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Conserved domains on  [gi|2321890010|emb|CAI3811260|]
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ATP synthase subunit a [Pseudomonas sp. MM221]

Protein Classification

FoF1 ATP synthase subunit a( domain architecture ID 10012597)

FoF1 ATP synthase subunit a is part of the membrane proton channel of the F-type ATPase that produces ATP from ADP in the presence of a proton gradient across the membrane; it plays a direct role in the translocation of protons across the membrane

Gene Ontology:  GO:0045263|GO:0046933|GO:0005886
PubMed:  28001127

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 39-289 8.51e-75

F0F1 ATP synthase subunit A; Validated


:

Pssm-ID: 235617  Cd Length: 227  Bit Score: 228.14  E-value: 8.51e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010  39 MGFWAFHLDTLGWSVALGLIFLFIFRMAAKKATSGQPGGLQNFVEVMVDFVNGSVKDSFHGRSPVIAPLALTIFVWVFLM 118
Cdd:PRK05815    7 IGFGGFNFDSLLLSVLLGVLILLLFALVATRKLSGVPGGLQNFVEMIVEFVRGQVKDNIGGKGKKFAPLAFTLFLFILLM 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010 119 NAVDLVPVDWIPqlailisgdphipfravSTTDPNATLAMAFCVFALIIFYSIKVKGLGGFIGELTLHPFgsknifvqIL 198
Cdd:PRK05815   87 NLLGLIPYLLFP-----------------PTADINVTLALALIVFVLVIYYGIKKKGLGGYLKEFYLQPH--------PL 141

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010 199 LIPvnflLEFVTLIAKPISLALRLFGNMYAGELVFILIAVMFGSGlLWLSGLGVVLQWAWAVFHILIITLQAFIFMMLTI 278
Cdd:PRK05815  142 LLP----IEIISEFSRPISLSLRLFGNMLAGELILALIALLGGAG-LLLALAPLILPVAWTIFEIFVGTLQAYIFMMLTI 216

                         250
                  ....*....|.
gi 2321890010 279 VYLSMAHEDNH 289
Cdd:PRK05815  217 VYISMAVEEEH 227
 
Name Accession Description Interval E-value
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 39-289 8.51e-75

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 228.14  E-value: 8.51e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010  39 MGFWAFHLDTLGWSVALGLIFLFIFRMAAKKATSGQPGGLQNFVEVMVDFVNGSVKDSFHGRSPVIAPLALTIFVWVFLM 118
Cdd:PRK05815    7 IGFGGFNFDSLLLSVLLGVLILLLFALVATRKLSGVPGGLQNFVEMIVEFVRGQVKDNIGGKGKKFAPLAFTLFLFILLM 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010 119 NAVDLVPVDWIPqlailisgdphipfravSTTDPNATLAMAFCVFALIIFYSIKVKGLGGFIGELTLHPFgsknifvqIL 198
Cdd:PRK05815   87 NLLGLIPYLLFP-----------------PTADINVTLALALIVFVLVIYYGIKKKGLGGYLKEFYLQPH--------PL 141

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010 199 LIPvnflLEFVTLIAKPISLALRLFGNMYAGELVFILIAVMFGSGlLWLSGLGVVLQWAWAVFHILIITLQAFIFMMLTI 278
Cdd:PRK05815  142 LLP----IEIISEFSRPISLSLRLFGNMLAGELILALIALLGGAG-LLLALAPLILPVAWTIFEIFVGTLQAYIFMMLTI 216

                         250
                  ....*....|.
gi 2321890010 279 VYLSMAHEDNH 289
Cdd:PRK05815  217 VYISMAVEEEH 227
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 47-287 1.20e-68

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 211.86  E-value: 1.20e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010  47 DTLGWSVALGLIFLFIFRMAAKKAtSGQPGGLQNFVEVMVDFVNGSVKDSFHGRSPVIAPLALTIFVWVFLMNAVDLvpv 126
Cdd:COG0356     1 DTVLMSWLAMLLLLLLFLLATRKL-KLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGL--- 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010 127 dwipqlailisgdphIPFRAVSTTDPNATLAMAFCVFALIIFYSIKVKGLGGFIGELTLHPFGsknifvqiLLIPVNFLL 206
Cdd:COG0356    77 ---------------IPGLFPPTADINVTLALALIVFVLVHYYGIKKKGLGGYLKHLFFPPFP--------WLAPLMLPI 133

