NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|354543911|emb|CCE40633|]
View 

hypothetical protein CPAR2_106680 [Candida parapsilosis]

Protein Classification

APC family permease( domain architecture ID 1903533)

APC (amino acid/polyamine/organocation) family permease is involved in the uptake of a specific amino acid and/or polyamine substrate with the concomitant import of a proton

Gene Ontology:  GO:0055085|GO:0022857
PubMed:  24038584|25043943|10931886
TCDB:  2.A.3

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
AA_permease_2 super family cl45918
Amino acid permease;
49-530 1.21e-100

Amino acid permease;


The actual alignment was detected with superfamily member TIGR00913:

Pssm-ID: 459263  Cd Length: 478  Bit Score: 313.45  E-value: 1.21e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911   49 QRRMNSRHVNLMIMGQSIGSGLFLGIRSPLHTSGSLSFFLAFTIyAVVVVYPLMQCIGVMCSYLP-IKGTFIHYSARYVD 127
Cdd:TIGR00913   1 KKSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPAGLLIGYAI-MGSIIYCVMQSLGEMATFYPvVSGSFATYASRFVD 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  128 PALGFASSLIYIYTCMMFVCIEATAVAQLIGYWSD-LNPGVWITLCILLYPLIGIFGCNIYGEVEFYSSILKVFLIMALM 206
Cdd:TIGR00913  80 PAFGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDkVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFI 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  207 LFSLISMCGGNPQGRAYGFQHWKEGGLFREYLVGGgtgKFFAWWSSLIWAGFAAGGADGFSMIASEVQRPRTTMATAAKR 286
Cdd:TIGR00913 160 ILSIILNCGGGPNHGYIGFRYWHDPGAFAGGTIGG---RFKGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAKR 236

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  287 VYIRVYLFYIGGVFFLNCLISSVNERLVEqlEAGSATSAGSPWVIGIEDVGVKGLASVINACVMTSAFSCGNAFFYCSTR 366
Cdd:TIGR00913 237 TFWRILVFYILTLFLIGFLVPYNDPRLLS--SSSSSDSAASPFVIAIQNHGIKVLPHIFNAVILISVLSAANSSLYASSR 314

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  367 SLYSASLAGYLPRFLSKCLKNGSPVYCVLVTFAVSLVAYLNVNEDGVVVFNWFVNLCATGLLLAYICMWWSYFQFRRAWE 446
Cdd:TIGR00913 315 TLYALAHQGLAPKIFAYVDRRGVPYVAVIVSSLFGLLAFLAVSKKEAEVFTWLLNISGLSGFFTWMCICLSHIRFRKAMK 394

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  447 AqhkQKIRNPEYPYFTgpkWLHPVLTYAGLIFTVLVVFFNGFWIFFPGNFSVSNLFTSYFAPAFFVCLFVFWKVFKKTKF 526
Cdd:TIGR00913 395 A---QGRSLDELPYKS---QTGPYGSYYALFFNILILIAQGYVAFAPVKFSAKSFFEAYLSLPIFIALYIGHKVYKRDKL 468


                  ....
gi 354543911  527 RTPL 530
Cdd:TIGR00913 469 IIKL 472
 
Name Accession Description Interval E-value
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
 49-530 1.21e-100

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 313.45  E-value: 1.21e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911   49 QRRMNSRHVNLMIMGQSIGSGLFLGIRSPLHTSGSLSFFLAFTIyAVVVVYPLMQCIGVMCSYLP-IKGTFIHYSARYVD 127
Cdd:TIGR00913   1 KKSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPAGLLIGYAI-MGSIIYCVMQSLGEMATFYPvVSGSFATYASRFVD 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  128 PALGFASSLIYIYTCMMFVCIEATAVAQLIGYWSD-LNPGVWITLCILLYPLIGIFGCNIYGEVEFYSSILKVFLIMALM 206
Cdd:TIGR00913  80 PAFGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDkVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFI 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  207 LFSLISMCGGNPQGRAYGFQHWKEGGLFREYLVGGgtgKFFAWWSSLIWAGFAAGGADGFSMIASEVQRPRTTMATAAKR 286
Cdd:TIGR00913 160 ILSIILNCGGGPNHGYIGFRYWHDPGAFAGGTIGG---RFKGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAKR 236

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  287 VYIRVYLFYIGGVFFLNCLISSVNERLVEqlEAGSATSAGSPWVIGIEDVGVKGLASVINACVMTSAFSCGNAFFYCSTR 366
Cdd:TIGR00913 237 TFWRILVFYILTLFLIGFLVPYNDPRLLS--SSSSSDSAASPFVIAIQNHGIKVLPHIFNAVILISVLSAANSSLYASSR 314

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  367 SLYSASLAGYLPRFLSKCLKNGSPVYCVLVTFAVSLVAYLNVNEDGVVVFNWFVNLCATGLLLAYICMWWSYFQFRRAWE 446
Cdd:TIGR00913 315 TLYALAHQGLAPKIFAYVDRRGVPYVAVIVSSLFGLLAFLAVSKKEAEVFTWLLNISGLSGFFTWMCICLSHIRFRKAMK 394

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  447 AqhkQKIRNPEYPYFTgpkWLHPVLTYAGLIFTVLVVFFNGFWIFFPGNFSVSNLFTSYFAPAFFVCLFVFWKVFKKTKF 526
Cdd:TIGR00913 395 A---QGRSLDELPYKS---QTGPYGSYYALFFNILILIAQGYVAFAPVKFSAKSFFEAYLSLPIFIALYIGHKVYKRDKL 468


                  ....
gi 354543911  527 RTPL 530
Cdd:TIGR00913 469 IIKL 472
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
41-538 7.12e-76

