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Conserved domains on  [gi|223642446|emb|CAX42691|]
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chitin transglycosidase, putative [Candida dubliniensis CD36]

Protein Classification

ChtBD1_GH16 and GH16_fungal_CRH1_transglycosylase domain-containing protein( domain architecture ID 10161223)

ChtBD1_GH16 and GH16_fungal_CRH1_transglycosylase domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
GH16_fungal_CRH1_transglycosylase cd02183
glycosylphosphatidylinositol-glucanosyltransferase; Group of fungal GH16 members related to ...
 97-305 2.02e-98

glycosylphosphatidylinositol-glucanosyltransferase; Group of fungal GH16 members related to Saccharomyces cerevisiae Crh1p. Chr1p and Crh2p are transglycosylases that are required for the linkage of chitin to beta(1-3)glucose branches of beta(1-6)glucan, an important step in the assembly of new cell wall. Both have been shown to be glycosylphosphatidylinositol (GPI)-anchored. A third homologous protein, Crr1p, functions in the formation of the spore wall. They belongs to the family 16 of glycosyl hydrolases that includes lichenase, xyloglucan endotransglycosylase (XET), beta-agarase, kappa-carrageenase, endo-beta-1,3-glucanase, endo-beta-1,3-1,4-glucanase, and endo-beta-galactosidase, all of which have a conserved jelly roll fold with a deep active site channel harboring the catalytic residues.


:

Pssm-ID: 185692 [Multi-domain]  Cd Length: 203  Bit Score: 294.46  E-value: 2.02e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223642446  97 DYLGNSTEADWVYT-GWVDYYDNSLLLQMPNHTTGTVVSSTKYLWYGKVGATLKTSHGGGVVTAFILFSDVQDEIDYEFV 175
Cdd:cd02183    2 DFTGNASSYDWTVTsGTVDYDDDGASLTIPKRGDGPTISSTFYIFYGKVEVTMKAAPGQGIVSSFVLQSDDLDEIDWEWV 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223642446 176 GYNLTSPQSNFYSQGIL-NYNNSRNSTV-NDTFEYYHNYEMDWTEDKIDWYVDGEKVRTLNKKDtwneTSNRFDYPQTPS 253
Cdd:cd02183   82 GGDLTQVQTNYFGKGNTtTYDRGGYHPVpNPQTEEFHTYTIDWTKDRITWYIDGKVVRTLTKAD----TTGGYGYPQTPM 157

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 223642446 254 RIQFSLWPGGDSSNGKGTIEWAGGLVNWDsedikkYGYFYAHIKEIYATTHD 305
Cdd:cd02183  158 RLQIGIWAGGDPSNAPGTIEWAGGETDYD------KGPFTMYVKSVTVTDYS 203
ChtBD1_GH16 cd06923
Hevein or Type 1 chitin binding domain subfamily that co-occurs with family 16 glycosyl ...
 28-74 2.24e-29

Hevein or Type 1 chitin binding domain subfamily that co-occurs with family 16 glycosyl hydrolases; This subfamily includes Saccharomyces cerevisiae Utr2p, also known as Crh2p, which participates in the cross-linking of chitin to beta(1-3)- and beta(1-6) glucan in the cell wall, and S. cerevisiae Crr1p, a putative transglycosidase which is needed for proper spore wall assembly. ChtBD1 is a lectin domain found in proteins from plants and fungi that bind N-acetylglucosamine, plant endochitinases, wound-induced proteins, and the alpha subunit of Kluyveromyces lactis killer toxin. This domain is involved in the recognition and/or binding of chitin subunits; it typically occurs N-terminal to glycosyl hydrolase domains in chitinases, together with other carbohydrate-binding domains, or by itself in tandem-repeat arrangements.