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010 207 EFVTLIAKPISLALRLFGNMYAGELVFILIAVMFGSGLLWLsgLGVVLQWAWAVFHILIITLQAFIFMMLTIVYLSMAHE 286
Cdd:COG0356   134 EIISELARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGV--LSLLLPVAWTAFELLVGFLQAYIFTMLTAVYISLAVE 211


                  .
gi 2321890010 287 D 287
Cdd:COG0356   212 E 212
ATP-synt_A pfam00119
ATP synthase A chain;
51-282 1.11e-57

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 184.23  E-value: 1.11e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010  51 WSVALGLIFLFIFRMAAKKATSGQPGGLQNFVEVMVDFVNGSVKDSFHGRS-PVIAPLALTIFVWVFLMNAVDLVPVdwi 129
Cdd:pfam00119   3 MSLIVALILLLFLLLATRKTKKLVPGRLQNFVEMLVEFVDNIVKDNIGKKKgRKFFPLLLTLFFFILVSNLLGLIPK--- 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010 130 pqlailisgdphIPFRAVSTTDPNATLAMAFCVFALIIFYSIKVKGLGGFIGELTLHPfgsknifVQILLIPVNFLLEFV 209
Cdd:pfam00119  80 ------------SPGGFTVTADINVTLALALIVFLLVHYYGIKKHGLGGYFKKLFVPP-------VPLPLVPLLLPIEII 140

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2321890010 210 TLIAKPISLALRLFGNMYAGELVFILIAVM---FGSGLLWLSGLGVVLQWAWAVFHILIITLQAFIFMMLTIVYLS 282
Cdd:pfam00119 141 SEFARPVSLSLRLFGNMLAGHLLLLLLAGLifaLLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 41-282 1.54e-33

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 121.93  E-value: 1.54e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010  41 FWAFHLDTLGWSVALGLIFLFIFRMAAKKATsgqPGGLQNFVEVMVDFVNGSVKDSFHGRSPVIAPLALTIFVWVFLMNA 120
Cdd:TIGR01131  10 ITLFSLTLLSLILLLSLLIFLISSSLSRWLI---PSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFILISNL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010 121 VDLvpvdwipqlailisgdphIPFRAVSTTDPNATLAMAFCVFALIIFYSIKVKGLGGFIGeltLHPFGSKNIfvqilLI 200
Cdd:TIGR01131  87 LGL------------------IPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAH---LVPSGTPLP-----LI 140

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010 201 PVNFLLEFVTLIAKPISLALRLFGNMYAGELVFILIAVM-FGSGLLWLSGLGVVLQWAWAVFHILIITLQAFIFMMLTIV 279
Cdd:TIGR01131 141 PFLVIIETISYLARPISLSVRLFANISAGHLLLTLLSGLlFSLMSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCL 220


                  ...
gi 2321890010 280 YLS 282
Cdd:TIGR01131 221 YLN 223
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 105-282 4.80e-28

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 105.56  E-value: 4.80e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010 105 APLALTIFVWVFLMNAVDLvpvdwipqlailisgdphIPFRAVSTTDPNATLAMAFCVFALIIFYSIKVKGLGGFigeLT 184
Cdd:cd00310     5 LPLLGTLFLFILFSNLLGL------------------IPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFF---LH 63

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010 185 LHPFGSKnifvqILLIPVNFLLEFVTLIAKPISLALRLFGNMYAGELVFILIAVMFGSGLLWLSGLGVVLQWAWAVFHIL 264
Cdd:cd00310    64 FLPPGTP-----LPLAPLMVPIELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELF 138

                         170
                  ....*....|....*...
gi 2321890010 265 IITLQAFIFMMLTIVYLS 282
Cdd:cd00310   139 VAFIQAYVFTLLTAVYIS 156
 
Name Accession Description Interval E-value
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 39-289 8.51e-75