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 248.55  E-value: 7.12e-76
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  41 DPKKYGETQRRMNSRHVNLMIMGQSIGSGLFLGIRSPLHTSGSLSFFLAFTIYAVVVvYPLMQCIGVMCSYLPIKGTFIH 120
Cdd:COG0833    3 GSEKQNKLKRGLKSRHLSMIALGGVIGTGLFLASGYTISQAGPGGALLAYLLGGLMV-YFLMTSLGELAVAMPVSGSFQT 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 121 YSARYVDPALGFASSLIYIYTCMMFVCIEATAVAQLIGYW-SDLNPGVWITLCILLYPLIGIFGCNIYGEVEFYSSILKV 199
Cdd:COG0833   82 YATRFIDPAFGFAVGWNYWLNWAITVAAELTAAGIIMQYWfPDVPVWIWSLLFLALIFLLNALSVKAFGESEFWFSLIKV 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 200 FLIMA------LMLFSLISmcggnpqGRAYGFQHWKEG-GLFreylVGGGTGKFFAwwssliwagfaaggadgfSMI--- 269
Cdd:COG0833  162 ITVIAfiivglLMIFGIIG-------GHAPGFSNFTTGdGPF----PGGFLAILGV------------------MMIvgf 212

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 270 -----------ASEVQRPRTTMATAAKRVYIRVYLFYIGGVFFLNCLISSVNERLVEqleagsatsagSPWVIGIEDVGV 338
Cdd:COG0833  213 sfqgteligiaAGESENPEKTIPKAIRQVFWRILLFYILAIFVIAALIPYTDAGVAE-----------SPFTLVFERAGI 281

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 339 KGLASVINACVMTSAFSCGNAFFYCSTRSLYSASLAGYLPRFLSKCLKNGSPVYCVLVTFAVSLVAYL--NVNEDgvVVF 416
Cdd:COG0833  282 PYAADIMNAVILTAVLSAGNSGLYASTRMLWSLAKEGMAPKIFAKLNKRGVPLNALLATMAVGLLALLssFFGAG--TVY 359

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 417 NWFVNLCATGLLLAYICMWWSYFQFRRAWEAQHKQKirnPEYPYFTgpkWLHPVLTYAGLIFTVLVVFFNgfwiffpgNF 496
Cdd:COG0833  360 LWLLSISGLTGFIAWLGIAISHYRFRRAYVAQGGDL---EDLKYKA---PLFPFGPIFAFILCLIVIIGQ--------AF 425

                        490       500       510       520
                 ....*....|....*....|....*....|....*....|..
gi 354543911 497 SVSNLFTSYFAPAFFVCLFVFWKVFKKTKFRTPLTADITSGK 538
Cdd:COG0833  426 DPEQRIALYIGIPFFLACYLGYKLKKKTKLVPLEEMDLSPED 467
AA_permease pfam00324
Amino acid permease;
56-527 2.80e-66

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 222.97  E-value: 2.80e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911   56 HVNLMIMGQSIGSGLFLGIRSPLHTSGSLSFFLAFTIyAVVVVYPLMQCIGVMCSYLPIKGTFIHYSARYVDPALGFASS 135
Cdd:pfam00324   1 HVQMIALGGVIGTGLFVGSGSVLGQAGPAGALLGYLI-SGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATG 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  136 LIYIYTCMMFVCIEATAVAQLIGYWSD----LNPGVWITLCILLYPLIGIFGCNIYGEVEFYSSILKVFLIMALMLFSLI 211
Cdd:pfam00324  80 WNYWLSWITVLALELTAASILIQFWELvpdiPYLWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGII 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  212 SMCGGNPqGRAYGFQHWKEGGlFREYLVGGGTGKFFawwSSLIWAGFAAGGADGFSMIASEVQRPRTTMATAAKRVYIRV 291
Cdd:pfam00324 160 LLSGGNP-NDGAIFRYLGDNG-GKNNFPPGFGKGFI---SVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRI 234

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  292 YLFYIGGVFFLNCLISSVNERLVEqleagSATSAGSPWVIGIEDVGVKGLASVINACVMTSAFSCGNAFFYCSTRSLYSA 371
Cdd:pfam00324 235 TIFYILSLLAIGLLVPWNDPGLLN-----DSASAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSL 309

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  372 SLAGYLPRFLSKCLKNGSPVYCVLVTFAVSLVAYLNVNEDGVVVFNWFVNLCATGLLLAYICMWWSYFQFRRAWeaqHKQ 451
Cdd:pfam00324 310 ARDGLAPKFLKKVDKRGVPLRAILVSMVISLLALLLASLNPAIVFNFLLAISGLSGLIVWGLISLSHLRFRKAF---KYQ 386

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  452 KIRNPEYPYftgPKWLHPVLTYAGLIFTVLVVFFNGFWIFF-----PGNFSVSNLFTSYFAPAFFVCLFVFWKVFKKTKF 526
Cdd:pfam00324 387 GRSIDELPF---KAPLGPLGVILGLAAIIIILIIQFLYAFLpvpggPKNWGAGSFAAAYLIVLLFLIILIGVKLHVKNWK 463


                  .
gi 354543911  527 R 527
Cdd:pfam00324 464 P 464
PRK10249 PRK10249
phenylalanine transporter; Provisional
 49-523 1.52e-36

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 142.05  E-value: 1.52e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  49 QRRMNSRHVNLMIMGQSIGSGLFLGIRSPLHTSGSlSFFLAFTIyAVVVVYPLMQCIGVMCSYLPIKGTFIHYSARYVDP 128
Cdd:PRK10249  20 HRGLHNRHIQLIALGGAIGTGLFLGIGPAIQMAGP-AVLLGYGV-AGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGP 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 129 ALGFASSLIYiytCMMFVCI---EATAVAQLIGYW-SDLNPGVWITLCILLYPLIGIFGCNIYGEVEFYSSILKVFLIMA 204
Cdd:PRK10249  98 FAGFLSGWNY---WVMFVLVgmaELTAAGIYMQYWfPDVPTWIWAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIG 174

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 205 LMLFSLISMCGGNPQGRAYGFQHWKEGGLFreylvggGTGkffawWSSLIWAGFAAGGAD----GFSMIASEVQRPRTTM 280
Cdd:PRK10249 175 MIGFGLWLLFSGHGGEKASIDNLWRYGGFF-------ATG-----WNGLILSLAVIMFSFggleLIGITAAEARDPEKSI 242

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 281 ATAAKRVYIRVYLFYIGGVFFLNCLISSVNERlveqleagsatSAGSPWVIGIEDVGVKGLASVINACVMTSAFSCGNAF 360
Cdd:PRK10249 243 PKAVNQVVYRILLFYIGSLVVLLALYPWVEVK-----------SNSSPFVMIFHNLDSNVVASALNFVILVASLSVYNSG 311