:

Pssm-ID: 211314  Cd Length: 47  Bit Score: 108.99  E-value: 2.24e-29
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 223642446  28 ITCSADSHCPEDKPCCSQFGICGTGAYCLGGCDIRFSYNLTSCMPMP 74
Cdd:cd06923    1 ITCNETSQCPEEWPCCSQYGECGTGPYCLGGCNPRYSFSLDSCMPMP 47
 
Name Accession Description Interval E-value
GH16_fungal_CRH1_transglycosylase cd02183
glycosylphosphatidylinositol-glucanosyltransferase; Group of fungal GH16 members related to ...
 97-305 2.02e-98

glycosylphosphatidylinositol-glucanosyltransferase; Group of fungal GH16 members related to Saccharomyces cerevisiae Crh1p. Chr1p and Crh2p are transglycosylases that are required for the linkage of chitin to beta(1-3)glucose branches of beta(1-6)glucan, an important step in the assembly of new cell wall. Both have been shown to be glycosylphosphatidylinositol (GPI)-anchored. A third homologous protein, Crr1p, functions in the formation of the spore wall. They belongs to the family 16 of glycosyl hydrolases that includes lichenase, xyloglucan endotransglycosylase (XET), beta-agarase, kappa-carrageenase, endo-beta-1,3-glucanase, endo-beta-1,3-1,4-glucanase, and endo-beta-galactosidase, all of which have a conserved jelly roll fold with a deep active site channel harboring the catalytic residues.


Pssm-ID: 185692 [Multi-domain]  Cd Length: 203  Bit Score: 294.46  E-value: 2.02e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223642446  97 DYLGNSTEADWVYT-GWVDYYDNSLLLQMPNHTTGTVVSSTKYLWYGKVGATLKTSHGGGVVTAFILFSDVQDEIDYEFV 175
Cdd:cd02183    2 DFTGNASSYDWTVTsGTVDYDDDGASLTIPKRGDGPTISSTFYIFYGKVEVTMKAAPGQGIVSSFVLQSDDLDEIDWEWV 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223642446 176 GYNLTSPQSNFYSQGIL-NYNNSRNSTV-NDTFEYYHNYEMDWTEDKIDWYVDGEKVRTLNKKDtwneTSNRFDYPQTPS 253
Cdd:cd02183   82 GGDLTQVQTNYFGKGNTtTYDRGGYHPVpNPQTEEFHTYTIDWTKDRITWYIDGKVVRTLTKAD----TTGGYGYPQTPM 157

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 223642446 254 RIQFSLWPGGDSSNGKGTIEWAGGLVNWDsedikkYGYFYAHIKEIYATTHD 305
Cdd:cd02183  158 RLQIGIWAGGDPSNAPGTIEWAGGETDYD------KGPFTMYVKSVTVTDYS 203
Glyco_hydro_16 pfam00722
Glycosyl hydrolases family 16;
113-276 1.27e-59

Glycosyl hydrolases family 16;


Pssm-ID: 395585 [Multi-domain]  Cd Length: 168  Bit Score: 193.19  E-value: 1.27e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223642446  113 VDYYDNSLLLQMPNHTtGTVVSSTKYLWYGKVGATLKTSHGGGVVTAFILFS---DVQDEIDYEFVGYNLTSPQSNFYSQ 189
Cdd:pfam00722   6 VSVSNGGLTLTLDKYT-GSGFQSKFYYLYGKVEARIKAARGAGVVTAFYLSSedwDDHDEIDFEFLGNDTGQVQTNVYGN 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223642446  190 GILNYNNSRNSTVNDTFEYYHNYEMDWTEDKIDWYVDGEKVRTLNKKDTWNetsnrFDYPQTPSRIQFSLWPGGDSSN-- 267
Cdd:pfam00722  85 GKGNRGEQRFSLWFDPTADFHTYSILWNPDKITWYVDGVPVRTLKNNDAGG-----VPYPQTPMRLYVSLWPGGDWATpg 159


                  ....*....
gi 223642446  268 GKGTIEWAG 276
Cdd:pfam00722 160 GGVKIDWAG 168
ChtBD1_GH16 cd06923
Hevein or Type 1 chitin binding domain subfamily that co-occurs with family 16 glycosyl ...
 28-74 2.24e-29

Hevein or Type 1 chitin binding domain subfamily that co-occurs with family 16 glycosyl hydrolases; This subfamily includes Saccharomyces cerevisiae Utr2p, also known as Crh2p, which participates in the cross-linking of chitin to beta(1-3)- and beta(1-6) glucan in the cell wall, and S. cerevisiae Crr1p, a putative transglycosidase which is needed for proper spore wall assembly. ChtBD1 is a lectin domain found in proteins from plants and fungi that bind N-acetylglucosamine, plant endochitinases, wound-induced proteins, and the alpha subunit of Kluyveromyces lactis killer toxin. This domain is involved in the recognition and/or binding of chitin subunits; it typically occurs N-terminal to glycosyl hydrolase domains in chitinases, together with other carbohydrate-binding domains, or by itself in tandem-repeat arrangements.