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 228.14  E-value: 8.51e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010  39 MGFWAFHLDTLGWSVALGLIFLFIFRMAAKKATSGQPGGLQNFVEVMVDFVNGSVKDSFHGRSPVIAPLALTIFVWVFLM 118
Cdd:PRK05815    7 IGFGGFNFDSLLLSVLLGVLILLLFALVATRKLSGVPGGLQNFVEMIVEFVRGQVKDNIGGKGKKFAPLAFTLFLFILLM 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010 119 NAVDLVPVDWIPqlailisgdphipfravSTTDPNATLAMAFCVFALIIFYSIKVKGLGGFIGELTLHPFgsknifvqIL 198
Cdd:PRK05815   87 NLLGLIPYLLFP-----------------PTADINVTLALALIVFVLVIYYGIKKKGLGGYLKEFYLQPH--------PL 141

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010 199 LIPvnflLEFVTLIAKPISLALRLFGNMYAGELVFILIAVMFGSGlLWLSGLGVVLQWAWAVFHILIITLQAFIFMMLTI 278
Cdd:PRK05815  142 LLP----IEIISEFSRPISLSLRLFGNMLAGELILALIALLGGAG-LLLALAPLILPVAWTIFEIFVGTLQAYIFMMLTI 216

                         250
                  ....*....|.
gi 2321890010 279 VYLSMAHEDNH 289
Cdd:PRK05815  217 VYISMAVEEEH 227
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 47-287 1.20e-68

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 211.86  E-value: 1.20e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010  47 DTLGWSVALGLIFLFIFRMAAKKAtSGQPGGLQNFVEVMVDFVNGSVKDSFHGRSPVIAPLALTIFVWVFLMNAVDLvpv 126
Cdd:COG0356     1 DTVLMSWLAMLLLLLLFLLATRKL-KLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGL--- 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010 127 dwipqlailisgdphIPFRAVSTTDPNATLAMAFCVFALIIFYSIKVKGLGGFIGELTLHPFGsknifvqiLLIPVNFLL 206
Cdd:COG0356    77 ---------------IPGLFPPTADINVTLALALIVFVLVHYYGIKKKGLGGYLKHLFFPPFP--------WLAPLMLPI 133

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010 207 EFVTLIAKPISLALRLFGNMYAGELVFILIAVMFGSGLLWLsgLGVVLQWAWAVFHILIITLQAFIFMMLTIVYLSMAHE 286
Cdd:COG0356   134 EIISELARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGV--LSLLLPVAWTAFELLVGFLQAYIFTMLTAVYISLAVE 211


                  .
gi 2321890010 287 D 287
Cdd:COG0356   212 E 212
ATP-synt_A pfam00119
ATP synthase A chain;
51-282 1.11e-57

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 184.23  E-value: 1.11e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010  51 WSVALGLIFLFIFRMAAKKATSGQPGGLQNFVEVMVDFVNGSVKDSFHGRS-PVIAPLALTIFVWVFLMNAVDLVPVdwi 129
Cdd:pfam00119   3 MSLIVALILLLFLLLATRKTKKLVPGRLQNFVEMLVEFVDNIVKDNIGKKKgRKFFPLLLTLFFFILVSNLLGLIPK--- 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010 130 pqlailisgdphIPFRAVSTTDPNATLAMAFCVFALIIFYSIKVKGLGGFIGELTLHPfgsknifVQILLIPVNFLLEFV 209
Cdd:pfam00119  80 ------------SPGGFTVTADINVTLALALIVFLLVHYYGIKKHGLGGYFKKLFVPP-------VPLPLVPLLLPIEII 140

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2321890010 210 TLIAKPISLALRLFGNMYAGELVFILIAVM---FGSGLLWLSGLGVVLQWAWAVFHILIITLQAFIFMMLTIVYLS 282
Cdd:pfam00119 141 SEFARPVSLSLRLFGNMLAGHLLLLLLAGLifaLLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 41-282 1.54e-33

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 121.93  E-value: 1.54e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010  41 FWAFHLDTLGWSVALGLIFLFIFRMAAKKATsgqPGGLQNFVEVMVDFVNGSVKDSFHGRSPVIAPLALTIFVWVFLMNA 120
Cdd:TIGR01131  10 ITLFSLTLLSLILLLSLLIFLISSSLSRWLI---PSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFILISNL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010 121 VDLvpvdwipqlailisgdphIPFRAVSTTDPNATLAMAFCVFALIIFYSIKVKGLGGFIGeltLHPFGSKNIfvqilLI 200
Cdd:TIGR01131  87 LGL------------------IPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAH---LVPSGTPLP-----LI 140