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 361 FYCSTRSLYSASLAGYLPRFLSKCLKNGSPVYCVL----VTFAVSLVAYLNVNEdgvvVFNWFVNLCATGLLLAYICMWW 436
Cdd:PRK10249 312 VYSNSRMLFGLSVQGNAPKFLTRVSRRGVPINSLMlsgaITSLVVLINYLLPQK----AFGLLMALVVATLLLNWIMICL 387

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 437 SYFQFRraweAQHKQKIRNPEYPYFTGPKWLHPVLTYAGLIFtVLVVFFNGFWIffpgnfsvsnlfTSYFAPAFFVCLFV 516
Cdd:PRK10249 388 AHLRFR----AAMRRQGRETQFKALLYPFGNYLCIAFLGMIL-LLMCTMDDMRL------------SAILLPVWIVFLFV 450


                 ....*..
gi 354543911 517 FWKVFKK 523
Cdd:PRK10249 451 AFKTLRR 457
 
Name Accession Description Interval E-value
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
 49-530 1.21e-100

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 313.45  E-value: 1.21e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911   49 QRRMNSRHVNLMIMGQSIGSGLFLGIRSPLHTSGSLSFFLAFTIyAVVVVYPLMQCIGVMCSYLP-IKGTFIHYSARYVD 127
Cdd:TIGR00913   1 KKSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPAGLLIGYAI-MGSIIYCVMQSLGEMATFYPvVSGSFATYASRFVD 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  128 PALGFASSLIYIYTCMMFVCIEATAVAQLIGYWSD-LNPGVWITLCILLYPLIGIFGCNIYGEVEFYSSILKVFLIMALM 206
Cdd:TIGR00913  80 PAFGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDkVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFI 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  207 LFSLISMCGGNPQGRAYGFQHWKEGGLFREYLVGGgtgKFFAWWSSLIWAGFAAGGADGFSMIASEVQRPRTTMATAAKR 286
Cdd:TIGR00913 160 ILSIILNCGGGPNHGYIGFRYWHDPGAFAGGTIGG---RFKGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAKR 236

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  287 VYIRVYLFYIGGVFFLNCLISSVNERLVEqlEAGSATSAGSPWVIGIEDVGVKGLASVINACVMTSAFSCGNAFFYCSTR 366
Cdd:TIGR00913 237 TFWRILVFYILTLFLIGFLVPYNDPRLLS--SSSSSDSAASPFVIAIQNHGIKVLPHIFNAVILISVLSAANSSLYASSR 314

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  367 SLYSASLAGYLPRFLSKCLKNGSPVYCVLVTFAVSLVAYLNVNEDGVVVFNWFVNLCATGLLLAYICMWWSYFQFRRAWE 446
Cdd:TIGR00913 315 TLYALAHQGLAPKIFAYVDRRGVPYVAVIVSSLFGLLAFLAVSKKEAEVFTWLLNISGLSGFFTWMCICLSHIRFRKAMK 394

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  447 AqhkQKIRNPEYPYFTgpkWLHPVLTYAGLIFTVLVVFFNGFWIFFPGNFSVSNLFTSYFAPAFFVCLFVFWKVFKKTKF 526
Cdd:TIGR00913 395 A---QGRSLDELPYKS---QTGPYGSYYALFFNILILIAQGYVAFAPVKFSAKSFFEAYLSLPIFIALYIGHKVYKRDKL 468


                  ....
gi 354543911  527 RTPL 530
Cdd:TIGR00913 469 IIKL 472
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
41-538 7.12e-76

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 248.55  E-value: 7.12e-76
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  41 DPKKYGETQRRMNSRHVNLMIMGQSIGSGLFLGIRSPLHTSGSLSFFLAFTIYAVVVvYPLMQCIGVMCSYLPIKGTFIH 120
Cdd:COG0833    3 GSEKQNKLKRGLKSRHLSMIALGGVIGTGLFLASGYTISQAGPGGALLAYLLGGLMV-YFLMTSLGELAVAMPVSGSFQT 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 121 YSARYVDPALGFASSLIYIYTCMMFVCIEATAVAQLIGYW-SDLNPGVWITLCILLYPLIGIFGCNIYGEVEFYSSILKV 199
Cdd:COG0833   82 YATRFIDPAFGFAVGWNYWLNWAITVAAELTAAGIIMQYWfPDVPVWIWSLLFLALIFLLNALSVKAFGESEFWFSLIKV 161

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 200 FLIMA------LMLFSLISmcggnpqGRAYGFQHWKEG-GLFreylVGGGTGKFFAwwssliwagfaaggadgfSMI--- 269
Cdd:COG0833  162 ITVIAfiivglLMIFGIIG-------GHAPGFSNFTTGdGPF----PGGFLAILGV------------------MMIvgf 212

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 270 -----------ASEVQRPRTTMATAAKRVYIRVYLFYIGGVFFLNCLISSVNERLVEqleagsatsagSPWVIGIEDVGV 338
Cdd:COG0833  213 sfqgteligiaAGESENPEKTIPKAIRQVFWRILLFYILAIFVIAALIPYTDAGVAE-----------SPFTLVFERAGI 281

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 339 KGLASVINACVMTSAFSCGNAFFYCSTRSLYSASLAGYLPRFLSKCLKNGSPVYCVLVTFAVSLVAYL--NVNEDgvVVF 416
Cdd:COG0833  282 PYAADIMNAVILTAVLSAGNSGLYASTRMLWSLAKEGMAPKIFAKLNKRGVPLNALLATMAVGLLALLssFFGAG--TVY 359

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 417 NWFVNLCATGLLLAYICMWWSYFQFRRAWEAQHKQKirnPEYPYFTgpkWLHPVLTYAGLIFTVLVVFFNgfwiffpgNF 496
Cdd:COG0833  360 LWLLSISGLTGFIAWLGIAISHYRFRRAYVAQGGDL---EDLKYKA---PLFPFGPIFAFILCLIVIIGQ--------AF 425

                        490       500       510       520
                 ....*....|....*....|....*....|....*....|..
gi 354543911 497 SVSNLFTSYFAPAFFVCLFVFWKVFKKTKFRTPLTADITSGK 538
Cdd:COG0833  426 DPEQRIALYIGIPFFLACYLGYKLKKKTKLVPLEEMDLSPED 467
AA_permease pfam00324
Amino acid permease;
56-527 2.80e-66