Pssm-ID: 211314  Cd Length: 47  Bit Score: 108.99  E-value: 2.24e-29
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 223642446  28 ITCSADSHCPEDKPCCSQFGICGTGAYCLGGCDIRFSYNLTSCMPMP 74
Cdd:cd06923    1 ITCNETSQCPEEWPCCSQYGECGTGPYCLGGCNPRYSFSLDSCMPMP 47
BglS COG2273
Beta-glucanase, GH16 family [Carbohydrate transport and metabolism];
126-264 3.10e-18

Beta-glucanase, GH16 family [Carbohydrate transport and metabolism];


Pssm-ID: 441874 [Multi-domain]  Cd Length: 259  Bit Score: 84.27  E-value: 3.10e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223642446 126 NHTTGTVVSSTKYLW-YGKVGATLKTSHGGGVVTAFILFSD-------VQDEID-YEFVGYNLTSPQSNFYSQGilnYNN 196
Cdd:COG2273   91 PYTSGRITTKGKFSFtYGRFEARAKLPKGQGLWPAFWMLGGdidggwpASGEIDiMEFVGKDPNKVHGNVHYGG---YNG 167

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 223642446 197 SRNSTVNDTFEY-----YHNYEMDWTEDKIDWYVDGEKVRTLNKKDTWNETSnrFDYPQtpsRIQFSLWPGGD 264
Cdd:COG2273  168 GEGIGASYDLPFdasddFHTYAVEWTPDSIRWYVDGVLVHTVTPADVGGPWP--FDQPF---YLILNLAVGGN 235
PLN03161 PLN03161
Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional
 126-283 3.89e-09

Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional


Pssm-ID: 178706 [Multi-domain]  Cd Length: 291  Bit Score: 57.60  E-value: 3.89e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223642446 126 NHTTGTVVSSTKYLWYGKVGATLKTSHG--GGVVTAFILFS--DVQDEIDYEFVGYNLTSP---QSNFYSQGilnyNNSR 198
Cdd:PLN03161  54 DQSSGSGIKSKRAFLFGSIEMLIKLVPGnsAGTVTAYYLSStgSRHDEIDFEFLGNVSGQPytiHTNIYTQG----NGSR 129

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223642446 199 NSTVNDTFEY---YHNYEMDWTEDKIDWYVDGEKVRTLNkkdtwNETSNRFDYPQTPS-RIQFSLWPGGDssngkgtieW 274
Cdd:PLN03161 130 EQQFRPWFDPtadFHNYTIHWNPSEVVWYVDGTPIRVFR-----NYENEGIAYPNKQGmRVYSSLWNADN---------W 195

                        170
                 ....*....|...
gi 223642446 275 A--GGLV--NWDS 283
Cdd:PLN03161 196 AtqGGRVkiDWTL 208
Chitin_bind_1 pfam00187
Chitin recognition protein;
36-59 9.45e-05

Chitin recognition protein;


Pssm-ID: 459705  Cd Length: 38  Bit Score: 39.45  E-value: 9.45e-05
                          10        20
                  ....*....|....*....|....*
gi 223642446   36 CPEDKpCCSQFGICGTG-AYCLGGC 59
Cdd:pfam00187  11 CPNNL-CCSQYGYCGTTsDYCGDGC 34
ChtBD1 smart00270
Chitin binding domain;
36-59 1.17e-03

Chitin binding domain;


Pssm-ID: 214593  Cd Length: 38  Bit Score: 36.58  E-value: 1.17e-03
                           10        20
                   ....*....|....*....|....*
gi 223642446    36 CPeDKPCCSQFGICGTGA-YCLGGC 59
Cdd:smart00270  11 CP-NNLCCSQFGYCGSGDeYCGRGC 34
 