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010 201 PVNFLLEFVTLIAKPISLALRLFGNMYAGELVFILIAVM-FGSGLLWLSGLGVVLQWAWAVFHILIITLQAFIFMMLTIV 279
Cdd:TIGR01131 141 PFLVIIETISYLARPISLSVRLFANISAGHLLLTLLSGLlFSLMSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCL 220


                  ...
gi 2321890010 280 YLS 282
Cdd:TIGR01131 221 YLN 223
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 105-282 4.80e-28

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 105.56  E-value: 4.80e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010 105 APLALTIFVWVFLMNAVDLvpvdwipqlailisgdphIPFRAVSTTDPNATLAMAFCVFALIIFYSIKVKGLGGFigeLT 184
Cdd:cd00310     5 LPLLGTLFLFILFSNLLGL------------------IPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFF---LH 63

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010 185 LHPFGSKnifvqILLIPVNFLLEFVTLIAKPISLALRLFGNMYAGELVFILIAVMFGSGLLWLSGLGVVLQWAWAVFHIL 264
Cdd:cd00310    64 FLPPGTP-----LPLAPLMVPIELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELF 138

                         170
                  ....*....|....*...
gi 2321890010 265 IITLQAFIFMMLTIVYLS 282
Cdd:cd00310   139 VAFIQAYVFTLLTAVYIS 156
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 52-289 1.25e-18

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 84.41  E-value: 1.25e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010  52 SVALGLIFLFIFRMAAKKATSGQPGGLQNFVEVMVDFVNGSVKDSFHGRS-PVIAPLALTIFVWVFLMNAVDLvpvdwip 130
Cdd:PRK13419  117 SAILLVVFLAAGRKYKKMTKSQAPKGLANAMEALVEFIRLDVAKSNIGHGyEKFLPYLLTVFFFILVCNLLGL------- 189

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010 131 qlailisgdphIPFRAVSTTDPNATLAMAFCVFALIIFYSIKVKGLGGFIGELTlhpfGSKNIFVQILLIPVnfllEFVT 210
Cdd:PRK13419  190 -----------VPYGATATGNINVTLTLAVFTFFITQYAAIKAHGIKGYLAHLT----GGTHWSLWIIMIPI----EFIG 250

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010 211 LIAKPISLALRLFGNMYAGELVFI-LIAVMFGSGLLWLSglgVVLQWAWAVF----HILIITLQAFIFMMLTIVYLSMA- 284
Cdd:PRK13419  251 LFTKPFALTVRLFANMTAGHIVILsLIFISFILKSYIVA---VAVSVPFAIFiyllELFVAFLQAYIFTMLSALFIGLAt 327


                  ....*....
gi 2321890010 285 ----HEDNH 289
Cdd:PRK13419  328 ahegHDEEH 336
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 57-282 3.08e-10

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 58.99  E-value: 3.08e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010  57 LIFLFIFRMAAKKATSGQPGGLQNFVEVMVDFVNGSVKDSFHGRSPVIAPLALTIFVWVFLMNAVDLVPVDWIPqlaili 136
Cdd:PRK13420   27 MIVLVLASWLTTRRLSLDPGRFQVALEGVVSTIEDAIKEVLPRHARLVLPFVGTLWIFILVANLIGLIPGFHSP------ 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010 137 sgdphipfravsTTDPNATLAMAFCVFALIIFYSIKVKGLGGFIGELtlhpfgsknifvqilLIPVNFLLEF--VTLIAK 214
Cdd:PRK13420  101 ------------TADLSVTAALALLVFFSVHWFGIRAEGLREYLKHY---------------LSPSPFLLPFhlISEITR 153

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2321890010 215 PISLALRLFGNMYAGELVFILIAVMFGsgllWLSGLGVVLqwawavFHILIITLQAFIFMMLTIVYLS 282
Cdd:PRK13420  154 TLALAVRLFGNIMSLELAALLVLLVAG----FLVPVPILM------LHIIEALVQAYIFGMLALIYIA 211
PRK13421 PRK13421
F0F1 ATP synthase subunit A; Provisional
 75-289 6.94e-10