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 222.97  E-value: 2.80e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911   56 HVNLMIMGQSIGSGLFLGIRSPLHTSGSLSFFLAFTIyAVVVVYPLMQCIGVMCSYLPIKGTFIHYSARYVDPALGFASS 135
Cdd:pfam00324   1 HVQMIALGGVIGTGLFVGSGSVLGQAGPAGALLGYLI-SGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATG 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  136 LIYIYTCMMFVCIEATAVAQLIGYWSD----LNPGVWITLCILLYPLIGIFGCNIYGEVEFYSSILKVFLIMALMLFSLI 211
Cdd:pfam00324  80 WNYWLSWITVLALELTAASILIQFWELvpdiPYLWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIVGII 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  212 SMCGGNPqGRAYGFQHWKEGGlFREYLVGGGTGKFFawwSSLIWAGFAAGGADGFSMIASEVQRPRTTMATAAKRVYIRV 291
Cdd:pfam00324 160 LLSGGNP-NDGAIFRYLGDNG-GKNNFPPGFGKGFI---SVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRI 234

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  292 YLFYIGGVFFLNCLISSVNERLVEqleagSATSAGSPWVIGIEDVGVKGLASVINACVMTSAFSCGNAFFYCSTRSLYSA 371
Cdd:pfam00324 235 TIFYILSLLAIGLLVPWNDPGLLN-----DSASAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSL 309

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  372 SLAGYLPRFLSKCLKNGSPVYCVLVTFAVSLVAYLNVNEDGVVVFNWFVNLCATGLLLAYICMWWSYFQFRRAWeaqHKQ 451
Cdd:pfam00324 310 ARDGLAPKFLKKVDKRGVPLRAILVSMVISLLALLLASLNPAIVFNFLLAISGLSGLIVWGLISLSHLRFRKAF---KYQ 386

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  452 KIRNPEYPYftgPKWLHPVLTYAGLIFTVLVVFFNGFWIFF-----PGNFSVSNLFTSYFAPAFFVCLFVFWKVFKKTKF 526
Cdd:pfam00324 387 GRSIDELPF---KAPLGPLGVILGLAAIIIILIIQFLYAFLpvpggPKNWGAGSFAAAYLIVLLFLIILIGVKLHVKNWK 463


                  .
gi 354543911  527 R 527
Cdd:pfam00324 464 P 464
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
49-525 6.21e-59

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 203.43  E-value: 6.21e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  49 QRRMNSRHVNLMIMGQSIGSGLFLGIRSPLHTSGSlSFFLAFTIyAVVVVYPLMQCIGVMCSYLPIKGTFIHYSARYVDP 128
Cdd:COG1113   14 KRGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGP-AVLLSYLI-AGLIVFLVMRALGEMAVANPVSGSFSDYAREYLGP 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 129 ALGFASSLIYIYtCMMFVCI-EATAVAQLIGYW-SDLNPGVWITLCILLYPLIGIFGCNIYGEVEFYSSILKVFLIMALM 206
Cdd:COG1113   92 WAGFVTGWLYWF-FWVLVGMaEATAVGIYLQFWfPDVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFALIKVVAIVAFI 170

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 207 LFSLISMCGG--NPQGRAYGFQH-WKEGGLFreylvgggTGKFFAWWSSLIWAGFAAGGADGFSMIASEVQRPRTTMATA 283
Cdd:COG1113  171 VVGLLLIFFGfgLPGGPPAGLSNlWDHGGFF--------PNGIGGVLAALQIVVFAFGGIELVGIAAAEAKDPEKTIPKA 242

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 284 AKRVYIRVYLFYIGGVFFLNCLISSvnerlveqleaGSATSAGSPWVIGIEDVGVKGLASVINACVMTSAFSCGNAFFYC 363
Cdd:COG1113  243 INSVIWRILLFYVGSLFVILALVPW-----------NQIGAGGSPFVTVFSLLGIPAAAGIMNFVVLTAALSSLNSGLYS 311

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 364 STRSLYSASLAGYLPRFLSKCLKNGSPVYCVLVTFAVSLVA-YLNVNEDGvVVFNWFVNLCATGLLLAYICMWWSYFQFR 442
Cdd:COG1113  312 TSRMLYSLAERGDAPKFFGKLSKRGVPVRAILLSAVVLLIGvVLNYLLPE-KAFTFLLSISGFGALFVWLMILVSQLKFR 390

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 443 RAWEAQHKQKirnPEYpyftgPKWLHPVLTYAGLIFTVLVvffngFWIFFpgnFSVSNLFTSYFAPAFFVCLFVFWKVFK 522
Cdd:COG1113  391 RRLPREGAAA---LKF-----KMPGFPYTSYLTLAFLAAV-----LVLMA---FDPDTRIALIVGPVWLALLVVGYFLVR 454


                 ...
gi 354543911 523 KTK 525
Cdd:COG1113  455 RRR 457
PRK10249 PRK10249
phenylalanine transporter; Provisional
 49-523 1.52e-36

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 142.05  E-value: 1.52e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  49 QRRMNSRHVNLMIMGQSIGSGLFLGIRSPLHTSGSlSFFLAFTIyAVVVVYPLMQCIGVMCSYLPIKGTFIHYSARYVDP 128
Cdd:PRK10249  20 HRGLHNRHIQLIALGGAIGTGLFLGIGPAIQMAGP-AVLLGYGV-AGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGP 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 129 ALGFASSLIYiytCMMFVCI---EATAVAQLIGYW-SDLNPGVWITLCILLYPLIGIFGCNIYGEVEFYSSILKVFLIMA 204
Cdd:PRK10249  98 FAGFLSGWNY---WVMFVLVgmaELTAAGIYMQYWfPDVPTWIWAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIG 174

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 205 LMLFSLISMCGGNPQGRAYGFQHWKEGGLFreylvggGTGkffawWSSLIWAGFAAGGAD----GFSMIASEVQRPRTTM 280
Cdd:PRK10249 175 MIGFGLWLLFSGHGGEKASIDNLWRYGGFF-------ATG-----WNGLILSLAVIMFSFggleLIGITAAEARDPEKSI 242

