEKGATDEDIKKAYRKQALKFHPDKNKS--PQAEEKFKEVAEAYEVLSDPKK 60
Cdd:smart00271   1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGdkEEAEEKFKEINEAYEVLSDPEK 60
PRK14285 PRK14285
chaperone protein DnaJ; Provisional
1-281 6.70e-26

chaperone protein DnaJ; Provisional


Pssm-ID: 172773 [Multi-domain]  Cd Length: 365  Bit Score: 106.23  E-value: 6.70e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   1 MGKDYYHILGIEKGATDEDIKKAYRKQALKFHPDKNK-SPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGlkggaggt 79
Cdd:PRK14285   1 MKRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKgNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTA-------- 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  80 dgqggtfrytFHGDphATFAAFFGGANPFEIFFgrrmgggrdseemEIDGDPFSAFGFSMNGYPRDRNSvgpsrlKQDPP 159
Cdd:PRK14285  73 ----------FEGG--GGFEGFSGGFSGFSDIF-------------EDFGDIFDSFFTGNRGQDKNRKH------EKGQD 121
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 160 IIHELKVSLEEIYSGCTKRMKISRKRL---------------------NPDGRSYR---------------SEDKIL--- 200
Cdd:PRK14285 122 LTYQIEISLEDAYLGYKNNINITRNMLcesclgkksekgtspsicnmcNGSGRVMQgggffrvtttcpkcyGNGKIIsnp 201
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 201 --------------TIEIK--KGWKEGTKITFPREGDETPNSIP-ADIVFIIKDKEHPKFKRDGSNIVYTAKISLREALC 263
Cdd:PRK14285 202 cksckgkgslkkkeTIELKipAGIDDNQQIKMRGKGSVNPDNQQyGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAAL 281
                        330
                 ....*....|....*...
gi 149026244 264 GCSINVPTMDGRNIPMSV 281
Cdd:PRK14285 282 GKEIKIQTIASKKIKIKI 299
SEC63 COG5407
Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular ...
4-62 9.46e-26

Preprotein translocase subunit Sec63 [Intracellular trafficking, secretion, and vesicular transport];


Pssm-ID: 444165 [Multi-domain]  Cd Length: 61  Bit Score: 97.76  E-value: 9.46e-26
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   4 DYYHILGIEKGATDEDIKKAYRKQALKFHPDKNK-SPQAEEKFKEVAEAYEVLSDPKKRE 62
Cdd:COG5407    1 DPYEVLGVAKTASADEIKKAYRKLAKKYHPDRNKgDPKAEERFKEINEAYELLSDAEKRA 60
DnaJ cd06257
DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and ...
4-57 1.70e-25

DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.


Pssm-ID: 99751 [Multi-domain]  Cd Length: 55  Bit Score: 96.85  E-value: 1.70e-25
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 149026244   4 DYYHILGIEKGATDEDIKKAYRKQALKFHPDKNKS-PQAEEKFKEVAEAYEVLSD 57
Cdd:cd06257    1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDdPEAEEKFKEINEAYEVLSD 55
PRK14288 PRK14288
molecular chaperone DnaJ;
1-332 4.78e-24

molecular chaperone DnaJ;


Pssm-ID: 172776 [Multi-domain]  Cd Length: 369  Bit Score: 100.92  E-value: 4.78e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244   1 MGKDYYHILGIEKGATDEDIKKAYRKQALKFHPDKNK-SPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKGGaggt 79
Cdd:PRK14288   1 MELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAgDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQA---- 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244  80 dgqggtfrytfhGDPHATFAAFFGGANPFeiffgrrmgggrdseeMEidgdpfSAFGFSMNGYPRDRNSVGPSRLKQdpp 159
Cdd:PRK14288  77 ------------GASQSDFSDFFEDLGSF----------------FE------DAFGFGARGSKRQKSSIAPDYLQT--- 119
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 160 iiheLKVSLEEIYSGCTKRMKISRKRL--------------------------------------------------NP- 188
Cdd:PRK14288 120 ----IELSFKEAVFGCKKTIKVQYQSVcescdgtgakdkaletckqcngqgqvfmrqgfmsfaqtcgacqgkgkiikTPc 195
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244 189 ---DGRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSIPADIVFIIKDKEHPKFKRDGSNIVYTAKISLREALCGC 265
Cdd:PRK14288 196 qacKGKTYILKDEEIDAIIPEGIDDQNRMVLKNKGNEYEKGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGH 275
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 149026244 266 SINVPTMDGRNIPMSVTDIVKPGMRRRIIGYGLPFPKNpDQRGDLLIEFDVSFPDVISAASKEILRK 332
Cdd:PRK14288 276 TIKVPSLKGDELELKIPRNARDRQTFAFRNEGVKHPES-SYRGSLIVELQVIYPKSLNKEQQELLEK 341
termin_org_DnaJ TIGR03835
terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ ...
3-72 1.21e-23

terminal organelle assembly protein TopJ; This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility. [Cellular processes, Chemotaxis and motility]


Pssm-ID: 274808 [Multi-domain]  Cd Length: 871  Bit Score: 101.81  E-value: 1.21e-23
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149026244    3 KDYYHILGIEKGATDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGL 72
Cdd:TIGR03835   2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKKRANYDKYGHDGV 71
CbpA COG2214
Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];
3-66 1.68e-22

Curved DNA-binding protein CbpA, contains a DnaJ-like domain [Transcription];


Pssm-ID: 441816 [Multi-domain]  Cd Length: 91  Bit Score: 89.78  E-value: 1.68e-22
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 149026244   3 KDYYHILGIEKGATDEDIKKAYRKQALKFHPDKNKSP--QAEEKFKEVAEAYEVLSDPKKREIYDQ 66
Cdd:COG2214    5 KDHYAVLGVPPDASLEEIRQAYRRLAKLLHPDRGGELkaLAEELFQRLNEAYEVLSDPERRAEYDR 70
DjlA COG1076
DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];
4-63 3.40e-14

DnaJ domain-containing protein [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440694 [Multi-domain]  Cd Length: 75  Bit Score: 66.74  E-value: 3.40e-14
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 149026244   4 DYYHILGIEKGATDEDIKKAYRKQALKFHPDK---NKSPQ----AEEKFKEVAEAYEVLSDPKKREI 63
Cdd:COG1076    5 DAFELLGLPPDADDAELKRAYRKLQREHHPDRlaaGLPEEeqrlALQKAAAINEAYETLKDPRGIDL 71
PTZ00341 PTZ00341
Ring-infected erythrocyte surface antigen; Provisional
5-73 1.27e-10

Ring-infected erythrocyte surface antigen; Provisional


Pssm-ID: 173534 [Multi-domain]  Cd Length: 1136  Bit Score: 62.88  E-value: 1.27e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 149026244    5 YYHILGIEKGATDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLK 73
Cdd:PTZ00341  575 FYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIK 643
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
4-65 1.30e-08

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 55.81  E-value: 1.30e-08
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 149026244   4 DYYHILGIEK---GATDEDIKKAYRKQALKFHPDKNKSPQA---EEKFKEVAEAYEVLSDPKKREIYD 65
Cdd:COG5269   44 DLYALLGLSKyrtKAIPPQILKAHKKKVYKYHPDKTAAGGNkgcDEFFKLIQKAREVLGDRKLRLQYD 111
PHA03102 PHA03102
Small T antigen; Reviewed
7-69 4.34e-07

Small T antigen; Reviewed


Pssm-ID: 222986 [Multi-domain]  Cd Length: 153  Bit Score: 48.90  E-value: 4.34e-07
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 149026244   7 HILGIEKGA--TDEDIKKAYRKQALKFHPDKNKSpqaEEKFKEVAEAYEVLSDPKKREIYDQFGE 69
Cdd:PHA03102   9 DLLGLPRSAwgNLPLMRKAYLRKCLEFHPDKGGD---EEKMKELNTLYKKFRESVKSLRDLDGEE 70
djlA PRK09430
co-chaperone DjlA;
3-55 1.97e-06

co-chaperone DjlA;


Pssm-ID: 236512 [Multi-domain]  Cd Length: 267  Bit Score: 48.65  E-value: 1.97e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 149026244   3 KDYYHILGIEKGATDEDIKKAYRKQALKFHPDK--NK--SPQ----AEEKFKEVAEAYEVL 55
Cdd:PRK09430 200 EDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKlvAKglPPEmmemAKEKAQEIQAAYELI 260
PHA02624 PHA02624
large T antigen; Provisional
7-61 6.55e-05

large T antigen; Provisional


Pssm-ID: 222912 [Multi-domain]  Cd Length: 647  Bit Score: 44.59  E-value: 6.55e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 149026244   7 HILGIEKGA--TDEDIKKAYRKQALKFHPDKNKSpqaEEKFKEVAEAYEVLSDPKKR 61
Cdd:PHA02624  15 DLLGLPMAAwgNLPLMRKAYLRKCKEYHPDKGGD---EEKMKRLNSLYKKLQEGVKS 68
hscB PRK01356
co-chaperone HscB; Provisional
4-64 1.55e-04

co-chaperone HscB; Provisional


Pssm-ID: 167217 [Multi-domain]  Cd Length: 166  Bit Score: 41.79  E-value: 1.55e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 149026244   4 DYYHILGIEK--GATDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVA----EAYEVLSDPKKREIY 64
Cdd:PRK01356   3 NYFQLLGLPQeyNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIAselnNAYSTLKDALKRAEY 69
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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