Name Accession Description Interval E-value
GH16_fungal_CRH1_transglycosylase cd02183
glycosylphosphatidylinositol-glucanosyltransferase; Group of fungal GH16 members related to ...
 97-305 2.02e-98

glycosylphosphatidylinositol-glucanosyltransferase; Group of fungal GH16 members related to Saccharomyces cerevisiae Crh1p. Chr1p and Crh2p are transglycosylases that are required for the linkage of chitin to beta(1-3)glucose branches of beta(1-6)glucan, an important step in the assembly of new cell wall. Both have been shown to be glycosylphosphatidylinositol (GPI)-anchored. A third homologous protein, Crr1p, functions in the formation of the spore wall. They belongs to the family 16 of glycosyl hydrolases that includes lichenase, xyloglucan endotransglycosylase (XET), beta-agarase, kappa-carrageenase, endo-beta-1,3-glucanase, endo-beta-1,3-1,4-glucanase, and endo-beta-galactosidase, all of which have a conserved jelly roll fold with a deep active site channel harboring the catalytic residues.


Pssm-ID: 185692 [Multi-domain]  Cd Length: 203  Bit Score: 294.46  E-value: 2.02e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223642446  97 DYLGNSTEADWVYT-GWVDYYDNSLLLQMPNHTTGTVVSSTKYLWYGKVGATLKTSHGGGVVTAFILFSDVQDEIDYEFV 175
Cdd:cd02183    2 DFTGNASSYDWTVTsGTVDYDDDGASLTIPKRGDGPTISSTFYIFYGKVEVTMKAAPGQGIVSSFVLQSDDLDEIDWEWV 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223642446 176 GYNLTSPQSNFYSQGIL-NYNNSRNSTV-NDTFEYYHNYEMDWTEDKIDWYVDGEKVRTLNKKDtwneTSNRFDYPQTPS 253
Cdd:cd02183   82 GGDLTQVQTNYFGKGNTtTYDRGGYHPVpNPQTEEFHTYTIDWTKDRITWYIDGKVVRTLTKAD----TTGGYGYPQTPM 157

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 223642446 254 RIQFSLWPGGDSSNGKGTIEWAGGLVNWDsedikkYGYFYAHIKEIYATTHD 305
Cdd:cd02183  158 RLQIGIWAGGDPSNAPGTIEWAGGETDYD------KGPFTMYVKSVTVTDYS 203
Glyco_hydro_16 pfam00722
Glycosyl hydrolases family 16;
113-276 1.27e-59

Glycosyl hydrolases family 16;


Pssm-ID: 395585 [Multi-domain]  Cd Length: 168  Bit Score: 193.19  E-value: 1.27e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223642446  113 VDYYDNSLLLQMPNHTtGTVVSSTKYLWYGKVGATLKTSHGGGVVTAFILFS---DVQDEIDYEFVGYNLTSPQSNFYSQ 189
Cdd:pfam00722   6 VSVSNGGLTLTLDKYT-GSGFQSKFYYLYGKVEARIKAARGAGVVTAFYLSSedwDDHDEIDFEFLGNDTGQVQTNVYGN 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223642446  190 GILNYNNSRNSTVNDTFEYYHNYEMDWTEDKIDWYVDGEKVRTLNKKDTWNetsnrFDYPQTPSRIQFSLWPGGDSSN-- 267
Cdd:pfam00722  85 GKGNRGEQRFSLWFDPTADFHTYSILWNPDKITWYVDGVPVRTLKNNDAGG-----VPYPQTPMRLYVSLWPGGDWATpg 159


                  ....*....
gi 223642446  268 GKGTIEWAG 276
Cdd:pfam00722 160 GGVKIDWAG 168
ChtBD1_GH16 cd06923
Hevein or Type 1 chitin binding domain subfamily that co-occurs with family 16 glycosyl ...
 28-74 2.24e-29