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 281 ATAAKRVYIRVYLFYIGGVFFLNCLISSVNERlveqleagsatSAGSPWVIGIEDVGVKGLASVINACVMTSAFSCGNAF 360
Cdd:PRK10249 243 PKAVNQVVYRILLFYIGSLVVLLALYPWVEVK-----------SNSSPFVMIFHNLDSNVVASALNFVILVASLSVYNSG 311

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 361 FYCSTRSLYSASLAGYLPRFLSKCLKNGSPVYCVL----VTFAVSLVAYLNVNEdgvvVFNWFVNLCATGLLLAYICMWW 436
Cdd:PRK10249 312 VYSNSRMLFGLSVQGNAPKFLTRVSRRGVPINSLMlsgaITSLVVLINYLLPQK----AFGLLMALVVATLLLNWIMICL 387

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 437 SYFQFRraweAQHKQKIRNPEYPYFTGPKWLHPVLTYAGLIFtVLVVFFNGFWIffpgnfsvsnlfTSYFAPAFFVCLFV 516
Cdd:PRK10249 388 AHLRFR----AAMRRQGRETQFKALLYPFGNYLCIAFLGMIL-LLMCTMDDMRL------------SAILLPVWIVFLFV 450


                 ....*..
gi 354543911 517 FWKVFKK 523
Cdd:PRK10249 451 AFKTLRR 457
PRK10836 PRK10836
lysine transporter; Provisional
 49-526 4.63e-36

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 141.11  E-value: 4.63e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  49 QRRMNSRHVNLMIMGQSIGSGLFLGIRSPLHTSGSLSFFLAFTIYAVVVvYPLMQCIGVMCSYLPIKGTFIHYSARYVDP 128
Cdd:PRK10836  14 RRELKARHLTMIAIGGSIGTGLFVASGATISQAGPGGALLSYMLIGLMV-YFLMTSLGELAAYMPVSGSFATYGQNYVEE 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 129 ALGFASSLIYIYTCMMFVCIEATAVAQLIGYWSDLNPG-VWITLCILLYPLIGIFGCNIYGEVEFYSSILKVFLIMALML 207
Cdd:PRK10836  93 GFGFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGwIWSALFLGVIFLLNYISVRGFGEAEYWFSLIKVTTVIVFII 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 208 FSLISMCGGNPQGRAYGFQHWKEGglfrEYLVGGGtgkFFAWWSSLIWAGFAAGGADGFSMIASEVQRPRTTMATAAKRV 287
Cdd:PRK10836 173 VGVLMIIGIFKGAEPAGWSNWTIG----DAPFAGG---FAAMIGVAMIVGFSFQGTELIGIAAGESEDPAKNIPRAVRQV 245

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 288 YIRVYLFYIGGVFFLNCLISSVNERLveqLEAGSATSAGSPWVIGIEDVGVKGLASVINACVMTSAFSCGNAFFYCSTRS 367
Cdd:PRK10836 246 FWRILLFYVFAILIISLIIPYTDPSL---LRNDVKDISVSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRM 322

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 368 LYSASLAGYLPRFLSKCLKNGSPVYCVLVTFAVSLVAYLNVNEDGVVVFNWFVNLCATGLLLAYICMWWSYFQFRRAWEA 447
Cdd:PRK10836 323 LYTLACDGKAPRIFAKLSRGGVPRNALYATTVIAGLCFLTSMFGNQTVYLWLLNTSGMTGFIAWLGIAISHYRFRRGYVL 402

                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 354543911 448 QHKQKirnPEYPYFTGPKWLHPVLTYaglIFTVLVVFFNGFWIFFPGNFSVSNLFTSYFAPAFFVCLFVFWKVFKKTKF 526
Cdd:PRK10836 403 QGHDL---NDLPYRSGFFPLGPIFAF---VLCLIITLGQNYEAFLKDTIDWGGVAATYIGIPLFLIIWFGYKLIKGTHF 475
PRK10238 PRK10238
aromatic amino acid transporter AroP;
40-481 2.63e-35

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 138.16  E-value: 2.63e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  40 LDPKKYGETQRR-MNSRHVNLMIMGQSIGSGLFLGIRSPLHTSGSlSFFLAFTIyAVVVVYPLMQCIGVMCSYLPIKGTF 118
Cdd:PRK10238   1 MEGQQHGEQLKRgLKNRHIQLIALGGAIGTGLFLGSASVIQSAGP-GIILGYAI-AGFIAFLIMRQLGEMVVEEPVAGSF 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 119 IHYSARYVDPALGFASSLIYIYTCMMFVCIEATAVAQLIGYWSDLNPgVWITLCILLYPL--IGIFGCNIYGEVEFYSSI 196
Cdd:PRK10238  79 SHFAYKYWGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYPEIP-TWVSAAVFFVVInaINLTNVKVFGEMEFWFAI 157

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 197 LKVFLIMALMLFSLISMCGGNPQGRAYGFQHWKEGGlfreYLVGGGTGKFFAwwssLIWAGFAAGGADGFSMIASEVQRP 276
Cdd:PRK10238 158 IKVIAVVAMIIFGGWLLFSGNGGPQATVSNLWDQGG----FLPHGFTGLVMM----MAIIMFSFGGLELVGITAAEADNP 229

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 277 RTTMATAAKRVYIRVYLFYIGGVFFLNCLissvnerlveqLEAGSATSAGSPWVIGIEDVGVKGLASVINACVMTSAFSC 356
Cdd:PRK10238 230 EQSIPKATNQVIYRILIFYIGSLAVLLSL-----------MPWTRVTADTSPFVLIFHELGDTFVANALNIVVLTAALSV 298

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 357 GNAFFYCSTRSLYSASLAGYLPRFLSKCLKNGSPVYCVLVTFAVS----LVAYLNVNEdgvvVFNWFVNLCATGLLLAYI 432
Cdd:PRK10238 299 YNSCVYCNSRMLFGLAQQGNAPKALASVDKRGVPVNTILVSALVTalcvLINYLAPES----AFGLLMALVVSALVINWA 374