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237383  Cd Length: 223  Bit Score: 57.78  E-value: 6.94e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010  75 PGGLQNFVEVMVDFVNGSVKDSFHGRSPVIAPLALTIFVWVFLMNAVDLVPvdwipqlailisgdphipfravSTTDPNA 154
Cdd:PRK13421   48 PGRLQSVLELVVTTIDAQIRDTMQTDPAPYRALIGTLFLFVLVANWSSLVP----------------------GVEPPTA 105

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010 155 TL----AMAFCVFALIIFYSIKVKGLGGFigeltLHPFGSKNifvqILLIPVNFLLEfvtlIAKPISLALRLFGNMYAGE 230
Cdd:PRK13421  106 HLetdaALALIVFLATIYYGVRARGVRGY-----LATFAEPT----WVMIPLNLVEQ----LTRTFSLIVRLFGNVMSGV 172

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2321890010 231 LVFILIavmfgsglLWLSGLGVVLqwAWAVFHILIITLQAFIFMMLTIVYLSMAHEDNH 289
Cdd:PRK13421  173 FVIGIV--------LSLAGLLVPI--PLMALDLLTGAVQAYIFAVLAMVFIGAAVSDDE 221
atpI CHL00046
ATP synthase CF0 A subunit
 75-232 4.82e-08

ATP synthase CF0 A subunit


Pssm-ID: 176987  Cd Length: 228  Bit Score: 52.63  E-value: 4.82e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010  75 PGGLQNFVEVMVDFVNGSVKDSFHGR-----SPVIAPLALTIFVWvflmnavdlvpvDW----IPQLAILIsgdPHIPFr 145
Cdd:CHL00046   51 PTGGQNFFEYVLEFIRDLAKTQIGEEeyrpwVPFIGTMFLFIFVS------------NWsgalLPWKLIEL---PHGEL- 114

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010 146 AVSTTDPNATLAMAFCVFALIIFYSIKVKGLGGFIGELTLHPFgsknifvqilLIPVNFLLEFvtliAKPISLALRLFGN 225
Cdd:CHL00046  115 AAPTNDINTTVALALLTSVAYFYAGLSKKGLGYFGKYIQPTPI----------LLPINILEDF----TKPLSLSFRLFGN 180


                  ....*..
gi 2321890010 226 MYAGELV 232
Cdd:CHL00046  181 ILADELV 187
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 197-282 1.88e-07

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 50.80  E-value: 1.88e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010 197 ILLIPVNFLLEFVTLIAKPISLALRLFGNMYAGELVFILIAVMFG----SGLLWLSGLGVVlQWAWAVFHILIITLQAFI 272
Cdd:MTH00176  138 PLLNPFLVLIELVSLLIRPLTLAVRLAANLSAGHLLLGLLGAAMWgllpVSPLIGFLLLIV-QILYFMFEIAVCMIQAYV 216

                          90
                  ....*....|
gi 2321890010 273 FMMLTIVYLS 282
Cdd:MTH00176  217 FTLLLSLYLD 226
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 57-281 9.41e-06

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 45.80  E-value: 9.41e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010  57 LIFLFIFRMAAKKATSGQPGGLQNFVEVMVDFVNGSVKDSFHGRSPVIAPLALTIFVWVFLMNAVDLVPVDWIPQLAILI 136
Cdd:MTH00172   24 MILVIIVVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFIISLFFFIVFLNLLGLFPYVFTPTTHIVV 103

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010 137 sgdphipfravsttdpnaTLAMAFCvfaliIFYSIKVKGLGGFIGEL--TLHPFGSKnifvqILLIPVNFLLEFVTLIAK 214
Cdd:MTH00172  104 ------------------TLGLSFS-----IIIGVTLAGFWRFKWDFfsILMPSGAP-----LGLAPLLVLIETVSYISR 155

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2321890010 215 PISLALRLFGNMYAGELVFILIAvMFGSGLLWLSGLGVVLQWAWAVFHIL----IITLQAFIFMMLTIVYL 281
Cdd:MTH00172  156 AISLGVRLAANLSAGHLLFAILA-GFGFNMLCASGFLSLFPLLIMVFITLleiaVAVIQAYVFCLLTTIYL 225
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 198-280 3.00e-05