Hevein or Type 1 chitin binding domain subfamily that co-occurs with family 16 glycosyl hydrolases; This subfamily includes Saccharomyces cerevisiae Utr2p, also known as Crh2p, which participates in the cross-linking of chitin to beta(1-3)- and beta(1-6) glucan in the cell wall, and S. cerevisiae Crr1p, a putative transglycosidase which is needed for proper spore wall assembly. ChtBD1 is a lectin domain found in proteins from plants and fungi that bind N-acetylglucosamine, plant endochitinases, wound-induced proteins, and the alpha subunit of Kluyveromyces lactis killer toxin. This domain is involved in the recognition and/or binding of chitin subunits; it typically occurs N-terminal to glycosyl hydrolase domains in chitinases, together with other carbohydrate-binding domains, or by itself in tandem-repeat arrangements.


Pssm-ID: 211314  Cd Length: 47  Bit Score: 108.99  E-value: 2.24e-29
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 223642446  28 ITCSADSHCPEDKPCCSQFGICGTGAYCLGGCDIRFSYNLTSCMPMP 74
Cdd:cd06923    1 ITCNETSQCPEEWPCCSQYGECGTGPYCLGGCNPRYSFSLDSCMPMP 47
GH16_lichenase cd02175
lichenase, member of glycosyl hydrolase family 16; Lichenase, also known as 1,3-1, ...
 135-276 1.24e-22

lichenase, member of glycosyl hydrolase family 16; Lichenase, also known as 1,3-1,4-beta-glucanase, is a member of glycosyl hydrolase family 16, that specifically cleaves 1,4-beta-D-glucosidic bonds in mixed-linked beta glucans that also contain 1,3-beta-D-glucosidic linkages. Natural substrates of beta-glucanase are beta-glucans from grain endosperm cell walls or lichenan from the Islandic moss, Cetraria islandica. This protein is found not only in bacteria but also in anaerobic fungi. This domain includes two seven-stranded antiparallel beta-sheets that are adjacent to one another forming a compact, jellyroll beta-sandwich structure.


Pssm-ID: 185684 [Multi-domain]  Cd Length: 212  Bit Score: 95.80  E-value: 1.24e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223642446 135 STKYLWYGKVGATLKTSHGGGVVTAFILFS-----DVQDEIDYEFVGYNLTSPQSNFYSQGIlnynnSRNSTVN----DT 205
Cdd:cd02175   62 TRGFYGYGRYEVRMKPAKGSGVVSSFFTYTgpydgDPHDEIDIEFLGKDTTKVQFNYYTNGV-----GGHEKLIdlgfDA 136

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 223642446 206 FEYYHNYEMDWTEDKIDWYVDGEKVRTlnkkdtwnETSNRFDYPQTPSRIQFSLWPggdssnGKGTIEWAG 276
Cdd:cd02175  137 SEGFHTYAFEWEPDSIRWYVDGELVHE--------ATATDPNIPDTPGKIMMNLWP------GDGVDDWLG 193
BglS COG2273
Beta-glucanase, GH16 family [Carbohydrate transport and metabolism];
126-264 3.10e-18

Beta-glucanase, GH16 family [Carbohydrate transport and metabolism];


Pssm-ID: 441874 [Multi-domain]  Cd Length: 259  Bit Score: 84.27  E-value: 3.10e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223642446 126 NHTTGTVVSSTKYLW-YGKVGATLKTSHGGGVVTAFILFSD-------VQDEID-YEFVGYNLTSPQSNFYSQGilnYNN 196
Cdd:COG2273   91 PYTSGRITTKGKFSFtYGRFEARAKLPKGQGLWPAFWMLGGdidggwpASGEIDiMEFVGKDPNKVHGNVHYGG---YNG 167