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*....
gi 354543911 433 CMWWSYFQFRRAwEAQHKQKIRNPEYPYFTGpKWLHPVLTYAGLIFTVL 481
Cdd:PRK10238 375 MISLAHMKFRRA-KQEQGVVTRFPALLYPLG-NWICLLFMAAVLVIMLM 421
PRK11387 PRK11387
S-methylmethionine permease;
42-478 2.30e-31

S-methylmethionine permease;


Pssm-ID: 236904  Cd Length: 471  Bit Score: 127.27  E-value: 2.30e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  42 PKKYGETQRRMNSRHVNLMIMGQSIGSGLFLGIRSPLHTSGSLSFFLAFTIYAVVVvYPLMQCIGVMCSYLPIKGTFIHY 121
Cdd:PRK11387   6 SQQAGQFKRTMKVRHLVMLSLGGVIGTGLFFNTGYIISTTGAAGTLLAYLIGALVV-YLVMQCLGELSVAMPETGAFHVY 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 122 SARYVDPALGFASSLIYIYTCMMFVCIEATAVAQLIGYWSDLNPgVWI---TLCILLYpLIGIFGCNIYGEVEFYSSILK 198
Cdd:PRK11387  85 AARYLGPATGYTVAWLYWLTWTVALGSSLTAAGFCMQYWFPQVP-VWPwclLFCALIF-GLNVVSTRFFAEGEFWFSLIK 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 199 VFLIMALML------FSLISMCGGNPqgrAYGFQHWKEGGLFREylvgGGTGKFFawwsSLIWAGFAAGGADGFSMIASE 272
Cdd:PRK11387 163 VVTILAFIVlggaaiFGFIPMQDGSP---APGLRNLTAEGWFPH----GGLPILM----TMVAVNFAFSGTELIGIAAGE 231

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 273 VQRPRTTMATAAKRVYIRVYLFYIGGVFFLNCLISsvnerlveqleAGSATSAGSPWVIGIEDVGVKGLASVINACVMTS 352
Cdd:PRK11387 232 TENPAKVIPVAIRTTIARLVIFFVGTVLVLAALIP-----------MQQAGVEKSPFVLVFEKVGIPYAADIFNFVILTA 300

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 353 AFSCGNAFFYCSTRSLYSASLAGYLPRFLSKCLKNGSPVYCVLVTFAVSLVAYLN--VNEDGVVVFNWFVNLCATGLLLA 430
Cdd:PRK11387 301 ILSAANSGLYASGRMLWSLSNEGTLPACFARLTKRGIPLTALSVSMLGGLLALFSsvVAPDTVFVALSAISGFAVVAVWL 380

                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|..
gi 354543911 431 YICMwwSYFQFRRAWEAQHKQ----KIRNPEYPYFTGPKWLHPVLTYAGLIF 478
Cdd:PRK11387 381 SICA--SHFMFRRRHLRDGKAlselAYRAPWYPLTPILGFVLCLLACVGLAF 430
PRK10746 PRK10746
putative transport protein YifK; Provisional
 47-416 1.32e-29

putative transport protein YifK; Provisional


Pssm-ID: 182694  Cd Length: 461  Bit Score: 121.85  E-value: 1.32e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  47 ETQRRMNSRHVNLMIMGQSIGSGLFLGIRSPLHTSGSlSFFLAFtIYAVVVVYPLMQCIGVMCSYLPIKGTFIHYSARYV 126
Cdd:PRK10746   7 ELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGP-SVLLAY-IIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYM 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 127 DPALGFASSLIYIYTCMMFVCIEATAVAQLIGYW-SDLNPGVWITLCILLYPLIGIFGCNIYGEVEFYSSILKVFLIMAL 205
Cdd:PRK10746  85 SPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWfPEMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTTIIVM 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 206 MLFSL-ISMCGGNPQGRAYGFQHWKEGGLFreyLVGGGTGKFFAwwssLIWAGFAAGGADGFSMIASEVQRPRTTMATAA 284
Cdd:PRK10746 165 IVIGLgVIFFGFGNGGQSIGFSNLTEHGGF---FAGGWKGFLTA----LCIVVASYQGVELIGITAGEAKNPQVTLRSAV 237

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 285 KRVYIRVYLFYIGGVFFLnclissvnerlVEQLEAGSATSAGSPWVIGIEDVGVKGLASVINACVMTSAFSCGNAFFYCS 364
Cdd:PRK10746 238 GKVLWRILIFYVGAIFVI-----------VTIFPWNEIGSNGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSC 306

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 354543911 365 TRSLYSASLAGYLPRFLSKCLKNGSPVYCVLVTFAVSLVA----YLNVNEDGVVVF 416
Cdd:PRK10746 307 GRMLYALAKNRQLPAAMAKVSRHGVPVAGVAVSILILLVGsclnYIIPNPQRVFVY 362
PRK15049 PRK15049
L-asparagine permease;
49-444 2.82e-23

L-asparagine permease;


Pssm-ID: 185009  Cd Length: 499  Bit Score: 103.55  E-value: 2.82e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  49 QRRMNSRHVNLMIMGQSIGSGLFLGIRSPLHTSGSlSFFLAFTIYAVVVVYpLMQCIGVMCSYLPIKGTFIHYSARYVDP 128
Cdd:PRK15049  27 HKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGP-ALALVYLICGLFSFF-ILRALGELVLHRPSSGSFVSYAREFLGE 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 129 ALGFASSLIYIYTCMMFVCIEATAVAQLIGYWS---DLNPGVWITLCILLYPLIGIFGCNIYGEVEFYSSILKVFLIMAL 205
Cdd:PRK15049 105 KAAYVAGWMYFINWAMTGIVDITAVALYMHYWGafgGVPQWVFALAALTIVGTMNMIGVKWFAEMEFWFALIKVLAIVTF 184

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 206 MLFSLISMCGGNP-QGRAYGFQHWKE-GGLFREYLVGGGT---GKFFAWWSsliwagfaaggADGFSMIASEVQRPRTTM 280
Cdd:PRK15049 185 LVVGTVFLGSGQPlDGNTTGFHLITDnGGFFPHGLLPALVliqGVVFAFAS-----------IEMVGTAAGECKDPQTMV 253

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 281 ATAAKRVYIRVYLFYIGGVFFLNCLISsvnerlveqleaGSATSAG-SPWVIGIEDVGVKGLASVINACVMTSAFSCGNA 359
Cdd:PRK15049 254 PKAINSVIWRIGLFYVGSVVLLVMLLP------------WSAYQAGqSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNS 321

