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Conserved domains on  [gi|371569037|emb|CCF05887|]
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putative protein yqfU [Bacillus velezensis CAU B946]

Protein Classification

YitT family protein( domain architecture ID 11441691)

YitT family membrane protein similar to Bacillus subtilis YitT, which might function as a permease

Gene Ontology:  GO:0005886

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
YitT COG1284
Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains [Function ...
7-289 5.27e-91

Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains [Function unknown];


:

Pssm-ID: 440895 [Multi-domain]  Cd Length: 285  Bit Score: 271.57  E-value: 5.27e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 371569037   7 HKRESFLHFIFRVIMILIGAGSAAVSIELFLVPNNFIDGGIIGVSLILDHLFmsnpLLNFALFVVLLNIPFMIFGYKYIG 86
Cdd:COG1284    2 KKKIKLKKKLKDYLLIILGALLYAIGLNFFLIPNNLADGGVTGIAIILSYLF----GLPVGILLLLLNIPLFILGYKFLG 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 371569037  87 KTFLISTVIGIVGLALIESSLHHV-EAITTQPILATVFGGLLLGFGVGLVIRNGGSMDGTEILGILLTKKLPFSVGEFVM 165
Cdd:COG1284   78 KRFGIKTIYGVLLLSLFLDLLPPIiPPLTDDPLLAAIFGGVLLGIGLGLVFRGGGSTGGTDIIAMILNKKTGISIGKILL 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 371569037 166 LINVFIFIWAGFVFGPEQAMYSFMTYYIAMKTIDAVIQGLDETKAVIIVADQYAEISDAILHRLGRGTTKLQGKGGYTDE 245
Cdd:COG1284  158 IIDAIIILLAGFVFGWETALYSLIALFITSKVIDFVIEGFNQKKAVFIISDKPEEIAEAILEELGRGVTILKGEGGYTGE 237
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 371569037 246 SKEVIYAVVTRLEVTKLKSIVFEIDKNAFITIMNTHETRGGKFK 289
Cdd:COG1284  238 EKKVLYTVVSRRELAKLKRIVKEIDPNAFVIVSDVSEVLGEGFK 281
 
Name Accession Description Interval E-value
YitT COG1284
Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains [Function ...
7-289 5.27e-91

Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains [Function unknown];


Pssm-ID: 440895 [Multi-domain]  Cd Length: 285  Bit Score: 271.57  E-value: 5.27e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 371569037   7 HKRESFLHFIFRVIMILIGAGSAAVSIELFLVPNNFIDGGIIGVSLILDHLFmsnpLLNFALFVVLLNIPFMIFGYKYIG 86
Cdd:COG1284    2 KKKIKLKKKLKDYLLIILGALLYAIGLNFFLIPNNLADGGVTGIAIILSYLF----GLPVGILLLLLNIPLFILGYKFLG 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 371569037  87 KTFLISTVIGIVGLALIESSLHHV-EAITTQPILATVFGGLLLGFGVGLVIRNGGSMDGTEILGILLTKKLPFSVGEFVM 165
Cdd:COG1284   78 KRFGIKTIYGVLLLSLFLDLLPPIiPPLTDDPLLAAIFGGVLLGIGLGLVFRGGGSTGGTDIIAMILNKKTGISIGKILL 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 371569037 166 LINVFIFIWAGFVFGPEQAMYSFMTYYIAMKTIDAVIQGLDETKAVIIVADQYAEISDAILHRLGRGTTKLQGKGGYTDE 245
Cdd:COG1284  158 IIDAIIILLAGFVFGWETALYSLIALFITSKVIDFVIEGFNQKKAVFIISDKPEEIAEAILEELGRGVTILKGEGGYTGE 237
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 371569037 246 SKEVIYAVVTRLEVTKLKSIVFEIDKNAFITIMNTHETRGGKFK 289
Cdd:COG1284  238 EKKVLYTVVSRRELAKLKRIVKEIDPNAFVIVSDVSEVLGEGFK 281
YitT_membrane pfam02588
Uncharacterized 5xTM membrane BCR, YitT family COG1284; This is probably a bacterial ABC ...
20-226 3.46e-52

Uncharacterized 5xTM membrane BCR, YitT family COG1284; This is probably a bacterial ABC transporter permease (personal obs:Yeats C).