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 44.09  E-value: 3.00e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010 198 LLIPVNFLLEFVTLIAKPISLALRLFGNMYAGELVFILIAVMFGSGLLWLS----GLGVVLQWAWAVFHILIITLQAFIF 273
Cdd:MTH00173  139 GLNPFLVLIETVSILIRPLTLTVRLLANISAGHIVLTLIGNYLSSSLFSSSvvslLLVLLIQVGYFIFEVAVMLIQAYIF 218


                  ....*..
gi 2321890010 274 MMLTIVY 280
Cdd:MTH00173  219 TLLIKLY 225
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 48-284 4.28e-05

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 44.50  E-value: 4.28e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010  48 TLGWSVALgliFLFIFRMAAKKATSGQPGGLQ----NFVEVMVDFVNGSVKD-SFHGRSPVIAPLALTIFVWVFLMNAVD 122
Cdd:PRK13417   99 TMMWIVAF---FLFLIFIPAANIIAKNPLKVQsrfaNTVEVFVNFLRKDIVDeSMHGHGHSYYHYIFTLFFFILFCNLMG 175

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010 123 LVP-----------VDWIPQLAILISGDPHIPFRA------VSTTDPNATLAMAFCVFALIIFYSIKVKGLGgFIGELTl 185
Cdd:PRK13417  176 LVPsvgeltvvasdYGGLVALGVMDHTPHALPTFAkvwsgiTVTGDISVTMTLALLTMFLIYGAGFSYQGPK-FIWHSV- 253

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010 186 hPFGsknifVQILLIPVNFLLEF-VTLIAKPISLALRLFGNMYAGELVFI-LIAVMFGS---GLLWLSGLGVVLQWawaV 260
Cdd:PRK13417  254 -PNG-----VPLLLYPIMWPLEFiVSPMAKTFALTVRLLANMTAGHVIILaLMGFIFQFqswGIVPVSVIGSGLIY---V 324

                         250       260
                  ....*....|....*....|....
gi 2321890010 261 FHILIITLQAFIFMMLTIVYLSMA 284
Cdd:PRK13417  325 LEIFVAFLQAYIFVLLTSLFVGLS 348
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 195-282 1.57e-04

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 42.30  E-value: 1.57e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010 195 VQILLIPVNFLLEFVTLIAKPISLALRLFGNMYAGELVFILIA----VMFGSGLLWLSGLGVVLQWAWAVFHILIITLQA 270
Cdd:MTH00175  147 APLVLAPFLVLIETLSYLIRAISLGVRLAANISAGHLLFAILSgfafNMLSNGLIILSLFPMLIMIFITLLEMAVAVIQA 226

                          90
                  ....*....|..
gi 2321890010 271 FIFMMLTIVYLS 282
Cdd:MTH00175  227 YVFCLLTTIYLG 238
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 197-282 2.74e-04

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 41.31  E-value: 2.74e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010 197 ILLIPVNFLLEFVTLIAKPISLALRLFGNMYAGELVFILIAVMFGSGLLWLSGLGVVLQWAWAVFHILIITLQAFIFMML 276
Cdd:MTH00157  135 PILMPFMVLIETISNLIRPGTLAVRLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVL 214


                  ....*.
gi 2321890010 277 TIVYLS 282
Cdd:MTH00157  215 STLYSS 220
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 199-280 3.43e-03

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 38.18  E-value: 3.43e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010 199 LIPVNFLLEFVTLIAKPISLALRLFGNMYAGELVFILIAVMFGSGLLWlSGLGVVLQWAWAVFHIL----IITLQAFIFM 274
Cdd:MTH00005  142 LNPFLVLIETISILVRPITLSFRLAANMSAGHIVLSLIGIYAASALFS-SISSTILLILTQMGYILfevgICLIQAYIFC 220


                  ....*.
gi 2321890010 275 MLTIVY 280
Cdd:MTH00005  221 LLLSLY 226
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 199-281 3.59e-03

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 38.00  E-value: 3.59e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2321890010 199 LIPVNFLLEFVTLIAKPISLALRLFGNMYAGELVFILIAV----MFGSGLLWLSGLGVVLQWAWAVFHILIITLQAFIFM 274
Cdd:MTH00174  159 LAPLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASfawkMINTGILIGSFVPFAILIFVTILEMAVAIIQAYVFT 238


                  ....*..
gi 2321890010 275 MLTIVYL 281
Cdd:MTH00174  239 LLTIVYL 245
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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