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 360 FFYCSTRSLYSASLAGYLPRFLSKCLKNGSPVYCVLVTFAVSLVAYLNVNEDGVVVFNWFVNLCATGLLLAYICMWWSYF 439
Cdd:PRK15049 322 GLYCTGRILRSMAMGGSAPSFMAKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIIVCQM 401


                 ....*
gi 354543911 440 QFRRA 444
Cdd:PRK15049 402 RLRKA 406
proY PRK10580
putative proline-specific permease; Provisional
 49-525 1.01e-22

putative proline-specific permease; Provisional


Pssm-ID: 182566 [Multi-domain]  Cd Length: 457  Bit Score: 101.43  E-value: 1.01e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  49 QRRMNSRHVNLMIMGQSIGSGLFLGIRSPLHTSGSlSFFLAFTIYAvVVVYPLMQCIGVMCSYLPIKGTFIHYSARYVDP 128
Cdd:PRK10580   8 KRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGP-SVLLAYIIGG-VAAYIIMRALGEMSVHNPAASSFSRYAQENLGP 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 129 ALGFASSLIYIYTCMMFVCIEATAVAQLIGYWSDLNPG-VWITLCILLYPLIGIFGCNIYGEVEFYSSILKV--FLIMAL 205
Cdd:PRK10580  86 LAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHwIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVatIIIMIV 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 206 MLFSLISMCGGNpQGRAYGFQH-WKEGGLFREYLVGggtgkffaWWSSLIWAGFAAGGADGFSMIASEVQRPRTTMATAA 284
Cdd:PRK10580 166 AGIGIIIWGIGN-GGQPTGIHNlWSNGGFFSNGWLG--------MVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAI 236

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 285 KRVYIRVYLFYIGGVFflncLISSVnerlveqLEAGSATSAGSPWVIGIEDVGVKGLASVINACVMTSAFSCGNAFFYCS 364
Cdd:PRK10580 237 NSVPMRILVFYVGTLF----VIMSI-------YPWNQVGTNGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGV 305

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 365 TRSLYSASLAGYLPRFLSKCLKNGSPVYCVLVTFAVSLVA-YLNVNEDGvVVFNWFVNLCATGLLLAYICMWWSYFQFRR 443
Cdd:PRK10580 306 GRMLHGMAEQGSAPKIFSKTSRRGIPWVTVLVMTTALLFAvYLNYIMPE-NVFLVIASLATFATVWVWIMILLSQIAFRR 384

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 444 AWEaqhKQKIRNPEYPYFTGpkwlhPVLTYAGLIFTVLVVFFNGfwiFFPgnfsvSNLFTSYFAPAFFVCLFVFWKVFKK 523
Cdd:PRK10580 385 RLP---PEEVKALKFKVPGG-----VATTIGGLIFLVFIIGLIG---YHP-----DTRISLYVGFAWIVLLLIGWMFKRR 448


                 ..
gi 354543911 524 TK 525
Cdd:PRK10580 449 HD 450
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
49-494 3.02e-20

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 93.42  E-value: 3.02e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  49 QRRMNSRHVNLMIMGQSIGSGLFLGIRSPLHTSGsLSFFLAFTIyAVVVVYPLMQCIGVMCSYLPIKGTFIHYSARYVDP 128
Cdd:COG0531   10 KRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAG-PAAILAWLI-AGLLALLVALSYAELASAFPRAGGAYTYARRALGP 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 129 ALGFASSLIYIYTCMMFVCIEATAVAQLIGYWSDLNPGVWITLCILLYP-LIGIFGCNIYGEVEFYSSILKVFLIMALML 207
Cdd:COG0531   88 LLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLIALVLILLLtLLNLRGVKESAKVNNILTVLKLLVLLLFIV 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 208 FSLISMCGGNPQGRAYGFQHWkegglfreYLVGGGTGkfFAWWSSLIWAGFaaggadgfSMIASEVQRPRTTMATAAKRV 287
Cdd:COG0531  168 VGLFAFDPANFTPFLPAGGGL--------SGVLAALA--LAFFAFTGFEAI--------ANLAEEAKNPKRNIPRAIILS 229

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 288 YIRVYLFYIGGVFFLNCLISsvnerlVEQLEAGSAtsagsPWVIGIEDVGVKGLASVINACVMTSAFSCGNAFFYCSTRS 367
Cdd:COG0531  230 LLIVGVLYILVSLALTGVVP------YDELAASGA-----PLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRL 298

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 368 LYSASLAGYLPRFLSKC-LKNGSPVYCVLVTFAVSLVAYLNVNEDgvvvFNWFVNLCATGLLLAYICMWWSYFQFRRawe 446
Cdd:COG0531  299 LYAMARDGLLPKVFAKVhPRFGTPVNAILLTGVIALLLLLLGAAS----FTALASLASVGVLLAYLLVALAVIVLRR--- 371

                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*....
gi 354543911 447 aqhkqkiRNPEYP-YFTGPKWLHPVLtyaGLIFTVLVVFFNGFWIFFPG 494
Cdd:COG0531  372 -------RRPDLPrPFRVPLPLIPIL---GILLCLFLLYLLGPGALLIG 410
PRK11049 PRK11049
D-alanine/D-serine/glycine permease; Provisional
 49-453 4.94e-20

D-alanine/D-serine/glycine permease; Provisional


Pssm-ID: 236830  Cd Length: 469  Bit Score: 93.26  E-value: 4.94e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  49 QRRMNSRHVNLMIMGQSIGSGLFLGIRSPLHTSGSlSFFLAFTIYAVVVVYpLMQCIG-VMCSYLPIKgTFIHYSARYVD 127
Cdd:PRK11049  19 RRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGP-SIIFVYMIIGFMLFF-VMRAMGeLLLSNLEYK-SFSDFASDLLG 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 128 PALGFASSLIYIYTCMMFVCIEATAVAQLIGYW-SDLNPGVWITLCILLYPLIGIFGCNIYGEVEFYSSILKVFLIMALM 206
Cdd:PRK11049  96 PWAGYFTGWTYWFCWVVTGIADVVAITAYAQFWfPDLSDWVASLAVVLLLLSLNLATVKMFGEMEFWFAMIKIVAIVALI 175