Pssm-ID: 426854  Cd Length: 206  Bit Score: 169.60  E-value: 3.46e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 371569037   20 IMILIGAGSAAVSIELFLVPNNFIDGGIIGVSLILDHLFmsnpLLNFALFVVLLNIPFMIFGYKYIGKTFLISTVIGIVG 99
Cdd:pfam02588   3 LLITLGSLLYAIGINFFLIPNNIATGGVTGIALILNYLT----GLPIGITNLLLNIPLLILGYKVLGKKFALKTLYAIIL 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 371569037  100 LALIESSL-HHVEAITTQPILATVFGGLLLGFGVGLVIRNGGSMDGTEILGILLTKKLPFSVGEFVMLINVFIFIWAGFV 178
Cdd:pfam02588  79 LSVFLDLLfPPVPPLTNDPLLAAIFGGVLLGIGVGIVFRSGGSTGGTDIIAMILNKYFGISVGKILLIIDFLIVLAAGFV 158
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 371569037  179 FGPEQAMYSFMTYYIAMKTIDAVIQGLDETKAVIIVADQYAEISDAIL 226
Cdd:pfam02588 159 FGWETALYSLISLFISSKVIDKVIEGFNQKKTVLIISDKPEEIADAIL 206
YitT_C cd16380
C-terminal domain of Bacillus subtilis YitT and similar protein domains; This domain, found in ...
204-288 3.50e-36

C-terminal domain of Bacillus subtilis YitT and similar protein domains; This domain, found in various bacterial proteins, has no known function. It has been given the designation DUF2179 and occurs at the C-terminus of the Bacillus subtilis membrane protein YitT.


Pssm-ID: 319864  Cd Length: 85  Bit Score: 124.41  E-value: 3.50e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 371569037 204 GLDETKAVIIVADQYAEISDAILHRLGRGTTKLQGKGGYTDESKEVIYAVVTRLEVTKLKSIVFEIDKNAFITIMNTHET 283
Cdd:cd16380    1 GFNQAKAVMIISDKSEEIAEAILEELGRGVTILKGEGGYTGEEKKVLYCVVSRRELVKLKRIVKEIDPKAFVIVSDVHEV 80

                 ....*
gi 371569037 284 RGGKF 288
Cdd:cd16380   81 LGEGF 85
 
Name Accession Description Interval E-value
YitT COG1284
Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains [Function ...
7-289 5.27e-91

Uncharacterized membrane-anchored protein YitT, contains DUF161 and DUF2179 domains [Function unknown];


Pssm-ID: 440895 [Multi-domain]  Cd Length: 285  Bit Score: 271.57  E-value: 5.27e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 371569037   7 HKRESFLHFIFRVIMILIGAGSAAVSIELFLVPNNFIDGGIIGVSLILDHLFmsnpLLNFALFVVLLNIPFMIFGYKYIG 86
Cdd:COG1284    2 KKKIKLKKKLKDYLLIILGALLYAIGLNFFLIPNNLADGGVTGIAIILSYLF----GLPVGILLLLLNIPLFILGYKFLG 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 371569037  87 KTFLISTVIGIVGLALIESSLHHV-EAITTQPILATVFGGLLLGFGVGLVIRNGGSMDGTEILGILLTKKLPFSVGEFVM 165
Cdd:COG1284   78 KRFGIKTIYGVLLLSLFLDLLPPIiPPLTDDPLLAAIFGGVLLGIGLGLVFRGGGSTGGTDIIAMILNKKTGISIGKILL 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 371569037 166 LINVFIFIWAGFVFGPEQAMYSFMTYYIAMKTIDAVIQGLDETKAVIIVADQYAEISDAILHRLGRGTTKLQGKGGYTDE 245
Cdd:COG1284  158 IIDAIIILLAGFVFGWETALYSLIALFITSKVIDFVIEGFNQKKAVFIISDKPEEIAEAILEELGRGVTILKGEGGYTGE 237
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 371569037 246 SKEVIYAVVTRLEVTKLKSIVFEIDKNAFITIMNTHETRGGKFK 289
Cdd:COG1284  238 EKKVLYTVVSRRELAKLKRIVKEIDPNAFVIVSDVSEVLGEGFK 281
YitT_membrane pfam02588
Uncharacterized 5xTM membrane BCR, YitT family COG1284; This is probably a bacterial ABC ...
20-226 3.46e-52

Uncharacterized 5xTM membrane BCR, YitT family COG1284; This is probably a bacterial ABC transporter permease (personal obs:Yeats C).


Pssm-ID: 426854  Cd Length: 206  Bit Score: 169.60  E-value: 3.46e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 371569037   20 IMILIGAGSAAVSIELFLVPNNFIDGGIIGVSLILDHLFmsnpLLNFALFVVLLNIPFMIFGYKYIGKTFLISTVIGIVG 99
Cdd:pfam02588   3 LLITLGSLLYAIGINFFLIPNNIATGGVTGIALILNYLT----GLPIGITNLLLNIPLLILGYKVLGKKFALKTLYAIIL 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 371569037  100 LALIESSL-HHVEAITTQPILATVFGGLLLGFGVGLVIRNGGSMDGTEILGILLTKKLPFSVGEFVMLINVFIFIWAGFV 178
Cdd:pfam02588  79 LSVFLDLLfPPVPPLTNDPLLAAIFGGVLLGIGVGIVFRSGGSTGGTDIIAMILNKYFGISVGKILLIIDFLIVLAAGFV 158
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 371569037  179 FGPEQAMYSFMTYYIAMKTIDAVIQGLDETKAVIIVADQYAEISDAIL 226
Cdd:pfam02588 159 FGWETALYSLISLFISSKVIDKVIEGFNQKKTVLIISDKPEEIADAIL 206
YitT_C cd16380
C-terminal domain of Bacillus subtilis YitT and similar protein domains; This domain, found in ...
204-288 3.50e-36

C-terminal domain of Bacillus subtilis YitT and similar protein domains; This domain, found in various bacterial proteins, has no known function. It has been given the designation DUF2179 and occurs at the C-terminus of the Bacillus subtilis membrane protein YitT.


Pssm-ID: 319864  Cd Length: 85  Bit Score: 124.41  E-value: 3.50e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 371569037 204 GLDETKAVIIVADQYAEISDAILHRLGRGTTKLQGKGGYTDESKEVIYAVVTRLEVTKLKSIVFEIDKNAFITIMNTHET 283
Cdd:cd16380    1 GFNQAKAVMIISDKSEEIAEAILEELGRGVTILKGEGGYTGEEKKVLYCVVSRRELVKLKRIVKEIDPKAFVIVSDVHEV 80

                 ....*
gi 371569037 284 RGGKF 288
Cdd:cd16380   81 LGEGF 85
YitT_C_like cd16379
C-terminal domain of Bacillus subtilis YitT and similar protein domains; This domain, found in ...
209-288 1.78e-25

C-terminal domain of Bacillus subtilis YitT and similar protein domains; This domain, found in various bacterial proteins, has no known function. It has been given the designation DUF2179 and occurs at the C-terminus of the Bacillus subtilis membrane protein YitT as well as in single-domain proteins.


Pssm-ID: 319863  Cd Length: 80  Bit Score: 96.36  E-value: 1.78e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 371569037 209 KAVIIVADQYAEISDAILHRLGRGTTKLQGKGGYtDESKEVIYAVVTRLEVTKLKSIVFEIDKNAFITIMNTHETRGGKF 288
Cdd:cd16379    2 KTVRIISDKSEEILAEILRELGRGVTILDGEGGY-GGERKVLYIVVKRKELPKLKKIIKEIDPKAFITIEDVREVLGGGF 80
DUF2179 pfam10035
Uncharacterized protein conserved in bacteria (DUF2179); This domain, found in various ...
231-285 1.54e-19

Uncharacterized protein conserved in bacteria (DUF2179); This domain, found in various hypothetical bacterial proteins, has no known function.


Pssm-ID: 462946  Cd Length: 55  Bit Score: 80.12  E-value: 1.54e-19
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 371569037  231 RGTTKLQGKGGYTDESKEVIYAVVTRLEVTKLKSIVFEIDKNAFITIMNTHETRG 285
Cdd:pfam10035   1 RGVTILKGEGGYSGEEKKVLYTVVSRKELAKLKEIIKEIDPKAFIIISDVSEVLG 55
YitT_C_like_1 cd16381
Proteins similar to the C-terminal domain of Bacillus subtilis YitT; This domain, ...
212-288 1.62e-06

Proteins similar to the C-terminal domain of Bacillus subtilis YitT; This domain, characteristic of various bacterial proteins, has no known function. It has been given the designation DUF2179 and is similar to the C-terminus of the Bacillus subtilis membrane protein.


Pssm-ID: 319865  Cd Length: 80  Bit Score: 45.12  E-value: 1.62e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 371569037 212 IIVADQYAEISDAiLHRLGRGTTKLQGKGGytDESKEVIYAVVTRLEVTKLKSIVFEIDKNAFITIMNTHETRGGKF 288
Cdd:cd16381    7 VITREDAEELAEA-LREEGFGVTVVDGEGR--DGPVLILFIVVKRKDLKELLKIIKEYDPKAFYTIEDVRSVSGGYF 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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