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 223642446 197 SRNSTVNDTFEY-----YHNYEMDWTEDKIDWYVDGEKVRTLNKKDTWNETSnrFDYPQtpsRIQFSLWPGGD 264
Cdd:COG2273  168 GEGIGASYDLPFdasddFHTYAVEWTPDSIRWYVDGVLVHTVTPADVGGPWP--FDQPF---YLILNLAVGGN 235
Glyco_hydrolase_16 cd00413
glycosyl hydrolase family 16; The O-Glycosyl hydrolases are a widespread group of enzymes that ...
 125-271 2.59e-15

glycosyl hydrolase family 16; The O-Glycosyl hydrolases are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A glycosyl hydrolase classification system based on sequence similarity has led to the definition of more than 95 different families inlcuding glycosyl hydrolase family 16. Family 16 includes lichenase, xyloglucan endotransglycosylase (XET), beta-agarase, kappa-carrageenase, endo-beta-1,3-glucanase, endo-beta-1,3-1,4-glucanase, and endo-beta-galactosidase, all of which have a conserved jelly roll fold with a deep active site channel harboring the catalytic residues.


Pssm-ID: 185683 [Multi-domain]  Cd Length: 210  Bit Score: 74.78  E-value: 2.59e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223642446 125 PNHTTGTVVSSTKYLWYGKVGATLKTSHGGGVVTAFILFSD-----VQDEIDYEFVGYNLTSPQSNF----YSQGILNYN 195
Cdd:cd00413   51 GPYSSAEIDSQKNNYTYGYYEARAKLAGGPGAVSAFWTYSDdddppDGGEIDIEFLGRDPTTVQTNVhwpgYGAGATTGE 130

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 223642446 196 NSRNSTVNDTFEYYHNYEMDWTEDKIDWYVDGEKVRTLNkkdtwnetsnrFDYPQTPSRIQFSLWPGGDSSNGKGT 271
Cdd:cd00413  131 EKSVHLPFDPADDFHTYRVDWTPGEITFYVDGVLVATIT-----------NQVPDDPMNIILNLWSDGGWWWGGPP 195
GH16_laminarinase_like cd08023
Laminarinase, member of the glycosyl hydrolase family 16; Laminarinase, also known as glucan ...
 169-250 4.29e-11

Laminarinase, member of the glycosyl hydrolase family 16; Laminarinase, also known as glucan endo-1,3-beta-D-glucosidase, is a glycosyl hydrolase family 16 member that hydrolyzes 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans such as laminarins, curdlans, paramylons, and pachymans, with very limited action on mixed-link (1,3-1,4-)-beta-D-glucans.


Pssm-ID: 185693 [Multi-domain]  Cd Length: 235  Bit Score: 62.64  E-value: 4.29e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223642446 169 EID-YEFVGYNLTSPQSNFYSQGILNYNNSRNSTVN----DTFEYYHNYEMDWTEDKIDWYVDGEKVRTLNKKDTWNETS 243
Cdd:cd08023  115 EIDiMEYVGNEPNTVYGTLHGGATNDGNNGSGGSYTlptdDLSDDFHTYAVEWTPDKITFYVDGKLYFTYTNPNTDNGGQ 194


                 ....*..
gi 223642446 244 NRFDYPQ 250
Cdd:cd08023  195 WPFDQPF 201
GH16_XET cd02176
Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16; Xyloglucan ...
 133-295 7.66e-11

Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16; Xyloglucan endotransglycosylases (XETs) cleave and religate xyloglucan polymers in plant cell walls via a transglycosylation mechanism. Xyloglucan is a soluble hemicellulose with a backbone of beta-1,4-linked glucose units, partially substituted with alpha-1,6-linked xylopyranose branches. It binds noncovalently to cellulose, cross-linking the adjacent cellulose microfibrils, giving it a key structural role as a matrix polymer. Therefore, XET plays an important role in all plant processes that require cell wall remodeling.


Pssm-ID: 185685 [Multi-domain]  Cd Length: 263  Bit Score: 62.60  E-value: 7.66e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223642446 133 VSSTKYLwYGKVGATLKTSHG--GGVVTAFILFS---DVQDEIDYEFVG------YNLtspQSNFYSQGILNynnsRNST 201
Cdd:cd02176   41 KSKNKYL-FGFFSMRIKLPPGdsAGTVTAFYLSSqgpDNHDEIDFEFLGnvtgqpYTL---QTNVFANGVGG----REQR 112

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223642446 202 VN---DTFEYYHNYEMDWTEDKIDWYVDGEKVRTLNkkdtwNETSNRFDYP-QTPSRIQFSLWPGGDssngkgtieWA-- 275
Cdd:cd02176  113 IYlwfDPTADFHTYSILWNPHQIVFYVDDVPIRVFK-----NNEALGVPYPsSQPMGVYASIWDGSD---------WAtq 178

                        170       180
                 ....*....|....*....|..
gi 223642446 276 GGLV--NWdsedikKYGYFYAH 295
Cdd:cd02176  179 GGRVkiDW------SYAPFVAS 194
PLN03161 PLN03161
Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional
 126-283 3.89e-09

Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional


Pssm-ID: 178706 [Multi-domain]  Cd Length: 291  Bit Score: 57.60  E-value: 3.89e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223642446 126 NHTTGTVVSSTKYLWYGKVGATLKTSHG--GGVVTAFILFS--DVQDEIDYEFVGYNLTSP---QSNFYSQGilnyNNSR 198
Cdd:PLN03161  54 DQSSGSGIKSKRAFLFGSIEMLIKLVPGnsAGTVTAYYLSStgSRHDEIDFEFLGNVSGQPytiHTNIYTQG----NGSR 129

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223642446 199 NSTVNDTFEY---YHNYEMDWTEDKIDWYVDGEKVRTLNkkdtwNETSNRFDYPQTPS-RIQFSLWPGGDssngkgtieW 274
Cdd:PLN03161 130 EQQFRPWFDPtadFHNYTIHWNPSEVVWYVDGTPIRVFR-----NYENEGIAYPNKQGmRVYSSLWNADN---------W 195

                        170
                 ....*....|...
gi 223642446 275 A--GGLV--NWDS 283
Cdd:PLN03161 196 AtqGGRVkiDWTL 208
ChtBD1 cd00035
Hevein or type 1 chitin binding domain; Hevein or type 1 chitin binding domain (ChtBD1), a ...
 30-60 6.00e-06

Hevein or type 1 chitin binding domain; Hevein or type 1 chitin binding domain (ChtBD1), a lectin domain found in proteins from plants and fungi that bind N-acetylglucosamine, plant endochitinases, wound-induced proteins such as hevein, a major IgE-binding allergen in natural rubber latex, and the alpha subunit of Kluyveromyces lactis killer toxin. This domain is involved in the recognition and/or binding of chitin subunits; it typically occurs N-terminal to glycosyl hydrolase domains in chitinases, together with other carbohydrate-binding domains, or by itself in tandem-repeat arrangements.


Pssm-ID: 211311  Cd Length: 39  Bit Score: 43.14  E-value: 6.00e-06
                         10        20        30
                 ....*....|....*....|....*....|....*
gi 223642446  30 CSADSH---CPEDkPCCSQFGICGTG-AYCLGGCD 60
Cdd:cd00035    2 CGSQAGgppCPNN-LCCSQYGYCGTGdDYCGEGCQ 35
GH16_beta_agarase cd02178
Beta-agarase, member of glycosyl hydrolase family 16; Beta-agarase is a glycosyl hydrolase ...
 127-250 1.74e-05

Beta-agarase, member of glycosyl hydrolase family 16; Beta-agarase is a glycosyl hydrolase family 16 (GH16) member that hydrolyzes the internal beta-1,4-linkage of agarose, a hydrophilic polysaccharide found in the cell wall of Rhodophyceaea, marine red algae. Agarose is a linear chain of galactose units linked by alternating L-alpha-1,3- and D-beta-1,4-linkages that are additionally modified by a 3,6-anhydro-bridge. Agarose forms thermo-reversible gels that are widely used in the food industry or as a laboratory medium. While beta-agarases are also found in two other families derived from the sequence-based classification of glycosyl hydrolases (GH50, and GH86) the GH16 members are most abundant. This domain adopts a curved beta-sandwich conformation, with a tunnel-shaped active site cavity, referred to as a jellyroll fold.


Pssm-ID: 185687  Cd Length: 258  Bit Score: 46.19  E-value: 1.74e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 223642446 127 HTTGTVVSSTKYLwYGKVGATLKTShGGGVVTAFILFSDVQD---EID-YEFVGYNLTSPQSN--------FYSQGILNY 194
Cdd:cd02178   85 VTTGSITSKEKVK-YGYFEARAKAS-NLPMSSAFWLLSDTKDsttEIDiLEHYGGDREEWFATrmnsnthvFIRDPEQDY 162

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 223642446 195 N-NSRNSTVNDTFEY---YHNYEMDWT-EDKIDWYVDGEKVRTLNKKDTWNETSnrFDYPQ 250
Cdd:cd02178  163 QpKDDGSWYYNPTELaddFHVYGVYWKdPDTIRFYIDGVLVRTVENSEITDGTG--FDQPM 221
Chitin_bind_1 pfam00187
Chitin recognition protein;
36-59 9.45e-05

Chitin recognition protein;


Pssm-ID: 459705  Cd Length: 38  Bit Score: 39.45  E-value: 9.45e-05
                          10        20
                  ....*....|....*....|....*
gi 223642446   36 CPEDKpCCSQFGICGTG-AYCLGGC 59
Cdd:pfam00187  11 CPNNL-CCSQYGYCGTTsDYCGDGC 34
WAP cd00199
whey acidic protein-type four-disulfide core domains. Members of the family include whey ...
 30-50 8.91e-04

whey acidic protein-type four-disulfide core domains. Members of the family include whey acidic protein, elafin (elastase-specific inhibitor), caltrin-like protein (a calcium transport inhibitor) and other extracellular proteinase inhibitors. A group of proteins containing 8 characteristically-spaced cysteine residuesforming disulphide bonds, have been termed '4-disulphide core' proteins. Protease inhibition occurs by insertion of the inhibitory loop into the active site pocket and interference with the catalytic residues of the protease.


Pssm-ID: 238120 [Multi-domain]  Cd Length: 60  Bit Score: 37.43  E-value: 8.91e-04
                         10        20
                 ....*....|....*....|.
gi 223642446  30 CSADSHCPEDKPCCsqFGICG 50
Cdd:cd00199   35 CSSDSDCPGDKKCC--ENGCG 53
ChtBD1 smart00270
Chitin binding domain;
36-59 1.17e-03

Chitin binding domain;


Pssm-ID: 214593  Cd Length: 38  Bit Score: 36.58  E-value: 1.17e-03
                           10        20
                   ....*....|....*....|....*
gi 223642446    36 CPeDKPCCSQFGICGTGA-YCLGGC 59
Cdd:smart00270  11 CP-NNLCCSQFGYCGSGDeYCGRGC 34
GH16_beta_GRP cd02179
beta-1,3-glucan recognition protein, member of glycosyl hydrolase family 16; Beta-GRP (beta-1, ...
 209-263 1.66e-03

beta-1,3-glucan recognition protein, member of glycosyl hydrolase family 16; Beta-GRP (beta-1,3-glucan recognition protein) is one of several pattern recognition receptors (PRRs), also referred to as biosensor proteins, that complexes with pathogen-associated beta-1,3-glucans and then transduces signals necessary for activation of an appropriate innate immune response. They are present in insects and lack all catalytic residues. This subgroup also contains related proteins of unknown function that still contain the active site. Their structures adopt a jelly roll fold with a deep active site channel harboring the catalytic residues, like those of other glycosyl hydrolase family 16 members.


Pssm-ID: 185688 [Multi-domain]  Cd Length: 321  Bit Score: 40.44  E-value: 1.66e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 223642446 209 YHNYEMDWTEDKIDWYVDGEKVRTLNKKDTwnetsnrfDYPQTPSRIQFSLWPGG 263
Cdd:cd02179  202 FHVYTLEWKPDGITLMVDGEEYGEIEPGEG--------GYSEAANNPAASRWLGG 248
WAP smart00217
Four-disulfide core domains;
30-50 4.84e-03

Four-disulfide core domains;


Pssm-ID: 197580 [Multi-domain]  Cd Length: 47  Bit Score: 35.04  E-value: 4.84e-03
                           10        20
                   ....*....|....*....|.
gi 223642446    30 CSADSHCPEDKPCCsqFGICG 50
Cdd:smart00217  22 CSSDSQCPGVKKCC--FNGCG 40
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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