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 207 L--FSLISMCGGNPQGRAYGFQH-WKEGGLFREYLVGggtgkFFAWWSSLIWAGFAAGGAdgfSMIASEVQRPRTTMATA 283
Cdd:PRK11049 176 VvgLVMVAMHFQSPTGVEASFAHlWNDGGMFPKGLSG-----FFAGFQIAVFAFVGIELV---GTTAAETKDPEKSLPRA 247

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 284 AKRVYIRVYLFYiggVFFLNCLISSVNERlveqleagSATSAGSPWVIGIEDVGVKGLASVINACVMTSAFSCGNAFFYC 363
Cdd:PRK11049 248 INSIPIRIIMFY---VFALIVIMSVTPWS--------SVVPDKSPFVELFVLVGLPAAASVINFVVLTSAASSANSGVFS 316

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 364 STRSLYSASLAGYLPRFLSKCLK-----NGSPVYCVLVTFAVSLVaYLnvNEDGVVVFNWFVNLCATGLLLAYICMWWSY 438
Cdd:PRK11049 317 TSRMLFGLAQEGVAPKAFAKLSKravpaKGLTFSCICLLGGVVLL-YV--NPSVIGAFTLVTTVSAILFMFVWTIILCSY 393

                        410
                 ....*....|....*
gi 354543911 439 FQFRRAWEAQHKQKI 453
Cdd:PRK11049 394 LVYRKQRPHLHEKSI 408
PRK10197 PRK10197
GABA permease;
66-485 1.53e-15

GABA permease;


Pssm-ID: 182297  Cd Length: 446  Bit Score: 79.28  E-value: 1.53e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  66 IGSGLFLGIRSPLHTSGSlSFFLAFtIYAVVVVYPLMQCIGVMCSYLPIKGTFIHYSARYVDPALGFASSLIYIYTCMMF 145
Cdd:PRK10197   8 IGASLFVGSSVAIAEAGP-AVLLAY-LFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWWFWVLV 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 146 VCIEATAVAQLIGYWSDLNPgVWITLCILLYPLIG--IFGCNIYGEVEFYSSILKVFLIMALMLFSLISMCGGNPQGRAY 223
Cdd:PRK10197  86 IPLEANIAAMILHSWVPGIP-IWLFSLVITLALTGsnLLSVKNYGEFEFWLALCKVIAILAFIFLGAVAISGFYPYAEVS 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 224 GFQH-WKEGGLFreylvgggTGKFFAWWSSLIWAGFAAGGADGFSMIASEVQRPRTTMATAAKRVYIRVYLFYIGGVFFL 302
Cdd:PRK10197 165 GISRlWDSGGFM--------PNGFGAVLSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRATNSVIWRISIFYLCSIFVV 236

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 303 NCLISSVNERLVeqlEAGSATSAgspwvigIEDVGVKGLASVINACVMTSAFSCGNAFFYCSTRSLYSASLAGYLPRFLS 382
Cdd:PRK10197 237 VALIPWNMPGLK---AVGSYRSV-------LELLNIPHAKLIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDAPAVMG 306

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911 383 KCLKNGSPVYCVLVTFAVSLVAYLNVNEDGVVVFNWFVNLCATGLLLAYICMWWSYFQFRRAWEAQHKQ-KIRNPEYPYF 461
Cdd:PRK10197 307 KINRSKTPYVAVLLSTGAAFLTVVVNYYAPAKVFKFLIDSSGAIALLVYLVIAVSQLRMRKILRAEGSEiRLRMWLYPWL 386

                        410       420
                 ....*....|....*....|....
gi 354543911 462 TgpkWlhpvLTYAGLIFTVLVVFF 485
Cdd:PRK10197 387 T---W----LVIGFITFVLVVMLF 403
AA_permease_2 pfam13520
Amino acid permease;
60-513 1.70e-13

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 72.73  E-value: 1.70e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911   60 MIMGQSIGSGLFLGirsPLHTSGSLSFFLAFTIYAVVVVYPLMQCIGVMCSYLPIKGTFIHYSARYVDPALGFASSLIYI 139
Cdd:pfam13520   9 LVIGSVIGSGIFVA---PLVASGGPALIVWGWIAAIIFSLAVGLVYAELSSALPRSGGIYVYLENAFGKFVAFLAGWSNW 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  140 YTCMMFVCIEATAVAQLIGYW--SDLNPGVWIT-----LCILLYPLIGIFGCNIYGEVEFYSSILKVFLIMALMLFSLIs 212
Cdd:pfam13520  86 FAYVLGLASSASVAASYLLSAlgPDLVPTTWLTygiaiAILIIFAIINIRGVRESAKIQNILGILKLLLPLILIIILGL- 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  213 mcggnpqgraygfqHWKEGGLFREYLVGGGTGKFFAWWSSLIWAGFAAGGADGFSMIASEVQRprttmatAAKRVYIRVY 292
Cdd:pfam13520 165 --------------VTADGGGFNLLSGEWHTFFPDGWPGVFAGFLGVLWSFTGFESAANVSEE-------VKKRNVPKAI 223

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  293 LFYIGGVFFLNCLISSVNERLVEQLEAGSATSAGSPWVIGIEDVGVKGLASVINACVMTSAFSCGNAFFYCSTRSLYSAS 372
Cdd:pfam13520 224 FIGVIIVGVLYILVNIAFFGVVPDDEIALSSGLGQVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALA 303

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354543911  373 LAGYLP--RFLSKCLKNGSPVYCVLVTFAVSLVAYLNVNEdGVVVFNWFVNLCATGLLLAYICMWWSYFQFRRaweaqhk 450
Cdd:pfam13520 304 RDGVLPfsRFFAKVNKFGSPIRAIILTAILSLILLLLFLL-SPAAYNALLSLSAYGYLLSYLLPIIGLLILRK------- 375

                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 354543911  451 qkiRNPEYPYFTGPKWLHpvltyaglIFTVLVVFFNGFWIFFPGNFSVSNLFTSYFAPAFFVC 513
Cdd:pfam13520 376 ---KRPDLGRIPGRWPVA--------IFGILFSLFLIVALFFPPVGPATGSSLNYAIILIVAF 427
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH